{"type": "FeatureCollection", "features": [{"id": "10.5061/dryad.pb271", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:20:05Z", "type": "Dataset", "title": "Data from: Interactions among roots, mycorrhizae and free-living microbial communities differentially impact soil carbon processes", "description": "unspecifiedPlant roots, their associated microbial community and free-living soil microbes interact to regulate the movement of carbon from the soil to the atmosphere, one of the most important and least understood fluxes of terrestrial carbon. Our inadequate understanding of how plant\u2013microbial interactions alter soil carbon decomposition may lead to poor model predictions of terrestrial carbon feedbacks to the atmosphere. Roots, mycorrhizal fungi and free-living soil microbes can alter soil carbon decomposition through exudation of carbon into soil. Exudates of simple carbon compounds can increase microbial activity because microbes are typically carbon limited. When both roots and mycorrhizal fungi are present in the soil, they may additively increase carbon decomposition. However, when mycorrhizas are isolated from roots, they may limit soil carbon decomposition by competing with free-living decomposers for resources. We manipulated the access of roots and mycorrhizal fungi to soil in situ in a temperate mixed deciduous forest. We added 13C-labelled substrate to trace metabolized carbon in respiration and measured carbon-degrading microbial extracellular enzyme activity and soil carbon pools. We used our data in a mechanistic soil carbon decomposition model to simulate and compare the effects of root and mycorrhizal fungal presence on soil carbon dynamics over longer time periods. Contrary to what we predicted, root and mycorrhizal biomass did not interact to additively increase microbial activity and soil carbon degradation. The metabolism of 13C-labelled starch was highest when root biomass was high and mycorrhizal biomass was low. These results suggest that mycorrhizas may negatively interact with the free-living microbial community to influence soil carbon dynamics, a hypothesis supported by our enzyme results. Our steady-state model simulations suggested that root presence increased mineral-associated and particulate organic carbon pools, while mycorrhizal fungal presence had a greater influence on particulate than mineral-associated organic carbon pools. Synthesis. Our results suggest that the activity of enzymes involved in organic matter decomposition was contingent upon root\u2013mycorrhizal\u2013microbial interactions. Using our experimental data in a decomposition simulation model, we show that root\u2013mycorrhizal\u2013microbial interactions may have longer-term legacy effects on soil carbon sequestration. Overall, our study suggests that roots stimulate microbial activity in the short term, but contribute to soil carbon storage over longer periods of time.", "keywords": ["2. Zero hunger", "roots", "13. Climate action", "simulation model", "carbon dynamics", "Rhizosphere", "stable isotope", "plant-soil (belowground) interactions", "15. Life on land", "extra-cellular enzyme activity", "mycorrhizae"], "contacts": [{"organization": "Moore, Jessica A. M., Jiang, Jiang, Patterson, Courtney M., Wang, Gangsheng, Mayes, Melanie A., Classen, Aim\u00e9e T.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.pb271"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.pb271", "name": "item", "description": "10.5061/dryad.pb271", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.pb271"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-14T00:00:00Z"}}, {"id": "10.1002/2017gb005693", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:14:28Z", "type": "Journal Article", "created": "2017-10-02", "title": "Release of Black Carbon From Thawing Permafrost Estimated by Sequestration Fluxes in the East Siberian Arctic Shelf Recipient", "description": "Abstract

Black carbon (BC) plays an important role in carbon burial in marine sediments globally. Yet the sequestration of BC in the Arctic Ocean is poorly understood. Here we assess the concentrations, fluxes, and sources of soot BC (SBC)\uffe2\uff80\uff94the most refractory component of BC\uffe2\uff80\uff94in sediments from the East Siberian Arctic Shelf (ESAS), the World's largest shelf sea system. SBC concentrations in the contemporary shelf sediments range from 0.1 to 2.1\uffc2\uffa0mg\uffc2\uffa0g\uffe2\uff88\uff921\uffc2\uffa0dw, corresponding to 2\uffe2\uff80\uff9312% of total organic carbon. The 210Pb\uffe2\uff80\uff90derived fluxes of SBC (0.42\uffe2\uff80\uff9311\uffc2\uffa0g\uffc2\uffa0m\uffe2\uff88\uff922\uffc2\uffa0yr\uffe2\uff88\uff921) are higher or in the same range as fluxes reported for marine surface sediments closer to anthropogenic emissions. The total burial flux of SBC in the ESAS (~4,000\uffc2\uffa0Gg\uffc2\uffa0yr\uffe2\uff88\uff921) illustrates the great importance of this Arctic shelf in marine sequestration of SBC. The radiocarbon signal of the SBC shows more depleted yet also more uniform signatures (\uffe2\uff88\uff92721 to \uffe2\uff88\uff92896\uffe2\uff80\uffb0; average of \uffe2\uff88\uff92774\uffc2\uffa0\uffc2\uffb1\uffc2\uffa062\uffe2\uff80\uffb0) than of the non\uffe2\uff80\uff90SBC pool (\uffe2\uff88\uff92304 to \uffe2\uff88\uff92728\uffe2\uff80\uffb0; average of \uffe2\uff88\uff92491\uffc2\uffa0\uffc2\uffb1\uffc2\uffa0163\uffe2\uff80\uffb0), suggesting that SBC is coming from an, on average, 5,900\uffc2\uffa0\uffc2\uffb1\uffc2\uffa0300\uffc2\uffa0years older and more specific source than the non\uffe2\uff80\uff90SBC pool. We estimate that the atmospheric BC input to the ESAS is negligible (~0.6% of the SBC burial flux). Statistical source apportionment modeling suggests that the ESAS sedimentary SBC is remobilized by thawing of two permafrost carbon (PF/C) systems: surface soil permafrost (topsoil/PF; 25\uffc2\uffa0\uffc2\uffb1\uffc2\uffa08%) and Pleistocene ice complex deposits (ICD/PF; 75\uffc2\uffa0\uffc2\uffb1\uffc2\uffa08%). The SBC contribution to the total mobilized permafrost carbon (PF/C) increases with increasing distance from the coast (from 5 to 14%), indicating that the SBC is more