{"type": "FeatureCollection", "facets": {"type": {"type": "terms", "property": "type", "buckets": [{"value": "Journal Article", "count": 75}, {"value": "Report", "count": 3}, {"value": "Dataset", "count": 1}, {"value": "Software", "count": 1}, {"value": null, "count": 1}]}, "soil_chemical_properties": {"type": "terms", "property": "soil_chemical_properties", "buckets": [{"value": "methane", "count": 11}, {"value": "cadmium", "count": 5}, {"value": "zinc", "count": 5}, {"value": "nitrate", "count": 4}, {"value": "copper", "count": 3}, {"value": "carbon", "count": 2}, {"value": "iron", "count": 2}, {"value": "sulphur", "count": 2}, {"value": "ammonia", "count": 1}, {"value": "soil organic matter", "count": 1}]}, "soil_biological_properties": {"type": "terms", "property": "soil_biological_properties", "buckets": [{"value": "respiration", "count": 3}, {"value": "microbiome", "count": 1}, {"value": "plants", "count": 1}, {"value": "vegetation", "count": 1}]}, "soil_physical_properties": {"type": "terms", "property": "soil_physical_properties", "buckets": [{"value": "water", "count": 1}]}, "soil_classification": {"type": "terms", "property": "soil_classification", "buckets": []}, "soil_functions": {"type": "terms", "property": "soil_functions", "buckets": [{"value": "plant nutrients", "count": 2}]}, "soil_threats": {"type": "terms", "property": "soil_threats", "buckets": [{"value": "soil erosion", "count": 2}, {"value": "soil pollution", "count": 2}, {"value": "waterlogging", "count": 2}, {"value": "land degradation", "count": 1}]}, "soil_processes": {"type": "terms", "property": "soil_processes", "buckets": [{"value": "sedimentation", "count": 81}, {"value": "biochemical processes", "count": 1}]}, "soil_management": {"type": "terms", "property": "soil_management", "buckets": []}, "ecosystem_services": {"type": "terms", "property": "ecosystem_services", "buckets": [{"value": "energy transformations", "count": 2}]}}, "features": [{"id": "10.2134/jeq2007.0197", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:20:33Z", "type": "Journal Article", "created": "2008-02-12", "description": "Abstract<p>Within Canada, it has been recognized in the last decade that military training activities may have impacts on the environmental quality of training ranges. However, impacts of activities specific to Air Force Bases have not yet been intensely documented. A hydrogeological study was accomplished at the Cold Lake Air Weapons Range, Alberta, to evaluate the environmental impacts of using bombs, rockets, strafing, and open burning/open detonation (OB/OD) on the quality of soil, ground water, surface water, and lake sediments. Samples were analyzed for metals, anions, ammonium perchlorate (NH4ClO4), and energetic materials (EM). It was found that training activities did not result in measured values being exceeded on the basis of guidance values for surface water and lake sediments. Contamination by metals was mostly limited to soils, and some metals may be related to the use of bombs (Cd, Cu, Pb), strafe (Cu), and rockets (As, Ba, Cd, Cr, Cu, Fe, Ni, Pb, U, V, Zn). TNT (2,4,6\uffe2\uff80\uff90trinitrotoluene) was the main EM found in soils, while RDX (hexahydro\uffe2\uff80\uff901,3,5\uffe2\uff80\uff90trinitro\uffe2\uff80\uff901,3,5\uffe2\uff80\uff90triazine) was more common in ground water. Both are related to live bombing, while nitroglycerine (NG) is related to rocket use and was detected in soils only. Aluminum, nitrate, and ammonium perchlorate detected in ground water may be related to live bombing or rockets. OB/OD operations resulted in the presence of various EM in soils, and of perchlorate and nitrate in ground water. Contamination by metals and explosives in soils was localized around the targets and varied significantly in time; however, in ground water it was more constant and may persist for a period of several years after a target has been removed.</p>", "keywords": ["Anions", "Geologic Sediments", "550", "lake sediments", "Fresh Water", "Environment", "01 natural sciences", "Alberta", "Explosive Agents", "Water Supply", "Soil Pollutants", "0105 earth and related environmental sciences", "Nitrates", "Perchlorates", "04 agricultural and veterinary sciences", "nitroglycerine", "ammonium perchlorate", "Quaternary Ammonium Compounds", "Metals", "13. Climate action", "open detonation", "0401 agriculture", " forestry", " and fisheries", "Weapons", "Water Pollutants", " Chemical", "Environmental Monitoring", "Trinitrotoluene"]}, "links": [{"href": "https://doi.org/10.2134/jeq2007.0197"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Environmental%20Quality", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2134/jeq2007.0197", "name": "item", "description": "10.2134/jeq2007.0197", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2134/jeq2007.0197"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-03-01T00:00:00Z"}}, {"id": "10.2134/jeq2010.0168", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:20:34Z", "type": "Journal Article", "created": "2011-04-26", "title": "Agroforestry Buffers For Nonpoint Source Pollution Reductions From Agricultural Watersheds", "description": "Despite increased attention and demand for the adoption of agroforestry practices throughout the world, rigorous long-term scientific studies confirming environmental benefits from the use of agroforestry practices are limited. The objective was to examine nonpoint-source pollution (NPSP) reduction as influenced by agroforestry buffers in watersheds under grazing and row crop management. The grazing study consists of six watersheds in the Central Mississippi Valley wooded slopes and the row crop study site consists of three watersheds in a paired watershed design in Central Claypan areas. Runoff water samples were analyzed for sediment, total nitrogen (TN), and total phosphorus (TP) for the 2004 to 2008 period. Results indicate that agroforestry and grass buffers on grazed and row crop management sites significantly reduce runoff, sediment, TN, and TP losses to streams. Buffers in association with grazing and row crop management reduced runoff by 49 and 19%, respectively, during the study period as compared with respective control treatments. Average sediment loss for grazing and row crop management systems was 13.8 and 17.9 kg ha yr, respectively. On average, grass and agroforestry buffers reduced sediment, TN, and TP losses by 32, 42, and 46% compared with the control treatments. Buffers were more effective in the grazing management practice than row crop management practice. These differences could in part be attributed to the differences in soils, management, and landscape features. Results from this study strongly indicate that agroforestry and grass buffers can be designed to improve water quality while minimizing the amount of land taken out of production.", "keywords": ["2. Zero hunger", "Geologic Sediments", "Missouri", "Nitrogen", "Water Pollution", "Agriculture", "Forestry", "Fresh Water", "Phosphorus", "04 agricultural and veterinary sciences", "15. Life on land", "Poaceae", "6. Clean water", "Trees", "Rivers", "13. Climate action", "Water Movements", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "https://doi.org/10.2134/jeq2010.0168"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Environmental%20Quality", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2134/jeq2010.0168", "name": "item", "description": "10.2134/jeq2010.0168", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2134/jeq2010.0168"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-05-01T00:00:00Z"}}, {"id": "10.3168/jds.2010-3635", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:05Z", "type": "Journal Article", "created": "2011-02-20", "title": "Effects Of A Combination Of Feed Additives On Methane Production, Diet Digestibility, And Animal Performance In Lactating Dairy Cows", "description": "Two experiments were conducted to assess the effects of a mixture of dietary additives on enteric methane production, rumen fermentation, diet digestibility, energy balance, and animal performance in lactating dairy cows. Identical diets were fed in both experiments. The mixture of feed additives investigated contained lauric acid, myristic acid, linseed oil, and calcium fumarate. These additives were included at 0.4, 1.2, 1.5, and 0.7% of dietary dry matter, respectively (treatment ADD). Experimental fat sources were exchanged for a rumen inert source of fat in the control diet (treatment CON) to maintain isolipidic rations. Cows (experiment 1, n=20; experiment 2, n=12) were fed restricted amounts of feed to avoid confounding effects of dry matter intake on methane production. In experiment 1, methane production and energy balance were studied using open-circuit indirect calorimetry. In experiment 2, 10 rumen-fistulated animals were used to measure rumen fermentation characteristics. In both experiments animal performance was monitored. The inclusion of dietary additives decreased methane emissions (g/d) by 10%. Milk yield and milk fat content tended to be lower for ADD in experiment 1. In experiment 2, milk production was not affected by ADD, but milk fat content was lower. Fat- and protein-corrected milk was lower for ADD in both experiments. Milk urea nitrogen content was lowered by ADD in experiment 1 and tended to be lower in experiment 2. Apparent total tract digestibility of fat, but not that of starch or neutral detergent fiber, was higher for ADD. Energy retention did not differ between treatments. The decrease in methane production (g/d) was not evident when methane emission was expressed per kilogram of milk produced. Feeding ADD resulted in increases of C12:0 and C14:0 and the intermediates of linseed oil biohydrogenation in milk in both experiments. In experiment 2, ADD-fed cows tended to have a decreased number of protozoa in rumen fluid when compared with that in control cows. Total volatile fatty acid concentrations were lower for ADD, whereas molar proportions of propionate increased at the expense of acetate and butyrate.", "keywords": ["chain fatty-acids", "Linseed Oil", "Rumen", "extruded linseed", "Myristic Acid", "0403 veterinary science", "crude linseed", "Fumarates", "fumaric-acid", "ruminal methanogenesis", "Animals", "Lactation", "myristic acid", "beef-cattle", "coconut oil", "2. Zero hunger", "0402 animal and dairy science", "Lauric Acids", "04 agricultural and veterinary sciences", "linseed oil", "Animal