{"type": "FeatureCollection", "features": [{"id": "10.1038/s41598-019-55251-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:16:49Z", "type": "Journal Article", "created": "2019-12-16", "title": "Assessing the impact of global climate changes on irrigated wheat yields and water requirements in a semi-arid environment of Morocco", "description": "Abstract<p>The present work aims to quantify the impact of climate change (CC) on the grain yields of irrigated cereals and their water requirements in the Tensift region of Morocco. The Med-CORDEX (MEDiterranean COordinated Regional Climate Downscaling EXperiment) ensemble runs under scenarios RCP4.5 (Representative Concentration Pathway) and RCP8.5 are first evaluated and disaggregated using the quantile-quantile approach. The impact of CC on the duration of the main wheat phenological stages based on the degree-day approach is then analyzed. The results show that the rise in air temperature causes a shortening of the development cycle of up to 50 days. The impacts of rising temperature and changes in precipitation on wheat yields are next evaluated, based on the AquaCrop model, both with and without taking into account the fertilizing effect of CO2. As expected, optimal wheat yields will decrease on the order of 7 to 30% if CO2 concentration rise is not considered. The fertilizing effect of CO2 can counterbalance yield losses, since optimal yields could increase by 7% and 13% respectively at mid-century for the RCP4.5 and RCP8.5 scenarios. Finally, water requirements are expected to decrease by 13 to 42%, mainly in response to the shortening of the cycle. This decrease is associated with a change in temporal patterns, with the requirement peak coming two months earlier than under current conditions.</p>", "keywords": ["Water resources", "Atmospheric sciences", "Agricultural Irrigation", "environment/Bioclimatology", "550", "Representative Concentration Pathways", "Adaptation to Climate Change in Agriculture", "Arid", "Rain", "[SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/Agronomy", "Climate Change and Variability Research", "Plant Science", "Precipitation", "02 engineering and technology", "01 natural sciences", "Agricultural and Biological Sciences", "Downscaling", "Climate change", "Quantile", "Triticum", "Climatology", "2. Zero hunger", "Global and Planetary Change", "Ecology", "Geography", "Temperature", "Life Sciences", "Geology", "Morocco", "Phenology", "[SDV.EE.BIO]Life Sciences [q-bio]/Ecology", "Seeds", "Physical Sciences", "Metallurgy", "Desert Climate", "Impacts of Elevated CO2 and Ozone on Plant Physiology", "Climate Change", "0207 environmental engineering", "Yield (engineering)", "Climate model", "Article", "Environmental science", "FOS: Economics and business", "Meteorology", "FOS: Mathematics", "Econometrics", "[SDU.STU.HY]Sciences of the Universe [physics]/Earth Sciences/Hydrology", "Biology", "Ecology", " Evolution", " Behavior and Systematics", "0105 earth and related environmental sciences", "[SDV.SA.AGRO] Life Sciences [q-bio]/Agricultural sciences/Agronomy", "Water", "FOS: Earth and related environmental sciences", "Carbon Dioxide", "15. Life on land", "Agronomy", "Materials science", "[SDV.EE.BIO] Life Sciences [q-bio]/Ecology", " environment/Bioclimatology", "13. Climate action", "FOS: Biological sciences", "Environmental Science", "[SDU.STU.HY] Sciences of the Universe [physics]/Earth Sciences/Hydrology", "Crop Yield", "Mediterranean climate", "Mathematics", "Climate Modeling"]}, "links": [{"href": "https://www.nature.com/articles/s41598-019-55251-2.pdf"}, {"href": "https://doi.org/10.1038/s41598-019-55251-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Scientific%20Reports", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41598-019-55251-2", "name": "item", "description": "10.1038/s41598-019-55251-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41598-019-55251-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-16T00:00:00Z"}}, {"id": "10.1111/gcb.17305", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:17:35Z", "type": "Journal Article", "created": "2024-05-07", "title": "Meta\u2010analysis reveals that the effects of precipitation change on soil and litter fauna in forests depend on body size", "description": "Abstract<p>Anthropogenic climate change is altering precipitation regimes at a global scale. While precipitation changes have been linked to changes in the abundance and diversity of soil and litter invertebrate fauna in forests, general trends have remained