{"type": "FeatureCollection", "features": [{"id": "10.1016/j.jhazmat.2021.125292", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:16:27Z", "type": "Journal Article", "created": "2021-02-05", "title": "Reactive-transport modelling of Enterococcus faecalis JH2-2 passage through water saturated sediment columns", "description": "The reuse of treated wastewater (e.g. for irrigation) is a common practice to combat water scarcity problems world-wide. However, the potential spread of opportunistic pathogens and fecal contaminants like Enterococci within the subsoil could pose serious health hazards. Additional sources (e.g., leaky sewer systems, livestock farming) aggravate this situation. This study contributes to an understanding of pathogen spread in the environment, using a combined modelling and experimental approach. The impact of quartz sediment and certain wastewater characteristics on the dissemination of Enterococcus faecalis JH2-2 is investigated. The transport processes of advection-dispersion and straining were studied by injecting conservative saline tracer and fluorescent microspheres through sediment packed columns, and evaluating resulting breakthrough curves using models. Similarly, simultaneously occurring reactive processes of microbial attachment, decay, respiration and growth were studied by injecting Enterococcus faecalis JH2-2 suspended in water with or without dissolved oxygen (DO) and nutrients through sediment, and evaluating resulting inlet and outlet concentration curves. The processes of straining, microbial decay and growth, were important when DO was absent. Irreversible attachment was important when DO was present. Sensitivity analysis of each parameter was conducted, and field scale behavior of the processes was predicted, to facilitate future work.", "keywords": ["Physical Phenomena", "13. Climate action", "Enterococcus faecalis", "Water Movements", "0207 environmental engineering", "Water", "02 engineering and technology", "01 natural sciences", "Enterococcus", "6. Clean water", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.jhazmat.2021.125292"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Hazardous%20Materials", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jhazmat.2021.125292", "name": "item", "description": "10.1016/j.jhazmat.2021.125292", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jhazmat.2021.125292"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-07-01T00:00:00Z"}}, {"id": "10.1016/j.jhydrol.2021.126551", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:16:28Z", "type": "Journal Article", "created": "2021-06-08", "title": "Smartphone-based tension disc infiltrometer for soil hydraulic characterisation", "description": "31 Pags.- 18 Figs.- 1 Tabl.  The definitive version is available at: https://www.sciencedirect.com/science/journal/00221694 The tension disc infiltrometer has become a widespread method to measure soil hydraulic properties under unsaturated conditions. Although several automated devices have been developed, most designs include an elongated water reservoir and a pressure transducer with electronic components to register the water level, increasing its cost and limiting its application. The objective of this work is to present a new tension disc infiltrometer with a compact design of 10 cm diameter and height, where the water level is monitored by a smartphone camera. The infiltration curve is determined from the automated analysis of the images recorded by the smartphone without additional electronic components. The device was first validated in the laboratory by comparing visual measurements (V), the camera imagery (Ca) and a pressure transducer (PT). Next, it was tested on field infiltration experiments. Robust fits (R2 = 0.99) were found between the water level measured with Ca in the laboratory and those obtained with V and PT procedures. The Ca method is accurate, robust and independent of the relative camera position. Good fits were also observed between Ca water level and those obtained with PT in the field experiments. Similar hydraulic conductivity and sorptivity values were obtained with both sensors using the numerical solution of the Haverkamp (NSH) equation. The compact infiltrometer, in conjunction with the smartphone camera, is an accurate, accessible, portable and easy-to-use field-based device for soil hydraulic characterisation. This research was supported by the MINECO project ASBIO (PGC2018-094332-B-100) and the European Union\u2019s Horizon 2020 research and innovation program under grant agreement No [H2020-MSCA-RISE-777803]. Peer reviewed", "keywords": ["Automated single-ring infiltrometer", "Compact design", "0207 environmental engineering", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "02 engineering and technology", "Soil hydraulic properties", "Infiltration rate measurements", "NSH", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.jhydrol.2021.126551"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Hydrology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jhydrol.2021.126551", "name": "item", "description": "10.1016/j.jhydrol.2021.126551", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jhydrol.2021.126551"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2023.169662", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:16:37Z", "type": "Journal Article", "created": "2023-12-28", "title": "Plant-mediated CH4 exchange in wetlands: A review of mechanisms and measurement methods with implications for modelling", "description": "Plant-mediated CH4 transport (PMT) is the dominant pathway through which soil-produced CH4 can escape into the atmosphere and thus plays an important role in controlling ecosystem CH4 emission. PMT is affected by abiotic and biotic factors simultaneously, and the effects of biotic factors, such as the dominant plant species and their traits, can override the effects of abiotic factors. Increasing evidence shows that plant-mediated CH4 fluxes include not only PMT, but also within-plant CH4 production and oxidation due to the detection of methanogens and methanotrophs attached to the shoots. Despite the inter-species and seasonal differences, and the probable contribution of within-plant microbes to total plant-mediated CH4 exchange (PME), current process-based ecosystem models only estimate PMT based on the bulk biomass or leaf area index of aerenchymatous plants. We highlight five knowledge gaps to which more research efforts should be devoted. First, large between-species variation, even within the same family, complicates general estimation of PMT, and calls for further work on the key dominant species in different types of wetlands. Second, the interface (rhizosphere-root, root-shoot, or leaf-atmosphere) and plant traits controlling PMT remain poorly documented, but would be required for generalizations from species to relevant functional groups. Third, the main environmental controls of PMT across species remain uncertain. Fourth, the role of within-plant CH4 production and oxidation is poorly quantified. Fifth, the simplistic description of PMT in current process models results in uncertainty and potentially high errors in predictions of the ecosystem CH4 flux. Our review suggest that flux measurements should be conducted over multiple growing seasons and be paired with trait assessment and microbial analysis, and that trait-based models should be developed. Only then we are capable to accurately estimate plant-mediated CH4 emissions, and eventually ecosystem total CH4 emissions at both regional and global scales.", "keywords": ["Drivers", "330", "Plants", "Carbon Dioxide", "metaani", "Modelling", "Processes", "Soil", "Wetland plants", "Wetlands", "Mechanisms", "suot", "suokasvillisuus", "Plant CH4 transport", "Biomass", "Methane", "Ecosystem"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2023.169662"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2023.169662", "name": "item", "description": "10.1016/j.scitotenv.2023.169662", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2023.169662"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-03-01T00:00:00Z"}}, {"id": "10.1073/pnas.2113148118", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:17:33Z", "type": "Journal Article", "created": "2021-09-14", "title": "Microbial self-recycling and biospherics", "description": "Microbes are well known as potent recyclers of leftover biomass in ecosystems, preventing nutrient cycles from simply getting stuck (1). However, a lot less is known about how microbes can recycle themselves, their own biomass. This is highly relevant, because microbes don\u2019t often find themselves in front of a lavish buffet, but rather have to eke out a living at the edge of nutrient and energy starvation. In their paper in PNAS, Shoemaker et al. (2) examine the ability of populations of bacteria to recycle their own biomass, elegantly combining long-term experiments with modeling. The authors enclosed 100 populations from 21 different taxa individually and followed their fate for 3 y\u2014all in the absence of matter or energy inputs. They find that almost all populations (except for one) survived, with extinction times estimated often in decades and far exceeding what would be expected from individual longevity under conditions of resource limitation. Thus, in many of the bacterial strains, when individuals die, living individuals can use the dead biomass of other individuals to increase their own survival and reproduction, thus greatly prolonging population persistence.  These results are relevant to many questions in environmental microbiology. For example, this recycling ability, and thus the ability to maintain oneself during periods of adversity, may be part of the remarkable \u2026   [\u21b5][1]1To whom correspondence may be addressed. Email: rillig{at}zedat.fu-berlin.de.   [1]: #xref-corresp-1-1", "keywords": ["2. Zero hunger", "15. Life on land", "Ecological Systems", " Closed", "Life Support Systems", "12. Responsible consumption", "3. Good health"]}, "links": [{"href": "https://pnas.org/doi/pdf/10.1073/pnas.2113148118"}, {"href": "https://doi.org/10.1073/pnas.2113148118"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20National%20Academy%20of%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1073/pnas.2113148118", "name": "item", "description": "10.1073/pnas.2113148118", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1073/pnas.2113148118"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-07T00:00:00Z"}}, {"id": "10.1111/gcb.12819", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:18:00Z", "type": "Journal Article", "created": "2014-12-05", "title": "Soil Warming And Co2 Enrichment Induce Biomass Shifts In Alpine Tree Line Vegetation", "description": "Abstract<p>Responses of alpine tree line ecosystems to increasing atmospheric CO2 concentrations and global warming are poorly understood. We used an experiment at the Swiss tree line to investigate changes in vegetation biomass after 9\uffc2\uffa0years of free air CO2 enrichment (+200\uffc2\uffa0ppm; 2001\uffe2\uff80\uff932009) and 6\uffc2\uffa0years of soil warming (+4\uffc2\uffa0\uffc2\uffb0C; 2007\uffe2\uff80\uff932012). The study contained two key tree line species, Larix decidua and Pinus uncinata, both approximately 40\uffc2\uffa0years old, growing in heath vegetation dominated by dwarf shrubs. In 2012, we harvested and measured biomass of all trees (including root systems), above\uffe2\uff80\uff90ground understorey vegetation and fine roots. Overall, soil warming had clearer effects on plant biomass than CO2 enrichment, and there were no interactive effects between treatments. Total plant biomass increased in warmed plots containing Pinus but not in those with Larix. This response was driven by changes in tree mass (+50%), which contributed an average of 84% (5.7\uffc2\uffa0kg\uffc2\uffa0m\uffe2\uff88\uff922) of total plant mass. Pinus coarse root mass was especially enhanced by warming (+100%), yielding an increased root mass fraction. Elevated CO2 led to an increased relative growth rate of Larix stem basal area but no change in the final biomass of either tree species. Total understorey above\uffe2\uff80\uff90ground mass was not altered by soil warming or elevated CO2. However, Vaccinium myrtillus mass increased with both treatments, graminoid mass declined with warming, and forb and nonvascular plant (moss and lichen) mass decreased with both treatments. Fine roots showed a substantial reduction under soil warming (\uffe2\uff88\uff9240% for all roots &lt;2\uffc2\uffa0mm in diameter at 0\uffe2\uff80\uff9320\uffc2\uffa0cm soil depth) but no change with CO2 enrichment. Our findings suggest that enhanced overall productivity and shifts in biomass allocation will occur at the tree line, particularly with global warming. However, individual species and functional groups will respond differently to these environmental changes, with consequences for ecosystem structure and functioning.</p>", "keywords": ["0106 biological sciences", "2. Zero hunger", "Models", " Statistical", "Temperature", "Larix", "Carbon Dioxide", "15. Life on land", "Pinus", "Global Warming", "01 natural sciences", "Soil", "Species Specificity", "13. Climate action", "Biomass", "Tundra", "Switzerland"]}, "links": [{"href": "https://doi.org/10.1111/gcb.12819"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.12819", "name": "item", "description": "10.1111/gcb.12819", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.12819"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-01-30T00:00:00Z"}}, {"id": "10.1111/gcb.70130", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:18:03Z", "type": "Journal Article", "created": "2025-03-18", "title": "What Are the Limits to the Growth of Boreal Fires?", "description": "ABSTRACT<p>Boreal forest regions, including East Siberia, have experienced elevated fire activity in recent years, leading to record\uffe2\uff80\uff90breaking greenhouse gas emissions and severe air pollution. However, our understanding of the factors that eventually halt fire spread and thus limit fire growth remains incomplete, hindering our ability to model their dynamics and predict their impacts. We investigated the locations and timing of 2.2 million fire stops\uffe2\uff80\uff94defined as 300\uffe2\uff80\uff89m unburned pixels along fire perimeters\uffe2\uff80\uff94across the vast East Siberian taiga. Fire stops were retrieved from remote sensing data covering over 27,000 individual fires that collectively burned 80 Mha between 2012 and 2022. Several geospatial datasets, including hourly fire weather data and landscape variables, were used to identify the factors contributing to individual fire stops. Our analysis attributed 87% of all fire stops to a statistically significant (p\uffe2\uff80\uff89&lt;\uffe2\uff80\uff890.01) change in one or more of these drivers, with fire\uffe2\uff80\uff90weather drivers limiting fire growth over time and landscape drivers constraining it across space. We found clear regional and temporal variations in the importance of these drivers. For instance, landscape drivers\uffe2\uff80\uff94such as less flammable land cover and the presence of roads\uffe2\uff80\uff94were key constraints on fire growth in southeastern Siberia, where the landscape is more populated and fragmented. In contrast, fire weather was the primary constraint on fire growth in the remote northern taiga. Additionally, in central Yakutia, a major fire hotspot in recent years, fuel limitations from previous fires increasingly restricted fire spread. The methodology we present is adaptable to other biomes and can be applied globally, providing a framework for future attribution studies on global fire growth limitations. In northeast Siberia, we found that with increasing droughts and heatwaves, remote northern fires could potentially grow even larger in the future, with major implications for the global carbon cycle and climate.</p", "keywords": ["Siberia", "Climate Change", "Taiga", "Remote Sensing Technology", "Life Science", "Weather", "Fires", "Research Article", "Wildfires"], "contacts": [{"organization": "Thomas A. J. Janssen, Sander Veraverbeke,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1111/gcb.70130"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.70130", "name": "item", "description": "10.1111/gcb.70130", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.70130"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-03-01T00:00:00Z"}}, {"id": "10.1111/gcbb.12255", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:18:04Z", "type": "Journal Article", "created": "2015-02-19", "title": "Bioenergy Harvest, Climate Change, And Forest Carbon In The Oregon Coast Range", "description": "Abstract<p>Forests provide important ecological, economic, and social services, and recent interest has emerged in the potential for using residue from timber harvest as a source of renewable woody bioenergy. The long\uffe2\uff80\uff90term consequences of such intensive harvest are unclear, particularly as forests face novel climatic conditions over the next century. We used a simulation model to project the long\uffe2\uff80\uff90term effects of management and climate change on above\uffe2\uff80\uff90 and belowground forest carbon storage in a watershed in northwestern Oregon. The multi\uffe2\uff80\uff90ownership watershed has a diverse range of current management practices, including little\uffe2\uff80\uff90to\uffe2\uff80\uff90no harvesting on federal lands, short\uffe2\uff80\uff90rotation clear\uffe2\uff80\uff90cutting on industrial land, and a mix of practices on private nonindustrial land. We simulated multiple management scenarios, varying the rate and intensity of harvest, combined with projections of climate change. Our simulations project a wide range of total ecosystem carbon storage with varying harvest rate, ranging from a 45% increase to a 16% decrease in carbon compared to current levels. Increasing the intensity of harvest for bioenergy caused a 2\uffe2\uff80\uff933% decrease in ecosystem carbon relative to conventional harvest practices. Soil carbon was relatively insensitive to harvest rotation and intensity, and accumulated slowly regardless of harvest regime. Climate change reduced carbon accumulation in soil and detrital pools due to increasing heterotrophic respiration, and had small but variable effects on aboveground live carbon and total ecosystem carbon. Overall, we conclude that current levels of ecosystem carbon storage are maintained in part due to substantial portions of the landscape (federal and some private lands) remaining unharvested or lightly managed.\uffc2\uffa0Increasing the intensity of harvest for bioenergy on currently harvested land, however,\uffc2\uffa0led to a relatively small reduction in the ability of forests to store carbon. Climate change is unlikely to substantially alter carbon storage in these forests, absent shifts in disturbance regimes.