{"type": "FeatureCollection", "features": [{"id": "10.1016/j.envint.2020.106190", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:39Z", "type": "Journal Article", "created": "2020-10-26", "title": "Treated wastewater irrigation promotes the spread of antibiotic resistance into subsoil pore-water", "description": "In the present study, we investigated the impact of treated wastewater (TWW) irrigation on the prevalence of antibiotic resistance genes (ARGs) in subsoil pore-water, a so-far under-appreciated matrix. We hypothesized that TWW irrigation increases ARG prevalence in subsoil pore-water. This hypothesis was tested using a multiphase approach, which consisted of sampling percolated subsoil pore-water from lysimeter-wells of a real-scale TWW-irrigated field, operated for commercial farming practices, and controlled, laboratory microcosms irrigated with freshwater or TWW. We monitored the abundance of six selected ARGs (sul1, blaOXA-58, tetM, qnrS, blaCTX-M-32 and blaTEM), the intI1 gene associated with mobile genetic elements and an indicator for anthropogenic pollution and bacterial abundance (16S rRNA gene) by qPCR. The bacterial load of subsoil pore water was independent of both, irrigation intensity in the field study and irrigation water type in the microcosms. Among the tested genes in the field study, sul1 and intI1 exhibited constantly higher relative abundances. Their abundance was further positively correlated with increasing irrigation intensity. Controlled microcosm experiments verified the observed field study results: the relative abundance of several genes, including sul1 and intI1, increased significantly when irrigating with TWW compared to freshwater irrigation. Overall, TWW irrigation promoted the spread of ARGs and intI1 in the subsoil pore-water, while the bacterial load was maintained. The combined results from the real-scale agricultural field and the controlled lab microcosms indicate that the dissemination of ARGs in various subsurface environments needs to be taken into account during TWW irrigation scenarios.", "keywords": ["0301 basic medicine", "2. Zero hunger", "Agricultural Irrigation", "Antibiotic resistance", "Water", "Subsoil pore-water", "Drug Resistance", " Microbial", "Wastewater", "Wastewater reuse", "01 natural sciences", "6. Clean water", "Anti-Bacterial Agents", "Environmental sciences", "qPCR", "Soil", "03 medical and health sciences", "Genes", " Bacterial", "RNA", " Ribosomal", " 16S", "ARGs", "GE1-350", "Soil Microbiology", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envint.2020.106190"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environment%20International", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envint.2020.106190", "name": "item", "description": "10.1016/j.envint.2020.106190", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envint.2020.106190"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.1002/sae2.12031", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:12Z", "type": "Journal Article", "created": "2022-11-12", "title": "Frontiers in soil ecology\u2014Insights from the World Biodiversity Forum 2022", "description": "Abstract<p>Global change is affecting soil biodiversity and functioning across all terrestrial ecosystems. Still, much is unknown about how soil biodiversity and function will change in the future in response to simultaneous alterations in climate and land use, as well as other environmental drivers. It is crucial to understand the direct, indirect\uffc2\uffa0and interactive effects of global change drivers on soil communities and ecosystems across environmental contexts, not only today but also in the near future. This is particularly relevant for international efforts to tackle climate change like the Paris Agreement, and considering the failure to achieve the 2020 biodiversity targets, especially the target of halting soil degradation. Here, we outline the main frontiers related to soil ecology that were presented and discussed at the thematic sessions of the World Biodiversity Forum 2022 in Davos, Switzerland. We highlight multiple frontiers of knowledge associated with data integration, causal inference, soil biodiversity and function scenarios, critical soil biodiversity facets, underrepresented drivers, global collaboration, knowledge application and transdisciplinarity, as well as policy and public communication. These identified research priorities are not only of immediate interest to the scientific community but may also be considered in research priority programmes and calls for funding.</p", "keywords": ["[SDE] Environmental Sciences", "0301 basic medicine", "570", "Agriculture (General)", "577", "soil biodiversity", "scenario modelling", "580 Plants (Botany)", "S1-972", "03 medical and health sciences", "10126 Department of Plant and Microbial Biology", "11. Sustainability", "Life Science", "GE1-350", "10211 Zurich-Basel Plant Science Center", "Biology", "soil macroecology", "Biodiversity change", "2. Zero hunger", "Soil macroecology", "0303 health sciences", "15. Life on land", "Scenario modelling", "Soil biodiversity", "6. Clean water", "Environmental sciences", "biodiversity change", "13. Climate action", "ecosystem functioning", "[SDE]Environmental Sciences", "Ecosystem functioning", "ta1181"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1002/sae2.12031"}, {"href": "https://doi.org/10.1002/sae2.12031"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Sustainable%20Agriculture%20and%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/sae2.12031", "name": "item", "description": "10.1002/sae2.12031", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/sae2.12031"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-11T00:00:00Z"}}, {"id": "10.1007/s00128-012-0523-0", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:24Z", "type": "Journal Article", "created": "2012-01-25", "title": "Effect Of Long-Term Zinc Pollution On Soil Microbial Community Resistance To Repeated Contamination", "description": "The aim of the study was to compare the effects of stress (contamination trials) on the microorganisms in zinc-polluted soil (5,018\u00a0mg Zn\u00a0kg(-1) soil dry weight) and unpolluted soil (141\u00a0mg Zn kg(-1) soil\u00a0dw), measured as soil respiration rate. In the laboratory, soils were subjected to copper contamination (0, 500, 1,500 and 4,500\u00a0mg\u00a0kg(-1) soil\u00a0dw), and then a bactericide (oxytetracycline) combined with a fungicide (captan) along with glucose (10\u00a0mg\u00a0g(-1) soil\u00a0dw each) were added. There was a highly significant effect of soil type, copper treatment and oxytetracycline/captan treatment. The initial respiration rate of chronically zinc-polluted soil was higher than that of unpolluted soil, but in the copper treatment it showed a greater decline. Microorganisms in copper-treated soil were more susceptible to oxytetracycline/captan contamination. After the successive soil contamination trials the decline of soil respiration was greater in zinc-polluted soil than in unpolluted soil.", "keywords": ["Health", " Toxicology and Mutagenesis", "trace metals", "Oxytetracycline", "Toxicology", "01 natural sciences", "Article", "Captan", "Soil", "Stress", " Physiological", "Soil Pollutants", "Soil Microbiology", "combined stressors", "0105 earth and related environmental sciences", "soil pollution", "Drug Resistance", " Microbial", "04 agricultural and veterinary sciences", "Pollution", "Adaptation", " Physiological", "soil respiration rate", "6. Clean water", "Anti-Bacterial Agents", "Fungicides", " Industrial", "Zinc", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Copper"], "contacts": [{"organization": "Klimek, Beata", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s00128-012-0523-0"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bulletin%20of%20Environmental%20Contamination%20and%20Toxicology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00128-012-0523-0", "name": "item", "description": "10.1007/s00128-012-0523-0", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00128-012-0523-0"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-01-26T00:00:00Z"}}, {"id": "10.1007/s00248-013-0225-0", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:25Z", "type": "Journal Article", "created": "2013-04-15", "title": "Agricultural Management And Labile Carbon Additions Affect Soil Microbial Community Structure And Interact With Carbon And Nitrogen Cycling", "description": "We investigated how conversion from conventional agriculture to organic management affected the structure and biogeochemical function of soil microbial communities. We hypothesized the following. (1) Changing agricultural management practices will alter soil microbial community structure driven by increasing microbial diversity in organic management. (2) Organically managed soil microbial communities will mineralize more N and will also mineralize more N in response to substrate addition than conventionally managed soil communities. (3) Microbial communities under organic management will be more efficient and respire less added C. Soils from organically and conventionally managed agroecosystems were incubated with and without glucose ((13)C) additions at constant soil moisture. We extracted soil genomic DNA before and after incubation for TRFLP community fingerprinting of soil bacteria and fungi. We measured soil C and N pools before and after incubation, and we tracked total C respired and N mineralized at several points during the incubation. Twenty years of organic management altered soil bacterial and fungal community structure compared to continuous conventional management with the bacterial differences caused primarily by a large increase in diversity. Organically managed soils mineralized twice as much NO3 (-) as conventionally managed ones (44 vs. 23 \u03bcg N/g soil, respectively) and increased mineralization when labile C was added. There was no difference in respiration, but organically managed soils had larger pools of C suggesting greater efficiency in terms of respiration per unit soil C. These results indicate that the organic management induced a change in community composition resulting in a more diverse community with enhanced activity towards labile substrates and greater capacity to mineralize N.", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Environmental Microbiology and Microbial Ecology", "Bacteria", "Nitrogen", "Fungal Community Structure", "Agriculture", "Nitrogen Cycle", "15. Life on land", "Microbiology", "630", "Carbon", "Carbon Cycle", "Soil", "03 medical and health sciences", "rRNA Gene Copy", "Soil Microbial Community Structure", "fungal community", "Biology", "Ecosystem", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1007/s00248-013-0225-0"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Microbial%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00248-013-0225-0", "name": "item", "description": "10.1007/s00248-013-0225-0", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00248-013-0225-0"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-04-16T00:00:00Z"}}, {"id": "10.1007/s00253-020-10982-5", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:26Z", "type": "Journal Article", "created": "2020-11-11", "title": "Living with sulfonamides: a diverse range of mechanisms observed in bacteria", "description": "Sulfonamides are the oldest class of synthetic antibiotics still in use in clinical and veterinary settings. The intensive utilization of sulfonamides has been leading to the widespread contamination of the environment with these xenobiotic compounds. Consequently, in addition to pathogens and commensals, also bacteria inhabiting a wide diversity of environmental compartments have been in contact with sulfonamides for almost 90\u00a0years. This review aims at giving an overview of the effect of sulfonamides on bacterial cells, including the strategies used by bacteria to cope with these bacteriostatic agents. These include mechanisms of antibiotic resistance, co-metabolic transformation, and partial or total mineralization of sulfonamides. Possible implications of these mechanisms on the ecosystems and dissemination of antibiotic resistance are also discussed. KEY POINTS: \u2022 Sulfonamides are widespread xenobiotic pollutants; \u2022 Target alteration is the main sulfonamide resistance mechanism observed in bacteria; \u2022 Sulfonamides can be modified, degraded, or used as nutrients by some bacteria.", "keywords": ["0301 basic medicine", "Sulfonamides", "0303 health sciences", "Bacteria", "Antibiotic resistance", "Drug Resistance", " Microbial", "Anti-Bacterial Agents", "3. Good health", "03 medical and health sciences", "Biodegradation", " Environmental", "Biodegradation", "Xenobiotic", "Biotransformation", "Ecosystem"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s00253-020-10982-5.pdf"}, {"href": "https://doi.org/10.1007/s00253-020-10982-5"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Microbiology%20and%20Biotechnology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00253-020-10982-5", "name": "item", "description": "10.1007/s00253-020-10982-5", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00253-020-10982-5"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-11-11T00:00:00Z"}}, {"id": "10.1007/s00442-005-0249-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:35Z", "type": "Journal Article", "created": "2005-10-04", "title": "Fungal Community Composition And Metabolism Under Elevated Co2 And O-3", "description": "Atmospheric