elusive due to mixed results from primary studies. We used a meta\uffe2\uff80\uff90analysis based on 430 comparisons from 38 primary studies to address associated knowledge gaps, (i) quantifying impacts of precipitation change on forest soil and litter fauna abundance and diversity, (ii) exploring reasons for variation in impacts and (iii) examining biases affecting the realism and accuracy of experimental studies. Precipitation reductions led to a decrease of 39% in soil and litter fauna abundance, with a 35% increase in abundance under precipitation increases, while diversity impacts were smaller. A statistical model containing an interaction between body size and the magnitude of precipitation change showed that mesofauna (e.g. mites, collembola) responded most to changes in precipitation. Changes in taxonomic richness were related solely to the magnitude of precipitation change. Our results suggest that body size is related to the ability of a taxon to survive under drought conditions, or to benefit from high precipitation. We also found that most experiments manipulated precipitation in a way that aligns better with predicted extreme climatic events than with predicted average annual changes in precipitation and that the experimental plots used in experiments were likely too small to accurately capture changes for mobile taxa. The relationship between body size and response to precipitation found here has far\uffe2\uff80\uff90reaching implications for our ability to predict future responses of soil biodiversity to climate change and will help to produce more realistic mechanistic soil models which aim to simulate the responses of soils to global change.</p", "keywords": ["2. Zero hunger", "Climate Change", "Rain", "evidence synthesis", "drought", "Biodiversity", "Forests", "15. Life on land", "Invertebrates", "6. Clean water", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "meta-analysis", "[SDE.MCG] Environmental Sciences/Global Changes", "Soil", "[SDV.EE.BIO] Life Sciences [q-bio]/Ecology", " environment/Bioclimatology", "climate change", "13. Climate action", "Animals", "Body Size", "precipitation change", "soil fauna"]}, "links": [{"href": "https://doi.org/10.1111/gcb.17305"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.17305", "name": "item", "description": "10.1111/gcb.17305", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.17305"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-10T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2007.01439.x", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-09-21T16:17:41Z", "type": "Journal Article", "created": "2007-10-18", "title": "Co2balance Of Boreal, Temperate, And Tropical Forests Derived From A Global Database", "description": "Abstract<p>Terrestrial ecosystems sequester 2.1\uffe2\uff80\uff83Pg of atmospheric carbon annually. A large amount of the terrestrial sink is realized by forests. However, considerable uncertainties remain regarding the fate of this carbon over both short and long timescales. Relevant data to address these uncertainties are being collected at many sites around the world, but syntheses of these data are still sparse. To facilitate future synthesis activities, we have assembled a comprehensive global database for forest ecosystems, which includes carbon budget variables (fluxes and stocks), ecosystem traits (e.g. leaf area index, age), as well as ancillary site information such as management regime, climate, and soil characteristics. This publicly available database can be used to quantify global, regional or biome\uffe2\uff80\uff90specific carbon budgets; to re\uffe2\uff80\uff90examine established relationships; to test emerging hypotheses about ecosystem functioning [e.g. a constant net ecosystem production (NEP) to gross primary production (GPP) ratio]; and as benchmarks for model evaluations. In this paper, we present the first analysis of this database. We discuss the climatic influences on GPP, net primary production (NPP) and NEP and present the CO2 balances for boreal, temperate, and tropical forest biomes based on micrometeorological, ecophysiological, and biometric flux and inventory estimates. Globally, GPP of forests benefited from higher temperatures and precipitation whereas NPP saturated above either a threshold of 1500\uffe2\uff80\uff83mm precipitation or a mean annual temperature of 10 \uffc2\uffb0C. The global pattern in NEP was insensitive to climate and is hypothesized to be mainly determined by nonclimatic conditions such as successional stage, management, site history, and site disturbance. In all biomes, closing the CO2 balance required the introduction of substantial biome\uffe2\uff80\uff90specific closure terms. Nonclosure was taken as an indication that respiratory processes, advection, and non\uffe2\uff80\uff90CO2 carbon fluxes are not presently being adequately accounted for.