Feed", "Diet", "Fermentation", "Cattle", "Digestion", "Female", "Food Additives", "detergent fiber", "Energy Metabolism", "Methane"]}, "links": [{"href": "https://doi.org/10.3168/jds.2010-3635"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Dairy%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3168/jds.2010-3635", "name": "item", "description": "10.3168/jds.2010-3635", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3168/jds.2010-3635"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-03-01T00:00:00Z"}}, {"id": "10.2527/2004.82113346x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:00Z", "type": "Journal Article", "created": "2016-08-09", "description": "Methane emitted from the livestock sector contributes to greenhouse gas (GHG) emissions. Understanding the effects of diet on enteric methane production can help refine GHG emission inventories and identify viable GHG reduction strategies. Our study focused on measuring methane and carbon dioxide emissions, total-tract digestibility, and ruminal fermentation in growing beef cattle fed a diet supplemented with various additives or ingredients. Two experiments, each designed as a 4 x 4 Latin square with 21-d periods, were conducted using 16 Holstein steers (initial BW 311.6 +/- 12.3 kg). In Exp. 1, treatments were control (no additive), monensin (Rumensin, Elanco Animal Health, Indianapolis, IN; 33 mg/kg DM), sunflower oil (400 g/d, approximately 5% of DMI), and proteolytic enzyme (Protex 6-L, Genencor Int., Inc., CA; 1 mL/kg DM). In Exp. 2, treatments were control (no additive), Procreatin-7 yeast (Prince Agri Products, Inc., Quincy, IL; 4 g/d), Levucell SC yeast (Lallemand, Inc., Rexdale, Ontario, Canada; 1 g/d), and fumaric acid (Bartek Ingredients Inc., Stoney Creek, Ontario, Canada; 80 g/d). The basal diet consisted of 75% barley silage, 19% steam-rolled barley grain, and 6% supplement (DM basis). Four large chambers (two animals per chamber) were equipped with lasers and infrared gas analyzers to measure methane and carbon dioxide, respectively, for 3 d each period. Total-tract digestibility was determined using chromic oxide. Approximately 6.5% of the GE consumed was lost in the form of methane emissions from animals fed the control diet. In Exp. 1, sunflower oil decreased methane emissions by 22% (P = 0.001) compared with the control, whereas monensin (P = 0.44) and enzyme had no effect (P = 0.82). However, oil decreased (P = 0.03) the total-tract digestibility of NDF by 20%. When CH(4) emissions were corrected for differences in energy intake, the loss of GE to methane was decreased by 21% (P = 0.002) using oil and by 9% (P = 0.09) using monensin. In Exp. 2, Procreatin-7 yeast (P = 0.72), Levucell SC yeast (P = 0.28), and fumaric acid (P = 0.21) had no effect on methane emissions, although emissions as a percentage of GE intake were 3% (non-significant, P = 0.39) less for steers fed Procreatin-7 yeast compared with the control. This study demonstrates that sunflower oil, ionophores, and possibly some yeast products can be used to decrease the GE lost as methane from cattle, but fiber digestibility is impaired with oil supplementation.", "keywords": ["Male", "2. Zero hunger", "Rumen", "Ionophores", "0402 animal and dairy science", "04 agricultural and veterinary sciences", "Carbon Dioxide", "Animal Feed", "Diet", "Fumarates", "13. Climate action", "Yeasts", "Dietary Supplements", "Fermentation", "Animals", "Plant Oils", "Sunflower Oil", "Cattle", "Digestion", "Monensin", "Methane", "Peptide Hydrolases"], "contacts": [{"organization": "Sean M. McGinn, Karen A. Beauchemin, T. Coates, Dar\u00edo Colombatto,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.2527/2004.82113346x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Animal%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2527/2004.82113346x", "name": "item", "description": "10.2527/2004.82113346x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2527/2004.82113346x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-11-01T00:00:00Z"}}, {"id": "10.2527/2001.7971892x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:00Z", "type": "Journal Article", "created": "2016-08-09", "description": "A balance trial was conducted to titrate the effects of tallow on the energy metabolism of wethers fed barley finishing diets. Six dietary levels of tallow (0, 2, 4, 6, 8, or 10%) in a barley finishing diet were fed to six crossbred wethers (35+/-1.1 kg) in a randomized complete block design. Diets were 73% barley, 10% tallow and(or) bentonite, 10% alfalfa pellets, and 7% supplement. There was no effect of tallow level on OM intake (1,103.1+/-51 g/d), OM digestibility (84+/-0.9%), GE digestibility (83+/-1.1%), or cell solubles digestibility (84.2+/-1.2%). The level of tallow quadratically decreased ADF digestibility (P < 0.05), methane emissions, and methane energy as a percentage of GE P < 0.01). There were linear increases in dietary GE (megacalories per kilogram of OM [P < 0.01]), dietary DE (megacalories per kilogram of OM [P < 0.05]), and dietary ME (megacalories per kilogram of OM [P < 0.01]), as dietary tallow increased. Numbers of ruminal protozoa (Entodinium spp. and Polyplastron sp.) decreased linearly (P < 0.05) with increased level of tallow. The energy value of tallow (calculated by difference) was low. The total-tract fatty acid digestibility of tallow was calculated by linear regression, without intercept, after accounting for the fatty acids digested from the base diet (0% tallow fed to a wether in a period). Fatty acids of the same carbon length were pooled for the regression analysis. All linear regressions were significant (P < 0.10) indicating no effect of tallow level on fatty acid digestibility. Lauric acid had low digestibility. The high digestibility of all C16 (89%) and C18 (104%) fatty acids suggests an effect of tallow on endogenous and microbial fatty acid excretion. Fatty acid digestibility was probably a minor contributor to the low energy content of tallow, calculated by difference, in these diets.", "keywords": ["Fats", "Male", "2. Zero hunger", "Sheep", "Fermentation", "Microscopy", " Electron", " Scanning", "0402 animal and dairy science", "Animals", "Hordeum", "04 agricultural and veterinary sciences", "Energy Metabolism", "Animal Feed"], "contacts": [{"organization": "H H Westberg, Mark L. Nelson, Steven M. Parish,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.2527/2001.7971892x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Animal%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2527/2001.7971892x", "name": "item", "description": "10.2527/2001.7971892x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2527/2001.7971892x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2001-01-01T00:00:00Z"}}, {"id": "10.2527/2004.8261839x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:00Z", "type": "Journal Article", "created": "2016-08-09", "description": "The effects of alpha-cyclodextrin-horseradish oil complex (CD-HR) on methane production and ruminal fermentation were studied in vitro and in steers. In the in vitro study, diluted ruminal fluid (30 mL) was incubated anaerobically at 38 degrees C for 6 h with or without CD-HR, using cornstarch as substrate. The CD-HR was added at various concentrations (0, 0.17, 0.85 and 1.7 g/L). Treatment affected neither the pH of the medium nor the number of protozoa. Total VFA increased in a linear manner (P = 0.02), and NH3-N decreased quadratically (P = 0.04) as the concentration of CD-HR increased from 0.17 g/L to 1.7 g/L. Molar proportions of acetate decreased in a linear manner (P = 0.03), and propionate increased linearly (P = 0.008) with increasing concentrations of CD-HR. Production of methane was inhibited up to 90%, whereas accumulation of dihydrogen was increased 36-fold by 1.7 g/L of CD-HR supplementation relative to controls. The effect of CD-HR on methane production, ruminal fermentation and microbes, and digestibility was further investigated in vivo using four Holstein steers in a crossover design. The CD-HR supplement was mixed into the concentrate portion of a (1.5:1) Sudangrass hay plus concentrate mixture that was fed twice daily to the steers. Ruminal samples were collected 0, 2, and 5 h after the morning feeding. No effects of CD-HR supplementation on ruminal pH (P = 0.63) or protozoal numbers (P = 0.44) were observed. Molar proportion of acetate was decreased (P = 0.04) and propionate was increased (P = 0.005) by CD-HR treatment. Molar proportion of butyrate was increased (P = 0.05) in CD-HR-supplemented steers. Ruminal NH3-N was decreased (P = 0.05) by treatment. Blood plasma glucose concentration was increased (P = 0.02) and urea-N was decreased (P = 0.04) with CD-HR supplementation. Daily DMI was decreased (P = 0.04), and apparent digestibility of DM (P = 0.13), NDF (P = 0.14), and CP tended (P = 0.14) to be increased by treatment. Methane production was decreased (P = 0.03) by 19%, and the number of methanogens was also decreased (P = 0.03). Although N retention (P = 0.11), total viable bacteria (P = 0.15), and sulfate-reducing bacteria (P = 0.17) were not significantly altered by treatment, tendencies for increases were noted with CD-HR supplementation. The number of cellulolytic (P = 0.38) and acetogenic bacteria (P = 0.32) remained unchanged by treatment. These results indicate that CD-HR supplementation can be used to decrease methane production in steers.", "keywords": ["Male", "Cyclodextrins", "Wasabia", "Cross-Over Studies", "Rumen", "Dose-Response Relationship", " Drug", "0402 animal and dairy science", "Eukaryota", "04 agricultural and veterinary sciences", "Hydrogen-Ion Concentration", "In Vitro Techniques", "Fatty Acids", " Volatile", "6. Clean water", "Bacteria", " Anaerobic", "Random Allocation", "Fermentation", "Animals", "Plant Oils", "Cattle", "Digestion", "Energy Intake", "Methane"], "contacts": [{"organization": "Z. A. Lila, N. Ajisaka, K. Hara, Koji Hara, Nazimuddin Mohammed, S. Kanda, K. Mikuni, H. Itabashi,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.2527/2004.8261839x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Animal%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2527/2004.8261839x", "name": "item", "description": "10.2527/2004.8261839x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2527/2004.8261839x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-06-01T00:00:00Z"}}, {"id": "10.2527/jas.2006-686", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:00Z", "type": "Journal