CO(2) and O(3) concentrations are increasing due to human activity and both trace gases have the potential to alter C cycling in forest ecosystems. Because soil microorganisms depend on plant litter as a source of energy for metabolism, changes in the amount or the biochemistry of plant litter produced under elevated CO(2) and O(3) could alter microbial community function and composition. Previously, we have observed that elevated CO(2) increased the microbial metabolism of cellulose and chitin, whereas elevated O(3) dampened this response. We hypothesized that this change in metabolism under CO(2) and O(3) enrichment would be accompanied by a concomitant change in fungal community composition. We tested our hypothesis at the free-air CO(2) and O(3) enrichment (FACE) experiment at Rhinelander, Wisconsin, in which Populus tremuloides, Betula papyrifera, and Acer saccharum were grown under factorial CO(2) and O(3) treatments. We employed extracellular enzyme analysis to assay microbial metabolism, phospholipid fatty acid (PLFA) analysis to determine changes in microbial community composition, and polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) to analyze the fungal community composition. The activities of 1,4-beta-glucosidase (+37%) and 1,4,-beta-N-acetylglucosaminidase (+84%) were significantly increased under elevated CO(2), whereas 1,4-beta-glucosidase activity (-25%) was significantly suppressed by elevated O(3). There was no significant main effect of elevated CO(2) or O(3) on fungal relative abundance, as measured by PLFA. We identified 39 fungal taxonomic units from soil using DGGE, and found that O(3) enrichment significantly altered fungal community composition. We conclude that fungal metabolism is altered under elevated CO(2) and O(3), and that there was a concomitant change in fungal community composition under elevated O(3). Thus, changes in plant inputs to soil under elevated CO(2) and O(3) can propagate through the microbial food web to alter the cycling of C in soil.", "keywords": ["0106 biological sciences", "Food Chain", "Extracellular Enzymes", "Science", "Ecology and Evolutionary Biology", "Polymerase Chain Reaction\u2013Denaturing Gradient Gel Electrophoresis", "Polymerase Chain Reaction", "01 natural sciences", "Soil Microbial Community", "Soil", "Ozone", "Health Sciences", "Acetylglucosaminidase", "Cellular and Developmental Biology", "Ecosystem", "Soil Microbiology", "beta-Glucosidase", "Fatty Acids", "Fungi", "Natural Resources and Environment", "Molecular", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "Fungal Metabolism", "Carbon", "Free-air CO 2 and O 3 Enrichment", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Extracellular Space"]}, "links": [{"href": "https://doi.org/10.1007/s00442-005-0249-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-005-0249-3", "name": "item", "description": "10.1007/s00442-005-0249-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-005-0249-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-10-05T00:00:00Z"}}, {"id": "10.1007/s00374-007-0214-x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:29Z", "type": "Journal Article", "created": "2007-06-14", "title": "Impact Of Fire On Fungal Abundance And Microbial Efficiency In C Assimilation And Mineralisation In A Mediterranean Maquis Soil", "description": "The present study investigates the impact of fire (low and high severity) on soil fungal abundance and microbial efficiency in C assimilation and mineralisation in a Mediterranean maquis area of Southern Italy over 2 years after fire. In burned and control soils total and active fungal mycelium, microbial biomass C, percentage of microbial biomass C present as fungal C, metabolic quotient (qCO2) and coefficient of endogenous mineralisation (CEM) were assayed together with several chemical properties of soil (i.e. pH and contents of organic C, total and mineral N, available K, Mg, Mn and water). Fire significantly decreased the fungal mycelium, whereas it stimulated microbial growth probably through the enhancement of bacterial growth because of the increase in organic C and nutrient contents in burned plots. This shift in microbial community composition might explain the observed reduction in soil microbial efficiency of C assimilation (high qCO2) and the increase in C mineralisation rate (CEM) in the first 84 days after fire. Therefore, fire might increase CO2 input to the atmosphere not only during combustion phase but also in the post-fire period.", "keywords": ["2. Zero hunger", "CEM; Fire severity; Fungal mycelium; Microbial biomass; qCO; 2;", "fungal mycelium", "fire severity", "microbial biomass", "13. Climate action", "microbial biomass; fungal mycelium; fire severity", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1007/s00374-007-0214-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biology%20and%20Fertility%20of%20Soils", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00374-007-0214-x", "name": "item", "description": "10.1007/s00374-007-0214-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00374-007-0214-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-06-15T00:00:00Z"}}, {"id": "10.1007/s00374-007-0254-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:30Z", "type": "Journal Article", "created": "2007-12-10", "title": "Soil Organic Phosphorus And Microbial Community Composition As Affected By 26 Years Of Different Management Strategies", "description": "Open AccessBiology and Fertility of Soils, 44 (5)", "keywords": ["2. Zero hunger", "550", "crop rotation; FAME; microbial community composition; solution P-31 NMR spectroscopy; soil organic phosphorus", "microbial community composition", "Solution 31P NMR spectroscopy", "04 agricultural and veterinary sciences", "solution P-31 NMR spectroscopy", "15. Life on land", "soil organic phosphorus", "630", "6. Clean water", "FAME", "Microbial community composition", "crop rotation", "Crop rotation", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Soil organic phosphorus"]}, "links": [{"href": "https://doi.org/10.1007/s00374-007-0254-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biology%20and%20Fertility%20of%20Soils", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00374-007-0254-2", "name": "item", "description": "10.1007/s00374-007-0254-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00374-007-0254-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-12-11T00:00:00Z"}}, {"id": "10.1007/s00374-010-0455-y", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:30Z", "type": "Journal Article", "created": "2010-03-26", "title": "Reversing Agriculture From Intensive To Sustainable Improves Soil Quality In A Semiarid South Italian Soil", "description": "Intensive agriculture (IA) is widespread in South Italy, although it requires frequent tillage, large amounts of fertilizers and irrigation water. We have assessed the efficacy of reversing IA to sustainable agriculture (SA) in recovering quality of a typical South Italy soil (Lithic Haploxeralf). This reversion, lasting from 2000 to 2007, replaced 75% of nutrients formerly supplied inorganically by farmyard manuring and reduced the tillage frequency. Several chemical and biochemical properties, functionally related to C and N mineralisation\u2013immobilisation processes and to P and S nutrient cycles, were monitored annually from 2005 to 2007 in the spring. Reversing IA to SA decreased soil bulk density, almost doubled the soil organic matter (SOM) as favoured the immobilisation of C and N, increased most soil microbial indicators but decreased contents of nitrate, mineral N and K2SO4-extractable C. The K2SO4-extractable C/K2SO4-extractable organic N ratio suggested that substrate quality rather than the mass of readily available C and N affected biomass and activity of soil microflora. Also, the largely higher 10-day-evolved CO2\u2013C-to-inorganic N ratio under SA than IA indicated that higher C mineralisation, associated with higher microbial biomass N immobilisation, occurred under SA than IA. Decreases in most soil enzyme activities under IA, compared to SA, were much higher than concomitant decreases in SOM content. Soil salinity and sodicity were always higher in IA than SA soil, although not critically high, likely due to the intensive inorganic fertilisation as irrigation waters were qualitatively and quantitatively the same between the two soils. Thus, we suggest that the cumulative small but long-term saline (osmotic) and sodic (dispersing) effects in IA soil decreased the microbial variables more than total organic C and increased soil bulk density.", "keywords": ["2. Zero hunger", "Soil quality; Sustainable agriculture; Soil microbial biomass; Microbial activity; Semiarid Mediterranean environment", "Sustainable agriculture", "Soil microbial biomass", "Soil quality ; Sustainable agriculture .; Soil chemstry", "04 agricultural and veterinary sciences", "15. Life on land", "Soil quality", "6. Clean water", "12. Responsible consumption", "Microbial activity", "Semiarid Mediterranean environment", "13. Climate action", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "https://doi.org/10.1007/s00374-010-0455-y"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biology%20and%20Fertility%20of%20Soils", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00374-010-0455-y", "name": "item", "description": "10.1007/s00374-010-0455-y", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00374-010-0455-y"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-03-27T00:00:00Z"}}, {"id": "10.1007/s00374-012-0708-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:31Z", "type": "Journal Article", "created": "2012-06-04", "title": "Short-Term Effects Of Forest Recovery On Soil Carbon And Nutrient Availability In An Experimental Chestnut Stand", "description": "Soil organic matter (SOM) pools and soil available calcium (Caexch) were monitored during a 4-year period in an experimental chestnut stand treated for the restoration of timber production. In 2004 the stand was cut and stumps were grafted. Before the forestry operations, the biocycling process seemed to contrast soil nutrient loss, returning Ca to mineral soil through plant activity. Therefore, we hypothesized that the regrowing vegetation after forestry operations would supply Ca to the soil surface and maintain a certain soil fertility level. In fact, from 2005, a progressive recovery of 460\u00a0mg Caexch kg\u22121\u00a0year\u22121 at the soil surface was found, corresponding to about 5\u00a0% of the Ca of the leaf litter (8,605\u00a0mg Ca kg\u22121, chestnut leaves sampled in 2007). However, the Caexch seemed to depend on the humified C (r                 2\u2009=\u20090.858; p\u2009<\u20090.01). At the soil surface, the humified C decreased. Therefore, other processes involving SOM dynamics may be taken into account. After the first year, the scarce presence of litter layer at the soil surface could have exacerbated soil erosion and reduction of SOM content, as shown by the change in horizon thickness and C amount. In later years a litterfall layer was present due to the regrowing vegetation and soil erosion was reduced, but SOM turnover did not change. In parallel the amount of microbial biomass C and soil respiration increased. Because the addition of new C source from regrowing vegetation can stimulate soil microbial activity, we hypothesized that the occurrence of a priming effect in our soil could further affect soil C and nutrient availability in later years management change.", "keywords": ["2. Zero hunger", "SOIL ORGANIC MATTER; CALCIUM; MICROBIAL BIOMASS; BIOCYCLING; PRIMING EFFECT", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land"]}, "links": [{"href": "https://doi.org/10.1007/s00374-012-0708-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biology%20and%20Fertility%20of%20Soils", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00374-012-0708-z", "name": "item", "description": "10.1007/s00374-012-0708-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00374-012-0708-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-06-05T00:00:00Z"}}, {"id": "10.1007/s00442-004-1540-4", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:35Z", "type": "Journal Article", "created": "2004-03-19", "title": "Feedback Interactions Between Needle Litter Decomposition And Rhizosphere Activity", "description": "The aim of our study was to identify interactions between the decomposition of aboveground litter and rhizosphere activity. The experimental approach combined the placement of labelled litter (delta13C=-37.9 per thousand ) with forest girdling in a 35-year-old Norway spruce stand, resulting in four different treatment combinations: GL (girdled, litter), GNL (girdled, no litter), NGL (not girdled, litter), and NGNL (not girdled, no litter). Monthly sampling of soil CO2 efflux and delta13C of soil respired CO2 between May and October 2002 allowed the partitioning of the flux into that derived from the labelled litter, and that derived from native soil organic matter and roots. The effect of forest girdling on soil CO2 efflux was detectable from June (girdling took place in April), and resulted in GNL fluxes to be about 50% of NGNL fluxes by late August. The presence of litter resulted in significantly increased fluxes for the first 2 months of the experiment, with significantly greater litter derived fluxes from non-girdled plots and a significant interaction between girdling and litter treatments over the same period. For NGL collars, the