</p>", "keywords": ["0106 biological sciences", "Carbon dioxide mitigation", "Forest ecology -- Oregon -- Oregon Coast Range", "Forest biomass", "13. Climate action", "Carbon cycle (Biogeochemistry)", "Biomass energy", "Forest Biology", "15. Life on land", "01 natural sciences", "7. Clean energy", "Climatic change", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/gcbb.12255"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcbb.12255", "name": "item", "description": "10.1111/gcbb.12255", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcbb.12255"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-05-25T00:00:00Z"}}, {"id": "10.1111/sum.12198", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:18:20Z", "type": "Journal Article", "created": "2015-07-31", "title": "Long-Term Effects Of Tillage, Nutrient Application And Crop Rotation On Soil Organic Matter Quality Assessed By Nmr Spectroscopy", "description": "Abstract<p>Crop and land management practices affect both the quality and quantity of soil organic matter (SOM) and hence are driving forces for soil organic carbon (SOC) sequestration. The objective of this study was to assess the long\uffe2\uff80\uff90term effects of tillage, fertilizer application and crop rotation onSOCin an agricultural area of southern Norway, where a soil fertility and crop rotation experiment was initiated in 1953 and a second experiment on tillage practices was initiated in 1983. The first experiment comprised 6\uffe2\uff80\uff90yr crop rotations with cereals only and 2\uffe2\uff80\uff90yr cereal and 4\uffe2\uff80\uff90yr grass rotations with recommended (base) and more than the recommended (above base) fertilizer application rates; the second experiment dealt with autumn\uffe2\uff80\uff90ploughed (conventional\uffe2\uff80\uff90till) plots and direct\uffe2\uff80\uff90drilled plots (no\uffe2\uff80\uff90till). Soil samples at 0\uffe2\uff80\uff9310 and 10\uffe2\uff80\uff9330\uffc2\uffa0cm depths were collected in autumn 2009 and analysed for their C and N contents. The quality ofSOMin the top layer was determined by13C solid\uffe2\uff80\uff90stateNMRspectroscopy. TheSOCstock did not differ significantly because of rotation or fertilizer application types, even after 56\uffc2\uffa0yr. However, the no\uffe2\uff80\uff90till system showed a significantly higherSOCstock than the conventional\uffe2\uff80\uff90till system at the 0\uffe2\uff80\uff9310\uffc2\uffa0cm depth after the 26\uffc2\uffa0yr of experiment, but it was not significantly different at the 10\uffe2\uff80\uff9330\uffc2\uffa0cm depth. In terms of quality,SOMwas found to differ by tillage type, rate of fertilizer application and crop rotation. The no\uffe2\uff80\uff90till system showed an abundance of O\uffe2\uff80\uff90alkyl C, while conventional\uffe2\uff80\uff90till system indicated an apparently indirect enrichment in alkyl C, suggesting a more advanced stage ofSOMdecomposition. The long\uffe2\uff80\uff90term quantitative and qualitative effects onSOMsuggest that adopting a no\uffe2\uff80\uff90tillage system and including grass in crop rotation and farmyard manure in fertilizer application may contribute to preserve soil fertility and mitigate climate change.</p>", "keywords": ["Fertilizer application", "2. Zero hunger", "Crop rotation", " fertilizer application", " soil organic carbon (SOC)", " soil organic matter (SOM)", " tillage", " NMR spectroscopy.", "NMR spectroscopy", "Crop rotation", "Soil organic matter (SOM)", "13. Climate action", "Soil organic carbon (SOC)", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Tillage"]}, "links": [{"href": "https://doi.org/10.1111/sum.12198"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Use%20and%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/sum.12198", "name": "item", "description": "10.1111/sum.12198", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/sum.12198"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-07-31T00:00:00Z"}}, {"id": "10.1186/s12302-025-01141-6", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:18:30Z", "type": "Journal Article", "created": "2025-06-15", "title": "Investigating the extent of PFAS contamination in the Upper Danube Basin across environmental compartments", "description": "Abstract                        Background             <p>Per- and polyfluoroalkyl substances (PFAS) are emerging organic pollutants widely detected in environmental systems, posing risks to human health and the ecosystem. Despite increasing efforts to monitor PFAS in river systems, knowledge gaps remain regarding sources and emissions via different pathways. This study investigates PFAS contamination across multiple environmental compartments in the Upper Danube Basin, including surface water, groundwater, wastewater, landfill leachate, surface runoff, and atmospheric deposition. The primary objectives are to assess the extent of PFAS contamination, identify key emission sources and transport pathways, and evaluate associated risks in terms of the potential exceedance of current and proposed environmental regulatory thresholds in the European Union.</p>                                   Results             <p>The findings reveal a widespread presence of PFAS, with PFOA, PFOS and short-chain compounds being predominant. The Alz River and Gendorf chemical park emerge as hotspots with far-reaching effects downstream, contributing significantly to diffuse legacy contamination of PFOA and being a significant source of two industrial PFOA substitutes, ADONA and GenX. Wastewater treatment plants, old municipal landfills, and sites with a history of fire-fighting foam application are identified as key pathways or sources of legacy pollution, exhibiting higher concentrations compared to the other matrices. Notably, no significant removal is observed when comparing influent and effluent samples from conventional WWTPs. The study further demonstrates that groundwater is vulnerable to contamination from point sources and to infiltration from rivers, with bank filtration proving largely ineffective in preventing PFAS contamination.</p>                                   Conclusions             <p>The study underscores the necessity for source and pathway control measures to mitigate PFAS pollution, the implementation of advanced treatment technologies to safeguard drinking water and surface water quality, and targeted remediation for legacy soil and groundwater contamination. Additionally, strong use regulations should be explored to minimize ongoing emissions. The multi-compartment monitoring proves to be a crucial approach to understand the complexity of PFAS distribution at the catchment scale. Comparative analysis and risk assessment highlight challenging situations for water management, offering an indispensable basis for emission modeling as a next step for quantitative assessment of the relevance of different sources and pathways for surface water pollution.</p>", "keywords": ["Emerging contaminants", "Emerging Pollutants", "PFAS", "Source identification", "Watershed management", "Environmental sciences", "Emission", "Water Framework Directive", "Environmental law", "Water pollution", "GE1-350", "K3581-3598", "Catchment monitoring", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.1186/s12302-025-01141-6"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Sciences%20Europe", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1186/s12302-025-01141-6", "name": "item", "description": "10.1186/s12302-025-01141-6", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1186/s12302-025-01141-6"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-06-15T00:00:00Z"}}, {"id": "10.17026/dans-z8z-5t4e", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:18:50Z", "type": "Dataset", "title": "Consumers' attitudes towards microbial applications in food production", "description": "The data was collected using an online survey as part of the research activities of the European Horizon 2020 project SIMBA (Sustainable Innovation of Microbiome Applications in the Food System). Online surveys were used to collect consumer respondent data for three food products (wheat bread, consumer potatoes and tomato sauce). These food products were selected as part of the EU Horizon 2020 SIMBA project for reflecting the diversity of food value chains in terms of organisation, technology, climatic conditions and consumption patterns across the EU. Three questionnaires corresponding to the three food products were prepared. The questionnaires consisted of four main parts: (1) socio-demographic characteristics (e.g. gender, education, income; Part One), (2) health and environmental concerns related to chemical use in farming, knowledge about microbial applications, perceived microbial health risks and attitude towards microbial applications in food production (Part Two), (3) questions for eliciting a consumer\u2019s willingness-to-pay (WTP) for a food product that had been obtained through a microbial-enhanced production system with reduced or no chemical use (Part Three), and (4) questions for eliciting a respondent\u2019s food choice motives (FCMs) using de Boer et al.\u2019s (2007) FCM questionnaire (Part Four). In addition, the questionnaire had an introduction section containing information sheet about the study and a consent form. The consent form and the information sheet for safeguarding the ethical aspects of this study (e.g. data handling, privacy and potential risks to respondents) were approved by the General Assembly of the SIMBA project as well as the Social Sciences Ethics Committee of Wageningen University prior to distributing the surveys. We collected data primarily from three countries: Germany, Italy and Netherlands.The data was collected to undertake a study to support the uptake of food products that are produced and/or processed using microbial applications. The aim of the survey was to get some insights about food choice motives of consumers, and the socio-demographic and behavioural factors influencing their food choices. The survey specifically aimed to assess the preferences and perceptions, and willingness-to-pay of consumers to wheat, potato and tomato-based food products that are produced and/or processed using microbial applications.", "keywords": ["2. Zero hunger", "13. Climate action", "Economics", "Social and Behavioural Sciences", "Business and Management", "Food economics", "12. Responsible consumption"], "contacts": [{"organization": "BM Ali", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.17026/dans-z8z-5t4e"}, {"rel": "self", "type": "application/geo+json", "title": "10.17026/dans-z8z-5t4e", "name": "item", "description": "10.17026/dans-z8z-5t4e", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.17026/dans-z8z-5t4e"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10261/179481", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:15Z", "type": "Journal Article", "created": "2018-07-19", "title": "Molecular Fingerprinting of14C Dated Soil Organic Matter Fractions from Archaeological Settings in NW Spain", "description": "Abstract<p>This paper evaluates the complexities of radiocarbon (14C) dates from soil organic matter (SOM) in archaeological scenarios. The aqueous NaOH-insoluble residual SOM from Neolithic to medieval sites in NW Spain produced consistently older calibrated14C ages than NaOH-extractable SOM. Using pyrolysis-gas chromatography-mass spectrometry (Py-GC-MS) and thermally assisted hydrolysis and methylation (THM-GC-MS), we analyzed the molecular composition of these SOM fractions, aiming to understand the differences in14C ages and to gain insight on SOM dynamics in relation to age fractionation. The molecular composition of the NaOH-extractable SOM, which accounts for roughly two-thirds of total SOM, has a larger proportion of microbial detritus than the NaOH-insoluble SOM. This might suggest that the discrepancies between the two fractions is due to microbial rejuvenation in the extractable fraction, leading to14C results that are younger than the activity that is to be dated. However, archaeological evidence presented here unambiguously shows that the14C age of the extractable SOM provides the more accurate age for the targeted activity, and that the insoluble fraction contains inherited old carbon. After statistical data evaluation using Partial Least Squares-Regression (PLS-R), it is concluded that this inherited SOM is a mixture of Black Carbon from wild and/or domestic fires and recalcitrant aliphatic SOM.</p", "keywords": ["Radiocarbon dating", "Molecular composition", "THM-GC-MS", "SOM fractions", "0601 history and archaeology", "06 humanities and the arts", "15. Life on land", "01 natural sciences", "Py-GC-MS", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10261/179481"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Radiocarbon", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10261/179481", "name": "item", "description": "10261/179481", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10261/179481"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-07-18T00:00:00Z"}}, {"id": "10.2139/ssrn.5084742", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:19:17Z", "type": "Journal Article", "created": "2025-05-25", "title": "ZnO-nanostructured electrochemical sensor for efficient detection of glyphosate in water", "description": "Glyphosate is a widely used broad-spectrum herbicide for controlling grassy weeds, despite having potential health hazards. Herein, we report on a solid-state electrochemical sensor based on ZnO nanoparticles (ZnO NPs) for on-site detection of glyphosate. Accordingly, ZnO NPs was drop-cast on the surface of a disposable screen-printed carbon electrode. Eco-friendly ZnO NPs of only 7 nm crystallite sizes were obtained by green sol-gel synthesis using lemon (Citrus limon) waste aqueous extract as the green reducing and capping/stabilizing agent and Zn nitrate precursor as evidenced by scanning electron microscopy (SEM), transmission electron microscopy (TEM), X-ray diffraction and diffuse reflectance. SEM confirmed successful electrode functionalization with the synthesized nanoparticles. Under laboratory conditions in acetate buffer (pH 5), the sensor demonstrated excellent selectivity and sensitivity, with a detection limit of 0.648 \u00b5M, a wide linear detection range (0.5 \u00b5M to 7.5 mM), and a rapid detection time of 30 min. When tested in river water, the sensor achieved a detection limit of 0.96 \u00b5M using differential pulse voltammetry. It also exceptionally tolerated interference from similar organophosphorus compounds and ions commonly found in river water. The excellent detection performance of the sensor was attributed to the strong coordination interactions between Zn atoms and phosphonate/carboxylate groups that are enhanced by a hydrogen bond at acidic pH, as determined by chemical calculations. This disposable sensor offers a cost-effective, efficient, and environmentally friendly solution for monitoring glyphosate in water systems.", "keywords": ["QD71-142", "Environmental water", "Eco-friendly ZnO nanoparticles", "Computational modeling", "Pesticides", "Eco-friendly ZnO nanoparticles;", "[SDV.MP] Life Sciences [q-bio]/Microbiology and Parasitology", "Analytical chemistry", "Sensor"]}, "links": [{"href": "https://doi.org/10.2139/ssrn.5084742"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Talanta%20Open", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2139/ssrn.5084742", "name": "item", "description": "10.2139/ssrn.5084742", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2139/ssrn.5084742"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-01T00:00:00Z"}}, {"id": "10.5061/dryad.cz8w9gj78", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:20:03Z", "type": "Dataset", "title": "Soil microbial relative resource limitation exhibited contrasting seasonal patterns along an elevational gradient in Yulong snow mountain", "description": "unspecified", "keywords": ["2. Zero hunger", "mountain ecosystems", "13. Climate action", "microbial metabolic mechanisms", "microbial relative C limitation", "microbial relative P limitation", "C use efficiency", "FOS: Earth and related environmental sciences", "15. Life on land", "elevations"], "contacts": [{"organization": "Zhang, Dandan, Wu, Baoyun, Li, Jinsheng, Cheng, Xiaoli,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.cz8w9gj78"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.cz8w9gj78", "name": "item", "description": "10.5061/dryad.cz8w9gj78", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.cz8w9gj78"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-02-02T00:00:00Z"}}, {"id": "10.5194/bg-15-1933-2018", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:20:10Z", "type": "Journal Article", "created": "2017-11-21", "title": "Straw incorporation increases crop yield and soil organic carbon sequestration but varies under different natural conditions and farming practices in China: a system analysis", "description": "<p>Abstract. Loss of soil organic carbon (SOC) from agricultural soils is a key indicator of soil degradation associated with reductions in net primary productivity in crop production systems worldwide. Simple technical and locally appropriate solutions are required for farmers to increase SOC and to improve cropland management. In the last 30 years, straw incorporation has gradually been implemented across China in the context of agricultural intensification and rural livelihood improvement. A meta-analysis of data published before the end of 2016 was undertaken to investigate the effects of straw incorporation on crop production and SOC sequestration. The results of 68 experimental studies throughout China in different edaphic, climate regions and under different farming regimes were analyzed. Compared with straw removal, straw incorporation significantly sequestered SOC (0\uffe2\uff80\uff9320\uffe2\uff80\uff89cm depth) at the rate of 0.35 (range 0.31\uffe2\uff80\uff930.40)\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921, increased crop grain yield by 13.4\uffe2\uff80\uff89% (range 9.3\uffe2\uff80\uff89%\uffe2\uff80\uff9318.4\uffe2\uff80\uff89%) and had a conversion efficiency of the applied straw-C as 16\uffe2\uff80\uff89%\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff892\uffe2\uff80\uff89% across the whole of China. The combined straw incorporation at the rate of 3\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921 with mineral fertilizer of 200\uffe2\uff80\uff93400\uffe2\uff80\uff89kg N\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921 was demonstrated to be the best combination for farmers to use with crop yield increased by 32.7\uffe2\uff80\uff89% (range 17.9\uffe2\uff80\uff89%\uffe2\uff80\uff9356.4\uffe2\uff80\uff89%) and SOC sequestrated by the rate of 0.85 (range 0.54\uffe2\uff80\uff931.15)\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921. Straw incorporation achieved higher SOC sequestration rate and crop yield increment when applied to clay soils, under high cropping intensities, and in areas like Northeast China where the soil is being degraded. SOC responses were the greatest in the initial starting phase of straw incorporation and then declined and finally were negligible after 28\uffe2\uff80\uff9362 years, however, crop yield responses were initially low and then increased reaching their highest level at 11\uffe2\uff80\uff9315 years after straw incorporation. Overall, our study confirmed that straw incorporation did create a positive feedback loop of SOC enhancement together with increased crop production, and this is of great practical significance to straw management as agricultural intensifies in China and other regions in the world with different climate conditions.                         </p>", "keywords": ["2. Zero hunger", "QE1-996.5", "info:eu-repo/classification/ddc/550", "Ecology", "Life", "QH501-531", "0401 agriculture", " forestry", " and fisheries", "Geology", "04 agricultural and veterinary sciences", "15. Life on land", "QH540-549.5"]}, "links": [{"href": "https://doi.org/10.5194/bg-15-1933-2018"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biogeosciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5194/bg-15-1933-2018", "name": "item", "description": "10.5194/bg-15-1933-2018", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5194/bg-15-1933-2018"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-11-21T00:00:00Z"}}, {"id": "10.5281/zenodo.13374006", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:20:39Z", "type": "Dataset", "title": "Microbial biomass and water-extractable carbon on Mt. Kilimanjaro", "description": "This dataset presents the value of microbial biomass carbon (MBC) and water-extractable carbon (WOC) at study plots under KiLi project.  Microbial biomass carbon (MBC) and water-extractable organic carbon (WOC) \u2013 as sensitive and important parameters for soil fertility and C turnover \u2013 are strongly affected by land-use changes all over the world. These effects are particularly distinct upon conversion of natural to agricultural ecosystems due to very fast carbon (C) and nutrient cycles and high vulnerability, especially in the tropics. The objective of this study was to use the unique advantage of Mt. Kilimanjaro \u2013 altitudinal gradient leading to different tropical ecosystems but developed all on the same soil parent material \u2013 to investigate the effects of land-use change and elevation on MBC and WOC contents during a transition phase from dry to wet season. Down to a soil depth of 50\u00a0cm, we compared MBC and WOC contents of 2 natural (Ocotea\u00a0and\u00a0Podocarpus forest), 3 seminatural (lower montane forest, grassland, savannah), 1 sustainably used (homegarden) and 2 intensively used (maize field, coffee plantation) ecosystems on an elevation gradient from 950 to 2850\u00a0m a.s.l.  The KiLi project (2010-2018) is a German Science Foundation (DFG) funded research unit (DFG research unit FOR1246) that focuses on biodiversity and ecosystem processes along altitudinal and disturbance gradients on Mt. Kilimanjaro (Tanzania, Africa), capitalizing on its world-wide unique range of climatic and vegetation zones. The research unit comprises 2 central projects and 7 subprojects from various disciplines. On a total of 60 study sites in both natural and human-disturbed ecosystems biodiversity (e.g. plants, soil arthropods, ants, bees, frogs, lizards, bats, birds), related ecosystem processes (decomposition, seed dispersal, pollination, herbivory, predation), and biogeochemical processes and properties of ecosystems (climate, soil properties and nutrient status, regulation of water and carbon fluxes, trace gas emissions, primary productivity, functional diversity) are analyzed.", "keywords": ["land-use change", "microbial carbon dynamics", "tropical ecosystem", "andosol", "elevation gradient", "water-extractable carbon"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.13374006"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.13374006", "name": "item", "description": "10.5281/zenodo.13374006", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.13374006"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-08-26T00:00:00Z"}}, {"id": "10.5281/zenodo.13952097", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:20:42Z", "type": "Dataset", "created": "2024-01-01", "title": "SERENA EJPSoil Soil erosion control in Tuscany (Italy)", "description": "Open AccessThe internal EJP SOIL project SERENA contributed to the evaluation of soil multifunctionality aiming at providing assessment tools for land planning and soil policies at different scales. By co-working with relevant stakeholders, the project provided co-developed indicators and associated cookbooks to assess and map them, to report both on soil degradation, soil-based ecosystem services and their bundles, under actual conditions and for climate and land-use changes, at the regional, national, and European scales.  One of the\u00a0objective of SERENA project was to develop methods to calculate and map soil-based ecosystem services and soil threats. The present data was prepared according to the methodology of the SERENA Soil erosion and soil erosion control cookbook.\u00a0 Soil loss was used as an indicator for soil erosion (ST). The map of soil mass not eroded was based on the RUSLE model. Soil erosion control was calculated as the difference between potential and actual soil erosion (SES, ecosystem service of soil erosion protection, i.e. soil eroded mass retained by vegetation, Mg/ha/y). For Italy, the cookbook was applied in the Tuscany region. \u00a0     To create the soil loss map we used:\u00a0       for R-factor, not freely available database of meteorological parameters spatialized at 250 m (minimum and maximum daily air temperature; cumulate daily precipitation) over Tuscany region (period 1990\u20132022, Lamma Consortium)\u00a0 and a local linear equation between R and mean annual precipitation (P);   for C -factor, Regional Land use map 1:10.000 (2018, freely available at:\u00a0https://www502.regione.toscana.it/geoscopio/usocoperturasuolo.html) and ESDAC method (https://doi.org/10.1016/j.landusepol.2015.05.021) ; \u00a0  for K-factor, sand, silt, clay, and O.C. (%) maps (built from 4.000 soil profiles, following FAO\u2019s methodology in GSP-GSOC map, Lamma Consortium), and Torri et al. (1997) function;   for LS-factor, DEM 10 m of Tuscany, (freely available at\u00a0https://www502.regione.toscana.it/geoscopio/cartoteca.html99) and Desmet & Govers (1996) SAGA tool (applied at 10 m and upscaled);   for P-factor, not freely available database 1:10.00 of terraced areas (Lamma Consortium, 2020) (for terraced areas a multiplication factor of\u00a0 0.5\u00a0 was considered, based on expert evaluation)   for P-factor, not freely available database 1:10.00 of terraced areas (Lamma Consortium, 2020) (for terraced areas a multiplication factor\u00a0of\u00a0 0.5\u00a0 was considered, based on expert evaluation)\u00a0      Maps was delivered in the GeoTIFF format in the resolution of 100m. \u00a0     Delivered data will be validated by stakeholders from Italy (scientist) in October, 2024.", "keywords": ["Italy", "Tuscany", "SERENA project", "Soil-based ecosystem service", "RUSLE", "soil erosion control", "Grant n. 862695", "EJP-Soil"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.13952097"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.13952097", "name": "item", "description": "10.5281/zenodo.13952097", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.13952097"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-10-18T00:00:00Z"}}, {"id": "10.5281/zenodo.14761001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:20:55Z", "type": "Software", "title": "PyretoClustR (executable version)", "description": "PyretoClustR (executable version)  Distilling the Pareto Optimal Front into Actionable Insights  ##Highlights:    Open-access tool to cluster and visualize complex multi-dimensional Pareto solutions  Bridging the gap between decision and objective space through intuitive visualizations  Implements k-means and k-medoids clustering without expert knowledge  Uses frequency maps to display hotspot locations for spatial optimization problems  Increasing stakeholder accessibility to Pareto solutions   Program languages: Python, RSoftware availability (source code version): https://github.com/SydneyEWhite/Pareto_ClusteringSoftware availability (executable version, with python and libraries implemented): Zenodo (10.5281/zenodo.14761001)  ## Overview    This framework performs k-means and k-medoids clustering on a set of Pareto optimal solutions derived from a multi-objective optimization algorithm.  (Optional) A correlation matrix of the input variables is returned (the goal is to help users reduce the input variable count).  Before clustering occurs, the data is cast onto principal component axes and extreme solutions are handled (if desired).  The code iterates through different possible inputs for the number of clusters, the number of principal components, and the variables that define 'extreme solutions'.  After these iterations, the best solution, as defined by silhouette score, is visualized in several ways:    Representative solutions are plotted on up to 4 dimensions  Distributions of values within the clusters are plotted in a violin plot  (optional) Maps with the frequency of a trait can be plotted, if locational data (*.shp file) is provided     ## Background: executable version  Unlike the version of PyretoClustR available on GitHub (https://github.com/SydneyEWhite/PyretoClustR), this version on Zenodo represents a standalone version of PyretoClustR not requiring a Python installation. The python_files folder contains three executables and one folder called _internal. The executables can be run by clicking on them. The _internal folder is crucial for the standalone operation of the executables and should not be modified or deleted.  ## Example Data  The data provided in the input folder (pareto_and_scen_solutions.csv and the shapefiles) are part of the BiodivERsA project TALE (\u2018Towards multifunctional agricultural landscapes in Europe\u2019). This project optimized four objectives, Agricultural gross margin (AY), Breeding habitat (BH), Low flow (LF), Nitrate load (NL) and four different land use scenarios (SQ, BAU, EXT, INT) were distinguished in the decision space.\u00a0The config.ini has been adapted to run with this dataset. To run it with your own data please alter the respective input values as outlined in config.ini.  ## Directory Structure  project_root/||\u2500\u2500 README.md||\u2500\u2500 input/|\u00a0 |\u2500\u2500 config.ini|\u00a0 |\u2500\u2500 [your_input_data].csv| \u2514\u2500\u2500 [shape_files]||\u2500\u2500 python_files/|\u00a0 |\u2500\u2500 _internal|\u00a0 |\u2500\u2500 correlation_matrix.exe|\u00a0 |\u2500\u2500 kmeans.exe| \u2514\u2500\u2500 kmedoid.exe||\u2500\u2500 r_files/| \u2514\u2500\u2500 plot_frequency_maps.R|\u2514\u2500\u2500 output/ (populated once code is run)\u00a0\u00a0 |\u2500\u2500 correlation_matrix.csv (if run)\u00a0\u00a0 |\u2500\u2500 kmeans_data_w_clusters_representativesolutions.csv (created with kmeans.exe when Extreme Solutions are not handled)\u00a0\u00a0\u00a0 |\u2500\u2500 kmeans_data_w_clusters_representativesolutions_outliers.csv (created with kmeans.exe when Extreme Solutions are handled)\u00a0\u00a0 |\u2500\u2500 kmedoid_data_w_clusters_representativesolutions.csv (created with kmedoid.exe when Extreme Solutions are not handled)\u00a0\u00a0 |\u2500\u2500 kmedoid_data_w_clusters_representativesolutions_outliers.csv (created with kmedoid.exe when Extreme Solutions are handled)\u00a0 \u2514\u2500\u2500 freq_map_cluster_X.png (if run)", "keywords": ["Multi-objective optimization", "Pareto pruning", "Land management", "Pareto optimal data", "visualization", "clustering"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.14761001"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.14761001", "name": "item", "description": "10.5281/zenodo.14761001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.14761001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-29T00:00:00Z"}}, {"id": "10.5281/zenodo.15096788", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:01Z", "type": "Dataset", "title": "HWSD2_Climate_and_Socioeconomic_agriculturalsoil_dataset_mainland_portugal", "description": "The study uses the Harmonized World Soil Database (HWSD v2.0) developed by FAO and IIASA for biophysical models and agroecological queries. This database consolidates information from various sources, including the European Soil Database, the 1:1 million soil map of China, and national soil maps from Afghanistan, Ghana, and T\u00fcrkiye. It has a spatial resolution of around 1 km and is revised in 2013 and 2023. HWSD v2.0 includes detailed information on soil mapping units, general soil unit information, and specific physical and chemical soil unit characteristics across seven depth layers.  The database fields cover a wide range of attributes, such as soil texture, bulk density, organic carbon content, pH, and cation exchange capacity. The harmonization process ensures that data from different sources is standardized and integrated, providing a consistent and reliable dataset for various applications. However, the HWSD v2.0 has some limitations, such as combining soil inventories gathered at different times, scales, and precision, which may affect its reliability for national studies. It is recommended to use national-level harmonized soil databases for more accurate results in specific regions.  For Portugal's mainland, the data presented in the HWSD v2.0 dataset is sourced from the European Soil Data Centre (ESDAC), which contains various metrics of chemical and physical soil properties. Out of the 2882 Portuguese parishes, only 22 are left out, representing 0.76% percent of the total number of parishes.  The study uses several datasets to analyze land use and occupation in Portugal. The Land Use and Occupation Map (COS2007v3.0) is a detailed thematic map of land use and occupation for mainland Portugal, developed by the Directorate-General for Territory (DGT). The data is organized hierarchically and includes 83 classes of land use and occupation. The CHELSA database, maintained by the Swiss Federal Institute for Forest, Snow, and Landscape Research (WSL), provides bioclimatic indexes for precipitation and average temperature over various temporal intervals and variables.  The National Institute of Statistics (INE) provides data on agricultural machinery distribution across different geographical locations. The dataset covers the total number of agricultural machines, as well as specific categories such as wheeled and tracked tractors, motor cultivators, power hoes, motor mowers, and combine harvesters. The dataset also examines the distribution of farms with access to irrigation based on geographical location.  The burned land data from 1975 to 2023 provides a comprehensive overview of fire occurrences and their impact over time. This data is crucial for understanding long-term patterns, assessing the effectiveness of fire prevention measures, and informing future land management and policy decisions.  Lastly, the population density dataset from the 2021 Census and the 2011 Census provides a decennial comparison of total population density across different geographical regions. These data are essential for understanding the evolution of land use and occupation in Portugal and their implications for environmental and agricultural consequences.", "keywords": ["Soil", "Total organic carbon", "Land use", "Soil use", "Atmospheric precipitation", "Soil type", "Organic carbon", "Land surface temperature"], "contacts": [{"organization": "Almeida Santos, R. G. F.", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15096788"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15096788", "name": "item", "description": "10.5281/zenodo.15096788", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15096788"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-03-27T00:00:00Z"}}, {"id": "10.5281/zenodo.15680931", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:10Z", "type": "Journal Article", "created": "2025-06-15", "title": "Investigating the extent of PFAS contamination in the Upper Danube Basin across environmental compartments", "description": "Abstract                        Background             <p>Per- and polyfluoroalkyl substances (PFAS) are emerging organic pollutants widely detected in environmental systems, posing risks to human health and the ecosystem. Despite increasing efforts to monitor PFAS in river systems, knowledge gaps remain regarding sources and emissions via different pathways. This study investigates PFAS contamination across multiple environmental compartments in the Upper Danube Basin, including surface water, groundwater, wastewater, landfill leachate, surface runoff, and atmospheric deposition. The primary objectives are to assess the extent of PFAS contamination, identify key emission sources and transport pathways, and evaluate associated risks in terms of the potential exceedance of current and proposed environmental regulatory thresholds in the European Union.</p>                                   Results             <p>The findings reveal a widespread presence of PFAS, with PFOA, PFOS and short-chain compounds being predominant. The Alz River and Gendorf chemical park emerge as hotspots with far-reaching effects downstream, contributing significantly to diffuse legacy contamination of PFOA and being a significant source of two industrial PFOA substitutes, ADONA and GenX. Wastewater treatment plants, old municipal landfills, and sites with a history of fire-fighting foam application are identified as key pathways or sources of legacy pollution, exhibiting higher concentrations compared to the other matrices. Notably, no significant removal is observed when comparing influent and effluent samples from conventional WWTPs. The study further demonstrates that groundwater is vulnerable to contamination from point sources and to infiltration from rivers, with bank filtration proving largely ineffective in preventing PFAS contamination.</p>                                   Conclusions             <p>The study underscores the necessity for source and pathway control measures to mitigate PFAS pollution, the implementation of advanced treatment technologies to safeguard drinking water and surface water quality, and targeted remediation for legacy soil and groundwater contamination. Additionally, strong use regulations should be explored to minimize ongoing emissions. The multi-compartment monitoring proves to be a crucial approach to understand the complexity of PFAS distribution at the catchment scale. Comparative analysis and risk assessment highlight challenging situations for water management, offering an indispensable basis for emission modeling as a next step for quantitative assessment of the relevance of different sources and pathways for surface water pollution.</p>", "keywords": ["Emerging contaminants", "Emerging Pollutants", "PFAS", "Source identification", "Watershed management", "Environmental sciences", "Emission", "Water Framework Directive", "Environmental law", "Water pollution", "GE1-350", "K3581-3598", "Catchment monitoring", "Environmental Monitoring"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1186/s12302-025-01141-6.pdf"}, {"href": "https://doi.org/10.5281/zenodo.15680931"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Sciences%20Europe", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15680931", "name": "item", "description": "10.5281/zenodo.15680931", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15680931"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-06-15T00:00:00Z"}}, {"id": "10.5281/zenodo.15772619", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:11Z", "type": "Dataset", "title": "Dataset to: Foundation for an Austrian NIR Soil Spectral Library for Soil Health Assessments", "description": "Dataset description  This is the corresponding dataset to the publication 'Foundation for an Austrian NIR Soil Spectral Library for Soil Health Assessments' by Fohrafellner et al. (2025). In this publication, we created the first Near-Infrared (NIR) Austrian Soil Spectral Library (ASSL, 680 \u2013 2500 nm) using 2,129 legacy samples from all environmental zones of Austria. Additionally, we utilized partial least squares regression modeling to evaluate the dataset's current effectiveness for soil health assessments. The dataset contains three tabs, 'Document meta data', 'Legend' and 'Dataset'. Tab 'Document meta data' gives information on the authors, the data collection time frame, terms of use, etc. In 'Legend', each column of the 'Dataset' is described. The 'Dataset' contains information on the legacy soil samples including:\u00a0    meta data (e.g. sample number, sampling year, zip code, environmental zone, land use),   soil properties (soil organic carbon [SOC], SOC to clay ratio, total carbon, labile carbon, CaCO3, total nitrogen, plant available phosphorus, pH measured in CaCl2 and acetate, cation exchange capacity, texture [sand, silt, clay content], and clay content measured by density in suspension), and  measured NIR soil spectra, also for the standards.   