Article", "created": "2007-07-14", "title": "Use Of Condensed Tannin Extract From Quebracho Trees To Reduce Methane Emissions From Cattle", "description": "Our objective was to determine if condensed tannin extract from quebracho trees (Schinopsis quebracho-colorado; red quebracho) could be used to reduce enteric methane emissions from cattle. The experiment was designed as a repeated 3 x 3 Latin square (4 squares) with 3 treatments (0, 1, and 2% of dietary DM as quebracho tannin extract) and 3 28-d periods. Six spayed Angus heifers (238 +/- 13.3 kg of initial BW) and 6 Angus steers (207 +/- 8.2 kg of initial BW) were each assigned to 2 squares. The measured condensed tannin content of the extract was 91%, and the basal diet contained 70% forage (DM basis). Feeding quebracho tannin extract had no effect on BW, ADG, or nutrient intakes. Furthermore, it had no effect on DM, energy, or fiber (ADF and NDF) digestibility, but apparent digestibility of CP decreased linearly (P < 0.001) by 5 and 15% with 1 and 2% quebracho tannin extract, respectively. There were no effects of quebracho tannin extract on methane emissions (g/d, g/kg of DM, % of GE intake, or % of DE intake). Feeding up to 2% of the dietary DM as quebracho tannin extract failed to reduce enteric methane emissions from growing cattle, although the protein-binding effect of the quebracho tannin extract was evident.", "keywords": ["Male", "2. Zero hunger", "Rumen", "Plant Extracts", "Anacardiaceae", "Body Weight", "0402 animal and dairy science", "04 agricultural and veterinary sciences", "Animal Feed", "Diet", "0403 veterinary science", "Eating", "13. Climate action", "Dietary Supplements", "Fermentation", "Animals", "Cattle", "Digestion", "Female", "Proanthocyanidins", "Methane"]}, "links": [{"href": "https://doi.org/10.2527/jas.2006-686"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Animal%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2527/jas.2006-686", "name": "item", "description": "10.2527/jas.2006-686", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2527/jas.2006-686"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-08-01T00:00:00Z"}}, {"id": "10.2527/jas.2008-1026", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:00Z", "type": "Journal Article", "created": "2008-11-22", "title": "Effect Of Dl-Malic Acid Supplementation On Feed Intake, Methane Emission, And Rumen Fermentation In Beef Cattle", "description": "The objective of this study was to determine the effect of dietary concentration of dl-malic acid (MA) on DMI, CH(4) emission, and rumen fermentation in beef cattle. Two Latin square experiments were conducted. In Exp. 1, six beef heifers (19 +/- 1 mo old) were assigned in a duplicated Latin square to 1 of 3 dietary concentrations of MA on a DMI basis (0%, MA-0; 3.75%, MA-3.75; or 7.5%, MA-7.5) over 3 periods. In Exp. 2, four rumen-fistulated steers (48 +/- 1 mo old) were assigned to 1 of 4 dietary concentrations of MA (0%, MA-0; 2.5%, MA-2.5; 5.0%, MA-5.0; or 7.5%, MA-7.5) on a DMI basis, over 4 periods. Both experimental diets consisted of grass silage and pelleted concentrate (containing MA). Silage was fed ad libitum once daily (a.m.), whereas concentrate was fed twice daily (a.m. and p.m.) with the aim of achieving a total DMI of 40:60 silage:concentrate. In both Exp. 1 and 2, experimental periods consisted of 28 d, incorporating a 13-d acclimatization, a 5-d measurement period, and a 10-d washout period. In Exp. 1, enteric CH(4), feed apparent digestibility, and feed intake were measured over the 5-d measurement period. In Exp. 2, rumen fluid was collected on d 16 to 18, immediately before (a.m.) feeding and 2, 4, 6, and 8 h thereafter. Rumen pH was determined and samples were taken for protozoa count, VFA, and ammonia analysis. Enteric CH(4) emissions were estimated by using the sulfur hexafluoride tracer technique and feed apparent digestibility was estimated by using chromic oxide as an external marker for fecal output. In Exp. 1, increasing dietary MA led to a linear decrease in total DMI (P < 0.001) and total daily CH(4) emissions (P < 0.001). Compared with the control diet, the greatest concentration of MA decreased total daily CH(4) emissions by 16%, which corresponded to a 9% reduction per unit of DMI. Similarly, in Exp. 2, inclusion of MA reduced DMI in a linear (P = 0.002) and quadratic (P < 0.001) fashion. Increasing dietary MA led to a linear decrease in molar proportion of acetic (P = 0.004) and butyric acids (P < 0.001) and an increase in propionic acid (P < 0.001). Ruminal pH tended to increase (P = 0.10) with increasing dietary MA. Dietary inclusion of MA led to a linear (P = 0.01) decrease in protozoa numbers. Increasing supplementation with MA decreased CH(4) emissions, but DMI was also decreased, which could have potentially negative effects on animal performance.", "keywords": ["Male", "2. Zero hunger", "Rumen", "Time Factors", "Malates", "0402 animal and dairy science", "Eukaryota", "04 agricultural and veterinary sciences", "Eating", "Random Allocation", "Dietary Supplements", "Fermentation", "Animals", "Cattle", "Digestion", "Female", "Methane"]}, "links": [{"href": "https://doi.org/10.2527/jas.2008-1026"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Animal%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2527/jas.2008-1026", "name": "item", "description": "10.2527/jas.2008-1026", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2527/jas.2008-1026"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-03-01T00:00:00Z"}}, {"id": "10.3168/jds.2009-2379", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:05Z", "type": "Journal Article", "created": "2010-03-19", "title": "Effect Of Saccharomyces Cerevisiae Fermentation Product On Ruminal Fermentation And Nutrient Utilization In Dairy Cows", "description": "The goal of this experiment was to investigate the effect of yeast culture (Saccharomyces cerevisiae) on rumen fermentation, nutrient utilization, and ammonia and methane emission from manure in dairy cows. Eight ruminally cannulated Holstein cows were allocated to 2 dietary treatments in a crossover design. Treatments were control (no yeast culture) and XP (yeast culture, fed at 56 g/head per day; XP, Diamond V Mills Inc., Cedar Rapids, IA). Dry matter intake, milk yield, milk composition, and body weight were similar between treatments. Milk urea nitrogen concentration was also not affected by treatment. Rumen pH was similar between the control and XP treatments, but rumen ammonia concentration tended to be lower with XP than with the control. Treatment had no effect on concentrations of total or individual volatile fatty acids, protozoal counts, polysaccharide-degrading activities (except amylase activity that tended to be increased by XP), or methane production in the rumen. Urinary N losses did not differ significantly between treatments, but allantoin and total purine derivative excretions and the estimated microbial N outflow from the rumen tended to be increased by XP compared with the control treatment. Total-tract apparent digestibility of dietary nutrients was not affected by XP. Milk fatty acid composition was also not altered by XP supplementation. Cumulative (253 h) ammonia and methane emissions from manure, measured in a steady-state gas emission system, were slightly decreased by XP. Overall, the yeast culture tested had little effect on ruminal fermentation, digestibility, or N losses, but tended to reduce rumen ammonia concentration and increase microbial protein synthesis in the rumen, and decreased ammonia and methane emissions from manure.", "keywords": ["2. Zero hunger", "Cross-Over Studies", "Rumen", "Nitrogen", "Fatty Acids", "0402 animal and dairy science", "Saccharomyces cerevisiae", "04 agricultural and veterinary sciences", "Hydrogen-Ion Concentration", "Diet", "0403 veterinary science", "Dairying", "Milk", "Ammonia", "Purines", "13. Climate action", "Fermentation", "Animals", "Animal Nutritional Physiological Phenomena", "Cattle", "Female", "Allantoin"]}, "links": [{"href": "https://doi.org/10.3168/jds.2009-2379"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Dairy%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3168/jds.2009-2379", "name": "item", "description": "10.3168/jds.2009-2379", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3168/jds.2009-2379"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-02-01T00:00:00Z"}}, {"id": "10.3168/jds.2010-3281", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:05Z", "type": "Journal Article", "created": "2010-11-21", "title": "Nitrate And Sulfate: Effective Alternative Hydrogen Sinks For Mitigation Of Ruminal Methane Production In Sheep", "description": "Twenty male crossbred Texel lambs were used in a 2 \u00d7 2 factorial design experiment to assess the effect of dietary addition of nitrate (2.6% of dry matter) and sulfate (2.6% of dry matter) on enteric methane emissions, rumen volatile fatty acid concentrations, rumen microbial composition, and the occurrence of methemoglobinemia. Lambs were gradually introduced to nitrate and sulfate in a corn silage-based diet over a period of 4 wk, and methane production was subsequently determined in respiration chambers. Diets were given at 95% of the lowest ad libitum intake observed within one block in the week before methane yield was measured to ensure equal feed intake of animals between treatments. All diets were formulated to be isonitrogenous. Methane production decreased with both supplements (nitrate: -32%, sulfate: -16%, and nitrate+sulfate: -47% relative to control). The decrease in methane production due to nitrate feeding was most pronounced in the period immediately after feeding, whereas the decrease in methane yield due to sulfate feeding was observed during the entire day. Methane-suppressing effects of nitrate and sulfate were independent and additive. The highest methemoglobin value observed in the blood of the nitrate-fed animals was 7% of hemoglobin. When nitrate was fed in combination with sulfate, methemoglobin remained below the detection limit of 2% of hemoglobin. Dietary nitrate decreased heat production (-7%), whereas supplementation with sulfate increased heat production (+3%). Feeding nitrate or sulfate had no effects on volatile fatty acid concentrations in rumen fluid samples taken 24h after feeding, except for the molar proportion of branched-chain volatile fatty acids, which