additional efflux was found to originate only in part from litter decomposition, but also from the decay of native soil organic matter. In GL collars, this priming effect was not significant, indicating an active role of the rhizosphere in soil priming. The results therefore indicate mutual positive feedbacks between litter decomposition and rhizosphere activity. Soil biological analysis (microbial and fungal biomass) of the organic layers indicated greatest activity below NGL collars, and we suppose that this increase indicates the mechanism of mutual positive feedback between rhizosphere activity and litter decomposition. However, elimination of fresh C input from both above- and belowground (GNL) also resulted in greater fungal abundance than for the NGNL treatment, indicating likely changes in fungal community structure (i.e. a shift from symbiotic to saprotrophic species abundance).", "keywords": ["570", "Soil ecology", "Microbial biomass", "Models", " Biological", "630", "Soil", "Biomass", "Picea", "Forest girdling; Microbial biomass; Soil CO; 2; efflux; Soil organic matter; Stable C isotopes;", "Ecosystem", "Soil Microbiology", "Soil CO2 efflux", "Feedback", " Physiological", "Soil organic matter", "Carbon Isotopes", "Fungi", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "Microbial growth", "Stable C isotopes", "Plant Leaves", "13. Climate action", "Soils", "0401 agriculture", " forestry", " and fisheries", "Forest girdling", "Seasons"]}, "links": [{"href": "https://doi.org/10.1007/s00442-004-1540-4"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-004-1540-4", "name": "item", "description": "10.1007/s00442-004-1540-4", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-004-1540-4"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-05-01T00:00:00Z"}}, {"id": "10.1007/s10123-021-00215-8", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-03T16:14:43Z", "type": "Journal Article", "created": "2021-10-23", "title": "Novel methods of microbiome analysis in the food industry", "description": "The study of the food microbiome has gained considerable interest in recent years, mainly due to the wide range of applications that can be derived from the analysis of metagenomes. Among these applications, it is worth mentioning the possibility of using metagenomic analyses to determine food authenticity, to assess the microbiological safety of foods thanks to the detection and tracking of pathogens, antibiotic resistance genes and other undesirable traits, as well to identify the microorganisms responsible for food processing defects. Metataxonomics and metagenomics are currently the gold standard methodologies to explore the full potential of metagenomes in the food industry. However, there are still a number of challenges that must be solved in order to implement these methods routinely in food chain monitoring, and for the regulatory agencies to take them into account in their opinions. These challenges include the difficulties of analysing foods and food-related environments with a low microbial load, the lack of validated bioinformatics pipelines adapted to food microbiomes and the difficulty of assessing the viability of the detected microorganisms. This review summarizes the methods of microbiome analysis that have been used, so far, in foods and food-related environments, with a specific focus on those involving Next-Generation Sequencing technologies.", "keywords": ["2. Zero hunger", "0301 basic medicine", "Food metagenome", "0303 health sciences", "Food microbiome", "3309 Tecnolog\u00eda de Los Alimentos", "Tecnolog\u00eda de los alimentos", "Metataxonomics", "Microbiota", "3309.90 Microbiolog\u00eda de Alimentos", "Drug Resistance", " Microbial", "Resistome", "03 medical and health sciences", "Food Industry", "Metagenome", "Metagenomics"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s10123-021-00215-8.pdf"}, {"href": "https://doi.org/10.1007/s10123-021-00215-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/International%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10123-021-00215-8", "name": "item", "description": "10.1007/s10123-021-00215-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10123-021-00215-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-10-23T00:00:00Z"}}, {"id": "10.1016/j.bioelechem.2021.107937", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:13Z", "type": "Journal Article", "created": "2021-08-21", "title": "Nanoscaffold effects on the performance of air-cathodes for microbial fuel cells: Sustainable Fe/N-carbon electrocatalysts for the oxygen reduction reaction under neutral pH conditions", "description": "Nanostructured electrocatalysts for microbial fuel cell air-cathodes were obtained via use of conductive carbon blacks for the synthesis of high performing 3D conductive networks. We used two commercially available nanocarbons, Black Pearls 2000 and multiwalled carbon nanotubes, as conductive scaffolds for the synthesis of nanocomposite electrodes by combining: a hydrothermally carbonized resin, a sacrificial polymeric template, a nitrogenated organic precursor and iron centers. The resulting materials are micro-mesoporous, possess high specific surface area and display N-sites (N/C of 3-5 at%) and Fe-centers (Fe/C\u00a0<\u00a01.5at.%) at the carbon surface as evidenced from characterization methods. Voltammetry studies of oxygen reduction reaction activity were carried out at neutral pH, which is relevant to microbial fuel cell applications, and activity trends are discussed in light of catalyst morphology and composition. Tests of the electrocatalyst using microbial fuel cell devices indicate that optimization of the nanocarbon scaffold for the Pt-free carbon-based electrocatalysts results in maximum power densities that are 25% better than those of Pt/C cathodes, at a fraction of the materials costs. Therefore, the proposed Fe/N-carbon catalysts are promising and sustainable high-performance cathodic materials for microbial fuel cells.", "keywords": ["Bioelectric Energy Sources", "Nanotubes", " Carbon", "Microbial fuel cells", "Electric Conductivity", "7. Clean energy", "01 natural sciences", "Carbon", "Catalysis", "Oxygen reduction reaction", "[PHYS] Physics [physics]", "12. Responsible consumption", "0104 chemical sciences", "Air cathode; Carbon; Electrocatalysis; Microbial fuel cells; Oxygen reduction reaction", "13. Climate action", "[CHIM] Chemical Sciences", "Air cathode", "Electrocatalysis"]}, "links": [{"href": "https://air.unimi.it/bitstream/2434/868457/2/1-s2.0-S1567539421002000-main.pdf"}, {"href": "https://doi.org/10.1016/j.bioelechem.2021.107937"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bioelectrochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.bioelechem.2021.107937", "name": "item", "description": "10.1016/j.bioelechem.2021.107937", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.bioelechem.2021.107937"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-12-01T00:00:00Z"}}, {"id": "10.1007/s10533-018-0448-8", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:51Z", "type": "Journal Article", "created": "2018-05-05", "title": "The biogeochemical consequences of litter transformation by insect herbivory in the Subarctic: a microcosm simulation experiment", "description": "Warming may increase the extent and intensity of insect defoliations within Arctic ecosystems. A thorough understanding of the implications of this for litter decomposition is essential to make predictions of soil-atmosphere carbon (C) feedbacks. Soil nitrogen (N) and C cycles naturally are interlinked, but we lack a detailed understanding of how insect herbivores impact these cycles. In a laboratory microcosm study, we investigated the growth responses of heterotrophic soil fungi and bacteria as well as C and N mineralisation to simulated defoliator outbreaks (frass addition), long-term increased insect herbivory (litter addition at higher background N-level) and non-outbreak conditions (litter addition only) in soils from a Subarctic birch forest. Larger amounts of the added organic matter were mineralised in the outbreak simulations compared to a normal year; yet, the fungal and bacterial growth rates and biomass were not significantly different. In the simulation of long-term increased herbivory, less litter C was respired per unit mineralised N (C:N of mineralisation decreased to 20\u2009\u00b1\u20091 from 38\u2009\u00b1\u20093 for pure litter), which suggests a directed microbial mining for N-rich substrates. This was accompanied by higher fungal dominance relative to bacteria and lower total microbial biomass. In conclusion, while a higher fraction of foliar C will be respired by insects and microbes during outbreak years, predicted long-term increases in herbivory linked to climate change may facilitate soil C-accumulation, as less foliar C is respired per unit mineralised N. Further work elucidating animal-plant-soil interactions is needed to improve model predictions of C-sink capacity in high latitude forest ecosystems.", "keywords": ["Ekologi", "0106 biological sciences", "Ecology", "herbivory", "Subarctic birch forest", "nitrogen mineralisation", "04 agricultural and veterinary sciences", "15. Life on land", "soil respiration", "soil microbial ecology", "01 natural sciences", "biogeochemistry", "13. Climate action", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s10533-018-0448-8.pdf"}, {"href": "https://doi.org/10.1007/s10533-018-0448-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biogeochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10533-018-0448-8", "name": "item", "description": "10.1007/s10533-018-0448-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10533-018-0448-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-05-01T00:00:00Z"}}, {"id": "10.1007/s10646-013-1139-9", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:14:52Z", "type": "Journal Article", "created": "2013-10-11", "title": "Soil Biological Attributes In Arsenic-Contaminated Gold Mining Sites After Revegetation", "description": "Recovery of arsenic contaminated areas is a challenge society faces throughout the world. Revegetation associated with microbial activity can play an essential role in this process. This work investigated biological attributes in a gold mining area with different arsenic contents at different sites under two types of extant revegetation associated with cover layers of the soil: BS, Brachiaria sp. and Stizolobium sp., and LEGS, Acacia crassicarpa, A. holosericea, A. mangium, Sesbania virgata, Albizia lebbeck and Pseudosamanea guachapele. References were also evaluated, comprising the following three sites: B1, weathered sulfide substrate without revegetation; BM, barren material after gold extraction and PRNH (private reserve of natural heritage), an uncontaminated forest site near the mining area. The organic and microbial biomass carbon contents and substrate-induced respiration rates for these sites from highest to lowest were: PRNH > LEGS > BS > B1 and BM. These attributes were negatively correlated with soluble and total arsenic concentration in the soil. The sites that have undergone revegetation (LEGS and BS) had higher densities of bacteria, fungi, phosphate solubilizers and ammonium oxidizers than the sites without vegetation. Principal component analysis showed that the LEGS site grouped with PRNH, indicating that the use of leguminous species associated with an uncontaminated soil cover layer contributed to the improvement of the biological attributes. With the exception of acid phosphatase, all the biological attributes were indicators of soil recovery, particularly the following: microbial carbon, substrate-induced respiration, density of culturable bacteria, fungi and actinobacteria, phosphate solubilizers and metabolic quotient.", "keywords": ["Arsenic - Contamination", "Microbial biomass", "Quociente microbial", "01 natural sciences", "Mining", "Arsenic", "Photometry", "Respira\u00e7\u00e3o induzida por substrato", "Soil", "Substrate-induced respiration", "Soil Pollutants", "Biomass", "Microbial quotient", "Soil Microbiology", "0105 earth and related environmental sciences", "Ars\u00eanico - Contamina\u00e7\u00e3o", "Spectrophotometry", " Atomic", "Biomassa microbiana", "Phosphate solubilizers", "Solubilizantes de fosfato", "04 agricultural and veterinary sciences", "15. Life on land", "Biodegradation", " Environmental", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Brazil", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.1007/s10646-013-1139-9"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecotoxicology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10646-013-1139-9", "name": "item", "description": "10.1007/s10646-013-1139-9", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10646-013-1139-9"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-10-11T00:00:00Z"}}, {"id": "10.1007/s11104-008-9853-4", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:15:03Z", "type": "Journal Article", "created": "2008-12-19", "title": "White Lupin Leads To Increased Maize Yield Through A Soil Fertility-Independent Mechanism: A New Candidate For Fighting Striga Hermonthica Infestation?", "description": "Open AccessISSN:0032-079X", "keywords": ["2. Zero hunger", "Lupinus albus; Desmodium uncinatum; Striga hermonthica; Zea mays; Soil fertility; Cluster roots", "04 agricultural and veterinary sciences", "580 Plants (Botany)", "15. Life on land", "Soil fertility", "Zea mays", "Cluster roots", "10126 Department of Plant and