Project description  This Austrian Soil Spectral Library was built within the ProbeField project (November 2021 \u2013 January 2025), which was part of the European Joint Program for SOIL \u2018Towards climate-smart sustainable management of agricultural soils\u2019 (EJP SOIL) funded by the European Union Horizon 2020 research and innovation programme (Grant Agreement N\u00b0 862695). The project aimed to create a protocol detailing procedures and methodologies for accurately estimating fertility-related properties in agricultural soils in the field. Additionally, the potential for extending this data to two- and three-dimensional mapping using co-variates was demonstrated. ProbeField further collected field spectra that closely match laboratory spectra, enabling the prediction of soil properties using models calibrated with soil spectral libraries.  References  Fohrafellner, J., Lippl, M., Bajraktarevic, A., Baumgarten, A., Spiegel, H., K\u00f6rner, R. and Sand\u00e9n, T.: Foundation for an Austrian NIR Soil Spectral Library for Soil Health Assessments, 2025, in review.", "keywords": ["EJP SOIL", "ProbeField", "Spectroscopy", " Near-Infrared", "data"], "contacts": [{"organization": "Fohrafellner, Julia", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15772619"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15772619", "name": "item", "description": "10.5281/zenodo.15772619", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15772619"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-07T00:00:00Z"}}, {"id": "10.5281/zenodo.15781488", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:12Z", "type": "Report", "title": "Results of stakeholder surveys on preferred NSWRM implementation plans. Deliverable D5.3 of the EU Horizon 2020 project OPTAIN.", "description": "Deliverable report D5.3 of the EU Horizon 2020 Project OPTAIN (Grant agreement No. 862756)    The objective of this deliverable is to convey OPTAIN\u2019s optimisation approach, methodologies and results to stakeholders of each case study\u2019s Multi-Actor Reference Groups. More importantly, it will create a common understanding of the potential of the NSWRMs for improving water and nutrient retention in the CS, as well as of the associated trade-offs such as costs and potential reductions in crop production. Finally, this task will determine those NSWRM implementation plans preferred by individual actors using the tool, ParetoPick-R, developed in the previous task 5.3. This sets the stage for the subsequent in-depth, cross-sectoral discussion about a spatially targeted implementation of NSWRM.    Summary\u00a0  This deliverable from the EU Horizon 2020 OPTAIN project presents the results from stakeholder interviews across eleven European case studies, focusing on the identification of preferred implementation plans for Natural/Small Water Retention Measures (NSWRMs).\u00a0It builds on the modelling and multi-objective optimisation workflows employed in OPTAIN, which explored numerous options for potential measure implementation optimised for environmental and economic objectives.  Stakeholders of each case study\u2019s Multi-Actor Reference Groups (MARG) participated in structured interviews. Using the interactive ParetoPick-R app, they developed a common understanding of the potential of NSWRMs and explored trade-offs among four optimisation objectives, such as water/nutrient retention, crop production, and cost. They then selected their preferred implementation plans based on weights assigned to each objective and filter options applied to the solution space.  Key Findings:    Trade-offs & preferences: Stakeholders' preferences varied significantly across sectors and case studies. Agricultural actors typically prioritised crop production and cost-efficiency, while those in the water and nature conservation sectors leaned towards environmental benefits.  Common measures: Frequently preferred NSWRMs included soil and/or crop management measures, followed by greening measures and engineered solutions.  Feasibility issues: Technical feasibility, land ownership, and institutional hurdles (e.g., need for permits) influenced stakeholder choices.  Tool feedback: The ParetoPick-R tool was generally well-received for visualising trade-offs and supporting decision-making. However, some users found it too complex and suggested improvements in usability, guidance, and map functionality.   This deliverable D5.3 sets the foundation for the final MARG workshops in the case studies, which will seek to negotiate compromise solutions that are acceptable to all actors. The report underscores the importance of participatory modelling tools and multi-sector engagement in water and land management planning.", "keywords": ["multiobjective optimisation", "trade-offs", "NSWRM", "agricultural production", "H2020", "OPTAIN", "SWAT", "NWRM", "stakeholder", "water retention"], "contacts": [{"organization": "Strauch, Michael, Wittekind, Cordula,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15781488"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15781488", "name": "item", "description": "10.5281/zenodo.15781488", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15781488"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-01T00:00:00Z"}}, {"id": "10.5281/zenodo.15797289", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:12Z", "type": "Dataset", "title": "Database of soil characteristics under specific pesticide management", "description": "Database of soil characteristics under specific pesticide management  Contributors: Mark\u00e9ta Mayerov\u00e1 and Veronika \u0158ez\u00e1\u010dov\u00e1  Affiliation: Czech Agrifood Research Center, Drnovsk\u00e1 507/73, CZ-160 00 Prague 6, Czech Republic  Database of soil characteristics will contribute to the realization of the project\u00b4s goal to identify appropriate and inappropriate pesticides from the point of the view of their impact on the non-target organisms and soil characteristics.  Field I.  The field experiment was established in 2024 in the experimental area of the Czech Agrifood Research Center in Prague \u2013 Ruzyn\u011b (previously Crop Research Institute). The experiment took place at the site of the experiment that had been running there since 2013 and included 5 different herbicide treatments in 4 replications (Mayerov\u00e1 et al. 2018)  The new trial area was split into 20 randomised plots with 2 different herbicide treatments in 8 replications and control without herbicides in 4 replications. Herbicide treatments differed in the mode of action (Table 1)  Table 1. Summary of the herbicides and active ingredients used in the trial. Classification Group by Herbicide Resistance Action Committee (HRAC).       herbicide     dose    formulation    active ingredient    content of a.i.    HRAC group    target weeds      Agritox 50 SL    1.5 l/ha    EC    MCPA    500 g/l    O    dicot      Glean 75 PX    15 g/ha    WG    chlorsulfuron    750 g/l    B    dicot + annual grasses       \u00a0  The area of each plot was 100 m2 and the 10 by 10 m plots were separated from field boundaries and from each other by 2 m on all sides to eliminate interaction between plots. Herbicides were applied post emergency in spring (April 26, 2024) from the tillering crop stage to the beginning of stem elongation (BBCH 21\u201331) by the Agrio-Napa 12 sprayer. Winter wheat was grown in the experimental field in 2024. At the beginning of March, it was mineral fertilized with LAD (ammonium nitrate with dolomite - NH4NO3\u00a0+\u00a0CaMg (CO3)2; 27 % N) at a dose 100 kg/ha.   Mixed disturbed soil samples for microbiological and physicochemical analyses were taken from the 0-15cm upper soil layer in each replication before herbicide application (April 24, 2024), 14 days after herbicide application (May 9, 2024) and 7 weeks after herbicide application (June 14, 2024). \u00a0A total of 20 soil samples were collected at each sampling. The soil samples were subsequently dried and sieved through a 2 mm sieve, thus simultaneously homogenised. The following soil properties were determined: pH (H2O), electric conductivity, available P and K, concentration NH4 and NO3, soil organic carbon, and total organic nitrogen content. Available P and K were assessed according to the Mehlich III method (Mehlich, 1984) on an Agilant ICP-OES 5110 VDV instrument. NO3 and NH4 were determined using calcium chloride solution as extractant according to ISO 14255:1998 on automated chemistry analyser SKALAR. Soil organic carbon and soil organic matter content were determined by sulfochromic oxidation according to ISO 14235:1998.   Field II  The field experiment was established in 2024 in the experimental area of the Czech Agrifood Research Center in Prague \u2013 Ruzyn\u011b (previously Crop Research Institute). The total area of the experiment is about 11 ha including the protective area around the entire experiment. The experimental area is divided into two halves, 120m wide and 300m long.\u00a0 One half was treated on June 17, 2024, with insecticide Decis forte (active ingredient deltamethrin) at a dose 62.5ml/ha, the other half was without insecticide treatment. Both areas are further divided into other halves. One half was treated on May 15, 2024, with herbicide Agritox (active ingredient MCPA) at a dose 1.5l/ha, the other was treated with hoeing only. We thus obtained 4 strips 60m wide with following treatment combinations: (A) herbicide + insecticide; (B) hoeing + insecticide; (C) hoeing; (D) herbicide. Spring wheat was grown in the experimental field in 2024. It was fertilized with mineral nitrogen at a dose of 150 kg N/ha before sowing and with 39 kg N/ha (DAM 390 - ammonium nitrate with urea) in the tillering phenophase.  In the middle of each strip (i.e. treatment), 8 sampling sites were marked in a row, 20 m apart from each other. Mixed disturbed soil samples for microbiological and physicochemical analyses were taken from the 0-15cm upper soil layer at each sampling site 14 days after herbicide application and 14 days after insecticide application. A total of 32 soil samples were collected at each sampling. Further sample processing was the same as for Field I.  The database will be gradually supplemented in the following years.   Funding: Development for this work is funded primarily by the Technology Agency of the Czech Republic, project SS07020100: \u201cThe impact of plant protection products on non-target biodiversity: soil microorganisms, invertebrates and wild plants\u201d, and the Ministry of Agriculture of the Czech Republic, institutional support MZE-RO0425.  The database was approved on September 2, 2025, by the Ministry of Agriculture of the Czech Republic.  References:  Mayerov\u00e1 M., Mikulka J., Soukup J. (2018): Effects of selective herbicide treatment on weed community in cereal crop rotation. Plant Soil Environ., 64: 413\u2013420. https://doi.org/10.17221/289/2018-PSE  \u00a0Mehlich A. (1984): Mehlich 3 Soil Test Extractant. A Modification of the Mehlich 2 Extractant. Commun. Soil Sci. Plant Anal. 15, 1409-1416. http://dx.doi.org/10.1080/00103628409367568.", "keywords": ["field trial", " herbicides", " insecticides", " soil properties"], "contacts": [{"organization": "Mayerov\u00e1, Mark\u00e9ta, \u0158ez\u00e1\u010dov\u00e1, Veronika,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15797289"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15797289", "name": "item", "description": "10.5281/zenodo.15797289", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15797289"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-03T00:00:00Z"}}, {"id": "10.5281/zenodo.16017208", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:13Z", "type": "Dataset", "title": "Cashew orchard soil properties, Dodamarg, Northern Western Ghats, India", "description": "Soil properties of cashew orchards of the Northern Western Ghats, India  This project contains chemical properties of soil collected from cashew orchards of Dodamarg, Northern Western Ghats, for a study investigating the factors influencing the effects of forest cover, flower abundance, temperature and (potentially) soil composition on cashew pollinators.  Taxonomic Coverage:\u00a0Not applicable  Geographic Coverage: Dodamarg, Sindhudurg District, Maharashtra, India  Temporal Coverage: March 2025  \u00a0  Description of field and lab methods  Soil collection: Soil samples were collected from 30 cashew orchards, using soil core sampler. The diameter of the core sampler was measured before soil collection. All soil samples were collected from 10 cm depth after removing all the leaf litter from the ground. From each orchard, 10 soil columns were collected for analysis of chemical properties.  Chemical Properties: We estimated thirteen soil chemical properties for all soil samples collected. The following parameters were analyzed by Zuari Farmhubs Laboratory: pH, electrical conductivity (E.C.) at 25\u00b0C, organic carbon (O.C.), available phosphorus (P\u2082O\u2085), available potassium (K\u2082O), available calcium (Ca), magnesium (Mg), sulfur (S), boron (B), zinc (Zn), iron (Fe), copper (Cu), and manganese (Mn).  More details about the data can be obtained from Aditya Satish (adityasatish@ncf-india.org) and Rohit Naniwadekar (rohit@ncf-india.org) from the Nature Conservation Foundation (www.ncf-india.org).  File Descriptions:  Data file: Dodamarg_2025_Cashew_Soil_Properties.csv  We have also included a ReadMe.txt file that explains the data file, akin to the description in the metadata.  Description of the columns of the data file:    Sl no: Serial number  Site: Site ID  Code: Site code (General location)  Latitude: latitude co-ordinate of the plot (in decimal degrees, \u00b0N)  Longitude: longitude co-ordinate of the plot (in decimal degrees, \u00b0E)  pH: pH of the soil  E.C.: Electrical Conductivity at 25\u00b0C (in dS/m)  O.C.: Organic Carbon (in %)  P\u2082O\u2085: Available P\u2082O\u2085 (in Kg /acre)  K\u2082O: Available Potassium (in Kg /acre)  Ca: Available Calcium (in mg/Kg)  Mg: Available Magnesium (in mg/Kg)  S: Available Sulphur (in mg/Kg)  B: Available Boron (in mg/Kg)  Zn: Available Zinc (in mg/Kg)  Fe: Available Iron (in mg/Kg)  Cu: Available Copper (in mg/Kg)  Mn: Available Manganese (in mg/Kg)   Funding:\u00a0  Godrej Consumer Products Limited  Arvind Datar  Rohini Nilekani Philanthropies", "keywords": ["Soil chemical properties", "Cashew orchards", "Ecology", "FOS: Biological sciences", "Northern Western Ghats"], "contacts": [{"organization": "Sadekar, Vishal, Satish, Aditya, Naniwadekar, Rohit,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.16017208"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.16017208", "name": "item", "description": "10.5281/zenodo.16017208", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.16017208"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-17T00:00:00Z"}}, {"id": "10.5281/zenodo.16261617", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:13Z", "type": "Dataset", "title": "Dataset to: Austrian NIR Soil Spectral Library for Soil Health Assessments", "description": "Dataset description  This is the corresponding dataset to the publication 'Austrian NIR Soil Spectral Library for Soil Health Assessments' by Fohrafellner et al. (2025). In this publication, we created the first Austrian Near-Infrared (NIR) Soil Spectral Library (680 \u2013 2500 nm) using 2,129 legacy samples from all environmental zones of Austria. Additionally, we utilized partial least squares regression modeling to evaluate the dataset's current effectiveness for soil health assessments. The dataset contains three tabs, 'Document meta data', 'Legend' and 'Dataset'. Tab 'Document meta data' gives information on the authors, the data collection time frame, terms of use, etc. In 'Legend', each column of the 'Dataset' is described. The 'Dataset' contains information on the legacy soil samples including:\u00a0    meta data (e.g. sample number, sampling year, zip code, environmental zone, land use),   soil properties (soil organic carbon [SOC], SOC to clay ratio, total carbon, labile carbon, CaCO3, total nitrogen, plant available phosphorus, pH measured in CaCl2 and acetate, cation exchange capacity, texture [sand, silt, clay content], and clay content measured by density in suspension), and  measured NIR soil spectra, also for the standards.   Project description  This Austrian NIR Soil Spectral Library was built within the ProbeField project (November 2021 \u2013 January 2025), which was part of the European Joint Program for SOIL 'Towards climate-smart sustainable management of agricultural soils' (EJP SOIL) funded by the European Union Horizon 2020 research and innovation programme (Grant Agreement N\u00b0 862695). The project aimed to create a protocol detailing procedures and methodologies for accurately estimating fertility-related properties in agricultural soils in the field. Additionally, the potential for extending this data to two- and three-dimensional mapping using co-variates was demonstrated. ProbeField further collected field spectra that closely match laboratory spectra, enabling the prediction of soil properties using models calibrated with soil spectral libraries.  References  Fohrafellner, J., Lippl, M., Bajraktarevic, A., Baumgarten, A., Spiegel, H., K\u00f6rner, R. and Sand\u00e9n, T.: Austrian NIR Soil Spectral Library for Soil Health Assessments, 2025, in review.", "keywords": ["EJP SOIL", "ProbeField", "spectroscopy", "data", "near-infrared"], "contacts": [{"organization": "Fohrafellner, Julia, Lippl, Maximilian, Bajraktarevic, Armin, Baumgarten, Andreas, Spiegel, Heide, K\u00f6rner, Robert, Sand\u00e9n, Taru,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.16261617"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.16261617", "name": "item", "description": "10.5281/zenodo.16261617", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.16261617"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-21T00:00:00Z"}}, {"id": "10.5281/zenodo.17475742", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:16Z", "type": "Dataset", "title": "In-situ and UAV dataset with crop and soil parameters obtained from winter wheat fields", "description": "unspecifiedThe study area was located in the Danubian Plain, Bulgaria, near the town of Knezha (43.495\u00b0N, 24.081\u00b0E). Five field campaigns (November, March, April, May, and June) were conducted during the 2016-2017 agricultural season and two (November and April) during the 2017-2018 agricultural season. Each campaign took four-five days to complete. A hierarchical sampling strategy, consisting of three levels, was adopted: Unit (a single commercial agricultural field), Elementary Sampling Unit (ESU; a 20 \u00d7 20 m plot), and Elementary Sub-Sampling Unit (ESSU; a particular location in the ESU where measurement is taken). Six Units were selected for sampling during each agricultural season. Different number of ESUs were sampled in each Unit depending of its size and diversity of soils. The location of the ESUs was kept unchanged during the season except in case relocation was needed due to waterlogging. The geographic coordinates were measured each time an ESU was visited, irrespective of whether it was relocated or not and a unique ID assigned to the ESU. Thus, data from each visit are presented as a separate independent record (row) in the dataset. In each ESU there were 3 ESSUs, one at the center and two at opposite corners of the ESU. The biological yield was measured only in the central ESSU. The dataset contains only data averaged at ESU level. Two unique identifiers, Unit_ID and ESU_ID, were used across the dataset's tables, helping identify data records and connect tables. The Unit_ID consists of the season and the Unit number, for instance \u201cS16-17_U1\u201d, where \u201cS16-17\u201d is the agricultural season 2016-2017, and \u201cU1\u201d is Unit 1. The ESU_ID consists of the month and year of the field campaign, the Unit number, and the ESU number, for instance \u201capr2017_1_2\u201d, where \u201capr2017\u201d is the April 2017 field campaign, \u201c1\u201d is the Unit number, and \u201c2\u201d is the ESU number.   