was higher when sulfate was fed and lower when nitrate was fed, but not different when both products were included in the diet. The total number of rumen bacteria increased as a result of sulfate inclusion in the diet. The number of methanogens was reduced when nitrate was fed. Enhanced levels of sulfate in the diet increased the number of sulfate-reducing bacteria. The number of protozoa was not affected by nitrate or sulfate addition. Supplementation of a diet with nitrate and sulfate is an effective means for mitigating enteric methane emissions from sheep.", "keywords": ["Male", "Rumen", "reduction", "in-vitro", "nitrogen", "Random Allocation", "fumaric-acid", "Animals", "Intestinal Mucosa", "real-time pcr", "2. Zero hunger", "rumen", "Nitrates", "Sheep", "Sulfates", "emissions", "0402 animal and dairy science", "methanogenesis", "04 agricultural and veterinary sciences", "Hydrogen-Ion Concentration", "Fatty Acids", " Volatile", "Diet", "Agricultural Land Management", "cattle", "Dietary Supplements", "Fermentation", "Animal Nutritional Physiological Phenomena", "feed-intake", "Methemoglobinemia", "Methane"]}, "links": [{"href": "https://doi.org/10.3168/jds.2010-3281"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Dairy%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3168/jds.2010-3281", "name": "item", "description": "10.3168/jds.2010-3281", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3168/jds.2010-3281"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-12-01T00:00:00Z"}}, {"id": "10.3390/environsciproc2022021014", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:21:19Z", "type": "Journal Article", "created": "2022-10-20", "title": "Significance of Hydromorphological and Sediment Analysis in River Basin Water Quality Management", "description": "The hydromorphology and sediment management, as part of the integrated water management and achieving environmental objectives of the river basin in accordance with the WFD, are presented in the case study of the transboundary rural River Basin Sutla. Sutla is the border river between the Republic of Slovenia and the Republic of Croatia, with a catchment area of 590.6 km2. The proposed sediment management methodology is based on the surface water bodies\u2019 assessment of water quality status, from the surveillance monitoring, and the impact assessment of the point and diffuse pollution sources in the river basin by the mathematical model SWAT.", "keywords": ["EU WFD environmental objectives ; water status ; water quality management ; hydromorphology ; sediment", "0106 biological sciences", "upravljanje z vodami", "15. Life on land", "01 natural sciences", "6. Clean water", "hidromorfologija", "hydromorphology", "Environmental sciences", "kakovosti voda", "EU WFD environmental objectives", "info:eu-repo/classification/udc/556", "sediment", "water status", "13. Climate action", "stanje voda", "hidrologija", "sedimenti", "water quality management", "GE1-350", "14. Life underwater", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://www.mdpi.com/2673-4931/21/1/14/pdf"}, {"href": "https://doi.org/10.3390/environsciproc2022021014"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/EWaS5%20International%20Conference%3A%20%26amp%3Bldquo%3BWater%20Security%20and%20Safety%20Management%3A%20Emerging%20Threats%20or%20New%20Challenges%3F%20Moving%20from%20Therapy%20and%20Restoration%20to%20Prognosis%20and%20Prevention%26amp%3Brdquo%3B", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/environsciproc2022021014", "name": "item", "description": "10.3390/environsciproc2022021014", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/environsciproc2022021014"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-10-19T00:00:00Z"}}, {"id": "10.3390/fermentation6040123", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:20Z", "type": "Journal Article", "created": "2020-12-14", "title": "Brewers spent yeast (BSY), an underutilised brewing by-product.", "description": "<p>The repurposing of by-products and the reduction of waste from food processing streams is an ever-increasing area of interest. Brewer\uffe2\uff80\uff99s spent yeast (BSY) is a prevalent by-product of the brewing industry. The spent yeast cells are removed at the end of the bulk fermentation. A small amount of it is used to start the next batch of fermentation; however, the majority of the spent yeast is discarded. This discarded yeast is high in nutrients, in particular proteins, vitamins and minerals, as well as containing functional and biologically active compounds such as polyphenols, antioxidants, \uffce\uffb2-glucans and mannoproteins. At present, BSY is mainly used in animal feed as a cheap and readily available source of protein. This review explores alternative, value-added applications for brewer\uffe2\uff80\uff99s spent yeast including nutritional ingredients, functional food additives as well as non-food applications. A major challenge in the utilization of BSY in food for human consumption is the high level of RNA. An excess of RNA in the diet can lead to an increase in uric acid in the bloodstream, potentially causing painful health conditions like gout. This issue can be overcome by RNA degradation and removal via additional treatment, namely heat treatment and enzymatic treatment. There is potential for the use of BSY ingredients in various food applications, including meat substitutes, bakery products and savory snacks.</p>", "keywords": ["2. Zero hunger", "TP500-660", "Brewer\u2019s yeast", "Fermentation industries. Beverages. Alcohol", "Saccharomyces cerevisiae", "04 agricultural and veterinary sciences", "brewer\u2019s yeast", "7. Clean energy", "yeast \u03b2-glucans", "12. Responsible consumption", "0404 agricultural biotechnology", "Fermentation", "Food applications", "saccharomyces cerevisiae", "Yeast \u03b2-glucans", "food applications", "fermentation"]}, "links": [{"href": "https://www.mdpi.com/2311-5637/6/4/123/pdf"}, {"href": "https://doi.org/10.3390/fermentation6040123"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Fermentation", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/fermentation6040123", "name": "item", "description": "10.3390/fermentation6040123", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/fermentation6040123"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-12-11T00:00:00Z"}}, {"id": "10.3390/foods10071639", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:20Z", "type": "Journal Article", "created": "2021-07-15", "title": "Fermentation as a tool to revitalise brewer's spent grain and elevate techno-functional properties and nutritional value in high fibre bread", "description": "<p>Recycling of by-products from the food industry has become a central part of research to help create a more sustainable future. Brewers\uffe2\uff80\uff99 spent grain is one of the main side-streams of the brewing industry, rich in protein and fibre. Its inclusion in bread, however, has been challenging and requires additional processing. Fermentation represents a promising tool to elevate ingredient functionality and improve bread quality. Wheat bread was fortified with spray-dried brewers\uffe2\uff80\uff99 spent grain (BSG) and fermented brewers\uffe2\uff80\uff99 spent grain (FBSG) at two addition levels to achieve \uffe2\uff80\uff9csource of fibre\uffe2\uff80\uff9d and \uffe2\uff80\uff9chigh in fibre\uffe2\uff80\uff9d claims according to EU regulations. The impact of BSG and FBSG on bread dough, final bread quality and nutritional value was investigated and compared to baker\uffe2\uff80\uff99s flour (BF) and wholemeal flour (WMF) breads. The inclusion of BSG and FBSG resulted in a stronger and faster gluten development; reduced starch pasting capacity; and increased dough resistance/stiffness. However, fermentation improved bread characteristics resulting in increased specific volume, reduced crumb hardness and restricted microbial growth rate over time. Additionally, the inclusion of FBSG slowed the release in reducing sugars over time during in vitro starch digestion. Thus, fermentation of BSG can ameliorate bread techno-functional properties and improve nutritional quality of breads.</p>", "keywords": ["2. Zero hunger", "Brewers' spent grain", "By-product utilisation", "wheat bread", "Chemical technology", "Wheat bread", "TP1-1185", "04 agricultural and veterinary sciences", "7. Clean energy", "Article", "12. Responsible consumption", "Fibre", "fibre; fermentation; wheat bread; by-product utilisation; brewers\u2019 spent grain", "brewers\u2019 spent grain", "0404 agricultural biotechnology", "by-product utilisation", "13. Climate action", "fibre", "Fermentation", "fermentation"]}, "links": [{"href": "http://www.mdpi.com/2304-8158/10/7/1639/pdf"}, {"href": "https://iris.uniroma1.it/bitstream/11573/1661000/1/Neylon_Fermentation_2021.pdf"}, {"href": "https://www.mdpi.com/2304-8158/10/7/1639/pdf"}, {"href": "https://doi.org/10.3390/foods10071639"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Foods", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/foods10071639", "name": "item", "description": "10.3390/foods10071639", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/foods10071639"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-07-15T00:00:00Z"}}, {"id": "10.3390/foods12213922", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:21:21Z", "type": "Journal Article", "created": "2023-10-26", "title": "Effect of Lactic Acid Bacteria on the Level of Antinutrients in Pulses: A Case Study of a Fermented Faba Bean\u2013Oat Product", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>The importance of cereals and pulses in the diet is widely recognized, and consumers are seeking for ways to balance their diet with plant-based options. However, the presence of antinutritional factors reduces their nutritional value by decreasing the bioavailability of proteins and minerals. This study\u2019s aim was to select microbes and fermentation conditions to affect the nutritional value, taste, and safety of products. Single lactic acid bacteria (LAB) strains that reduce the levels of antinutrients in faba bean and pea were utilized in the selection of microbes for two starter mixtures. They were studied in fermentations of a faba bean\u2013oat mixture at two temperatures for 24, 48, and 72 h. The levels of antinutrients, including galacto-oligosaccharides and pyrimidine glycosides (vicine and convicine), were determined. Furthermore, a sensory evaluation of the fermented product was conducted. Fermentations with selected single strains and microbial mixtures showed a significant reduction in the content of antinutrients, and vicine and convicine decreased by up to 99.7% and 96.1%, respectively. Similarly, the oligosaccharides were almost completely degraded. Selected LAB mixtures were also shown to affect the product\u2019s sensory characteristics. Microbial consortia were shown to perform effectively in the fermentation of protein-rich materials, resulting in products with improved nutritional value and organoleptic properties.