Microbial Biology", "Lupinus albus", "Desmodium uncinatum", "1110 Plant Science", "Striga hermonthica", "0401 agriculture", " forestry", " and fisheries", "1111 Soil Science"]}, "links": [{"href": "https://doi.org/10.1007/s11104-008-9853-4"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-008-9853-4", "name": "item", "description": "10.1007/s11104-008-9853-4", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-008-9853-4"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-12-20T00:00:00Z"}}, {"id": "10.1007/s11104-016-3073-0", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-03T16:15:12Z", "type": "Journal Article", "created": "2016-10-10", "title": "Response Of Soil Microbial Community To Afforestation With Pure And Mixed Species", "description": "\u00a9 2016, Springer International Publishing Switzerland.Objectives: Afforestation changes soil chemical properties over several decades. In contrast, microbial community structure can be shifted within the first decade and so, the direct effects of tree species can be revealed. The aim of this study was to determine the alteration of soil microbial community composition 10\u00a0years after afforestation by trees with contrasting functional traits. Methods: The study was conducted at the BangorDIVERSE temperate forest experiment. Soil samples were collected under single, two and three species mixtures of alder and birch, beech and oak - early and secondary successional species, respectively, and contiguous agricultural field. Soil was analysed for total carbon (C) and nitrogen (N) contents, and microbial community structure (phospholipid fatty acids (PLFAs) analysis). Results and conclusions: The total PLFAs content (370\u2013640\u00a0nmol\u00a0g\u22121soil) in forest plots increased for 30 to 110\u00a0% compared to the agricultural soil (290\u00a0nmol\u00a0g\u22121soil). In contrast, soil C, N and C/N ratios were altered over 10\u00a0years much less - increased only up to 20\u00a0% or even decreased (for beech forest). Afforestation increased bacterial PLFAs by 20\u2013120\u00a0%, whereas it had stronger impact on the development of fungal communities (increased by 50\u2013200\u00a0%). These effects were proved for all forests, but were more pronounced under the monocultures compared to mixtures. This indicates that species identity has a stronger effect than species diversity. Principal component analysis of PLFAs revealed that under mono and three species mixtures similar microbial communities were formed. In contrast, gram-positive PLFAs and actinomycete PLFAs contributed mainly to differentiation of two species mixtures from other forests. Thus, at the early afforestation stage: i) soil biological properties are altered more than chemical, and ii) tree species identity affects more than species amount on both processes.", "keywords": ["2. Zero hunger", "570", "Microbial biomarkers", "Plant microbial interactions", "Soil solution", "Tree identity", "0401 agriculture", " forestry", " and fisheries", "Woodland", "04 agricultural and veterinary sciences", "15. Life on land", "Land use change", "Ammonium and nitrate", "Forest composition"]}, "links": [{"href": "https://doi.org/10.1007/s11104-016-3073-0"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-016-3073-0", "name": "item", "description": "10.1007/s11104-016-3073-0", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-016-3073-0"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-10-10T00:00:00Z"}}, {"id": "10.1007/s11104-012-1248-x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:15:08Z", "type": "Journal Article", "created": "2012-05-04", "title": "Effects Of Simulated Drought And Nitrogen Fertilizer On Plant Productivity And Nitrous Oxide (N2o) Emissions Of Two Pastures", "description": "Open AccessISSN:0032-079X", "keywords": ["Soil acidity", "Drought", "Soil microbial C and N", "04 agricultural and veterinary sciences", "15. Life on land", "Grassland", "Nitrification", "10127 Institute of Evolutionary Biology and Environmental Studies", "Grazing", "Greenhouse gases", "Summer drought", "13. Climate action", "1110 Plant Science", "Denitrification", "570 Life sciences; biology", "590 Animals (Zoology)", "0401 agriculture", " forestry", " and fisheries", "Compensatory growth; Denitrification; Drought; Grassland; Grazing; Greenhouse gases; Soil microbial C and N; Soil acidity; Nitrification; Summer drought", "Compensatory growth", "1111 Soil Science"]}, "links": [{"href": "https://doi.org/10.1007/s11104-012-1248-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-012-1248-x", "name": "item", "description": "10.1007/s11104-012-1248-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-012-1248-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-05-05T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2023.116399", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:17:05Z", "type": "Journal Article", "created": "2023-02-27", "title": "One-time freeze-thawing or carbon input events have long-term legacies in soil microbial communities", "description": "Soil microbial communities are regularly exposed to sudden changes in environmental conditions, such as root exudation pulses or freeze-thaw events. As microbial communities have a high potential to adapt to changing conditions, they are expected to be resilient towards this kind of short-term perturbations and return to their pre-perturbed state quickly. Here, we conducted a lab incubation experiment to evaluate the resilience of soil microbial communities to single-pulse perturbations.<br/><br/>We incubated temperate forest soil at constant temperature (20 \u00b0C) and water content, and exposed it to strong single-pulse perturbations, which nonetheless mimic common pulse-events in temperate soils (glucose addition at 4 mg g\u22121 soil, or freeze-thawing overnight at \u221220 \u00b0C). We subsequently measured microbial community composition and microbial storage compounds via phospho- and neutral lipid fatty acid (PLFA and NLFA) profiling, as well as C/N stoichiometry of microbial biomass and dissolved organic carbon and nitrogen in the soil solution shortly after (0.4, 1, 4, and 6 days) and after longer time periods (84 and 160 days) following the perturbations.<br/><br/>Transferring the soils from their natural environment to the laboratory and incubating them under controlled conditions led to a continuous change of microbial community structure over time, along with an increase in microbial biomass and dissolved N in both perturbed and control soils over the time of the experiment. Against the background of this \u2018press-disturbance\u2019, caused by the permanently changed conditions, we see immediate and long-lasting effects of the single pulse events on microbial community composition, C storage and C/N stoichiometry. Both perturbations significantly influenced the microbial community structure (based on PLFA profiles), microbial biomass N and dissolved N up to 160 days, as well as fungal and bacterial biomass and storage (based on absolute PLFA and NLFA concentrations) up to 84 days. Both perturbations increased microbial N (+59.6 \u00b5g g\u22121 dw) and decreased dissolved N (\u221240.3 \u00b5g g\u22121 dw) after 160 days, and significantly altered C/N ratios in microbial and dissolved pools (particularly in the first 6 days of the experiment).<br/><br/>Our results demonstrate that single-pulse perturbations can have long-term legacies in soil microbial ecosystems. In our experiment they led to alternative system states which differed from the unperturbed control in multiple parameters even after 160 days. This indicates that soil microbial communities exhibit a low resistance and resilience towards single-pulse perturbations, and may easily be pushed on alternative trajectories by short but strong environmental pulses.", "keywords": ["0301 basic medicine", "2. Zero hunger", "106022 Mikrobiologie", "0303 health sciences", "Resilience", "04 agricultural and veterinary sciences", "15. Life on land", "Perturbations", "6. Clean water", "Transient state", "Pulse event", "03 medical and health sciences", "106026 \u00d6kosystemforschung", "13. Climate action", "Soil microbial community", "106022 Microbiology", "0401 agriculture", " forestry", " and fisheries", "106026 Ecosystem research"]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2023.116399"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2023.116399", "name": "item", "description": "10.1016/j.geoderma.2023.116399", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2023.116399"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-04-01T00:00:00Z"}}, {"id": "10.1007/s13593-011-0079-0", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:15:29Z", "type": "Journal Article", "created": "2012-01-10", "title": "Fifteen Years Of No Till Increase Soil Organic Matter, Microbial Biomass And Arthropod Diversity In Cover Crop-Based Arable Cropping Systems", "description": "The physical, chemical and biological properties of soil may be modified by tillage, fertilization and cover crops. However there is little knowledge on long-term effects on soil properties, notably under Mediterranean climate. Moreover, biological indicators such as micro-arthropods can be used for a cost-effective analysis of soil biodiversity. Here, we studied physical and biological properties of a sandy loam soil in central Italy under a 4-year rotation of maize\u2013durum wheat\u2013cover crop\u2013sunflower\u2013durum wheat\u2013cover crop during 15\u00a0years. We analysed the effects of two tillage systems, conventional tillage (CT) and no-tillage (NT); two N fertilization rates, without N and medium N level; and three soil covers: cash crop residue as control, Brassica juncea and Vicia villosa. Results show that no tillage increased soil organic matter content in the upper 10-cm layer (3.31%) compared to the conventional tillage (2.19%). No tillage also improved structure stability and lowered bulk density in the same soil profile. No-tillage systems showed higher soil microbial biomass (+71%) and respiration (+44%), and a higher abundance and diversity of micro-arthropods. We conclude that no tillage is an effective measure to improve the physical and biological quality of soil in Mediterranean conditions. No-tillage positive effect can be enhanced by the right choice of N fertilization and cover crop cultivation. Bio-indicators such as micro-arthropods can be very predictive of soil habitability by organisms.", "keywords": ["2. Zero hunger", "[SDV.SA] Life Sciences [q-bio]/Agricultural sciences", "[SDV.EE] Life Sciences [q-bio]/Ecology", " environment", "13. Climate action", "Aggregate stability", " Micro-arthropod diversity", " Microbial biomass carbon", " Soil biological quality", " Soil organic matter", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water"]}, "links": [{"href": "https://www.iris.sssup.it/bitstream/11382/338182/2/Sapkota%20et%20al.%20%282012%29_ASDE.pdf"}, {"href": "https://doi.org/10.1007/s13593-011-0079-0"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agronomy%20for%20Sustainable%20Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s13593-011-0079-0", "name": "item", "description": "10.1007/s13593-011-0079-0", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s13593-011-0079-0"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-01-11T00:00:00Z"}}, {"id": "10.1007/s42729-020-00317-8", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:15:32Z", "type": "Journal Article", "created": "2020-08-12", "title": "Relationship Between Soil Properties and Banana Productivity in the Two Main Cultivation Areas in Venezuela", "description": "Open AccessTo identify the main edaphic variables most correlated to banana productivity in Venezuela and explore the development of an empirical correlation model to predict this productivity based on soil characteristics. Six agricultural fields located in two of the main banana production areas of Venezuela were selected. The experimental sites were in large farms (\u2265\u200950 ha) with four productivity levels in \u201cGran Nain\u201d bananas, with an area of 4 ha for each of four productive levels: High - High, High - Low, Low - High, and Low - Low. Sixty sampling points were used to characterize the soils under study. Additionally, a Productivity Index (PI) based on three different biometric data on plant productivity was proposed. Through hierarchical statistical analysis, the first 16 soil variables that best explained the PI were selected. Thus, five multiple linear regression models were estimated, using the stepwise regression method. Subsequently, a performance analysis was used to compare the prediction quality range and the error associated with the number of soil variables selected for the proposed models. The selected model included the following soil variables: Mg, penetration resistance, total microbial respiration, bulk density, and omnivorous free-living nematodes. These variables explain the PI with an R2 of 0.55, the mean absolute error (MAE) of 0.8, and the root of the mean squared error (RMSE) of 1.0. The five selected variables are proposed to characterize the soil Productivity Index in banana and could be used in a site-specific soil management program for the banana areas of Venezuela.", "keywords": ["0106 biological sciences", "2. Zero hunger", "Penetration resistance", "Musaceae", "BULK DENSITY", "SOIL QUALITY", "Total microbial respiration", "04 agricultural and veterinary sciences", "15. Life on land", "TOTAL MICROBIAL RESPIRATION", "01 natural