</p>", "keywords": ["0106 biological sciences", "environment/Bioclimatology", "550", "[SDV]Life Sciences [q-bio]", "01 natural sciences", "630", "SDG 17 - Partnerships for the Goals", "carbon cycle", "SDG 13 - Climate Action", "carbon cycle; forest ecosystems; global database; gross primary productivity; net ecosystem productivity; net primary productivity", "net primary productivity", "global database", "0105 earth and related environmental sciences", "Ecology", "net ecosystem productivity", "forest ecosystems", "Biological Sciences", "15. Life on land", "Climate Action", "[SDV] Life Sciences [q-bio]", "[SDV.EE.BIO] Life Sciences [q-bio]/Ecology", " environment/Bioclimatology", "13. Climate action", "[SDV.EE.BIO]Life Sciences [q-bio]/Ecology", "CO2", "gross primary productivity", "Environmental Sciences"]}, "links": [{"href": "https://escholarship.org/content/qt57t1t77c/qt57t1t77c.pdf"}, {"href": "https://doi.org/10.1111/j.1365-2486.2007.01439.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2007.01439.x", "name": "item", "description": "10.1111/j.1365-2486.2007.01439.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2007.01439.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-08-21T00:00:00Z"}}, {"id": "10.3389/fmicb.2016.01247", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:19:15Z", "type": "Journal Article", "created": "2016-08-08", "title": "Soil Fungal:Bacterial Ratios Are Linked to Altered Carbon Cycling", "description": "Despite several lines of observational evidence, there is a lack of consensus on whether higher fungal:bacterial (F:B) ratios directly cause higher soil carbon (C) storage. We employed RNA sequencing, protein profiling and isotope tracer techniques to evaluate whether differing F:B ratios are associated with differences in C storage. A mesocosm (13)C labeled foliar litter decomposition experiment was performed in two soils that were similar in their physico-chemical properties but differed in microbial community structure, specifically their F:B ratio (determined by PLFA analyses, RNA sequencing and protein profiling; all three corroborating each other). Following litter addition, we observed a consistent increase in abundance of fungal phyla; and greater increases in the fungal dominated soil; implicating the role of fungi in litter decomposition. Litter derived (13)C in respired CO2 was consistently lower, and residual (13)C in bulk SOM was higher in high F:B soil demonstrating greater C storage potential in the F:B dominated soil. We conclude that in this soil system, the increased abundance of fungi in both soils and the altered C cycling patterns in the F:B dominated soils highlight the significant role of fungi in litter decomposition and indicate that F:B ratios are linked to higher C storage potential.", "keywords": ["Microbiology (medical)", "Proteomics", "0301 basic medicine", "environment/Bioclimatology", "Supplementary Data", "[SDE.MCG]Environmental Sciences/Global Changes", "stable isotopes", "litter decomposition", "Microbiology", "03 medical and health sciences", "proteomics", "[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/Geochemistry", "[SDV.EE]Life Sciences [q-bio]/Ecology", "[SDU.STU.GC] Sciences of the Universe [physics]/Earth Sciences/Geochemistry", "soil carbon", "European Commission", "bacteria", "Stable isotopes", "2. Zero hunger", "655240", "0303 health sciences", "Bacteria", "Litter decomposition", "Fungi", "RNA sequencing", "QR Microbiology", "15. Life on land", "Soil carbon", "[SDU.ENVI] Sciences of the Universe [physics]/Continental interfaces", " environment", "QR1-502", "6. Clean water", "QR", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "[SDE.MCG] Environmental Sciences/Global Changes", "[SDV.EE] Life Sciences [q-bio]/Ecology", " environment", "[SDV.EE.BIO] Life Sciences [q-bio]/Ecology", " environment/Bioclimatology", "[SDV.EE.BIO]Life Sciences [q-bio]/Ecology", "fungi", "[SDE.BE]Environmental Sciences/Biodiversity and