The LAI, fIPAR, FAPAR, and fCover were measured using AccuPAR LP-80 ceptometer. The CC was measured using CCM-300. The AGB and plant nitrogen samples were collected from a 1 m x 1 m plot at the central ESSU and 50 cm x 50 cm plots in the other two ESSUs. The nitrogen (N) content of the above-ground organs was determined by the Kjeldahl method and expressed as per-cent of the dry weight. N uptake (g m-2) was determined as the product of N content and the dry AGB. Soil moisture content (W) was measured gravimetrically at the surface (0-5 cm) and, in some ESUs, at three additional depths (0-30 cm, 30-60 cm, and 60-100 cm) in 10 cm increments. The data were expressed in percent by mass. Reflectance data was collected using ASD FieldSpec 4 HiRes Field Spectrometer (ASD HH FS4 HiRes). Crop phenology was reported after Zadoks et al. (1974). The damages and weeds status were assessed using five-point rating scales.   The data from the four soil profiles included morphological description of soil horizons, texture (the particle-size distribution was determined by sieving and the pipette method in accordance with ISO 11277-2020), concentration of organic carbon, pH, bulk density, water retention at suctions from 0.25 kPa (pF 0.4) to 33 kPa (pF 2.7), total porosity. Soil water retention curves (pF curves) were obtained during the drainage of the samples by using the suction plate method, pressure membrane apparatus, and desiccators methods, as described in (Rousseva et al., 2017). The field capacity (FC) was estimated by the water content retained at a suction of 10 kPa (pF = 2.0). The wilting point was estimated at a suction 1500 kPa (pF = 4.2). The water retention experimental data at different suctions were approximated with the van Genuchten equation (Van Genuchten, 1980).  The crop calendar and management data included information for the studied winter wheat fields, including soil type, predecessor, pre-sowing preparation, variety, sowing date and norm, dates and type of fertilization, plant protection measures, dates of the main development stages of winter wheat, harvesting date and yield. \u00a0\u00a0  Multispectral image mosaics of the studied fields were generated using the fixed-wing drone eBee Ag furnished with Sequoia camera. The camera has Multi-channel sensor with green (550 nm), red (660 nm), red edge (735 nm), and NIR (790 nm) bands.  Meteorological data were collected by an automatic telemetric agro-meteorological station ADCON addVantage Pro6.5 installed in the vicinity of the town of Knezha. The station operated between 30.11.2016 and 22.03.2017 on its initial location (Location 1: 43.521917\u00b0N, 24.098848\u00b0E) and was later moved to another location, 1.3 km southwards (Location 2: 43.511391\u00b0N, 24.092252\u00b0E), where it collected data between 26.04.2017 and 3.12.2018. The station was equipped with sensors for air temperature, relative humidity, solar radiation, wind speed, wind direction, rain, PAR, soil moisture and temperature (12 depths between 5 cm and 115 cm at 10 cm intervals). Data from all sensors were recorded at 30 min intervals.  References:  Zadoks, J.C., T.T. Chang, C.F. Konzak. 1974. A decimal code of the growth stages of cereals. Weed Research, 14, 415-421.  Rousseva, S., Kercheva, M., Shishkov, T., Lair, G.J., Nikolaidis, N.P., Moraetis, D., Kr\u00e1m, P., Bernasconi, S.M., Blum, W.E.H., Menon, M., et al. 2017. Soil Water Characteristics of European SoilTrEC Critical Zone Observatories. In Advances in Agronomy; Academic Press: Cambridge, MA, USA, Volume 142, pp. 29\u201372.  van Genuchten, M. T., 1980. A closed-form equation for predicting the hydraulic conductivity of unsaturated soils. Soil Sci. Soc. Am. J. 44, 892\u2013898.", "keywords": ["Winter wheat", "Chlorophyll", "Phenology", "UAV", "Yield (agricultural)", "Soil profile", "Biomass", "Remote sensing", "Spectroscopy", "LAI"], "contacts": [{"organization": "Dimitrov, Petar, Roumenina, Eugenia, Jelev, Georgi, Filchev, Lachezar, Gikov, Alexander, Kamenova, Ilina, Ilieva, Iliana, Ganeva, Dessislava, Kercheva, Milena, Banov, Martin, Krasteva, Veneta, Kolchakov, Viktor, Dimitrov, Emil, Miteva, Nevena,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.17475742"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.17475742", "name": "item", "description": "10.5281/zenodo.17475742", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.17475742"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-10-31T00:00:00Z"}}, {"id": "10.5281/zenodo.17941270", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:18Z", "type": "Dataset", "title": "Dataset to: Austrian NIR Soil Spectral Library for Soil Health Assessments", "description": "Dataset description  This is the corresponding dataset to the publication 'Austrian NIR Soil Spectral Library for Soil Health Assessments' by Fohrafellner et al. (2025). In this publication, we created the first Austrian Near-Infrared (NIR) Soil Spectral Library (680 \u2013 2500 nm) using 2,129 legacy samples from all environmental zones of Austria. Additionally, we utilized partial least squares regression modeling to evaluate the dataset's current effectiveness for soil health assessments. The dataset contains three tabs, 'Document meta data', 'Legend' and 'Dataset'. Tab 'Document meta data' gives information on the authors, the data collection time frame, terms of use, etc. In 'Legend', each column of the 'Dataset' is described. The 'Dataset' contains information on the legacy soil samples including:\u00a0    meta data (e.g. sample number, sampling year, zip code, environmental zone, land use),   soil properties (soil organic carbon [SOC], SOC to clay ratio, total carbon, labile carbon, CaCO3, total nitrogen, plant available phosphorus, pH measured in CaCl2 and acetate, cation exchange capacity, texture [sand, silt, clay content], and clay content measured by density in suspension), and  measured NIR soil spectra, also for the standards.   Project description  This Austrian NIR Soil Spectral Library was built within the ProbeField project (November 2021 \u2013 January 2025), which was part of the European Joint Program for SOIL 'Towards climate-smart sustainable management of agricultural soils' (EJP SOIL) funded by the European Union Horizon 2020 research and innovation programme (Grant Agreement N\u00b0 862695). The project aimed to create a protocol detailing procedures and methodologies for accurately estimating fertility-related properties in agricultural soils in the field. Additionally, the potential for extending this data to two- and three-dimensional mapping using co-variates was demonstrated. ProbeField further collected field spectra that closely match laboratory spectra, enabling the prediction of soil properties using models calibrated with soil spectral libraries.  References  Fohrafellner, J., Lippl, M., Bajraktarevic, A., Baumgarten, A., Spiegel, H., K\u00f6rner, R. and Sand\u00e9n, T.: Austrian NIR Soil Spectral Library for Soil Health Assessments, 2025, in review.", "keywords": ["EJP SOIL", "ProbeField", "spectroscopy", "data", "near-infrared"], "contacts": [{"organization": "Fohrafellner, Julia, Lippl, Maximilian, Bajraktarevic, Armin, Baumgarten, Andreas, Spiegel, Heide, K\u00f6rner, Robert, Sand\u00e9n, Taru,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.17941270"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.17941270", "name": "item", "description": "10.5281/zenodo.17941270", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.17941270"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-21T00:00:00Z"}}, {"id": "10.5281/zenodo.5574882", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:25Z", "type": "Report", "created": "2020-03-09", "title": "Hyperspectral imaging for high resolution mapping of soil profile organic carbon distribution in an Austrian Alpine landscape", "description": "<p>         &amp;lt;p&amp;gt;Studies on soil organic carbon (SOC) stocks mostly focus on topsoils (&amp;lt; 30 cm). However, 30 to 63% of the SOC are stored in the subsoils (30 to 100 cm), and the factors controlling SOC storage in subsoils may be substantially different than in topsoils. The low mean SOC content in subsoils makes its quantification and characterization challenging. Thus, new approaches are required to depict the SOC stocks distribution in full soil profile. Hyperspectral imaging of soil core samples can provide high spatial resolution of the vertical distribution of SOC in a soil profile. The main objective of the ongoing study, within the Horizon 2020 European Project Circular Agronomics, is to apply laboratory hyperspectral imaging with a variety of machine learning approaches for the mapping of OC distribution in undisturbed soil cores. Soil cores were collected down to a depth of one meter in grasslands of 15 organic farms located in the Lungau Valley, in Austria. Some samples were divided into five depths in the field for classical bulk soil measurements (total carbon and nitrogen, texture, pH, EC and bulk density) on disturbed samples. Undisturbed soil cores were sliced vertically for laboratory hyperspectral imaging in the range of Vis-NIR (400-1000 nm). We were able to reveal the hotspots of OC and map the OC distribution in soil profile by applying a variety of machine learning approaches (i.e. partial least square and random forest regression) as a function of spectral responses. A digital elevation model was further exploited to investigate the effects of topographical factors such as elevation, aspect and slope on SOC profile distribution. Landsat 8 data were also used to depict the spatial variability of land insensitive cover/vegetation in study area.&amp;lt;/p&amp;gt;         </p>", "keywords": ["2. Zero hunger", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Vis-NIR imaging spectroscopy", " Alpine grassland", " Digital elevation model", " Subsoils"], "contacts": [{"organization": "YASER OSTOVARI, K\u00f6ppend\u00f6rfer, Baptist, Guigue, Julien, Van Groenigen, Jan Willem, Creamer, Rachel, Guggenberger, Thomas, Grassauer, Florian, Hobley, Eleanor, Ferron, Laura, Martens, Henk, K\u00f6gel-Knabner, Ingrid, Vidal, Alix,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.5574882"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.5574882", "name": "item", "description": "10.5281/zenodo.5574882", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.5574882"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-23T00:00:00Z"}}, {"id": "10.5281/zenodo.6202061", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:26Z", "type": "Dataset", "title": "Bias-corrected EURO-CORDEX RCM simulations for the OPTAIN case studies", "description": "Open AccessBias-corrected EURO-CORDEX RCM simulations are available on a daily timescale for: -period 1981-2099/2100, -6 RCM, -3 scenarios (RCPs 2.6, 4.5 and 8.5), -7 variables (mean, minimum and maximum temperature, precipitation, solar radiation, wind speed at 2 m and relative humidity) and -18 domains and 23 locations within these domains. Bias correction and further downscaling to 0.1\ufffd\ufffd was done using ERA5-Land reanalysis data with non-parametric empirical quantile mapping. Moreover, the interpolation of gridded bias-corrected climate model simulations to the locations was made using universal kriging. <strong>Organization of the data</strong> The name of the files are <em>domain</em>-<em>type</em>.zip, where <em>type</em> is gridded (NetCDF) or point (csv). Each zip file contains multiple files, organized in subfolders: <em>experiment</em>/<em>modelNumber</em>/<em>variable</em>.nc for gridded and <em>experiment</em>/<em>modelNumber</em>/<em>variable-pilotFieldNumber</em>.txt for point data, where <em>experiment </em>is rcp26, rcp45 or rcp85. <em>domain and pilotFieldNumber</em> <strong>domain</strong> <strong>domain </strong><strong>location (min and max. Longitude, min and max latitude</strong><strong>)</strong> <strong>pilotFieldNumber</strong> <strong>pilot field </strong><strong>location (longitude, latitude)</strong> <strong>case study</strong><strong> number</strong> <strong>country</strong> <strong>Name (OPTAIN case study)</strong> 01 50.95 51.45 14.55 15.05 1 DEU Schoeps 02 46.35 47.05 6.55 7.15 2 46.816667 6.95 2 CHE Petite Glane 02_1 46.75 47.25 7.25 7.75 1 46.983333 7.466667 02_34 47.35 47.85 8.35 3 4 47.433333 8.516667 47.683333 8.616667 02_5 46.15 46.65 5.95 6.45 5 46.4 6.233333 03a 46.65 47.15 17.45 17.95 1 2 3 4 46.92649 17.68246 46.9166 17.68976 46.91283 17.69754 46.91283 17.69723 3a HUN Csorsza 03b 46.45 46.95 16.65 17.15 3b HUN Felso Valicka 04 52.35 52.85 18.45 18.95 1 52.597469 18.728617 4 POL Upper Zglowiaczka 05 46.35 46.85 15.35 15.85 5 SVN Pesnica 06 46.45 46.95 16.15 16.65 6 HUN/SVN Kebele/Kobiljski 07 49.85 50.35 4.75 5.25 7 BEL La Wimbe 08 55.15 55.75 23.55 24.05 1 2 55.522057 23.799235 55.42233194 23.82580339 8 LTU Dotnuvele 09 45.45 45.95 9.65 10.15 9 ITA Cherio 10 59.45 59.95 10.75 11.25 1 2 3 4 5 6 7 8 59.71949 10.83576 59.6833306 10.8833298 59.6833306 10.8833298 59.665 10.9475 59.665 10.9475 59.841012 10.903597 59.757631 11.072031 59.539623 10.856447 10 NOR Krogstad 11 46.45 46.95 17.55 18.05 1 2 46.658333 17.75583 46.656944 17.75833 11 HUN Tetves 12 49.35 49.85 14.75 15.25 1 49.616837 15.078266 12 CZE Cechticky 13 55.85 56.35 25.85 26.45 13 LVA Dviete 14 59.75 60.25 17.55 18.05 14 SWE Ingvastaan Lehstaan <em>modelNumber</em> <strong>modelNumber</strong> <strong>Driving Model (GCM)</strong> <strong>Ensemble</strong> <strong>RCM </strong> <strong>End date</strong> 1 EC-EARTH r12i1p1 CCLM4-8-17 31.12.2100 2 EC-EARTH r3i1p1 HIRHAM5 31.12.2100 3 HadGEM2-ES r1i1p1 HIRHAM5 30.12.2099 4 HadGEM2-ES r1i1p1 RACMO22E 30.12.2099 5 HadGEM2-ES r1i1p1 RCA4 30.12.2099 6 MPI-ESM-LR r2i1p1 REMO2009 31.12.2100 <em>variable</em> <strong>variable</strong> <strong>description</strong> <strong>Unit</strong> Tmean Mean temperature \ufffd\ufffdC Tmin Min temperature \ufffd\ufffdC Tmax Max temperature \ufffd\ufffdC prec Precipitation mm solarRad Solar radiation MJ/m2 windSpeed Wind speed at 2m m/s relHum Relative humidity % <strong>Methodolody</strong> Bias correction was done using non-parametric empirical quantile mapping with modified method from R package qmap. Parameters selected were: corrections for each day of the year using a moving windows for a 31 days; 100 quantiles; wet days corrections for precipitation. The reference period is 1981-2010. The interpolation of gridded bias-corrected climate model simulations to the location was made using universal kriging with R packages automap and gstat with (external) variables x, y, x2, y2, x*y, z, where x is latitude, y is longitude, and z is elevation. For Digital Elevation Model Shuttle Radar Topography Mission was used. If there was an error using above mentioned variables, the number of variables was reduced to x, y, x*y, z and if there was still an error to x, y, z. <strong>Funding</strong> This project has received funding from the European Union\ufffd\ufffd\ufffds Horizon 2020 research and innovation programme under grant agreement No 862756.", "keywords": ["CORDEX", "13. Climate action", "RCM", "ERA5-Land", "OPTAIN", "EURO-CORDEX", "bias correction"], "contacts": [{"organization": "Honzak, Luka", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6202061"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6202061", "name": "item", "description": "10.5281/zenodo.6202061", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6202061"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-21T00:00:00Z"}}, {"id": "10.5281/zenodo.6380873", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:26Z", "type": "Journal Article", "title": "Optimization of a hemolymph protein extraction method from native polyacrylamide gel", "description": "<strong>INTRODUCTION:</strong> Although there are indications that insect-based proteins may have potential biomedical applications (anticancer and antimicrobial), as well as in cellular agriculture (food and feed), they have not been sufficiently investigated. The hemolymph of insect larvae is protein-rich, particularly in storage proteins that are involved in amino acid metabolism and protein synthesis. In order to characterize these proteins, the first step is their successful isolation. Using diapausing 5th instar larvae of the economically important European corn borer moth (ECB) <em>Ostrinia nubilalis </em>(Hbn.) as a model system, in this study we optimized a method for isolating individual native hemolymph proteins from polyacrylamide gels and we performed initial tests of isolated proteins bioactivity. <strong>OBJECTIVES:</strong> The main objective in this study was to optimize an easy and affordable method for isolation of individual hemolymph proteins in the native state, without the use of chemicals that would affect their structure and function (e.g. sodium dodecyl sulfate, SDS). This allows further testing of these proteins for biomedical and application in cellular agriculture, and further work with isolated proteins in downstream in vitro proteome research, which will bring new knowledge and directions for different in silico proteome research. <strong>METHOD / DESIGN: </strong>Hemolymph was collected from diapausing 5th instar ECB larvae, after which hemocytes were removed from the hemolymph by centrifuging the samples for 30 min. at 16 000 g. Hemolymph proteins were separated by native polyacrylamide gel electrophoresis (PAGE) on a customized discontinuous gel without a well comb, using the BIO-RAD Mini-PROTEAN\ufffd\ufffd Tetra cell. <br> In order to determine the position of protein fractions of interest on the gel after electrophoresis, thin vertical strips were cut from the sides of the polyacrylamide gel and stained with Coomassie Brilliant Blue, after which the same gel strips were destained. The strips were placed next to the original gels and 5 protein fractions were cut from the unstained part of the polyacrylamide gel, chopped and transferred to microtubes. Ultrapure water was added to the tubes and they were placed on the Biometra TSC ThermoShaker overnight at 30\ufffd\ufffdC to elute the proteins from the gels. After elution, the protein samples were centrifuged for 15 min. at 10 000 g. The concentration of isolated proteins was determined by measuring the absorbance at 230 nm using the Shimadzu BioSpec-nano, with a serial