sciences", "Bulk density", "Soil quality", "FREE-LIVING NEMATODES", "MUSACEAE", "https://purl.org/becyt/ford/4.1", "0401 agriculture", " forestry", " and fisheries", "https://purl.org/becyt/ford/4", "Free-living nematodes", "PENETRATION RESISTANCE"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s42729-020-00317-8.pdf"}, {"href": "https://doi.org/10.1007/s42729-020-00317-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Soil%20Science%20and%20Plant%20Nutrition", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s42729-020-00317-8", "name": "item", "description": "10.1007/s42729-020-00317-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s42729-020-00317-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-08-12T00:00:00Z"}}, {"id": "10.1016/j.agee.2010.12.011", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:15:43Z", "type": "Journal Article", "created": "2010-12-31", "title": "Impact On Soil Quality Of A 10-Year-Old Short-Rotation Coppice Poplar Stand Compared With Intensive Agricultural And Uncultivated Systems In A Mediterranean Area", "description": "Bioenergy crops play an ecologically and economically fundamental role as an alternative to agri-food productions and as renewable energy sources. Little attention has been focused on soil quality following conversion of agricultural lands to biomass crops. Here, we assessed the impact of a 10-year-old short-rotation coppice (SRC) poplar stand on the main soil chemical parameters, microbial biomass carbon, soil respiration, and arbuscular mycorrhizal fungi (AMF), compared with intensive agricultural and uncultivated systems. Three different harvest frequencies of poplar SRC (annual T1, biannual T2 and triennial T3 cutting cycles) were evaluated. Multivariate analysis showed that poplar SRC improved soil quality compared with intensive agricultural and uncultivated systems. T1 and T2 positively affected AMF inoculum potential and root colonisation of a co-occurring plant species, while T3 improved the majority of soil chemical and biochemical parameters. Moreover, three different AMF morphospecies belonging to the genera Glomus and Scutellospora were found in poplar SRC, while morphospecies belonging exclusively to genera Glomus were recorded in intensive agricultural and uncultivated systems. Such aspects have agro-ecological implications, since the positive changes of soil nutrient availability and carbon content together with a high abundance and diversity of soil biota show clear soil sustainability of poplar SRC.", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Short-rotation forestry; Cutting cycle; Arbuscular mycorrhizal fungi; Microbial biomass carbon; Soil respiration; Multivariate analysis", "7. Clean energy"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2010.12.011"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2010.12.011", "name": "item", "description": "10.1016/j.agee.2010.12.011", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2010.12.011"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-01-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2014.02.021", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:15:47Z", "type": "Journal Article", "created": "2014-03-15", "title": "Biochar Does Not Affect Soil N-Transformations Or Microbial Community Structure Under Ruminant Urine Patches But Does Alter Relative Proportions Of Nitrogen Cycling Bacteria", "description": "Abstract   Nitrogen (N) cycling, especially denitrification, can be significantly altered when biochar is used as a soil conditioner. These alterations in N-cycling have been attributed to a combination of physicochemical change, alterations in microbial community ecology and pervading climatic conditions. This study investigated seasonal bacterial community change over two years in combination with a short-term winter study of N-transformations under bovine urine patches. A silt-loam pastoral soil in Canterbury, New Zealand was amended with either 0, 15 or 30\u00a0t\u00a0ha \u22121  of  Pinus radiata  biochar (pyrolysed at \u223c450\u00a0\u00b0C) and bovine urine was added to patches within the 0 and 30\u00a0t\u00a0ha \u22121  biochar amended plots (designated as 0\u00a0U and 30\u00a0U treatments, where U indicates \u2018urine\u2019).  No discernible differences in bacterial community structure were observed during the two year study or the short term N-transformation study when comparing non-amended and biochar-amended soil. Differences in bacterial community structure were only evident when comparing seasons, with data pertaining to each season from successive years clustering together. During the short-term N-transformation study, bacterial communities formed 3 distinct clusters corresponding to elevated levels of urine derived NH 4  + -N (days 0\u201310), increases in NO 3  \u2212 -N and N 2 O (days 10\u201322) and a decline in NO 3  \u2212 -N and N 2 O (day 20 onward). Biochar amendment did increase the relative abundance of up to 50% of individual operational taxonomic units (OTUs or \u2018species\u2019), including key nitrite oxidisers and nitrate reducers. Biochar amendment did not affect the concentrations of inorganic-N compounds.  The  nir S (nitrite reductase) gene became elevated in the 30\u00a0U treatment relative to the 0\u00a0U treatment \u223c10 days after the initial urine application. The  nos Z (nitrous oxide reductase) gene became elevated in the 30\u00a0U plots during the latter part of the experiment.  Conclusions:  \u2022   Biochar did not have a significant impact on the microbial community structure in pastoral soil over the course of two years.   \u2022   The relative proportion of nitrifiers and denitrifiers increased in biochar amended soils subjected to large influxes of urine derived N.   \u2022   Differences in N-transformation dynamics in the presence of biochar during the winter months were not statistically significant.", "keywords": ["2. Zero hunger", "N\u2082O emissions", "570", "denitrification", "bovine urine", "silt-loam soil", "ANZSRC::30 Agricultural", "04 agricultural and veterinary sciences", "15. Life on land", "soil microbial ecology", "winter", "nitrification", "630", "6. Clean water", "veterinary and food sciences", "T-RFLP", "new generation sequencing", "13. Climate action", "ANZSRC::41 Environmental sciences", "XXXXXX - Unknown", "0401 agriculture", " forestry", " and fisheries", "biochar", "ANZSRC::44 Human society"], "contacts": [{"organization": "Timothy J. Clough, Kelly Hamonts, Leo M. Condron, Craig Anderson, Craig Anderson,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2014.02.021"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2014.02.021", "name": "item", "description": "10.1016/j.agee.2014.02.021", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2014.02.021"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-06-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2016.05.032", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:15:50Z", "type": "Journal Article", "created": "2016-06-14", "title": "Responses Of Soil Properties And Crop Yields To Different Inorganic And Organic Amendments In A Swiss Conventional Farming System", "description": "AbstractIn agro-ecosystems, fertilization practices are crucial for sustaining crop productivity. Here, based on a 50-year long-term experiment, we studied the influence of fertilization practices (inorganic and/or organic) and nitrogen (N) application rates on (i) soil physicochemical properties, (ii) microbial and earthworm communities and (iii) crop production. Our results showed that soil organic carbon content was increased by incorporation of crop residues (+2.45%) and farmyard manure application (+6.40%) in comparison to the use of mineral fertilizer alone. In contrast, soil carbon stock was not significantly affected by these fertilization practices. Overall, only farmyard manure application improved soil physicochemical properties compared to mineral fertilization alone. Soil microbial population was enhanced by the application of organic amendments as indicated by microbial biomass and phospholipid-derived fatty acids contents. The fertilization practices and the N application rates affected significantly both the biomass and composition of earthworm populations, especially the epigeic and endogeic species. Finally, farmyard manure application significantly increased crop yield (+3.5%) in comparison to mineral fertilization alone. Crop residue incorporation rendered variable but similar crop yields over the 50-year period. The results of this long-term experiment indicate that the use of organic amendments not only reduces the need for higher amount of mineral N fertilizer but also improves the soil biological properties with direct effects on crop yield.", "keywords": ["Cattle farmyard manure", " Crop residues", " N fertilization", " Microbial community", " Earthworms", "2. Zero hunger", "Cattle farmyard manure", "Crop residues", "Ecology", "04 agricultural and veterinary sciences", "15. Life on land", "N fertilization", "01 natural sciences", "Environmental Sciences related to Agriculture and Land-use", "13. Climate action", "Milj\u00f6- och naturv\u00e5rdsvetenskap", "Microbial community", "Earthworms", "0401 agriculture", " forestry", " and fisheries", "Animal Science and Zoology", "Agronomy and Crop Science", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2016.05.032"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2016.05.032", "name": "item", "description": "10.1016/j.agee.2016.05.032", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2016.05.032"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-08-01T00:00:00Z"}}, {"id": "10.1016/j.agrformet.2015.03.013", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:15:55Z", "type": "Journal Article", "created": "2015-04-09", "title": "Effects Of Experimental Warming And Nitrogen Addition On Soil Respiration And Ch4 Fluxes From Crop Rotations Of Winter Wheat-Soybean/Fallow", "description": "Soil respiration and CH4 emissions play a significant role in the global carbon balance. However, in situ studies in agricultural soils on responses of soil respiration and CH4 fluxes to climate warming are still sparse, especially from long-term studies with year-round heating. A warming experiment was conducted at Luancheng research station in the North China Plain from 2008 to 2013. Two levels of temperature (T: increase on average 1.5 degrees C at 5 cm soil depth by infrared heaters, C: ambient temperature) were combined with two levels of nitrogen (N) treatments (N1: with 315 kg N ha(-1) y(-1), NO: no nitrogen input) in the farmland.Soil was found to be a sink for CH4 with no marked seasonal variations. In the wheat-growing season, warming and N input both decreased cumulative CH4 uptake, probably because warming-induced soil drying in N1 treatment reduced (or limited) methanotroph activity by affecting soil NH4 concentration. Across years, CH4 emissions were negatively correlated with soil temperature in Ni treatment. Soil respiration showed clear seasonal fluctuations, with the largest emissions during summer and smallest in winter. Warming and nitrogen fertilization had no significant effects on total cumulative soil CO2 fluxes. Soil respiration was positively correlated with microbial biomass C, and microbial biomass C was not affected significantly by warming or nitrogen addition. The lack of significant effects of warming on soil respiration may have resulted from: (1) warming-induced soil drying offsetting the effects of soil temperature; or (2) adaption of soil respiration to increased temperature. (C) 2015 Published by Elsevier B.V.", "keywords": ["wheat-soybean-fallow", "2. Zero hunger", "Nitrogen fertilization", "CH4", "13. Climate action", "soil warming", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "soil respiration", "soil microbial biomass", "3. Good health"]}, "links": [{"href": "https://doi.org/10.1016/j.agrformet.2015.03.013"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Forest%20Meteorology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agrformet.2015.03.013", "name": "item", "description": "10.1016/j.agrformet.2015.03.013", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agrformet.2015.03.013"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-07-01T00:00:00Z"}}, {"id": "10.1016/j.apsoil.2014.04.003", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:07Z", "type": "Journal Article", "created": "2014-05-08", "title": "Design Of Riparian Buffer Strips Affects Soil Quality Parameters", "description": "Abstract   Vegetated buffer strips alongside watercourses are commonly used to counteract diffuse pollution from agricultural activities. If properly designed, they can provide multiple environmental benefits by increasing wildlife habitats and biodiversity. Little attention has been paid to the effects of buffer strips on soil quality. This study was conducted to determine the impact of different buffer designs on soil biochemical parameters and to define relevant quality parameters for soil monitoring. We compared four buffer arrangements: 3\u00a0m wide grass buffer; 3\u00a0m grass with one tree row; 6\u00a0m grass with one tree row; 6\u00a0m grass with two tree rows; plus two controls: an adjacent maize crop field and a plot without buffer. Buffers were established 13 years ago at the Padua University Experimental Farm in the Po Valley, north-east Italy. Studied parameters included soil organic matter composition and soil microbial and enzymatic assays. As