</p></article>", "keywords": ["2. Zero hunger", "Chemical technology", "convicine", "organoleptic properties", "TP1-1185", "630", "faba bean", "Article", "lactic acid bacteria", "vicine", "antinutrient", "galacto-oligosaccharides", "antinutrients", "fermentation", "ta119", "pulse"]}, "links": [{"href": "https://doi.org/10.3390/foods12213922"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Foods", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/foods12213922", "name": "item", "description": "10.3390/foods12213922", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/foods12213922"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-10-26T00:00:00Z"}}, {"id": "10.3390/microorganisms7060164", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-04T16:21:25Z", "type": "Journal Article", "created": "2019-06-07", "title": "Modulating Fermentative, Varietal and Aging Aromas of Wine Using non-Saccharomyces Yeasts in a Sequential Inoculation Approach", "description": "<p>The goal of this study is to assess to what extent non-Saccharomyces yeasts can introduce aromatic changes of industrial interest in fermentative, varietal and aged aromas of wine. Aroma precursors from Riesling and Garnacha grapes were extracted and used in two independent sequential experiments. Synthetic musts were inoculated, either with Saccharomyces cerevisiae (Sc) or with Pichia kluyveri (Pk), Torulaspora delbrueckii (Td) or Lachancea thermotolerans (Lt), followed by Sc. The fermented samples were subjected to anoxic aging at 50 \uffc2\uffb0C for 0, 1, 2 or 5 weeks before an aroma analysis. The fermentative aroma profiles were consistently changed by non-Saccharomyces: all strains induced smaller levels of isoamyl alcohol; Pk produced huge levels of aromatic acetates and can induce high levels of fatty acids (FA) and their ethyl esters (EE); Td produced large levels of branched acids and of their EE after aging, and induced smaller levels of FA and their EE; Lt produced reduced levels of FA and their EE. The varietal aroma was also deeply affected: TDN (1,1,6-trimethyl-1,2- dihydronaphthalene) levels in aged wines were reduced by Pk and enhanced by Lt in Garnacha; the levels of vinylphenols can be much reduced, particularly by Lt and Pk. TD and Lt can increase linalool and geraniol in young, but not in aged wines.</p>", "keywords": ["0301 basic medicine", "0303 health sciences", "QH301-705.5", "aging", "glycosides", "fruitiness", "floral notes", "phenolic notes", "Article", "3. Good health", "aroma modulation", "03 medical and health sciences", "kerosene", "aroma precursors", "Biology (General)", "fermentation"]}, "links": [{"href": "http://www.mdpi.com/2076-2607/7/6/164/pdf"}, {"href": "https://www.mdpi.com/2076-2607/7/6/164/pdf"}, {"href": "https://doi.org/10.3390/microorganisms7060164"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Microorganisms", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/microorganisms7060164", "name": "item", "description": "10.3390/microorganisms7060164", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/microorganisms7060164"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-06-06T00:00:00Z"}}, {"id": "10.5281/zenodo.13744547", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:22:48Z", "type": "Software", "title": "Pediatric LGE SAX CMR nnU-Net Segmentation Model", "description": "Overview  This repository contains instructions on downloading and installing a pretrained nnU-Net model [1] for the segmentation of the left myocardium and blood-pool in short-axis Late Gadolinium Enhancement (LGE) Cardiac Magnetic Resonance Images (SAX LGE MRI). The training data consists of 268 phase-sensitive inversion recovery (PSIR) images collected in the MYKKE Registry of children with suspected myocarditis [2], which have been annotated by medical staff at the Charit\u00e9 Berlin as part of the DHZK Shared Expertise Project 81X2100274, as well as 100 training images from the EMIDEC dataset [3], with scar and no-reflow areas counted towards the total myocardial segment.\u00a0  The multi-site, multi-age pediatric training cohort includes images from patients of various ages, from 1.5T and 3.0T scanners, with various voxel-sizes and fields-of-view. LGE is present in a variety of patterns and extents, with some MRI presenting as normal.  The model is intended to be used in the nnUNet eco-system.  Training Data Properties     \u00a0 MYKKE EMIDEC   n 268 100   Pathology myocarditis myocardial infarction (67), healthy (33)   Age, years 13.5\u00b15.0 61.0\u00b112.5   Male, % 197 (73.6) 64 (64.0)   Scanners Siemens, Philips, GE Siemens   Numer of Slices 3-38 5-10   Inplane Voxel Size, mm 1.40\u00b10.33 1.25 - 2.0   Slice Thickness, mm 8.29\u00b11.16 8.0   Slice Distance, mm 9.02\u00b12.06 10.0   Magnetic Field Strength, T 1.5, 3.0 1.5, 3.0   Echo Time, ms 2.6\u00b10.98 1.42   Inversion Time, ms 247.76\u00b1108.5 400   Repetition Time, ms 517.6\u00b1330.6 3.5   Flip Angle, \u00b0 26.82\u00b110.27 20     \u00a0  The model available here is trained on the entire MYKKE and EMIDEC Datasets. For segmentation performance evaluation, we conducted a 5-fold cross-validation, leaving a cross-validation test set from the MYKKE dataset out of the training dataset in each fold.  Performance on MYKKE 5-fold Cross Validation Sets     \u00a0 Fold 1 Fold 2 Fold 3 Fold 4 Fold 5 Average   Number of Cases 54 54 54 53 53 268   Males, (%) 37 (68.5)\u00a0 41 (75.9) 42 (77.8)\u00a0 37 (69.8)\u00a0 40 (75.5)\u00a0 197 (73.59)   Age, years 14.00\u00b14.47\u00a0 13.37\u00b14.94\u00a0 13.70\u00b15.20\u00a0 13.15\u00b15.37\u00a0 13.49\u00b15.19\u00a0 13.55\u00b15.01   Dice Myocardium 0.818\u00b10.124\u00a0 0.806\u00b10.136\u00a0 0.792\u00b10.182\u00a0 0.806\u00b10.117\u00a0 0.830\u00b10.090\u00a0 0.810\u00b10.133   Dice LV Blood Pool 0.945\u00b10.062\u00a0 0.941\u00b10.056\u00a0 0.903\u00b10.190\u00a0 0.938\u00b10.058\u00a0 0.944\u00b10.043\u00a0 0.934\u00b10.099     Installation  To use the model, it is necessary to install nnUNet version 2 and set the relevant paths. The steps are outlined below:  nnUNet v2 Installation  Follow the nnUNet v2 installation instructions first. Note in particular the pytorch requirements! An installation from pip (rather than cloning the repository) is sufficient to use the model for inference on your data.  Usage  1. Download the model  Create a directory for the model. If you have worked with nnUNet v2 before, you can use your nnUNet_results directory, instead.  Download the model zip file.  Unzip the file to the directory you created, or your nnUNet_results directory. Set the environment path for your nnUNet to this directory:  \u00a0    export nnUNet_results=/path/to/results_directory   As no training is done, only the results path needs to be set as an environment variable for the nnUNet.  2. Set up datasets  To process your own data with the model, it needs to be brought into the nnUNet specific format first. Details can be found in the usage instructions. For inference only, you do not need the dataset.json metadata file, but the data needs to be in nifti format.  For example, the data to be segmented might be stored like this:    lge_sax \u251c\u2500\u2500 image0_0000.nii.gz \u251c\u2500\u2500 image1_0000.nii.gz \u251c\u2500\u2500 image2_0000.nii.gz \u251c\u2500\u2500 image3_0000.nii.gz \u2514\u2500\u2500 image4_0000.nii.gz   Where each nii.gz archive is a CMR LGE SAX volume (one or more slices). Note that the image suffix '0000' is necessary for the model to work.  3. Run inference  To segment the new data, simply use the command line tools provided by nnUNet:    nnUNetv2_predict -i /path/to/lge_sax -o /path/to/outputs -d 503 -c 2d -f all   The -i argument specifies the location of the input data, -o the directory where the segementation masks will be written to. If it doesn't exist, it will be created. -d, -c and -f specify the model to be used (it is stored under Dataset503_emidecTrainMykke/nnUNetTrainer__nnUNetPlans__2d/fold_all).  4. Output  For each input image, the segmentation mask is saved as a nifti file with the same identifier (without the 0000 suffix) in the output folder specified in the command. The mask labels are 1: Myocardium, 2: Blood-pool.  \u00a0  Acknowledgements  We thank the collaborators in the MYKKE consortium for the provision of data and registry infrastructure. In particular, we thank L\u00e9a Ter-Minassian and Theodor Uden for the segmentation of the MYKKE CMR images.\u00a0  This work is supported by the Deutsches Zentrum f\u00fcr Herz-Kreislauf-Forschung (DZHK) \u2013 Shared Expertise Project 81X2100274.", "keywords": ["Cardiovascular diseases", "Segmentation", "nnU-Net", "LGE", "CMR", "MRI"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.13744547"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.13744547", "name": "item", "description": "10.5281/zenodo.13744547", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.13744547"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-09-16T00:00:00Z"}}, {"id": "10.5281/zenodo.10836974", "type": "Feature", "geometry": null, "properties": {"license": "unspecified", "updated": "2026-04-04T16:22:29Z", "type": "Dataset", "title": "Organic Matter, Geochemical, Visible Spectrocolorimetric Properties, Radiocesium Properties, and Grain Size of Potential Source Material, Target Sediment Core Layers and Laboratory Mixtures for Conducting Sediment Fingerprinting Approaches in the Mano Dam Reservoir (Hayama Lake) Catchment, Fukushima Prefecture, Japan", "description": "The current dataset was compiled to study sediment fingerprintings practices, i.e tracer selection and contribution modelling. Organic matter, elemental geochemistry, visible difuse spectrocolorimetric properties, radiocesium properties, and grain size were analysed were analysed in potential source material that may supply sediment to coastal rivers, here the upper part of the Mano river, draining the main Fukushima radioactive pollution plume (Japan). Four potential soil source materials (n = 68) were considered: undecontaminated cropland (n = 24), as non-decontaminated soil before the application of local decontamination policies, remediated cropland (n = 10), as decontaminated soil after the application of local decontamination policies, forest soils (n = 24) and subsurface material originating from channel bank collapse or landslides (n = 10; referred to as subsoil). A sediment core was collected in the Mano Dam lake (Hayama lake) on the 6th June 2021 and was sectionned into 1-cm layers (n = 38). Laboratory mixtures (n = 27) were made to assess different contribution levels from the sources.  