Ecology", "[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces", "environment"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2016.01247"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2016.01247", "name": "item", "description": "10.3389/fmicb.2016.01247", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2016.01247"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-08-09T00:00:00Z"}}, {"id": "1871.1/cb964ecd-1143-41f1-a24e-bba0bccf2ea8", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:22:28Z", "type": "Journal Article", "created": "2024-05-07", "title": "Meta\u2010analysis reveals that the effects of precipitation change on soil and litter fauna in forests depend on body size", "description": "Abstract<p>Anthropogenic climate change is altering precipitation regimes at a global scale. While precipitation changes have been linked to changes in the abundance and diversity of soil and litter invertebrate fauna in forests, general trends have remained elusive due to mixed results from primary studies. We used a meta\uffe2\uff80\uff90analysis based on 430 comparisons from 38 primary studies to address associated knowledge gaps, (i) quantifying impacts of precipitation change on forest soil and litter fauna abundance and diversity, (ii) exploring reasons for variation in impacts and (iii) examining biases affecting the realism and accuracy of experimental studies. Precipitation reductions led to a decrease of 39% in soil and litter fauna abundance, with a 35% increase in abundance under precipitation increases, while diversity impacts were smaller. A statistical model containing an interaction between body size and the magnitude of precipitation change showed that mesofauna (e.g. mites, collembola) responded most to changes in precipitation. Changes in taxonomic richness were related solely to the magnitude of precipitation change. Our results suggest that body size is related to the ability of a taxon to survive under drought conditions, or to benefit from high precipitation. We also found that most experiments manipulated precipitation in a way that aligns better with predicted extreme climatic events than with predicted average annual changes in precipitation and that the experimental plots used in experiments were likely too small to accurately capture changes for mobile taxa. The relationship between body size and response to precipitation found here has far\uffe2\uff80\uff90reaching implications for our ability to predict future responses of soil biodiversity to climate change and will help to produce more realistic mechanistic soil models which aim to simulate the responses of soils to global change.</p", "keywords": ["2. Zero hunger", "Climate Change", "Rain", "evidence synthesis", "drought", "Biodiversity", "Forests", "15. Life on land", "Invertebrates", "6. Clean water", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "meta-analysis", "[SDE.MCG] Environmental Sciences/Global Changes", "Soil", "[SDV.EE.BIO] Life Sciences [q-bio]/Ecology", " environment/Bioclimatology", "climate change", "13. Climate action", "Animals", "Body Size", "precipitation change", "soil fauna"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/gcb.17305"}, {"href": "https://doi.org/1871.1/cb964ecd-1143-41f1-a24e-bba0bccf2ea8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1871.1/cb964ecd-1143-41f1-a24e-bba0bccf2ea8", "name": "item", "description": "1871.1/cb964ecd-1143-41f1-a24e-bba0bccf2ea8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1871.1/cb964ecd-1143-41f1-a24e-bba0bccf2ea8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-10T00:00:00Z"}}, {"id": "2164/13228", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:22:44Z", "type": "Journal Article", "created": "2016-08-08", "title": "Soil Fungal:Bacterial Ratios Are Linked to Altered Carbon Cycling", "description": "Despite several lines of observational evidence, there is a lack of consensus on whether higher fungal:bacterial (F:B) ratios directly cause higher soil carbon (C) storage. We employed RNA sequencing, protein profiling and isotope tracer techniques to evaluate whether differing F:B ratios are associated with differences in C storage. A mesocosm (13)C labeled foliar litter decomposition experiment was performed in two soils that were similar in their physico-chemical properties but differed in microbial community structure, specifically their F:B ratio (determined by PLFA analyses, RNA sequencing and protein profiling; all three corroborating each other). Following litter addition, we observed a consistent increase in abundance of fungal phyla; and greater increases in the fungal dominated soil; implicating the role of fungi in litter decomposition. Litter derived (13)C in respired CO2 was consistently