expected, control plots showed the lowest values for all the studied parameters. Among buffer designs, 3\u00a0m grass and 3\u00a0m grass with 1 tree row buffers gave the highest values. Multivariate analysis demonstrated that the increase of soil organic carbon content distinguished buffers from controls, whereas soil humic carbon quality parameters such as humic compounds apparent molecular weight, together with acetyl esterase (fluorescein test) enzyme activity, were discriminatory in separating buffer designs. These results are an important contribution to the knowledge base and can help to improve the management of these systems.", "keywords": ["2. Zero hunger", "soil organic matter; buffer strip; Microbial biomass; Humic substances", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.apsoil.2014.04.003"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Soil%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.apsoil.2014.04.003", "name": "item", "description": "10.1016/j.apsoil.2014.04.003", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.apsoil.2014.04.003"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-08-01T00:00:00Z"}}, {"id": "10.1016/j.apsoil.2016.08.008", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:08Z", "type": "Journal Article", "created": "2016-08-17", "title": "Opposing Effects Of Nitrogen And Water Addition On Soil Bacterial And Fungal Communities In The Inner Mongolia Steppe: A Field Experiment", "description": "Grasslands are important ecosystems and make up 40% of the terrestrial ecosystems worldwide. The Inner Mongolia steppe is the main grassland region of China, and nitrogen (N) and water availability are two important factors that limit the productivity of these grasslands. We tested how N and water addition influence the composition of the microbial community in the soil using PLFA, and soil physical and chemical properties in two semiarid grassland sites in Inner Mongolia during two consecutive years. In both sites, a split-plot design was employed with two water treatments (natural precipitation, stimulated wet year precipitation) and three N treatments (0 kg N ha\u22121, 25 kg N ha\u22121, 50 kg N ha\u22121). Water addition greatly increased soil fungi and decreased bacteria while N had opposite effects. Water addition resulted in a significant increase in soil pH and electric conductivity. N addition did not lead to consistent changes in soil characteristics. Multivariate analysis showed that PLFA composition varied between all treatments but was mainly influenced by water addition. This study provides insight into how climatic changes such as alternations in rainfall and N deposition shape the soil microbial communities in Inner Mongolia steppes.", "keywords": ["2. Zero hunger", "Steppe", "13. Climate action", "Fertilization", "international", "PLFA", "Soil microbial community", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Irrigation", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.apsoil.2016.08.008"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Soil%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.apsoil.2016.08.008", "name": "item", "description": "10.1016/j.apsoil.2016.08.008", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.apsoil.2016.08.008"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-12-01T00:00:00Z"}}, {"id": "10.1186/s40168-021-01144-4", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:43Z", "type": "Journal Article", "created": "2021-09-20", "title": "Trophic level drives the host microbiome of soil invertebrates at a continental scale", "description": "Abstract                 Background                 <p>Increasing our knowledge of soil biodiversity is fundamental to forecast changes in ecosystem functions under global change scenarios. All multicellular organisms are now known to be holobionts, containing large assemblages of microbial species. Soil fauna is now known to have thousands of species living within them. However, we know very little about the identity and function of host microbiome in contrasting soil faunal groups, across different terrestrial biomes, or at a large spatial scale. Here, we examined the microbiomes of multiple functionally important soil fauna in contrasting terrestrial ecosystems across China.</p>                                Results                 <p>Different soil fauna had diverse and unique microbiomes, which were also distinct from those in surrounding soils. These unique microbiomes were maintained within taxa across diverse sampling sites and in contrasting terrestrial ecosystems. The microbiomes of nematodes, potworms, and earthworms were more difficult to predict using environmental data, compared to those of collembolans, oribatid mites, and predatory mites. Although stochastic processes were important, deterministic processes, such as host selection, also contributed to the assembly of unique microbiota in each taxon of soil fauna. Microbial biodiversity, unique microbial taxa, and microbial dark matter (defined as unidentified microbial taxa) all increased with trophic levels within the soil food web.</p>                                Conclusions                 <p>Our findings demonstrate that soil animals are important as repositories of microbial biodiversity, and those at the top of the food web harbor more diverse and unique microbiomes. This hidden source of biodiversity is rarely considered in biodiversity and conservation debates and stresses the importance of preserving key soil invertebrates.</p>", "keywords": ["0301 basic medicine", "0303 health sciences", "Microbial dark matter", "Trophic dynamics", "Research", "Microbiota", "QR100-130", "Biodiversity", "15. Life on land", "Microbiology", "Invertebrates", "Microbial ecology", "Soil", "03 medical and health sciences", "Soil food web", "13. Climate action", "XXXXXX - Unknown", "Host microbiome", "Animals", "Network analysis", "Continental-scale survey", "Deterministic process", "Unique microbial taxa", "Ecosystem", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1186/s40168-021-01144-4"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Microbiome", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1186/s40168-021-01144-4", "name": "item", "description": "10.1186/s40168-021-01144-4", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1186/s40168-021-01144-4"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-20T00:00:00Z"}}, {"id": "10.1016/j.apsoil.2017.09.009", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-03T16:16:09Z", "type": "Journal Article", "created": "2017-09-26", "title": "Soil Microbial Communities Under Cacao Agroforestry And Cover Crop Systems In Peru", "description": "Abstract   Cacao (Theobroma cacao) trees are grown in tropical regions worldwide for chocolate production. We studied the effects of agroforestry management systems and cover cropping on soil microbial communities under cacao in two different replicated field experiments in Peru. In the first experiment, two agroforestry systems, Improved Traditional Agroforestry System (ITAS) and Improved Natural Agroforestry System (INAS), were compared. ITAS was a \u2018slash and burn\u2019 system in which all native vegetation was removed prior to replanting with cacao and other trees while INAS used selective removal of uneconomical trees followed by cacao planting. Soil microbial communities were analyzed by phospholipid fatty acid (PLFA) analysis and terminal restriction fragment length polymorphism (TRFLP) analysis. Soils in the ITAS system had altered microbial community structure and a lower Gram-negative to Gram-positive ratio when compared to soils in the INAS system. However, soil microbial community structure was also affected by a large soil pH gradient (three pH units) across this experiment. In the cover crop experiment, five cover crops, Arachis pintoi (perennial peanut), Calopogonium mucunoides (calopo), Canavalia ensiformis (jackbean), Centrosema macrocarpum (centro), and Callisia repens (callisia), and two controls (one with and one without nitrogen fertilization), were compared. Cover cropping with centro or perennial peanut increased the Gram-negative to Gram-positive ratio, while centro reduced the fungal biomass. Microbial community structure was significantly affected by cover cropping. Our results indicate that management systems and cover cropping can affect soil microbial community structure in tropical agroforestry systems, but the effects of soil edaphic properties must be considered as well.", "keywords": ["2. Zero hunger", "Cacao", "Soil microbial community", "PLFA", "TRFLP", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water"], "contacts": [{"organization": "USDA, ARS, BARC, Sustainable Agricultural Systems Laboratory, Beltsville, MD, USA ( host institution ), Buyer, Jeffrey S. ( author ), Baligar, Virupax C. ( author ), He, Zhenli ( UF author ), Ar\u00e9valo-Gardini, Enrique ( author ),", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.apsoil.2017.09.009"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Soil%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.apsoil.2017.09.009", "name": "item", "description": "10.1016/j.apsoil.2017.09.009", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.apsoil.2017.09.009"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-11-01T00:00:00Z"}}, {"id": "10.1016/j.ijheh.2019.01.004", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:17:07Z", "type": "Journal Article", "created": "2019-02-06", "title": "The impact of on-site hospital wastewater treatment on the downstream communal wastewater system in terms of antibiotics and antibiotic resistance genes", "description": "This study quantified antibiotic and antibiotic resistance gene (ARG) concentrations in hospital and communal wastewaters as well as the influents and effluents of the receiving urban wastewater treatment plants (UWWTP) in two Dutch cities. In only one city, hospital wastewater was treated on-site using advanced technologies, including membrane bioreactor treatment (MBR), ozonation, granulated activated carbon (GAC) and UV-treatment. On-site hospital wastewater (HWW) treatment reduced gene presence of hospital-related antibiotic resistance genes and antibiotic concentrations in the receiving urban wastewater treatment plant. These findings support the need for on-site treatment of high-risk point sources of antibiotic resistance genes. 13 antibiotic resistance genes, Integrase Class 1 and 16S rRNA concentrations were quantified using multiplex quantitative real-time PCR (qPCR) assays and the presence and/or concentration of 711 antibiotics were analyzed. Hospital wastewater contained approximately 25% more antibiotics and gene concentrations between 0.4 log to 1.8-fold higher than communal wastewater (CWW). blaKPC and vanA could be identified as hospital-related genes and were reduced to under the limit of detection (LOD) during on-site treatment. Advanced on-site treatment removed between 0.5 and 3.6-fold more genes than conventional biological urban wastewater treatment (activated sludge). Advanced on-site treatment was able to eliminate 12 out of 19 detected antibiotics, while urban waste water treatment eliminated up to 1 (out of 21 detected). Different advanced treatment technologies were able to target different pollutants to varying extents, making sequential alignment more effective. MBR treatment was most efficient in antibiotic resistance gene reduction and ozonation in antibiotic reduction. blaKPC could only be detected in the influent of the urban wastewater treatment plant receiving untreated hospital wastewater. Similarly, vanA was only consistently detected in this treatment plant. These results indicate a positive effect of on-site treatment of hospital wastewater on the communal sewage system.", "keywords": ["0301 basic medicine", "0303 health sciences", "Drug Resistance", " Microbial", "Wastewater", "Waste Disposal", " Fluid", "Hospitals", "6. Clean water", "Anti-Bacterial Agents", "12. Responsible consumption", "3. Good health", "03 medical and health sciences", "Genes", " Bacterial", "13. Climate action", "11. Sustainability", "Water Pollutants", "Advanced wastewater treatment Contaminants of emerging concern Pharmafilter Antibiotic resistance"]}, "links": [{"href": "https://doi.org/10.1016/j.ijheh.2019.01.004"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/International%20Journal%20of%20Hygiene%20and%20Environmental%20Health", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ijheh.2019.01.004", "name": "item", "description": "10.1016/j.ijheh.2019.01.004", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ijheh.2019.01.004"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-05-01T00:00:00Z"}}, {"id": "10.1016/j.biortech.2019.122728", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:16Z", "type": "Journal Article", "created": "2020-01-02", "title": "Effects of copper salts on performance, antibiotic resistance genes, and microbial community during thermophilic anaerobic digestion of swine manure", "description": "This study investigated methane production and ARGs reduction during thermophilic AD of swine manure with the addition of different Cu salts (cupric sulfate, cupric glycinate, and the 1:1 mixture of these two salts). Results showed methane production was increased by 28.78% through adding mixed Cu salts. The mixed Cu group effectively reduced total ARGs abundance by 26.94%, suggesting mixed Cu salts did not promote the potential ARGs risk. The positive effects of mixed Cu salts on AD performance and ARGs removal might be ascribed to the low bioavailability. Microbial community analysis indicated the highest abundances of Clostridia_MBA03 and Methanobacterium in the mixed Cu group might cause the increased methane production. Spearman's rank correlation analysis elucidated the succession in microbial community induced by environmental factors was the main driver for shaping ARGs profiles. Thus, mixed Cu salts could be an alternative to replace the inorganic Cu salt in animal feed additives.", "keywords": ["Manure", "Genes", " Bacterial", "Swine", "Microbiota", "Animals", "Drug Resistance", " Microbial", "Anaerobiosis", "01 natural sciences", "Copper", "6. Clean water", "Anti-Bacterial Agents", "0105 earth and related environmental sciences"], "contacts": [{"organization": "Wu, Xiayuan, Tian, Zhenzhen, Lv, Zuopeng, Chen, Zixuan, Liu, Yongdi, Yong, Xiaoyu, Zhou, Jun, Xie, Xinxin, Jia, Honghua, Wei, Ping,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.biortech.2019.122728"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bioresource%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.biortech.2019.122728", "name": "item", "description": "10.1016/j.biortech.2019.122728", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.biortech.2019.122728"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-01T00:00:00Z"}}, {"id": "10.1016/j.catena.2016.12.013", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:20Z", "type": "Journal Article", "created": "2016-12-29", "title": "Manure Fertilization Increases Soil Respiration And Creates A Negative Carbon Budget In A Mediterranean Maize (Zea Mays L.)