The current dataset comprises four .csv files including data and metadata information and their respective descriptions of variables. The data set is composed of soil samples, sediment core layer and laboratory mixtures. Laboratory mixtures were prepared to provide a dataset to calibrate/validate un-mixing models implemented to address this research question and analysed in the same conditions and using the same equipment as the source/target material.  Recommended encoding format: latin1", "keywords": ["Sediment Tracing", "Fukushima Daiichi Nuclear Power Plan", "15. Life on land", "Sediment Source Fingerprinting", "Sediment transport", "7. Clean energy", "6. Clean water", "FDNPP", "Source-to-Sink", "Japan", "13. Climate action", "11. Sustainability", "Soil erosion", "Sediment", "Soil Erosion"], "contacts": [{"organization": "Chalaux-Clergue, Thomas, Evrard, Olivier, Durand, Roxanne, Caumon, Alison, Hayashi, Seiji, Tsuji, Hideki, Huon, Sylvain, Vaury, V\u00e9ronique, Wakiyama, Yoshifumi, Nakao, Atsushi, Laceby, J. Patrick, Onda, Yuichi,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.10836974"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.10836974", "name": "item", "description": "10.5281/zenodo.10836974", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.10836974"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-03-19T00:00:00Z"}}, {"id": "10.5281/zenodo.7056709", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:24:02Z", "type": "Report", "title": "Minutes of training event for project partners on knowledge transfer and dissemination. Deliverable D7.3 of the EU Horizon 2020 project OPTAIN.", "description": "<strong>Deliverable report D7.3 of the EU Horizon 2020 Project OPTAIN (Grant agreement No. 862756).</strong> <em>Meeting minutes with main outcomes from two WP7 workshops. </em> <strong>Summary:</strong> A training event for OPTAIN project partners on knowledge transfer and dissemination was planned to be organized in connection with the 1<sup>st</sup> plenary meeting in order to: present and discuss the Communication and Dissemination Strategy and its implementation, using collected metrics and proposed ideas from WP7; focus on project key messages, target groups and how the whole partnership can support outreach, engagement and sharing information among the key stakeholders/target groups; ensure a well-functioning flow of information between the WP7 and project partners After a consensus between OPTAIN partners, it was decided that instead of one training session, there will be two Communication and Dissemination Workshops. This deliverable summarizes the report from both and provides the reader with essential information about the direction that the communication of the project is currently taking. During the 1<sup>st</sup> workshop, the partners from WP7 introduced the initial version of the Communication and Dissemination Strategy to the OPTAIN project partners. To enable an effective promotion of the OPTAIN project WP7 presented important plans and steps that will ensure an effective communication flow between all project partners and WP7. The Learning Environment was the second key topic of the workshop, mainly the introduction to the idea and launch of the roadmap to develop its strategy. The remainder of the workshop was dedicated to interactive activities to generate additional ideas revolving around the previous topics. At the 2<sup>nd</sup> workshop, the partners were updated with ongoing communication and dissemination activities as well as tracked results of the activities so far. Two other parts of the workshop were focusing on partners\u2019 contributions towards future communication and dissemination efforts, and updates on the progress of the development of the Learning Environment application.", "keywords": ["training", "messages", "9. Industry and infrastructure", "communication", "target groups", "H2020", "OPTAIN", "dissemination", "engagement"], "contacts": [{"organization": "Bokal, Sabina, Semko, Jergus, Amorsi, Natacha,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.7056709"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.7056709", "name": "item", "description": "10.5281/zenodo.7056709", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.7056709"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-06-30T00:00:00Z"}}, {"id": "10.5281/zenodo.7056710", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:24:02Z", "type": "Report", "title": "Minutes of training event for project partners on knowledge transfer and dissemination. Deliverable D7.3 of the EU Horizon 2020 project OPTAIN.", "description": "<strong>Deliverable report D7.3 of the EU Horizon 2020 Project OPTAIN (Grant agreement No. 862756).</strong> <em>Meeting minutes with main outcomes from two WP7 workshops. </em> <strong>Summary:</strong> A training event for OPTAIN project partners on knowledge transfer and dissemination was planned to be organized in connection with the 1<sup>st</sup> plenary meeting in order to: present and discuss the Communication and Dissemination Strategy and its implementation, using collected metrics and proposed ideas from WP7; focus on project key messages, target groups and how the whole partnership can support outreach, engagement and sharing information among the key stakeholders/target groups; ensure a well-functioning flow of information between the WP7 and project partners After a consensus between OPTAIN partners, it was decided that instead of one training session, there will be two Communication and Dissemination Workshops. This deliverable summarizes the report from both and provides the reader with essential information about the direction that the communication of the project is currently taking. During the 1<sup>st</sup> workshop, the partners from WP7 introduced the initial version of the Communication and Dissemination Strategy to the OPTAIN project partners. To enable an effective promotion of the OPTAIN project WP7 presented important plans and steps that will ensure an effective communication flow between all project partners and WP7. The Learning Environment was the second key topic of the workshop, mainly the introduction to the idea and launch of the roadmap to develop its strategy. The remainder of the workshop was dedicated to interactive activities to generate additional ideas revolving around the previous topics. At the 2<sup>nd</sup> workshop, the partners were updated with ongoing communication and dissemination activities as well as tracked results of the activities so far. Two other parts of the workshop were focusing on partners\u2019 contributions towards future communication and dissemination efforts, and updates on the progress of the development of the Learning Environment application.", "keywords": ["training", "messages", "9. Industry and infrastructure", "communication", "target groups", "H2020", "OPTAIN", "dissemination", "engagement"], "contacts": [{"organization": "Bokal, Sabina, Semko, Jergus, Amorsi, Natacha,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.7056710"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.7056710", "name": "item", "description": "10.5281/zenodo.7056710", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.7056710"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-06-30T00:00:00Z"}}, {"id": "10550/85613", "type": "Feature", "geometry": null, "properties": {"license": "unspecified", "updated": "2026-04-04T16:25:18Z", "type": "Report", "title": "La desruralitzaci\u00f3 del m\u00f3n", "description": "En el n\u00famero 59 de la revista L'Espill trobar\u00e0s un n\u00famero especial sobre la revoluci\u00f3 de Maig de 1968, '50 anys despr\u00e9s del 1968', amb contribucions d'Ernest Reig, Josep Vicent Boira, Luis Moreno, Gustau Mu\u00f1oz, Aitana Guia, Anna I. L\u00f3pez, Andreu Domingo, Ricard P\u00e9rez Casado, Simona \u0160krabec, Josep P\u00e9rez, Antoni Segura, Lola Ba\u00f1on, Juan Pecourt, Ana Aguado, Mykola Riabtxuc, Carles Feixa, Teresa F\u00e8rriz, Josep Llu\u00eds G\u00f3mez Mompart, Jos\u00e9 E. Muratti, Xavier Mas, Ignacio Gozalo-Salellas i Francesc Torres. A m\u00e9s, converses amb Maria \u00c1ngeles Dur\u00e1n, Frigga Haug i Mladen Dolar.", "keywords": ["assaig", "UNESCO::CIENCIAS DE LAS ARTES Y LAS LETRAS", "revista", "pensament", "Espill"], "contacts": [{"organization": "P\u00e9rez, Josep", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10550/85613"}, {"rel": "self", "type": "application/geo+json", "title": "10550/85613", "name": "item", "description": "10550/85613", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10550/85613"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-01T00:00:00Z"}}, {"id": "11353/10.2110681", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:25:26Z", "type": "Journal Article", "created": "2024-11-19", "title": "A respiro-fermentative strategy to survive nanoxia in Acidobacterium capsulatum", "description": "Abstract                <p>Microbial soil habitats are characterized by rapid shifts in substrate and nutrient availabilities, as well as chemical and physical parameters. One such parameter that can vary in soil is oxygen; thus, microbial survival is dependent on adaptation to this substrate. To better understand the metabolic abilities and adaptive strategies to oxygen-deprived environments, we combined genomics with transcriptomics of a model organism, Acidobacterium capsulatum, to explore the effect of decreasing, environmentally relevant oxygen concentrations. The decrease from 10 to 0.1\uffc2\uffa0\uffc2\uffb5M oxygen (3.6 to 0.036 pO2% present atmospheric level, respectively) caused the upregulation of the transcription of genes involved in signal transduction mechanisms, energy production and conversion and secondary metabolites biosynthesis, transport, and catabolism based on clusters of orthologous group categories. Contrary to established observations for aerobic metabolism, key genes in oxidative stress response were significantly upregulated at lower oxygen concentrations, presumably due to an NADH/NAD+ redox ratio imbalance as the cells transitioned into nanoxia. Furthermore, A. capsulatum adapted to nanoxia by inducing a respiro-fermentative metabolism and rerouting fluxes of its central carbon and energy pathways to adapt to high NADH/NAD+ redox ratios. Our results reveal physiological features and metabolic capabilities that allowed A. capsulatum to adapt to oxygen-limited conditions, which could expand into other environmentally relevant soil strains.