lower, and residual (13)C in bulk SOM was higher in high F:B soil demonstrating greater C storage potential in the F:B dominated soil. We conclude that in this soil system, the increased abundance of fungi in both soils and the altered C cycling patterns in the F:B dominated soils highlight the significant role of fungi in litter decomposition and indicate that F:B ratios are linked to higher C storage potential.", "keywords": ["Microbiology (medical)", "Proteomics", "0301 basic medicine", "environment/Bioclimatology", "Supplementary Data", "[SDE.MCG]Environmental Sciences/Global Changes", "stable isotopes", "litter decomposition", "Microbiology", "03 medical and health sciences", "proteomics", "[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/Geochemistry", "[SDV.EE]Life Sciences [q-bio]/Ecology", "[SDU.STU.GC] Sciences of the Universe [physics]/Earth Sciences/Geochemistry", "soil carbon", "European Commission", "bacteria", "Stable isotopes", "2. Zero hunger", "655240", "0303 health sciences", "Bacteria", "Litter decomposition", "Fungi", "RNA sequencing", "QR Microbiology", "15. Life on land", "Soil carbon", "[SDU.ENVI] Sciences of the Universe [physics]/Continental interfaces", " environment", "QR1-502", "6. Clean water", "QR", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "[SDE.MCG] Environmental Sciences/Global Changes", "[SDV.EE] Life Sciences [q-bio]/Ecology", " environment", "[SDV.EE.BIO] Life Sciences [q-bio]/Ecology", " environment/Bioclimatology", "[SDV.EE.BIO]Life Sciences [q-bio]/Ecology", "fungi", "[SDE.BE]Environmental Sciences/Biodiversity and Ecology", "[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces", "environment"]}, "links": [{"href": "https://doi.org/2164/13228"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "2164/13228", "name": "item", "description": "2164/13228", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/2164/13228"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-08-09T00:00:00Z"}}, {"id": "39500340", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:23:25Z", "type": "Journal Article", "created": "2024-11-06", "title": "Population Genomics Reveals Demographic History and Climate Adaptation in Japanese Arabidopsis halleri", "description": "Abstract                <p>Climate oscillations in the Quaternary forced species to major latitudinal or altitudinal range shifts. It has been suggested that adaptation concomitant with range shifts plays key roles in species responses during climate oscillations, but the role of selection for local adaptation to climatic changes remains largely unexplored. Here, we investigated population structure, demographic history and signatures of climate-driven selection based on genome-wide polymorphism data of 141 Japanese Arabidopsis halleri individuals, with European ones as outgroups. Coalescent-based analyses suggested a genetic differentiation between Japanese subpopulations since the Last Glacial Period (LGP), which would have contributed to shaping the current pattern of population structure. Population demographic analysis revealed the population size fluctuations in the LGP, which were particularly prominent since the subpopulations started to diverge (\uffe2\uff88\uffbc50, 000 years ago). The ecological niche modeling predicted the geographic or distribution range shifts from southern coastal regions to northern coastal and mountainous areas, possibly in association with the population size fluctuations. Through genome-wide association analyses of bioclimatic variables and selection scans, we investigated whether climate-associated loci are enriched in the extreme tails of selection scans, and demonstrated the prevailing signatures of selection, particularly toward a warmer climate in southern subpopulations and a drier environment in northern subpopulations, which may have taken place during or after the LGP. Our study highlights the importance of integrating climate associations, selection scans and population demographic analyses for identifying genomic signatures of population-specific adaptation, which would also help us predict the evolutionary responses to future climate changes.