-Based Cropping System", "description": "Abstract   Agronomic research is important to identify suitable options for improving soil carbon (C) sequestration and reducing soil CO2 emissions. Therefore, the objectives of this study were i) to analyse the on-farm effects of different nitrogen fertilization sources on soil respiration, ii) to explore the effect of fertilization on soil respiration sensitivity to soil temperature (T) and iii) to assess the effect of the different fertilization regimes on the soil C balance. We hypothesized that i) the soil CO2 emission dynamics in Mediterranean irrigated cropping systems were mainly affected by fertilization management and T and ii) fertilization affected the soil C budget via different C inputs and CO2 efflux. Four fertilization systems (farmyard manure, cattle slurry, cattle slurry\u00a0+\u00a0mineral, and mineral) were compared in a double-crop rotation based on silage maize (Zea mays L.) and a mixture of Italian ryegrass (Lolium multiflorum Lam.) and oats (Avena sativa L.). The research was performed in the dairy district of Arborea, in the coastal zone of Sardinia (Italy), from May 2011 to May 2012. The soil was a Psammentic Palexeralfs with a sandy texture (940\u00a0g\u00a0sand\u00a0kg\u2212\u00a01). The soil total respiration (SR), heterotrophic respiration (Rh), T and soil water content (SWC) were simultaneously measured in situ. The soil C balance was computed considering the Rh C losses and the soil C inputs from fertilizer and crop residues. The results showed that the maximum soil CO2 emission rates soon after the application of organic fertilizer reached values up to 12\u00a0\u03bcmol\u00a0m\u2212\u00a02\u00a0s\u2212\u00a01. On average, the manure fertilizer showed significantly higher CO2 emissions, which resulted in a negative annual C balance (\u2212\u00a02.9\u00a0t\u00a0ha\u2212\u00a01). T also affected the soil respiration temporal dynamics during the summer, consistently with results obtained in other temperate climatic regions that are characterized by wet summers and contrary to results from rainfed Mediterranean systems where the summer SR and Rh are constrained by the low SWC. The sensitivity of soil respiration to temperature significantly increased with C input from fertilizer. In conclusion, this research supported the hypotheses tested. Furthermore, the results indicated that i) soil CO2 efflux was significantly affected by fertilization management and T, and ii) fertilization with manure increased the soil respiration and resulted in a significantly negative soil C budget. This latter finding could be primarily explained by a reduction in productivity and, consequently, in crop residue with organic fertilization alone as compared to mineral, by the favourable SWC and T for mineralization, and by the sandy soil texture, which hindered the formation of macroaggregates and hence soil C stabilization, making fertilizer organic inputs highly susceptible to mineralization.", "keywords": ["2. Zero hunger", "13. Climate action", "Biomass C turnover GHG emission Microbial activity Soil moisture", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "12. Responsible consumption"]}, "links": [{"href": "https://doi.org/10.1016/j.catena.2016.12.013"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/CATENA", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.catena.2016.12.013", "name": "item", "description": "10.1016/j.catena.2016.12.013", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.catena.2016.12.013"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-04-01T00:00:00Z"}}, {"id": "10.1016/j.ecolmodel.2023.110507", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:31Z", "type": "Journal Article", "created": "2023-10-10", "title": "Interactive effects of microbial functional diversity and carbon availability on decomposition \u2013 A theoretical exploration", "description": "<div><p>Microbial functional diversity in litter and soil has been hypothesized to affect the rate of decomposition of organic matter and other soil ecosystem functions. However, there are no clear theoretical expectations on how these effects might change with substrate availability, heterogeneity in the substrate chemistry, and different aspects of functional diversity itself (number of microbial groups vs. distribution of functional traits). To explore how these factors shape the decomposition-diversity relation, we carry out numerical experiments using a flexible reaction network comprising microbial processes and interactions with bioavailable carbon (extracellular degradation, uptake, respiration, growth, and mortality), and ecological processes (competition among the different groups). We also considered diverse carbon substrates, in terms of varying nominal oxidation state of carbon (NOSC). The reaction network was used to test the effects of (i) number of microbial groups, (ii) number of carbon pools, (iii) microbial functional diversity, and (iv) amount of bioavailable carbon. We found that the decomposition rate constant increases with increasing substrate concentration and heterogeneity, as well as with increasing microbial functional diversity or variance of microbial traits, albeit these biological factors are less important. The multivariate dependence of the decomposition rate constant (and other decomposition and microbial growth metrics) on substrate and microbial factors can be described using power laws with exponents lower than one, indicating that diversity effects on decomposition and microbial growth are reduced at high substrate concentration and heterogeneity, or at high microbial diversity.</p></div>", "keywords": ["Microbial model Organic matter decomposition Organic carbon oxidation state Decomposition kinetics Microbial diversity", "[SDE] Environmental Sciences", "2. Zero hunger", "Organic matter decomposition", "Supplementary Information", "GE", "Ecology", "330", "GF Human ecology. Anthropogeography", "15. Life on land", "ta4112", "GF", "6. Clean water", "12. Responsible consumption", "Ecological Modelling", "Decomposition kinetics", "13. Climate action", "Microbial functional trait", "Microbial diversity-function relation", "Microbial model", "GE Environmental Sciences", "Organic carbon oxidation state"]}, "links": [{"href": "https://doi.org/10.1016/j.ecolmodel.2023.110507"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Modelling", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ecolmodel.2023.110507", "name": "item", "description": "10.1016/j.ecolmodel.2023.110507", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ecolmodel.2023.110507"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-12-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2022.156952", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:17:32Z", "type": "Journal Article", "created": "2022-06-22", "title": "Integrated organic and inorganic fertilization and reduced irrigation altered prokaryotic microbial community and diversity in different compartments of wheat root zone contributing to improved nitrogen uptake and wheat yield", "description": "Open AccessThe effect of long-term water and integrated fertilization on prokaryotic microorganisms and their regulation for crop nutrient uptake remains unknown. Therefore, the impact of soil water and integrated fertilization after eight years on prokaryotic microbial communities in different compartments of root zone and their association with wheat nitrogen (N) absorption and yield were investigated. The results showed that compared with fertilization treatments (F), water regimes (W) more drastically modulated the prokaryotic microbial community structure and diversity in bulk soil, rhizosphere and endosphere. The increase of irrigation improved the prokaryotic diversity in the rhizosphere and endosphere while decreased the diversity in the bulk soil. Application of organic fertilizers significantly improved soil organic matter (SOM) and nutrient contents, increased rhizosphere and endophytic prokaryotic microbial diversity, and elevated the relative abundance of aerobic ammonia oxidation and nitrification-related functional microorganisms in rhizosphere and endosphere. Increasing irrigation elevated the relative abundance of functional microorganisms related to aerobic ammonia oxidation and nitrification in the rhizosphere and endosphere. Soil water content (SWC) and NH4+-N as well as NO3\u2212-N were key predictors of prokaryotic microbial community composition under W and F treatments, respectively. Appropriate application of irrigation and organic fertilizers increased the relative abundance of some beneficial bacteria such as Flavobacterium. Water and fertilization treatments regulated the prokaryotic microbial communities of bulk soil, rhizosphere and endosphere by altering SWC and SOM, and provided evidence for the modulation of prokaryotic microorganisms to promote nitrogen uptake and wheat yield under long-term irrigation and fertilization. Conclusively, the addition of organic manure (50 %) with inorganic fertilizers (50 %) and reduced amount of irrigation (pre-sowing and jointing-period irrigation) decreased the application amount of chemical fertilizers and water, while increased SOM and nutrient content, improved prokaryotic diversity, and changed prokaryotic microbial community structure in the wheat root zone, resulting in enhanced nutrient uptake and wheat yield.", "keywords": ["0106 biological sciences", "Yield", "Microorganism", "Microbial population biology", "Nitrogen", "Soil Science", "Organic chemistry", "Plant Science", "01 natural sciences", "Environmental science", "Agricultural and Biological Sciences", "Soil", "Symbiotic Nitrogen Fixation in Legumes", "Soil water", "Genetics", "Fertilizers", "Biology", "Irrigation", "Soil Microbiology", "Triticum", "2. Zero hunger", "Soil organic matter", "Soil Fertility", "Physicochemical factors", "Ecology", "Bacteria", "Microbiota", "Marine Microbial Diversity and Biogeography", "Water", "Life Sciences", "04 agricultural and veterinary sciences", "15. Life on land", "Nitrification", "Agronomy", "6. Clean water", "Chemistry", "Human fertilization", "13. Climate action", "Fertilization", "FOS: Biological sciences", "Environmental Science", "Physical Sciences", "Rhizosphere", "Bulk soil", "0401 agriculture", " forestry", " and fisheries", "Prokaryotic microorganisms", "Endosphere", "Soil Carbon Dynamics and Nutrient Cycling in Ecosystems", "Nutrient"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2022.156952"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2022.156952", "name": "item", "description": "10.1016/j.scitotenv.2022.156952", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2022.156952"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-10-01T00:00:00Z"}}, {"id": "10.1016/j.ejsobi.2013.10.007", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:35Z", "type": "Journal Article", "created": "2013-11-02", "title": "Effect Of Biochar Addition On Soil Microbial Community In A Wheat Crop", "description": "Biochar is known to enhance soil fertility and C sequestration, but relatively little information is currently available about its effect on soil microbial community, a component of terrestrial ecosystems that plays a key role in nutrient cycling. This study tested the effects of soil amendment with two loads of wood-derived biochar (30 and 60 t ha(-1)) in a wheat crop in Tuscany (Italy). Soil samples were collected 3 and 14 months after treatments over two successive growing seasons, and analysed for pH, total organic C (C-org), extractable C (C-ext), microbial biomass-C (C-mic), 25 specific microbial activities, mean substrate-induced respiration (mSIR) for 25 substrates, functional microbial diversity and bacterial genetic diversity. No significant effect of biochar treatment was observed on C-org, C-ext, C-mic, microbial quotient (C-mic % C-org) or