recalcitrant than other forms of translocated PF/C. These results elucidate for the first time the key role of permafrost thaw in the transport of SBC to the Arctic Ocean. With ongoing global warming, these findings have implications for the biogeochemical carbon cycle, increasing the size of this refractory carbon pool in the Arctic Ocean.Anthropogenic pressures on tropical forests are rapidly intensifying, but our understanding of their implications for biological diversity is still very limited, especially with regard to soil biota, and in particular soil bacterial communities. Here we evaluated bacterial community composition and diversity across a gradient of land use intensity in the eastern Amazon from undisturbed primary forest, through primary forests varyingly disturbed by fire, regenerating secondary forest, pasture, and mechanized agriculture. Soil bacteria were assessed by paired\uffe2\uff80\uff90end Illumina sequencing of 16S rRNA gene fragments (V4 region). The resulting sequences were clustered into operational taxonomic units (OTU) at a 97% similarity threshold. Land use intensification increased the observed bacterial diversity (both OTU richness and community heterogeneity across space) and this effect was strongly associated with changes in soil pH. Moreover, land use intensification and subsequent changes in soil fertility, especially pH, altered the bacterial community composition, with pastures and areas of mechanized agriculture displaying the most contrasting communities in relation to undisturbed primary forest. Together, these results indicate that tropical forest conversion impacts soil bacteria not through loss of diversity, as previously thought, but mainly by imposing marked shifts on bacterial community composition, with unknown yet potentially important implications for ecological functions and services performed by these communities.

", "keywords": ["Rios de composi\u00e7\u00e3o de comunidade bacteriana", "2. Zero hunger", "0301 basic medicine", "570", "0303 health sciences", "550", "Bacteria", "Biodiversidade subterr\u00e2nea", "Agriculture", "Biodiversity", "Forests", "15. Life on land", "Below\u2010ground biodiversity", "High\u2010throughput sequencing", "Soil", "03 medical and health sciences", "RNA", " Ribosomal", " 16S", "Sequenciamento de alto rendimento", "Rivers of bacterial community composition", "Soil Microbiology"]}, "links": [{"href": "https://eprints.lancs.ac.uk/id/eprint/82660/1/de_Carvalho_et_al_2016_raw_pdf.pdf"}, {"href": "https://doi.org/10.1002/ecy.1513"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ecy.1513", "name": "item", "description": "10.1002/ecy.1513", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ecy.1513"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-09T00:00:00Z"}}, {"id": "10.5061/dryad.f542t16", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:20:03Z", "type": "Dataset", "title": "Data from: Grazing and resource availability control soil nematode body size and abundance-mass relationship in semi-arid grassland", "description": "unspecified1. Body size is a central functional trait in ecological communities. Despite recognition of the importance of above-belowground interactions, effects of aboveground herbivores on size and abundance-size relationships in soil fauna are almost uncharted. Depending on climate and soil properties, herbivores may increase basal resources of soil food webs, or reduce pore space, mechanisms expected to have contrasting effects on soil animal body size. 2. We investigated how body size and shape of soil nematodes responded to mammalian grazers in three semi-arid grassland sites, along a gradient of soil texture and organic matter (OM) in a long-term herbivore removal study. We analysed nematode mass, length, diameter, body size distribution, and biomass distribution. We formulated two mechanistic hypotheses to assess whether resource availability or pore space was the dominant abiotic control and modulated the effects of grazing. 3. In ungrazed soils, average and maximum nematode size, as well as abundance and biomass of large nematodes, were greater in the high-OM than in the low-OM soil, and intermediate in the medium-OM soil. Grazing promoted larger sizes in the low-OM soil, where it had been shown to increase organic matter and microbial biomass, and led to more homogeneous average size and body size distribution across sites. The results support the hypothesis that nematode size was controlled by basal resource availability rather than by pore space. However, body shape might have been constrained by small pores in the fine-texture, high-OM soil, where nematodes were more elongated. 4. Grazing may facilitate larger sizes in soil nematode communities by boosting basal resources where these are limiting, with important implications for estimations of nematode biomass and contribution to carbon and nutrient cycling. These findings contribute to the insofar-limited mechanistic understanding of how herbivores can shape functional traits of soil fauna, and demonstrate that animals at one trophic level may control patterns in body size and abundance-size relationships in other trophic levels without a direct predator-prey or competitive linkage between them.", "keywords": ["2. Zero hunger", "Individual size distribution", "Soil texture", "Aboveground-belowground interactions", "15. Life on land", "Mammalian herbivores", "organic matter", "Soil fauna"], "contacts": [{"organization": "Andriuzzi, Walter S., Wall, Diana H.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.f542t16"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.f542t16", "name": "item", "description": "10.5061/dryad.f542t16", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.f542t16"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-05-17T00:00:00Z"}}, {"id": "012ce7af-7212-41e1-96da-a38fbd32fd7c", "type": "Feature", "geometry": null, "properties": {"updated": "2025-08-09T09:20:29.683803", "type": "Dataset", "language": "it", "title": "MODELLO WRF-ARW a 3km - Temperatura del suolo (C) - (2025-08-09 ore 00 UTC).", "description": "Temperatura del suolo (C). 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