</p", "keywords": ["Demographic history", "Arabidopsis halleri", "[SDV.EE.BIO] Life Sciences [q-bio]/Ecology", " environment/Bioclimatology", "Special Issue - Regular Paper", "Local adaptation", "[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants genetics", "[SDV.BID.EVO] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]", "[SDV.GEN.GPO] Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]", "Climate change", "Population genomics", "Glacial cycles"]}, "links": [{"href": "https://academic.oup.com/pcp/advance-article-pdf/doi/10.1093/pcp/pcae113/60430271/pcae113.pdf"}, {"href": "https://doi.org/39500340"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20And%20Cell%20Physiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "39500340", "name": "item", "description": "39500340", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/39500340"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-09-30T00:00:00Z"}}, {"id": "PMC12085087", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-09-21T16:24:40Z", "type": "Journal Article", "created": "2024-11-06", "title": "Population Genomics Reveals Demographic History and Climate Adaptation in Japanese Arabidopsis halleri", "description": "Abstract                <p>Climate oscillations in the Quaternary forced species to major latitudinal or altitudinal range shifts. It has been suggested that adaptation concomitant with range shifts plays key roles in species responses during climate oscillations, but the role of selection for local adaptation to climatic changes remains largely unexplored. Here, we investigated population structure, demographic history and signatures of climate-driven selection based on genome-wide polymorphism data of 141 Japanese Arabidopsis halleri individuals, with European ones as outgroups. Coalescent-based analyses suggested a genetic differentiation between Japanese subpopulations since the Last Glacial Period (LGP), which would have contributed to shaping the current pattern of population structure. Population demographic analysis revealed the population size fluctuations in the LGP, which were particularly prominent since the subpopulations started to diverge (\uffe2\uff88\uffbc50, 000 years ago). The ecological niche modeling predicted the geographic or distribution range shifts from southern coastal regions to northern coastal and mountainous areas, possibly in association with the population size fluctuations. Through genome-wide association analyses of bioclimatic variables and selection scans, we investigated whether climate-associated loci are enriched in the extreme tails of selection scans, and demonstrated the prevailing signatures of selection, particularly toward a warmer climate in southern subpopulations and a drier environment in northern subpopulations, which may have taken place during or after the LGP. Our study highlights the importance of integrating climate associations, selection scans and population demographic analyses for identifying genomic signatures of population-specific adaptation, which would also help us predict the evolutionary responses to future climate changes.</p", "keywords": ["Demographic history", "Arabidopsis halleri", "Local adaptation", "Climate", "Climate Change", "Acclimatization", "Arabidopsis", "Adaptation", " Physiological", "[SDV.EE.BIO] Life Sciences [q-bio]/Ecology", " environment/Bioclimatology", "Genetics", " Population", "Special Issue - Regular Paper", "Japan", "[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants genetics", "[SDV.BID.EVO] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]", "[SDV.GEN.GPO] Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]", "Climate change", "Selection", " Genetic", "Population genomics", "Glacial cycles", "Genome", " Plant", "Genome-Wide Association Study"]}, "links": [{"href": "https://academic.oup.com/pcp/advance-article-pdf/doi/10.1093/pcp/pcae113/60430271/pcae113.pdf"}, {"href": "https://doi.org/PMC12085087"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20And%20Cell%20Physiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "PMC12085087", "name": "item", "description": "PMC12085087", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PMC12085087"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-09-30T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=%5BSDV.EE.BIO%5D+Life+Sciences+%5Bq-bio%5D%2FEcology&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=%5BSDV.EE.BIO%5D+Life+Sciences+%5Bq-bio%5D%2FEcology&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=%5BSDV.EE.BIO%5D+Life+Sciences+%5Bq-bio%5D%2FEcology&", "hreflang": "en-US"}, {"rel": "last", "type": "application/geo+json", "title": "items (last)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=%5BSDV.EE.BIO%5D+Life+Sciences+%5Bq-bio%5D%2FEcology&offset=8", "hreflang": "en-US"}], "numberMatched": 8, "numberReturned": 8, "distributedFeatures": [], "timeStamp": "2026-09-21T17:54:13.484284Z"}