</p", "keywords": ["0301 basic medicine", "106022 Mikrobiologie", "0303 health sciences", "Acidobacteriota", "NADH imbalances", "microaerobic respiration", "Gene Expression Regulation", " Bacterial", "Adaptation", " Physiological", "oxygen limitation", "Acidobacteria", "Oxygen", "Oxidative Stress", "03 medical and health sciences", "106026 \u00d6kosystemforschung", "Fermentation", "106022 Microbiology", "106026 Ecosystem research", "fermentation", "transcriptome", "Oxidation-Reduction", "Soil Microbiology", "Research Article"]}, "links": [{"href": "https://doi.org/11353/10.2110681"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/FEMS%20Microbiology%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11353/10.2110681", "name": "item", "description": "11353/10.2110681", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11353/10.2110681"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-11-18T00:00:00Z"}}, {"id": "20.500.11850/506000", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:25:54Z", "type": "Journal Article", "created": "2021-06-23", "title": "Limitation of Microbial Processes at Saturation-Level Salinities in a Microbial Mat Covering a Coastal Salt Flat", "description": "<p>             Due to their abilities to survive intense radiation and low water availability, hypersaline microbial mats are often suggested to be analogs of potential extraterrestrial life. However, even on Earth, the limitations imposed on microbial processes by saturation-level salinity have rarely been studied             in situ             .           </p", "keywords": ["aerobic respiration", "primary and secondary production", "0301 basic medicine", "Geologic Sediments", "hypersaline microbial mats", "microbial communities", "Sodium Chloride", "extremophiles/extremophily", "03 medical and health sciences", "CYANOBACTERIAL MATS", "REDUCING BACTERIA", "uncultured microbes", "BACTERIUM DESULFOVIBRIO-OXYCLINAE", "Environmental Microbiology", "14. Life underwater", "Photosynthesis", "Phylogeny", "DISSIMILATORY SULFATE REDUCTION", "106022 Mikrobiologie", "Bacteria", "Microbiota", "ANOXYGENIC PHOTOSYNTHESIS", "15. Life on land", "Archaea", "biofilm biology", "6. Clean water", "Oxygen", "sulfide microprofiles", "13. Climate action", "CHLOROFLEXUS-LIKE BACTERIA", "106022 Microbiology", "sulfate reduction rate", "GEN. NOV.", "sulfur cycling", "PHYSIOLOGICAL CHARACTERIZATION", "DUNALIELLA", "microbiology of unexplored habitats", "biofilm biology; element cycles and biogeochemical processes; extremophiles/extremophily; microbial communities; microbiology of unexplored habitats; primary and secondary production; uncultured microbes", "element cycles and biogeochemical processes", "key biogeochemical processes", "OXYGENIC PHOTOSYNTHESIS", "Sulfur"]}, "links": [{"href": "https://journals.asm.org/doi/pdf/10.1128/AEM.00698-21"}, {"href": "https://doi.org/20.500.11850/506000"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20and%20Environmental%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "20.500.11850/506000", "name": "item", "description": "20.500.11850/506000", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/20.500.11850/506000"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-08-11T00:00:00Z"}}, {"id": "20.500.11850/705672", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:25:56Z", "type": "Journal Article", "created": "2024-11-04", "title": "Geochemical Decoupling of Iron and Zinc during Transformation of Zn-Bearing Ferrihydrite in Reducing Sediments", "description": "Open AccessISSN:0013-936X", "keywords": ["Geologic Sediments", "zinc carbonate", "Iron", "Mossbauer spectroscopy", "X-ray absorption spectroscopy", "mineral transformation; Mossbauer spectroscopy; X-ray absorption spectroscopy; environmental speciation; green rust; zinc sulfide; zinc carbonate", "Ferric Compounds", "Zinc", "Spectroscopy", " Mossbauer", "green rust", "X-Ray Absorption Spectroscopy", "zinc sulfide", "Oxidation-Reduction", "mineral transformation", "environmental speciation"]}, "links": [{"href": "https://pubs.acs.org/doi/pdf/10.1021/acs.est.4c09261"}, {"href": "https://doi.org/20.500.11850/705672"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20%26amp%3B%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "20.500.11850/705672", "name": "item", "description": "20.500.11850/705672", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/20.500.11850/705672"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-11-04T00:00:00Z"}}, {"id": "20.500.12556/RUL-142108", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:25:57Z", "type": "Journal Article", "created": "2022-10-20", "title": "Significance of Hydromorphological and Sediment Analysis in River Basin Water Quality Management", "description": "The hydromorphology and sediment management, as part of the integrated water management and achieving environmental objectives of the river basin in accordance with the WFD, are presented in the case study of the transboundary rural River Basin Sutla. Sutla is the border river between the Republic of Slovenia and the Republic of Croatia, with a catchment area of 590.6 km2. The proposed sediment management methodology is based on the surface water bodies\u2019 assessment of water quality status, from the surveillance monitoring, and the impact assessment of the point and diffuse pollution sources in the river basin by the mathematical model SWAT.", "keywords": ["EU WFD environmental objectives ; water status ; water quality management ; hydromorphology ; sediment", "0106 biological sciences", "upravljanje z vodami", "15. Life on land", "01 natural sciences", "6. Clean water", "hidromorfologija", "hydromorphology", "Environmental sciences", "kakovosti voda", "EU WFD environmental objectives", "info:eu-repo/classification/udc/556", "sediment", "water status", "13. Climate action", "stanje voda", "hidrologija", "sedimenti", "water quality management", "GE1-350", "14. Life underwater", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://www.mdpi.com/2673-4931/21/1/14/pdf"}, {"href": "https://doi.org/20.500.12556/RUL-142108"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/EWaS5%20International%20Conference%3A%20%26amp%3Bldquo%3BWater%20Security%20and%20Safety%20Management%3A%20Emerging%20Threats%20or%20New%20Challenges%3F%20Moving%20from%20Therapy%20and%20Restoration%20to%20Prognosis%20and%20Prevention%26amp%3Brdquo%3B", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "20.500.12556/RUL-142108", "name": "item", "description": "20.500.12556/RUL-142108", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/20.500.12556/RUL-142108"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-10-19T00:00:00Z"}}, {"id": "2746124018", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:26:19Z", "type": "Journal Article", "created": "2017-08-22", "title": "A theory of participation: what makes stakeholder and public engagement in environmental management work?", "description": "Abstract<p>This article differentiates between descriptive and explanatory factors to develop a typology and a theory of stakeholder and public engagement. The typology describes different types of public and stakeholder engagement, and the theory comprises four factors that explain much of the variation in outcomes (for the natural environment and/or for participants) between different types of engagement. First, we use a narrative literature search to develop a new typology of stakeholder and public engagement based on agency (who initiates and leads engagement) and mode of engagement (from communication to coproduction). We then propose a theory to explain the variation in outcomes from different types of engagement: (1) a number of socioeconomic, cultural, and institutional contextual factors influence the outcomes of engagement; (2) there are a number of process design factors that can increase the likelihood that engagement leads to desired outcomes, across a wide range of sociocultural, political, economic, and biophysical contexts; (3) the effectiveness of engagement is significantly influenced by power dynamics, the values of participants, and their epistemologies, that is, the way they construct knowledge and which types of knowledge they consider valid; and (4) engagement processes work differently and can lead to different outcomes when they operate over different spatial and temporal scales. We use the theoretical framework to provide practical guidance for those designing engagement processes, arguing that a theoretically informed approach to stakeholder and public engagement has the potential to markedly improve the outcomes of environmental decision\uffe2\uff80\uff90making processes.