dilution of bovine \ufffd\ufffd-globulin used as the protein standard. To confirm that the proteins were well isolated, the individual fractions were run in duplicate wells on discontinuous native PAGE using the BIO-RAD Mini-PROTEAN\ufffd\ufffd 3 Cell, after which the gels were stained, destained and imaged. Finally, the effect of successfully isolated proteins on MRC-5 cell viability was examined using an MTT assay. <strong>RESULTS: </strong>Five distinct protein fractions were detected after the first native PAGE (P1-P5). After elution from the gel, these fractions and the method for their isolation were validated with a second native PAGE. Regarding the testing of isolated protein bioactivity, the results of the MTT assay indicate an antiproliferative effect of all 5 protein fractions, especially in the P4 fraction. <strong>CONCLUSIONS: </strong>The insect hemolymph protein extraction method optimized in this study proved to be simple and successful and could potentially be applied to other insect species as well. Also, the structure and function of the proteins remained intact during the isolation process, which allows further use of the isolated proteins in downstream in vitro proteome research, the results of which will contribute to protein identification and in silico proteome research based on different bioinformatics tools (e.g. protein-protein interaction analysis, in silico bioactivity analyses, etc.). Finally, since the isolated proteins showed antiproliferative effects on the selected cell line, their anticancer and antimicrobial activity will be further tested.", "keywords": ["insects; hemolymph proteins; native PAGE; protein isolation; proteomics"], "contacts": [{"organization": "Teodora, Kne\u017ei\u0107, Milo\u0161, Avramov, \u017deljko, Popovi\u0107 D., Ljiljana, Janju\u0161evi\u0107, Mila, Djisalov, Ivana, Gadjanski,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6380873"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Book%20of%20Abstracts%20-%20Bioscience%20Conference%20and%20the%208th%20International%20PSU%20%E2%80%93%20UNS%20Bioscience%20Conference%20%28IBSC2021%29", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6380873", "name": "item", "description": "10.5281/zenodo.6380873", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6380873"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.5281/zenodo.8407642", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:41Z", "type": "Report", "title": "Shedding light on the genetic diversity and evolutionary dynamics of geographic populations of Wisteria vein mosaic virus: a case study for the spread of emerging potyviruses in Europe?", "description": "Wisteria vein mosaic virus (WVMV) is a member of the genus Potyvirus associated with Wisteria mosaic disease (WMD), the most serious disease affecting Wisteria spp. In 2022, severe symptoms of WMD were observed on the leaves of a Chinese wisteria (W. sinensis) tree growing in an urban area in Apulia (Italy). The presence of WVMV was ascertained by RT-PCR analysis. Although the occurrence of WVMV in Italy had been posited in the late 1960s, no molecular information had been reported for any Italian isolate prior to this study. Subsequent phylogenetic analyses based on NIb and CP genes placed the WVMV Italian isolate within a large clade identified in the genus Potyvirus as the BCMV supergroup. Based on the increasing number of reports of the virus worldwide, we attempted an exploratory analysis of its genetic diversity and possible mechanisms that may have shaped its geographic population structure. Relying on the N-terminus of the CP, available for twenty WVMV isolates from Europe, Asia, and Oceania, sixteen different haplotypes were identified. A high haplotype diversity was found, particularly relevant in the European population. The measured dN/dS ratio led to the assumption that the target region is under purifying selection. Tests evaluating the neutrality of nucleotide variability showed different results for the European and Asian groups. The estimation of inter-population genetic differentiation showed a high level of gene flow between the two populations. Overall, our results provide a possible approach to understanding the mechanisms of WVMV emergence in Europe and draw attention to its further spread and the increasing threat of this and other neglected potyvirus species to the ornamental nursery sector.", "keywords": ["WVMV; selection pressure; population genetics; genetic diversity; gene flow; haplotype diversity; neutrality tests; FastME phylogeny", "3. Good health"], "contacts": [{"organization": "G. D'Attoma, A. Minafra", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.8407642"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.8407642", "name": "item", "description": "10.5281/zenodo.8407642", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.8407642"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-09-18T00:00:00Z"}}, {"id": "10773/25427", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:26Z", "type": "Journal Article", "created": "2018-01-07", "title": "Toxicokinetics of Zn and Cd in the earthworm Eisenia andrei exposed to metal-contaminated soils under different combinations of air temperature and soil moisture content", "description": "This study evaluated how different combinations of air temperature (20\u202f\u00b0C and 25\u202f\u00b0C) and soil moisture content (50% and 30% of the soil water holding capacity, WHC), reflecting realistic climate change scenarios, affect the bioaccumulation kinetics of Zn and Cd in the earthworm Eisenia andrei. Earthworms were exposed for 21\u202fd to two metal-contaminated soils (uptake phase), followed by 21\u202fd incubation in non-contaminated soil (elimination phase). Body Zn and Cd concentrations were checked in time and metal uptake (k1) and elimination (k2) rate constants determined; metal bioaccumulation factor (BAF) was calculated as k1/k2. Earthworms showed extremely fast uptake and elimination of Zn, regardless of the exposure level. Climate conditions had no major impacts on the bioaccumulation kinetics of Zn, although a tendency towards lower k1 and k2 values was observed at 25\u00a0\u00b0C\u00a0+\u00a030% WHC. Earthworm Cd concentrations gradually increased with time upon exposure to metal-contaminated soils, especially at 50% WHC, and remained constant or slowly decreased following transfer to non-contaminated soil. Different combinations of air temperature and soil moisture content changed the bioaccumulation kinetics of Cd, leading to higher k1 and k2 values for earthworms incubated at 25\u00a0\u00b0C\u00a0+\u00a050% WHC and slower Cd kinetics at 25\u00a0\u00b0C\u00a0+\u00a030% WHC. This resulted in greater BAFs for Cd at warmer and drier environments which could imply higher toxicity risks but also of transfer of Cd within the food chain under the current global warming perspective.", "keywords": ["Soil invertebrates", "Bioavailability", "Climate Change", "0211 other engineering and technologies", "02 engineering and technology", "Global Warming", "01 natural sciences", "Soil", "Metals", " Heavy", "SDG 13 - Climate Action", "Climate change", "Animals", "Soil Pollutants", "Oligochaeta", "0105 earth and related environmental sciences", "2. Zero hunger", "Triazines", "Temperature", "Water", "Bioaccumulation", "Mining wastes", "Toxicokinetics", "Zinc", "Heavy metals", "Metals", "13. Climate action", "Environmental Pollution", "Cadmium"]}, "links": [{"href": "https://doi.org/10773/25427"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Chemosphere", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10773/25427", "name": "item", "description": "10773/25427", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10773/25427"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-04-01T00:00:00Z"}}, {"id": "10.7910/DVN/HXAH87", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:10Z", "type": "Dataset", "title": "Arbuscular and ectomycorrhizal fungi diversity in the Indian subcontinent", "description": "Mycorrhizal fungi (MF) are below-ground organisms playing a key role in terrestrial ecosystems as they regulate nutrient and carbon cycles, and influence soil structure and ecosystem multifunctionality. Arbuscular and ectomycorrhizal fungi are the two mycorrhizal types most relevant to worldwide ecosystems, but areas like the Indian sub-continent remain under-represented in global maps. The dataset presented here reports the available information regarding arbuscular and ectomycorrhizal fungi diversity in cultivated and natural ecosystems of the Indian subcontinent. We have selected studies published in English in ISI Web of Science during the years 2005 - 2020 that provided a taxonomic classification of MF and their associated abundance in terms of percentage of root colonization or number of spores per quantity of soil. From the screening of 74 studies, we have recorded: i. the scientific or common name of the plant or the generic habitat sampled for MF identification; ii the MF genus and species; iii. the location of the study with associated altitude and geographic coordinates; iv. main soil physico-chemical properties (soil pH, texture, organic Carbon, Total Nitrogen, available Phosphorus); climatic variables such as mean annual precipitation and temperature.&lt;br&gt;&lt;br&gt;", "keywords": ["ecosystem management", "Asia", "Agricultural Sciences", "CGIAR Research Program on Water", " Land and Ecosystems", "Multifunctional Landscapes", "gesti\u00f3n de ecosistemas", "soil biology", "MYCORRHIZAE", "CGIAR Research Program", "Earth and Environmental Sciences", "SOIL BIOLOGY", "BIODIVERSITY", "mycorrhizae", "biolog\u00eda del suelo"], "contacts": [{"organization": "Beggi, Francesca, Dasgupta, Debarshi,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.7910/DVN/HXAH87"}, {"rel": "self", "type": "application/geo+json", "title": "10.7910/DVN/HXAH87", "name": "item", "description": "10.7910/DVN/HXAH87", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.7910/DVN/HXAH87"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.7910/DVN/ZTMDUR", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:11Z", "type": "Dataset", "created": "2005-01-01", "title": "Pilot Analysis of Global Ecosystems (PAGE), Agroecosystems dataset", "description": "&lt;br&gt;The Pilot Analysis of Global Ecosystems (PAGE): Agroecosystems was one of four pilot studies undertaken as precursors to the Millennium Ecosystem Assessment. The study identifies linkages between crop production systems and environmental services such as food, soil resources, water, biodiversity, and carbon cycling, in the hopes that a better understanding of these linkages might lead to policies that can contribute both to improved food output and to improved ecosystem service provision. Th e PAGE Agroecosystems report includes a series of 24 maps that provide a detailed spatial perspective on agroecosystems a nd agroecosystem services. Pilot Analysis of Global Ecosystems (PAGE): Agroecosystems Dataset offers the 9 geospatial datasets used to build these maps. &lt;/br&gt;  &lt;br&gt;The datasets are:&lt;/br&gt;  &lt;br&gt;PAGE Global Agricultural Extent. The data describe the location and extent of global agriculture and are derived from GLLCCD 1998; USGS EDC1999a.&lt;/br&gt;  &lt;br&gt;PAGE Global Agricultural Extent version 2. The data are an update of the original PAGE Global Agricultural Extent, based on version 2 of the Global Land Cover Characteristics Dataset (GLCCD v2.0, USGS/EDC 2000). The methods used to create this dataset were the same as those employed to create the origina l PAGE Global Agricultural Extent.&lt;/br&gt;  &lt;br&gt;Mask of the Global Extent of Agriculture. This dataset displays the global extent of agricultural areas as defined by the PAGE study. The other datasets made available on this site (eg. tree cover, soil carbon, area free of soil constraints) only show values for areas within this agricultural extent.&lt;/br&gt;  &lt;br&gt;PAGE Global Agroecosystems. These data characterize agroecosystems, defined as 'a biological and natural resource system managed by humans for the primary purpose of producing food as well as other socially valuable nonfood products and environmental services.' &lt;/br&gt;  &lt;br&gt;Percentage Tree Cover within the Extent of Agriculture. This is a raster dataset that shows the proportion of land area within the PAGE agricultural extent that is occupied by 'woody vegetation' (mature vegetation whose approximate height is greater than 5 meters).&lt;/br&gt;  &lt;br&gt;Carbon Storage in Soils within the PAGE Agricultural Extent. The data give a global estimate of soil organic carbon storage in agricultural lands, calculated by applying Batjes' (1996 and 2000) soil organic carbon content values by soil type area share of each 5 x 5 minute of the Digital Soil Map of the World (FAO 1995). &lt;/br&gt;  &lt;br&gt;Agriculture Share of Watershed. This dataset depicts agricultural area as a share of total watershed area. The share of each watershed that is agricultural was calculated by applying a weighted percentage to each PAGE agricultural land cover class.&lt;/br&gt;  &lt;br&gt;Area Free of Soil Constraints. The data show the proportional area within the PAGE agricultural extent that is free from soil constraints. The area free of soil constraints is based on fertility capability classification (FCC) app lied to FAO's Digital Soil Map of the World (1995).&lt;/br&gt;  &lt;br&gt;Outline of Land and Water Area. These data are used to provide a boundary for land areas and facilitate the readability of maps.&lt;/br&gt;", "keywords": ["Pilot Analysis of Global Ecosystems (PAGE)", "Agroecosystems"], "contacts": [{"organization": "Wood, Stanley, Sebastian, Kate, Scherr, Sara,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.7910/DVN/ZTMDUR"}, {"rel": "self", "type": "application/geo+json", "title": "10.7910/DVN/ZTMDUR", "name": "item", "description": "10.7910/DVN/ZTMDUR", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.7910/DVN/ZTMDUR"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-01-01T00:00:00Z"}}, {"id": "11369/372709", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:30Z", "type": "Journal Article", "created": "2018-09-07", "title": "Soil resources and element stocks in drylands to face global issues", "description": "Abstract<p>Drylands (hyperarid, arid, semiarid, and dry subhumid ecosystems) cover almost half of Earth\uffe2\uff80\uff99s land surface and are highly vulnerable to environmental pressures. Here we provide an inventory of soil properties including carbon (C), nitrogen (N), and phosphorus (P) stocks within the current boundaries of drylands, aimed at serving as a benchmark in the face of future challenges including increased population, food security, desertification, and climate change. Aridity limits plant production and results in poorly developed soils, with coarse texture, low C:N and C:P, scarce organic matter, and high vulnerability to erosion. Dryland soils store 646 Pg of organic C to 2\uffe2\uff80\uff89m, the equivalent of 32% of the global soil organic C pool. The magnitude of the historic loss of C from dryland soils due to human land use and cover change and their typically low C:N and C:P suggest high potential to build up soil organic matter, but coarse soil textures may limit protection and stabilization processes. Restoring, preserving, and increasing soil organic matter in drylands may help slow down rising levels of atmospheric carbon dioxide by sequestering C, and is strongly needed to enhance food security and reduce the risk of land degradation and desertification.</p", "keywords": ["2. Zero hunger", "0301 basic medicine", "Conservation of Natural Resources", "0303 health sciences", "Multidisciplinary", "Nitrogen", "Climate", "Climate Change", "Phosphorus", "15. Life on land", "Article", "Carbon", "Food Supply", "Soil", "03 medical and health sciences", "element cycles", "13. Climate action", "carbon cycle", "Life Science", "Humans", "Desert Climate", "Ecosystem", "geochemistry"]}, "links": [{"href": "https://iris.univr.it/bitstream/11562/1001390/1/Soil%20resources%20and%20element%20stocks%20in%20drylands%20to%20face%20global%20issues.pdf"}, {"href": "https://www.nature.com/articles/s41598-018-32229-0.pdf"}, {"href": "https://doi.org/11369/372709"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Scientific%20Reports", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11369/372709", "name": "item", "description": "11369/372709", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11369/372709"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-09-13T00:00:00Z"}}, {"id": "11379/629705", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:31Z", "type": "Journal Article", "created": "2025-07-19", "title": "Role of Biodegradable and Non-Biodegradable Microplastic in Modulating the toxicological Effects of Organic Pollutants in the Soil Organism Folsomia candida", "description": "Abstract                   <p>                     The ecotoxicological effects of microplastics in soil ecosystems are complex, particularly in areas of intensive agriculture and livestock production, where plant protection products and veterinary drugs commonly coexist with plastic residues. In this study, we investigated the impact, under laboratory conditions, of 3 MP types (non-biodegradable low-density polyethylene (LDPE) and biodegradable polybutylene adipate terephthalate-based (PBAT-based) and a starch-based polymer) on the soil-dwelling species                     Folsomia candida                     (Willem, 1902) in soils contaminated with the anthelmintic albendazole and the fungicide pyraclostrobin. These organic pollutants (OPs) are frequently found in areas of intensive agriculture and livestock production.                     F. candida                     individuals were exposed for 28\uffc2\uffa0days to soils contaminated by the OPs at 0.0001 w/w% (1\uffc2\uffa0mg/kg), with and without MPs at 0.01 and 0.1 w/w% concentrations (100 and 1000\uffc2\uffa0mg/kg respectively), under laboratory conditions (21\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff891 C\uffc2\uffb0, 80%\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff891 RH). Adults\uffe2\uff80\uff99 survival, egg production, and juveniles\uffe2\uff80\uff99 occurrence were recorded as endpoints. Our findings indicate that microplastics alone did not significantly affect the survival and reproductive outcomes of                     F. candida                     . However, in soils contaminated with albendazole and pyraclostrobin, the presence of biodegradable MPs resulted in significant effects compared to the control and the treatment with only microplastics. Specifically, PBAT-based MPs significantly impacted adult survival, juvenile occurrence, and egg counts, while starch-based MPs primarily affected egg counts. On the contrary, co-exposure to OPs and LDPE MPs did not show significant effects. These results suggest that different MPs influence the bioavailability and toxicity of co-occurring fungicides and veterinary drug in soil ecosystems in different ways, with implications for assessing the ecological risks of biodegradable and non-biodegradable plastics in contaminated soils. The potential of MPs to influence the spatial distribution and bioavailability of organic pollutants for soil mesofauna needs further investigation.                   </p", "keywords": ["Soil ecotoxicology", "Pyraclostrobin", "Microplastics (MPs)", "Organic pollutants (OPs)", "Albendazole", "Biodegradable plastics", "Microplastics (MPs)", " Biodegradable plastics", " Organic pollutants (OPs)", " Albendazole", " Pyraclostrobin", " Soil ecotoxicology", " Folsomia candida", "Folsomia candida"]}, "links": [{"href": "https://iris.unibs.it/bitstream/11379/629705/1/s11270-025-08351-x.pdf"}, {"href": "https://doi.org/11379/629705"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Water%2C%20Air%2C%20%26amp%3B%20Soil%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11379/629705", "name": "item", "description": "11379/629705", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11379/629705"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-19T00:00:00Z"}}, {"id": "11572/255256", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:32Z", "type": "Journal Article", "created": "2019-09-23", "title": "Elastica catastrophe machine: theory, design and experiments", "description": "Open Access31 pages, 18 figures", "keywords": ["Nonlinear mechanics; Snap mechanisms; Structural instability", "0203 mechanical engineering", "FOS: Physical sciences", "02 engineering and technology", "Chaotic Dynamics (nlin.CD)", "Nonlinear Sciences - Chaotic Dynamics", "0210 nano-technology"]}, "links": [{"href": "https://iris.unitn.it/bitstream/11572/255256/1/1-s2.0-S002250961930523X-main.pdf"}, {"href": "https://doi.org/11572/255256"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20the%20Mechanics%20and%20Physics%20of%20Solids", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11572/255256", "name": "item", "description": "11572/255256", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11572/255256"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-01T00:00:00Z"}}, {"id": "11586/524923", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:34Z", "type": "Journal Article", "created": "2024-12-03", "title": "Addressing the environmental sustainability of plastics used in agriculture: a multi-actor perspective", "description": "Abstract                   <p>Plastics used in agriculture, commonly known as agriplastics (AP), offer numerous advantages in terrestrial agriculture, forestry, fisheries and aquaculture, but the diffusion of AP-intensive practices has led to extensive pollution. This review aims to synthesise scientific and policy discussions surrounding AP, examining evidence of their benefits and detrimental environmental and agricultural impacts. Following the proposal of a preliminary general taxonomy of AP, this paper presents the findings from a survey conducted among international experts from the plastic industry, farmer organisations, NGOs and environmental research institutes. This analysis highlights knowledge gaps, demands and perspectives for the sustainable future use of AP. Stakeholder positions vary on the options of \uffe2\uff80\uff98rejection\uffe2\uff80\uff99 or \uffe2\uff80\uff98reduction\uffe2\uff80\uff99 of AP, as well as the role of alternative materials such as (bio)degradable and compostable plastics. However, there is consensus on critical issues such as redesign, labelling, traceability, environmental safety standards, deployment and retrieval standards, as well as innovative waste management approaches. All stakeholders express concern for the environment. A \uffe2\uff80\uff98best practice\uffe2\uff80\uff99-based circular model was elaborated capturing these perspectives. In the context of global food systems increasingly reliant on AP, scientists emphasise the need to simultaneously preserve nature-based and traditional knowledge-based sustainable agricultural practices to enhance food system resilience.</p", "keywords": ["multi-actor approach", "330", "Multi-actor approach", "Agriculture", "Environmental technology. Sanitary engineering", "630", "Environmental sciences", "plastic pollution", "plastic waste", "Agriplastics", "Plastic pollution", "Plastic waste", "agriplastics", "GE1-350", "TD1-1066", "agriculture"]}, "links": [{"href": "https://doi.org/11586/524923"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Cambridge%20Prisms%3A%20Plastics", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11586/524923", "name": "item", "description": "11586/524923", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11586/524923"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-12-04T00:00:00Z"}}, {"id": "1808.10328", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:39Z", "type": "Journal Article", "created": "2018-09-05", "title": "Asymptotically Optimal Codes Correcting Fixed-Length Duplication Errors in DNA Storage Systems", "description": "Open AccessTo appear in IEEE Communications Letters", "keywords": ["FOS: Computer and information sciences", "Discrete Mathematics (cs.DM)", "Computer Science - Information Theory", "Information Theory (cs.IT)", "0202 electrical engineering", " electronic engineering", " information engineering", "0102 computer and information sciences", "02 engineering and technology", "94B20", " 94B25", " 94B50", " 94B65", " 68P20", " 68P30", " 68R05", "01 natural sciences", "Computer Science - Discrete Mathematics"]}, "links": [{"href": "https://doi.org/1808.10328"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/IEEE%20Communications%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1808.10328", "name": "item", "description": "1808.10328", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1808.10328"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-11-01T00:00:00Z"}}, {"id": "1854/LU-8732814", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:40Z", "type": "Journal Article", "created": "2021-11-09", "title": "Litter quality, mycorrhizal association, and soil properties regulate effects of tree species on the soil fauna community", "description": "Abstract   Forest management, including selection of appropriate tree species to mitigate climate change and sustain biodiversity, requires a better understanding of factors that affect the composition of soil fauna communities. These communities are an integral part of the soil ecosystem and play an essential role in forest ecosystem functioning related to carbon and nitrogen cycling. Here, by performing a field study across six common gardens in Denmark, we evaluated the effects of tree species identity and mycorrhizal association (i.e., arbuscular mycorrhiza (AM) and ectomycorrhiza (ECM)) on soil fauna (meso- and macrofauna) taxonomic and functional community composition by using diversity, abundance, and biomass as proxies. We found that (1) tree species identity and mycorrhizal association both showed significant effects on soil fauna communities, but the separation between community characteristics in AM and ECM tree species was not entirely consistent; (2) total soil fauna abundance, biomass, as well as taxonomic and functional diversity were generally significantly higher under AM tree species, as well as lime, with higher litter quality (high N and base cation and low lignin:N ratio); (3) tree species significantly influenced the properties of litter, forest floor, and soil, among which litter and/or forest floor N, P, Ca, and Mg concentrations, soil pH, and soil moisture predominantly affected soil fauna abundance, biomass, and taxonomic and functional diversity. Our results from this multisite common garden experiment provide strong and consistent evidence of positive effects of tree species with higher litter quality on soil fauna communities in general, which helps to better understand the effects of tree species selection on soil biodiversity and its functions related to forest soil carbon sequestration.", "keywords": ["DECOMPOSITION", "EARTHWORMS", "Diversity", "PH", "FOREST FLOOR", "Common garden experiment", "Soil meso- and macrofauna", "DIVERSITY", "Biology and Life Sciences", "04 agricultural and veterinary sciences", "15. Life on land", "NITROGEN", "CARBON", "Taxonomic group", "FUNCTIONAL TRAITS", "Abundance", "13. Climate action", "Earth and Environmental Sciences", "Functional group", "0401 agriculture", " forestry", " and fisheries", "BIODIVERSITY", "ABUNDANCE", "Biomass"]}, "links": [{"href": "https://doi.org/1854/LU-8732814"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1854/LU-8732814", "name": "item", "description": "1854/LU-8732814", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1854/LU-8732814"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-01T00:00:00Z"}}, {"id": "1959.7/uws:72836", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:44Z", "type": "Journal Article", "created": "2023-04-24", "title": "Different Cerrado Ecotypes Show Contrasting Soil Microbial Properties, Functioning Rates, and Sensitivity to Changing Water Regimes", "description": "Abstract<p>Soil moisture is among the most important factors regulating soil biodiversity and functioning. Models forecast changes in the precipitation regime in many areas of the planet, but how these changes will influence soil functioning, and how biotic drivers modulate such effects, is far from being understood. We evaluated the responses of C and N fluxes, and soil microbial properties to different soil water regimes in soils from the main three ecotypes of the world's largest and most diverse tropical savanna. Further, we explored the direct and indirect effects of changes in the ecotype and soil water regimes on these key soil processes. Soils from the woodland savanna showed a better nutritional status than the other ecotypes, as well as higher potential N cycling rates, N2O emissions, and soil bacterial abundance but lower bacterial richness, whereas potential CO2 emissions and CH4 uptake peaked in the intermediate savanna. The ecotype also modulated the effects of changes in the soil water regime on nutrient cycling, greenhouse gas fluxes, and soil bacterial properties, with more intense responses in the intermediate savanna. Further, we highlight the existence of multiple contrasting direct and indirect (via soil microbes and abiotic properties) effects of an intensification of the precipitation regime on soil C- and N-related processes. Our results confirm that ecotype is a fundamental driver of soil properties and functioning in the Cerrado and that it can determine the responses of key soil processes to changes in the soil water regime.</p", "keywords": ["2. Zero hunger", "Ecotype", "0301 basic medicine", "Take urgent action to combat climate change and its impacts", "Naturgeografi", "ecotype", "Cerrado", "greenhouse gases.", "04 agricultural and veterinary sciences", "15. Life on land", "precipitation regime", "Precipitation regime", "cerrado", "03 medical and health sciences", "Greenhouse gases", "Physical Geography", "13. Climate action", "N cycle", "XXXXXX - Unknown", "0401 agriculture", " forestry", " and fisheries", "C cycle", "http://metadata.un.org/sdg/13", "cerrado; ecotype; precipitation regime; C cycle; N cycle; greenhouse gases"]}, "links": [{"href": "https://doi.org/1959.7/uws:72836"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecosystems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1959.7/uws:72836", "name": "item", "description": "1959.7/uws:72836", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1959.7/uws:72836"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-04-24T00:00:00Z"}}, {"id": "1F20D517-4F12-4194-B9EC-544A45676839", "type": "Feature", "geometry": null, "properties": {"updated": "2020-02-11T00:00:00Z", "type": "Dataset", "language": "de", "title": "Boden\u00fcbersichtskarte 1:200.000 (B\u00dcK200) - CC7110 Mannheim", "description": "Die Boden\u00fcbersichtskarte 1:200.000 (B\u00dcK200) wird von der Bundesanstalt f\u00fcr Geowissenschaften und Rohstoffe (BGR) in Zusammenarbeit mit den Staatlichen Geologischen Diensten (SGD) der Bundesl\u00e4nder im Blattschnitt der Topographischen \u00dcbersichtskarte 1:200.000 (T\u00dcK200) erarbeitet und in 55 einzelnen Kartenbl\u00e4ttern herausgegeben. Die digitale, blattschnittfreie Datenhaltung bildet eine detaillierte, bundesweit einheitliche und fl\u00e4chendeckende Informationsgrundlage f\u00fcr L\u00e4nder \u00fcbergreifende Aussagen zu Bodennutzung und Bodenschutz. \u00dcber den aktuellen Bearbeitungsstand des Kartenwerks informieren die Internetseiten der BGR zum Thema Boden. Die Verbreitung und Vergesellschaftung der B\u00f6den auf dem Gebiet dieses Kartenblattes wird anhand von 97 Legendeneinheiten (gegliedert nach Bodenregionen und Bodengro\u00dflandschaften) beschrieben. Jede Legendeneinheit beinhaltet bodensystematische Informationen (Bodensubtyp) und Informationen zum Bodenausgangsgestein sowohl f\u00fcr die Leitb\u00f6den als auch f\u00fcr deren Begleiter. Im Rahmen der Qualit\u00e4tssicherung wurde die Linienf\u00fchrung der Bodengrenzen im gesamten Blattgebiet verbessert (Stand 12. Juli 2016).", "formats": [{"name": "PDF"}], "keywords": ["ackerbauliches-ertragspotential", "baden-wu\u0308rttemberg", "boden", "bodenart", "bodenausgangsgestein", "bodenauslaugung", "bodenbearbeitung", "bodenbelastung", "bodenbildung", "bodenbiologie", "bodenchemie", "bodendegradation", "bodendekontamination", "bodeneigenschaften", "bodenerosion", "bodenfeuchtigkeit", "bodenform", "bodenfruchtbarkeit", "bodenfunktion", "bodengefu\u0308ge", "bodengesellschaft", "bodengestaltung", "bodengruppe", "bodengu\u0308te", "bodenhorizont", "bodeninformationssystem", "bodenkarte", "bodenluft", "bodenmechanik", "bodenmineralogie", "bodennutzbarkeit", "bodennutzung", "bodenphysikalische-eigenschaften", "bodenprofil", "bodenskelett", "bodensubstrat", "bodensystematik", "bodentyp", "bodenverbreitung", "de", "durchla\u0308ssigkeit", "effektive-durchwurzelungstiefe", "fachinformationssystem", "hessen", "mannheim", "opendata", "rheinland-pfalz", "saarland", "soil"], "contacts": [{"organization": "Bundesanstalt f\u00fcr Geowissenschaften und Rohstoffe (BGR)", "roles": ["creator"]}]}, "links": [{"href": "https://download.bgr.de/bgr/Boden/BUEK200/7110/jpg/buek200_7110.zip"}, {"href": "https://download.bgr.de/bgr/Boden/BUEK200/7110/pdf/buek200_7110.zip"}, {"href": "https://download.bgr.de/bgr/Boden/BUEK200/7110/png/buek200_7110.zip"}, {"href": "https://download.bgr.de/bgr/Boden/BUEK200/7110/shp/buek200_7110.zip"}, {"href": "https://download.bgr.de/bgr/Boden/BUEK200/7110/tiff/buek200_7110.zip"}, {"href": "http://data.europa.eu/88u/dataset/1f20d517-4f12-4194-b9ec-544a45676839"}, {"rel": "self", "type": "application/geo+json", "title": "1F20D517-4F12-4194-B9EC-544A45676839", "name": "item", "description": "1F20D517-4F12-4194-B9EC-544A45676839", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1F20D517-4F12-4194-B9EC-544A45676839"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"null": "date"}}, {"id": "10.1007/s00442-008-1116-9", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:14:51Z", "type": "Journal Article", "created": "2008-07-31", "title": "Increasing Precipitation Event Size Increases Aboveground Net Primary Productivity In A Semi-Arid Grassland", "description": "Water availability is the primary constraint to aboveground net primary productivity (ANPP) in many terrestrial biomes, and it is an ecosystem driver that will be strongly altered by future climate change. Global circulation models predict a shift in precipitation patterns to growing season rainfall events that are larger in size but fewer in number. This 'repackaging' of rainfall into large events with long intervening dry intervals could be particularly important in semi-arid grasslands because it is in marked contrast to the frequent but small events that have historically defined this ecosystem. We investigated the effect of more extreme rainfall patterns on ANPP via the use of rainout shelters and paired this experimental manipulation with an investigation of long-term data for ANPP and precipitation. Experimental plots (n = 15) received the long-term (30-year) mean growing season precipitation quantity; however, this amount was distributed as 12, six, or four events applied manually according to seasonal patterns for May-September. The long-term mean (1940-2005) number of rain events in this shortgrass steppe was 14 events, with a minimum of nine events in years of average precipitation. Thus, our experimental treatments pushed this system beyond its recent historical range of variability. Plots receiving fewer, but larger rain events had the highest rates of ANPP (184 +/- 38 g m(-2)), compared to plots receiving more frequent rainfall (105 +/- 24 g m(-2)). ANPP in all experimental plots was greater than long-term mean ANPP for this system (97 g m(-2)), which may be explained in part by the more even distribution of applied rain events. Soil moisture data indicated that larger events led to greater soil water content and likely permitted moisture penetration to deeper in the soil profile. These results indicate that semi-arid grasslands are capable of responding immediately and substantially to forecast shifts to more extreme precipitation patterns.", "keywords": ["0106 biological sciences", "2. Zero hunger", "Colorado", "Time Factors", "Rain", "Water", "Carbon Dioxide", "15. Life on land", "Poaceae", "01 natural sciences", "Soil", "13. Climate action", "Seasons", "Ecosystem", "0105 earth and related environmental sciences"], "contacts": [{"organization": "Eugene F. Kelly, Jana L. Heisler-White, Jana L. Heisler-White, Alan K. Knapp,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s00442-008-1116-9"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-008-1116-9", "name": "item", "description": "10.1007/s00442-008-1116-9", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-008-1116-9"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-08-01T00:00:00Z"}}, {"id": "10.5281/zenodo.7948400", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:21:36Z", "type": "Report", "title": "Farm management information systems as tools for revealing management zones inside the fields", "description": "INTRODUCTION and OBJECTIVES: There is a huge need to increase the productivity in agriculture to feed the world\u2019s growing population. However, this increase needs to be achieved in a sustainable way, without jeopardising the ecosystem and environment. Innovations in AgTech are accelerating this process and providing adequate solutions for optimisation of on-field decision-making, but they are often isolated and inaccessible to the farmers. The objective of our work was to design a comprehensive farm management system that takes scientific achievements and enables farmers to use them in their daily operations. MATERIAL and METHOD: In order to digitally transform the Serbian agriculture, we designed AgroSense farm management information system. It was launched in 2017 and has since gathered more than 20,000 users, whose total area equals one fourth of all farmland in Serbia. The platform has a number of modules for weather forecast, historical weather records, digital field books, satellite image processing etc., while the newest addition is the drone image processing module. This module allows 3rd party drone services to scan the fields and upload the data to the platform, after which, the images are processed and analysed. The analysis is directed towards zone management delineation, which is the first step in application of precision agriculture technologies. Zones are detected within the field as areas with homogeneous soil and elevation properties. This is done by applying k-means, an unsupervised machine learning model for clusterisation of data, i.e. pixels in this case. This algorithm minimises the intra-class variance (variance of pixels within the zone) and maximises the inter-class variance (variance between pixels from different classes. This