</p", "keywords": ["Engagement", "/dk/atira/pure/core/keywords/nachhaltigkeitswissenschaft; name=Sustainability Science", "0211 other engineering and technologies", "02 engineering and technology", "16. Peace & justice", "/dk/atira/pure/subjectarea/asjc/1100/1105; name=Ecology", " Evolution", " Behavior and Systematics", "01 natural sciences", "Knowledge exchange", "Impact", "13. Climate action", "/dk/atira/pure/subjectarea/asjc/2300/2303; name=Ecology", "/dk/atira/pure/subjectarea/asjc/2300/2309; name=Nature and Landscape Conservation", "Decision-making", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/rec.12541"}, {"href": "https://doi.org/2746124018"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Restoration%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "2746124018", "name": "item", "description": "2746124018", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/2746124018"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-08-22T00:00:00Z"}}, {"id": "3014579074", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:26:36Z", "type": "Journal Article", "created": "2020-04-05", "title": "Caproate production from xylose by mesophilic mixed culture fermentation", "description": "Caproate production by mixed culture fermentation (MCF) is economically attractive. Xylose is known as the<br> second most abundant sugar in nature, however, producing caproate from xylose is never reported. In this study, caproate production from xylose by mesophilic MCF was firstly investigated. The results showed that as pH decreasing to 5.0, the caproate concentration was 2.06 g/L in a batch reactor and was between 0.45 and 1.07 g/L in a continuously stirred reactor. Microbial analysis illustrated that Caproiciproducens and<br> Clostridium_sensu_stricto_12, as two main identified caproate producers, occupied over 50% and around 10% of mixed culture, respectively. Thus, caproate production from xylose was proposed via the fatty acid biosynthesis pathway, not the well-known reverse \u03b2-oxidation pathway. These unexpected differences from literatures gains more understanding about caproate production from organic substrates via MCF.", "keywords": ["Clostridium", "Glucose", "Xylose", "Fermentation", "0211 other engineering and technologies", "Caproate", "02 engineering and technology", "Mixed culture fermentation", "Caproiciproducens", "The fatty acid biosynthesis pathway", "Caproates", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/3014579074"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bioresource%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "3014579074", "name": "item", "description": "3014579074", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/3014579074"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-07-01T00:00:00Z"}}, {"id": "32278998", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:26:53Z", "type": "Journal Article", "created": "2020-04-05", "title": "Caproate production from xylose by mesophilic mixed culture fermentation", "description": "Caproate production by mixed culture fermentation (MCF) is economically attractive. Xylose is known as the<br> second most abundant sugar in nature, however, producing caproate from xylose is never reported. In this study, caproate production from xylose by mesophilic MCF was firstly investigated. The results showed that as pH decreasing to 5.0, the caproate concentration was 2.06 g/L in a batch reactor and was between 0.45 and 1.07 g/L in a continuously stirred reactor. Microbial analysis illustrated that Caproiciproducens and<br> Clostridium_sensu_stricto_12, as two main identified caproate producers, occupied over 50% and around 10% of mixed culture, respectively. Thus, caproate production from xylose was proposed via the fatty acid biosynthesis pathway, not the well-known reverse \u03b2-oxidation pathway. These unexpected differences from literatures gains more understanding about caproate production from organic substrates via MCF.", "keywords": ["Clostridium", "Glucose", "Xylose", "Fermentation", "0211 other engineering and technologies", "Caproate", "02 engineering and technology", "Mixed culture fermentation", "Caproiciproducens", "The fatty acid biosynthesis pathway", "Caproates", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/32278998"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bioresource%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "32278998", "name": "item", "description": "32278998", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/32278998"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-07-01T00:00:00Z"}}, {"id": "PMC10649981", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:28:56Z", "type": "Journal Article", "created": "2023-10-26", "title": "Effect of Lactic Acid Bacteria on the Level of Antinutrients in Pulses: A Case Study of a Fermented Faba Bean\u2013Oat Product", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>The importance of cereals and pulses in the diet is widely recognized, and consumers are seeking for ways to balance their diet with plant-based options. However, the presence of antinutritional factors reduces their nutritional value by decreasing the bioavailability of proteins and minerals. This study\u2019s aim was to select microbes and fermentation conditions to affect the nutritional value, taste, and safety of products. Single lactic acid bacteria (LAB) strains that reduce the levels of antinutrients in faba bean and pea were utilized in the selection of microbes for two starter mixtures. They were studied in fermentations of a faba bean\u2013oat mixture at two temperatures for 24, 48, and 72 h. The levels of antinutrients, including galacto-oligosaccharides and pyrimidine glycosides (vicine and convicine), were determined. Furthermore, a sensory evaluation of the fermented product was conducted. Fermentations with selected single strains and microbial mixtures showed a significant reduction in the content of antinutrients, and vicine and convicine decreased by up to 99.7% and 96.1%, respectively. Similarly, the oligosaccharides were almost completely degraded. Selected LAB mixtures were also shown to affect the product\u2019s sensory characteristics. Microbial consortia were shown to perform effectively in the fermentation of protein-rich materials, resulting in products with improved nutritional value and organoleptic properties.</p></article>", "keywords": ["2. Zero hunger", "Chemical technology", "convicine", "organoleptic properties", "TP1-1185", "630", "faba bean", "Article", "lactic acid bacteria", "vicine", "antinutrient", "galacto-oligosaccharides", "antinutrients", "fermentation", "ta119", "pulse"]}, "links": [{"href": "https://doi.org/PMC10649981"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Foods", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "PMC10649981", "name": "item", "description": "PMC10649981", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PMC10649981"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-10-26T00:00:00Z"}}, {"id": "PMC11741103", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:28:59Z", "type": "Journal Article", "created": "2024-12-25", "title": "In Situ Vivianite Formation in Intertidal Sediments: Ferrihydrite-Adsorbed P Triggers Vivianite Formation", "description": "Open AccessISSN:0013-936X", "keywords": ["Geologic Sediments", "Spectroscopy", " Mossbauer", "Mo\u0308ssbauer spectroscopy", "Phosphorus", "Adsorption", "Ferrous Compounds", "coastal sediments", "Ferric Compounds", "iron minerals", "Phosphates", "phosphorus cycling"]}, "links": [{"href": "https://pubs.acs.org/doi/pdf/10.1021/acs.est.4c10710"}, {"href": "https://doi.org/PMC11741103"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20%26amp%3B%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "PMC11741103", "name": "item", "description": "PMC11741103", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PMC11741103"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-12-25T00:00:00Z"}}, {"id": "PMC11525289", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-04T16:28:58Z", "type": "Journal Article", "created": "2024-10-15", "title": "All black: a microplastic extraction combined with colour-based analysis allows identification and characterisation of tire wear particles (TWP) in soils", "description": "<title>Abstract</title>         <p>While tire wear particles (TWP) have been estimated to represent more than 90% of the total microplastic (MP) emitted in European countries and may have environmental health effects, only few data about TWP concentrations and characteristics are available today. The lack of data stems from the fact that no standardized, cost efficient or accessible extraction and identification method is available yet. We present a method allowing the extraction of TWP from soil, performing analysis with a conventional optical microscope and a machine learning approach to identify TWP in soil based on their colour. The lowest size of TWP which could be measured reliably with an acceptable recovery using our experimental set-up was 35 \u00b5m. Further improvements would be possible given more advanced technical infrastructure (higher optical magnification and image quality). Our method showed a mean recovery of 85% in the 35-2000 \u00b5m particle size range and no blank contamination. We tested for possible interference from charcoal (as another black soil component with similar properties) in the soils and found a reduction of the interference from charcoal by 92% during extraction. We applied our method to a highway adjacent soil at 1 m, 2 m, 5 m, and 10 m and detected TWP in all samples with a tendency to higher concentrations at 1 m and 2 m from the road compared to 10 m from the road. The observed TWP concentrations were in the same order of magnitude as what was previously reported in literature in highway adjacent soils. These results demonstrate the potential of the method to provide quantitative data on the occurrence and characteristics of TWP in the environment. The method can be easily implemented in many labs, and help to address our knowledge gap regarding TWP concentrations in soils.</p>", "keywords": ["TP1080-1185", "Segmentation", "TD172-193.5", "Tire wear", "Soil pollution", "Machine learning", "Microplastic", "Methodology", "Polymers and polymer manufacture", "Optical microscopy", "Environmental pollution"]}, "links": [{"href": "https://doi.org/PMC11525289"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Microplastics%20and%20Nanoplastics", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "PMC11525289", "name": "item", "description": "PMC11525289", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PMC11525289"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-10-15T00:00:00Z"}}, {"id": "e3c9d650-88fd-11da-a88f-000d939bc5d8", "type": "Feature", "geometry": {"type": "Polygon", "coordinates": [[[-54.6, 2.11], [-54.6, 5.75], [-51.64, 5.75], [-51.64, 2.11], [-54.6, 2.11]]]}, "properties": {"themes": [{"concepts": [{"id": "geoscientificInformation"}], "scheme": "https://standards.iso.org/iso/19139/resources/gmxCodelists.xml#MD_TopicCategoryCode"}], "updated": "2011-12-19T23:36:03", "language": "eng", "title": "Atlas des D\u00e9partements d'Outre- mer: La Guyane (French Guiana)", "description": "Include:\nS\u00e9dimentologie, plaines c\u00f4ti\u00e8res  (Turenne, J.F )(Planche 6)- \nP\u00e9ologie, plaines c\u00f4ti\u00e8res (Turenne, J.F.)  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