zone delineation can be done on a pixel-level if the objective of zone delineation is e.g. choosing the right locations for soil sampling, or on the level of the tractor swath if the goal is e.g. the variable-rate application of fertiliser. The number of zones and the swath width are variable parameters, left to the user to choose, according to the size of the field, type of the equipment and other factors. RESULTS and CONCLUSIONS: The resulting platform was deployed in 2021 and tested on a number of users. It yielded excellent results and served for optimising the route and sampling location of unmanned ground vehicles (UGVs), characterisation of fields and variable application of fertiliser. Future work includes development of other algorithms for more complex image recognition tasks, such as row detection, leaf area assessment and disease/weed mapping.", "keywords": ["2. Zero hunger", "13. Climate action", "15. Life on land", "drones; precision agriculture; image processing; machine learning"], "contacts": [{"organization": "Marko, Oskar, Brdar, Sanja, Pani\u0107, Marko, Mini\u0107, Vladan, Pejak, Branislav, Crnojevi\u0107, Vladimir,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.7948400"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.7948400", "name": "item", "description": "10.5281/zenodo.7948400", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.7948400"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-06-16T00:00:00Z"}}, {"id": "10.1007/s00382-016-3308-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:14:50Z", "type": "Journal Article", "created": "2016-08-23", "title": "Assessing mid-latitude dynamics in extreme event attribution systems", "description": "Open AccessISSN:1432-0894", "keywords": ["Atmospheric Science", "550", "0207 environmental engineering", "02 engineering and technology", "551", "01 natural sciences", "Dynamics", "[SDU] Sciences of the Universe [physics]", "[SDU.STU.CL] Sciences of the Universe [physics]/Earth Sciences/Climatology", "[SDU]Sciences of the Universe [physics]", "[SDU.STU.CL]Sciences of the Universe [physics]/Earth Sciences/Climatology", "13. Climate action", "Mid-latitudes", "Event attribution; Dynamics; Mid-latitudes; Extreme", "Event attribution", "Extreme", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://centaur.reading.ac.uk/66579/7/art%253A10.1007%252Fs00382-016-3308-z.pdf"}, {"href": "https://doi.org/10.1007/s00382-016-3308-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Climate%20Dynamics", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00382-016-3308-z", "name": "item", "description": "10.1007/s00382-016-3308-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00382-016-3308-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-08-23T00:00:00Z"}}, {"id": "10.1016/j.firesaf.2017.03.052", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:16:06Z", "type": "Journal Article", "created": "2017-04-14", "title": "Self-ignition of natural fuels: Can wildfires of carbon-rich soil start by self-heating?", "description": "Abstract   Carbon-rich soils, like histosols or gelisols, cover more than 3% of the Earth's land surface, and store roughly three times more carbon than the Earth's forests. Carbon-rich soils are reactive porous materials, prone to smouldering combustion if the inert and moisture contents are low enough. An example of soil combustion happens in peatlands, where smouldering wildfires are common in both boreal and tropical regions. This work focuses on understanding soil ignition by self-heating, which is due to spontaneous exothermic reactions in the presence of oxygen under certain thermal conditions. We investigate the effect of soil inorganic content by creating under controlled conditions soil samples with inorganic content (IC) ranging from 3% to 86% of dry weight: we use sand as a surrogate of inorganic matter and peat as a surrogate of organic matter. This range is very wide and covers all IC values of known carbon-rich soils on Earth. The experimental results show that self-heating ignition in different soil types is possible, even with the 86% inorganic content, but the tendency to ignite decreases quickly with increasing IC. We report a clear increase in ambient temperature required for ignition as the IC increases. Combining results from 39 thermostatically-controlled oven experiments, totalling 401\u00a0h of heating time, with the Frank-Kamenetskii theory of ignition, the lumped chemical kinetic and thermal parameters are determined. We then use these parameters to upscale the laboratory experiments to soil layers of different thicknesses for a range of ambient temperatures ranging from 0\u00a0\u00b0C to 40\u00a0\u00b0C. The analysis predicts the critical soil layer thicknesses in nature for self-ignition at various possible environmental temperatures. For example, at 40\u00a0\u00b0C a soil layer of 3% inorganic content can be ignited through self-heating if it is thicker than 8.8\u00a0m, but at 86% IC the layer has to be 1.8\u00a0km thick, which is impossible to find in nature. We estimate that the critical IC for a ambient temperature of 40\u00a0\u00b0C and soil thickness of 50\u00a0m is 68%. Because those are extreme values of temperature and thickness, no self-heating ignition of soil can be expected above the 68% threshold of inorganic content. This is the first in-depth experimental quantification of soil self-heating and shows that indeed it is possible that wildfires are initiated by self-heating in some soil types and conditions.", "keywords": ["Technology", "Engineering", " Civil", "550", "Materials Science", "PEAT", "0904 Chemical Engineering", "Materials Science", " Multidisciplinary", "MOISTURE", "Civil Engineering", "7. Clean energy", "Wildfires", "Soil", "COAL", "Engineering", "Smouldering", "FIRES", "Multidisciplinary", "Science & Technology", "Civil", "624", "15. Life on land", "Ignition", "13. Climate action", "SPREAD", "BEHAVIOR", "SMOLDERING COMBUSTION"]}, "links": [{"href": "https://doi.org/10.1016/j.firesaf.2017.03.052"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Fire%20Safety%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.firesaf.2017.03.052", "name": "item", "description": "10.1016/j.firesaf.2017.03.052", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.firesaf.2017.03.052"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-07-01T00:00:00Z"}}, {"id": "10.1016/j.foodhyd.2022.107958", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:16:06Z", "type": "Journal Article", "created": "2022-07-09", "title": "Prebiotic potential of apple pomace and pectins from different apple varieties: Modulatory effects on key target commensal microbial populations.", "description": "Open AccessPeer reviewed", "keywords": ["2. Zero hunger", "0301 basic medicine", "0303 health sciences", "03 medical and health sciences", "Prebiotics", "Microbiota", "Apple pomace", "Pectin", "12. Responsible consumption", "3. Good health"]}, "links": [{"href": "https://doi.org/10.1016/j.foodhyd.2022.107958"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Food%20Hydrocolloids", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.foodhyd.2022.107958", "name": "item", "description": "10.1016/j.foodhyd.2022.107958", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.foodhyd.2022.107958"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-12-01T00:00:00Z"}}, {"id": "10.1016/j.foodpol.2010.11.009", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:16:06Z", "type": "Journal Article", "created": "2011-01-23", "title": "The New Competition For Land: Food, Energy, And Climate Change", "description": "Abstract   The paper addresses the new competition for land arising from growing and changing demand for food when combined with increasing global demand for transport energy, under conditions of declining petro-chemical resources and the urgent need to reduce greenhouse gas emissions. The paper starts from the premise of a \u2018food, energy and environment trilemma\u2019 ( Tilman et al., 2009 ), where all demands to expand the area of cultivated land present high risks of increasing the carbon footprint of agriculture. Having reviewed the main drivers of demand for food and for liquid transport fuels, the paper weighs the controversies surrounding biofuels arising from food-price spikes, the demand for land, and consequent direct and indirect land-use change. It suggests that we need a more complex, and geographically differentiated, analysis of the interactions between direct and indirect land-use change. The paper then reviews evidence of land availability, and suggests that in addition to technical availability in terms of soil, water, and climate, political, social, and technological factors have significantly shaped the competition for land in different global regions, particularly the three major biofuel producing ones of the USA, Brazil and Europe. This point is further developed by reviewing the different innovation pathways for biofuels in these three regions. The main conclusion of this review is firstly that any analysis requires an integrated approach to the food-energy-environment trilemma, and secondly that strategic political direction of innovation and sustainability regulation are required to bring about major shifts in agriculture leading to sustainable intensification of cultivation ( Royal Society, 2009 ), rather than the continued expansion of cultivated area. The consequent perspective is one of considerable global variety in technologies, agricultural productive systems, and use of natural resources. This contrasts sharply with the world of a dominant global and integrated technology platform based on petro-chemicals to which we have become accustomed.", "keywords": ["2. Zero hunger", "330", "food", "0211 other engineering and technologies", "HM Sociology", "02 engineering and technology", "15. Life on land", "7. Clean energy", "630", "biofuels", "innovation", "12. Responsible consumption", "competition for land", "climate change", "13. Climate action", "11. Sustainability", "0202 electrical engineering", " electronic engineering", " information engineering"]}, "links": [{"href": "https://doi.org/10.1016/j.foodpol.2010.11.009"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Food%20Policy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.foodpol.2010.11.009", "name": "item", "description": "10.1016/j.foodpol.2010.11.009", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.foodpol.2010.11.009"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-01-01T00:00:00Z"}}, {"id": "10.3390/plants13070970", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:19:43Z", "type": "Journal Article", "created": "2024-03-27", "title": "Shipwrecked on the Rock, or Not Quite: Gypsophytes and Edaphic Islands", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Species\u2013area relationships (SAR) constitute a key aspect of ecological theory and are integral to other scientific disciplines, such as biogeography, which have played a crucial role in advancing biology. The theory of insular biogeography provides a clear example. This theory initially expanded from true islands to other types of systems characterized by their insularity. One such approach was linked to geoedaphic islands, as seen in gypsum outcrops. While these continental areas have been considered insular systems, only limited and mostly indirect evidence thereof has been provided. This study utilized SAR to advance the understanding of gypsum outcrops as insular continental territories. It is hereby hypothesized that gypsum outcrops are edaphic islands, although their insular nature depends on the different functional or ecological plant types, and this nature will be reflected in the potential Arrhenius model z values. The results obtained support both hypotheses and provide insight into the ecological factors that help interpret the insularity of these areas. This interpretation goes beyond their mere extent and the distance among outcrops, emphasizing the importance of environmental filters. Said filters vary in permeability depending on the degree of gypsophily, or preference for gypsum, exhibited by different species.</p></article>", "keywords": ["0106 biological sciences", "0301 basic medicine", "gypsum outcrops", "Gypsicolous", "Botany", "gypsovag", "Gypsophily", "15. Life on land", "gypsophile", "gypsicolous", "01 natural sciences", "Article", "03 medical and health sciences", "species\u2013area relationships (SAR)", "QK1-989", "gypsophily", "14. Life underwater", "Gypsophile"]}, "links": [{"href": "https://doi.org/10.3390/plants13070970"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plants", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/plants13070970", "name": "item", "description": "10.3390/plants13070970", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/plants13070970"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-03-27T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2018.11.475", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:16:36Z", "type": "Journal Article", "created": "2018-12-01", "title": "Local topographic and edaphic factors largely predict shrub encroachment in Mediterranean drylands", "description": "Shrub encroachment influences several ecosystem services in drylands worldwide. Yet, commonly used strategies to reduce encroachment show a low medium-term success, calling for a better understanding of its causes. Previous works identified multiple drivers responsible for this phenomenon, including anthropogenic and environmental causes. However, the relative effect of climate, topography and edaphic factors on shrub encroachment is not fully understood nor has been properly quantified in Mediterranean Basin drylands. Also, understanding how these drivers lead to changes in plant communities' functional traits associated to shrub encroachment is crucial, considering traits influence ecosystem processes and associated ecosystem services. Here, we studied the understory of a Mediterranean dryland ecosystem composed of savanna-like Holm-oak woodlands, along a regional climatic gradient. We specifically assessed (i) how climatic, topographic and edaphic factors influence understory relative shrub cover (RSC) and (ii) their direct and indirect effects (via RSC) on plant functional traits. We studied the mean and diversity of 12 functional traits related to plant regeneration, establishment, and dispersal, at the community-level. We found that, under similar low-intensity land use, topographic and edaphic factors, namely slope variations and soil C:N ratio, were the most important predictors of shrub encroachment, determining communities' functional characteristics. Climate, namely summer precipitation, had a much lesser influence. Our model explained 52% of the variation in relative shrub cover. Climate had a stronger effect on a set of functional traits weakly involved in shrub encroachment, related to flowering and dispersal strategies. We show that shrub encroachment is largely predicted by topo-edaphic factors in Mediterranean drylands subject to conventional low-intensity land use. Hence, management strategies to reduce encroachment need to take these drivers into account for efficient forecasting and higher cost-effectiveness. Our results suggest that climate change might not greatly impact shrub encroachment in the Mediterranean Basin, but may affect functional structure and reduce functional diversity of plant communities, thus affecting ecosystem functioning.", "keywords": ["0106 biological sciences", "2. Zero hunger", "Geography", "Portugal", "Plant Dispersal", "Climate Change", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "Soil", "climate change", "aridity", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "functional traits", "holm-oak", "Ecosystem"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2018.11.475"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2018.11.475", "name": "item", "description": "10.1016/j.scitotenv.2018.11.475", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2018.11.475"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-03-01T00:00:00Z"}}, {"id": "10.1002/2017JD027346", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:14:28Z", "type": "Journal Article", "created": "2017-12-28", "title": "Soil Moisture-Temperature Coupling in a Set of Land Surface Models", "description": "Abstract<p>The land surface controls the partitioning of water and energy fluxes and therefore plays a crucial role in the climate system. The coupling between soil moisture and air temperature, in particular, has been shown to affect the severity and occurrence of temperature extremes and heat waves. Here we study soil moisture\uffe2\uff80\uff90temperature coupling in five land surface models, focusing on the terrestrial segment of the coupling in the warm season. All models are run off\uffe2\uff80\uff90line over a common period with identical atmospheric forcing data, in order to allow differences in the results to be attributed to the models' partitioning of energy and water fluxes. Coupling is calculated according to two semiempirical metrics, and results are compared to observational flux tower data. Results show that the locations of the global hot spots of soil moisture\uffe2\uff80\uff90temperature coupling are similar across all models and for both metrics. In agreement with previous studies, these areas are located in transitional climate regimes. The magnitude and local patterns of model coupling, however, can vary considerably. Model coupling fields are compared to tower data, bearing in mind the limitations in the geographical distribution of flux towers and the differences in representative area of models and in situ data. Nevertheless, model coupling correlates in space with the tower\uffe2\uff80\uff90based results (r = 0.5\uffe2\uff80\uff930.7), with the multimodel mean performing similarly to the best\uffe2\uff80\uff90performing model. Intermodel differences are also found in the evaporative fractions and may relate to errors in model parameterizations and ancillary data of soil and vegetation characteristics.</p>", "keywords": ["ENVIRONMENT SIMULATOR JULES", "FLUXES", "0207 environmental engineering", "02 engineering and technology", "01 natural sciences", "CO2 EXCHANGE", "models", "WATER", "SCALE", "Research Articles", "0105 earth and related environmental sciences", "land surface", "CARBON-DIOXIDE EXCHANGE", "eartH2Observe", "temperature", "15. Life on land", "DECIDUOUS FOREST", "CLIMATE", "EVAPORATION", "VARIABILITY", "13. Climate action", "Earth and Environmental Sciences", "BALANCE", "land surface models", "SENSIBLE HEAT", "land-atmosphere interactions", "soil moisture"]}, "links": [{"href": "https://agupubs.onlinelibrary.wiley.com/doi/pdf/10.1002/2017JD027346"}, {"href": "https://doi.org/10.1002/2017JD027346"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Geophysical%20Research%3A%20Atmospheres", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/2017JD027346", "name": "item", "description": "10.1002/2017JD027346", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/2017JD027346"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-02-01T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=EC&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=EC&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=EC&", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=EC&offset=50", "hreflang": "en-US"}], "numberMatched": 8198, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-10-25T10:54:03.142076Z"}