genetic diversity. An increase in mSIR, some specific microbial activities and soil pH, and a significant change in functional diversity were observed 3 months after treatment. In contrast, no effect of biochar was detected 14 months after treatment for the parameters considered, except for a small but significant increase in pH. Our data suggest that biochar addition stimulated soil microbial activity without causing any apparent disturbance, but this positive effect was very short-lived. (C) 2013 Published by Elsevier Masson SAS.", "keywords": ["2. Zero hunger", "Soil management", "Wood-derived biochar", "Soil bacterial diversity; Soil management; Soil microbial activity; Soil microbial functional diversity; Wheat crop; Wood-derived biochar;", "Soil microbial functional diversity", "Wheat crop", "Soil microbial activity", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "Soil bacterial diversity", "15. Life on land", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.ejsobi.2013.10.007"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/European%20Journal%20of%20Soil%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ejsobi.2013.10.007", "name": "item", "description": "10.1016/j.ejsobi.2013.10.007", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ejsobi.2013.10.007"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-01-01T00:00:00Z"}}, {"id": "10.1016/j.electacta.2021.138636", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:37Z", "type": "Journal Article", "created": "2021-05-22", "title": "Simultaneous removal of hydrocarbons and sulfate from groundwater using a \u201cbioelectric well\u201d", "description": "Abstract   Petroleum hydrocarbons (PHs) are often found in groundwater due to human activities like accidental spills, causing health and environmental risks, and requiring remediation. Microbial Electrochemical Technologies (METs) have emerged as a promising alternative to conventional bioremediation techniques for the treatment of PH-contaminated groundwater. However, the field-application of these promising sustainable as well as cost-effective technologies is still scarce. One major reason is the lack of scalable reactor configurations. Herein, an upgraded version of the \u201cbioelectric well\u201d, a novel tubular bioelectrochemical reactor that can be installed directly within a groundwater well, was tested for the simultaneous removal of oxidableoxidizable (i.e., toluene and other PH) and reducible (i.e., sulfate) compounds from a real contaminated groundwater.  After a proof-of-concept study in batch mode, the system was operated in continuous-flow mode for 48 days with the anode polarized at 0.2\u00a0V vs. SHE and a hydraulic retention time of 11\u00a0h. In these conditions, a steady-state removal rate of toluene as high as 31\u00a0\u00b1\u00a02\u00a0mg L\u22121 d\u22121 was achieved, which was more than double the value observed with the open circuit potential (OCP) control and one of the highest reported in literature. The electrode polarization went along with a higher abundance of key-functional genes involved in toluene degradation. This was not only showing its clear functional connection to the microbial metabolism, but further allowed to identify the involved electrogenic biodegradation pathway. In addition, the system simultaneously removed sulfate (30\u00a0\u00b1\u00a01\u00a0mg L\u22121 d\u22121), with bacteria likely using the H2 generated at the cathode as electron donor. Nevertheless, the apparent sulfate removal rate in the polarized and in the OCP runs was similar. The analysis of the microbial communities evidenced a high abundance of the genus Chlorobium in the effluent of the polarized run. These microorganisms were probably responsible for the continuous oxidative regeneration of sulfate from the sulfide produced at the cathode by sulfate-reducing bacteria. This phenomenon probably hindered the overall removal of sulfate by the bioelectrochemical system.", "keywords": ["0301 basic medicine", "0303 health sciences", "03 medical and health sciences", "Microbial electrochemical technologies", "Groundwater remediation", "bioremediation; groundwater remediation; microbial electrochemical technologies; petroleum hydrocarbons; toluene", "Petroleum hydrocarbons", "Bioremediation", "6. Clean water", "Toluene"]}, "links": [{"href": "https://doi.org/10.1016/j.electacta.2021.138636"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Electrochimica%20Acta", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.electacta.2021.138636", "name": "item", "description": "10.1016/j.electacta.2021.138636", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.electacta.2021.138636"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-08-01T00:00:00Z"}}, {"id": "10.1016/j.electacta.2020.137568", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:37Z", "type": "Journal Article", "created": "2020-11-30", "title": "Modelling the influence of soil properties on performance and bioremediation ability of a pile of soil microbial fuel cells", "description": "Abstract   Worldwide, intense industrial and agricultural activities pose serious issues of land contamination. Soil microbial fuel cells (SMFCs) have great potential as a low-cost, and self-powered solution to soil bioremediation, compatible with operations in remote areas. In this study, we propose a novel tubular SMFC design, in which a ceramic tube acts as the separator between the air-cathode and the anode, while providing structural support. No oxygen reduction reaction catalyst is used, and to reach depth, several SMFC units are piled together.  To assess the effect of both the system design and soil properties on performance, a mathematical model, calibrated with experimental data, is proposed, which accounts for chemical and (bio)electrochemical reactions, as well as for charge conservation and transport phenomena. The information generated provides useful indications on optimal design and operational conditions for SMFCs and a guide to effective scale-up strategies for their use in bioremediation.", "keywords": ["Soil microbial fuel cell", "/dk/atira/pure/subjectarea/asjc/1500/1500; name=General Chemical Engineering", "13. Climate action", "Soil microbial fuel cell; Bioremediation; Modelling; Hexachlorobenzene", "Hexachlorobenzene", "/dk/atira/pure/subjectarea/asjc/1600/1603; name=Electrochemistry", "01 natural sciences", "7. Clean energy", "Bioremediation", "Modelling", "6. Clean water", "0105 earth and related environmental sciences", "12. Responsible consumption"]}, "links": [{"href": "https://iris.unica.it/bitstream/11584/303841/5/pdf24_merged.pdf"}, {"href": "https://doi.org/10.1016/j.electacta.2020.137568"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Electrochimica%20Acta", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.electacta.2020.137568", "name": "item", "description": "10.1016/j.electacta.2020.137568", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.electacta.2020.137568"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-02-01T00:00:00Z"}}, {"id": "10.1016/j.envint.2019.03.060", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:39Z", "type": "Journal Article", "created": "2019-04-05", "title": "Characterization of wastewater effluents in the Danube River Basin with chemical screening, in vitro bioassays and antibiotic resistant genes analysis", "description": "Averaged 7-day composite effluent wastewater samples from twelve wastewater treatment plants (WWTPs) in nine countries (Romania, Serbia, Hungary, Slovenia, Croatia, Slovakia, Czechia, Austria, Germany) in the Danube River Basin were collected. WWTPs' selection was based on countries' dominant technology and a number of served population with the aim to get a representative holistic view of the pollution status. Samples were analyzed for 2248 chemicals of emerging concern (CECs) by wide-scope target screening employing LC-ESI-QTOF-MS. 280 compounds were detected at least in one sample and quantified. Spatial differences in the concentrations and distribution of the compounds classes were discussed. Additionally, samples were analyzed for the possible agonistic/antagonistic potencies using a panel of in vitro transactivation reporter gene CALUX\u00ae bioassays including ER\u03b1 (estrogenics), anti-AR (anti-androgens), GR (glucocorticoids), anti-PR (anti-progestins), PPAR\u03b1 and PPAR\u03b3 (peroxisome proliferators) and PAH assays. The potency of the wastewater samples to cause oxidative stress and induce xenobiotic metabolism was determined using the Nrf2 and PXR CALUX\u00ae bioassays, respectively. The signals from each of the bioassays were compared with the recently developed effect-based trigger values (EBTs) and thus allowed for allocating the wastewater effluents into four categories based on their measured toxicity, proposing a putative action plan for wastewater operators. Moreover, samples were analyzed for antibiotics and 13 antibiotic-resistant genes (ARGs) and one mobile genetic element (intl1) with the aim to assess the potential for antibiotic resistance. All data collected from these various types of analysis were stored in an on-line database and can be viewed via interactive map at https://norman-data.eu/EWW_DANUBE.", "keywords": ["0211 other engineering and technologies", "500", "Drug Resistance", " Microbial", "02 engineering and technology", "Wide-scope target screening", "Wastewater", "01 natural sciences", "Bioassays", "6. Clean water", "Anti-Bacterial Agents", "Environmental sciences", "Rivers", "13. Climate action", "Emerging substances", "Antibiotic resistant genes", "Effluent wastewater", "GE1-350", "Biological Assay", "Danube River Basin", "Emerging substances Wide-scope target screening Effluent wastewater Bioassays Antibiotic resistant genes Danube River Basin", "Water Pollutants", " Chemical", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envint.2019.03.060"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environment%20International", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envint.2019.03.060", "name": "item", "description": "10.1016/j.envint.2019.03.060", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envint.2019.03.060"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-06-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2018.09.128", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:41Z", "type": "Journal Article", "created": "2018-09-28", "title": "A rationale for the high limits of quantification of antibiotic resistance genes in soil", "description": "The determination of values of abundance of antibiotic resistance genes (ARGs) per mass of soil is extremely useful to assess the potential impacts of relevant sources of antibiotic resistance, such as irrigation with treated wastewater or manure application. Culture-independent methods and, in particular, quantitative PCR (qPCR), have been regarded as suitable approaches for such a purpose. However, it is arguable if these methods are sensitive enough to measure ARGs abundance at levels that may represent a risk for environmental and human health. This study aimed at demonstrating the range of values of ARGs quantification that can be expected based on currently used procedures of DNA extraction and qPCR analyses. The demonstration was based on the use of soil samples spiked with known amounts of wastewater antibiotic resistant bacteria (ARB) (Enterococcus faecalis, Escherichia coli, Acinetobacter johnsonii, or Pseudomonas aeruginosa), harbouring known ARGs, and also on the calculation of expected values determined based on qPCR. The limits of quantification (LOQ) of the ARGs (vanA, qnrS, blaTEM, blaOXA, blaIMP, blaVIM) were observed to be approximately 4 log-units per gram of soil dry weight, irrespective of the type of soil tested. These values were close to the theoretical LOQ values calculated based on currently used DNA extraction methods and qPCR procedures. The observed LOQ values can be considered extremely high to perform an accurate assessment of the impacts of ARGs discharges in soils. A key message is that ARGs accumulation will be noticeable only at very high doses. The assessment of the impacts of ARGs discharges in soils, of associated risks of propagation and potential transmission to humans, must take into consideration this type of evidence, and avoid the simplistic assumption that no detection corresponds to risk absence.", "keywords": ["0301 basic medicine", "2. Zero hunger", "LOD - Limit of detection", "0303 health sciences", "Acinetobacter", "Drug Resistance", " Microbial", "Wastewater", "Real-Time Polymerase Chain Reaction", "6. Clean water", "Anti-Bacterial Agents", "3. Good health", "Manure", "Quantitative PCR", "Soil", "03 medical and health sciences", "Genes", " Bacterial", "13. Climate action", "Pseudomonas aeruginosa", "Enterococcus faecalis", "Escherichia coli", "LOQ - Limit of quantification", "Soil Microbiology", "Risk assessment"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2018.09.128"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2018.09.128", "name": "item", "description": "10.1016/j.envpol.2018.09.128", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2018.09.128"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-12-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2022.120873", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:41Z", "type": "Journal Article", "created": "2022-12-15", "title": "Comparative selective pressure potential of antibiotics in the environment", "description": "To guide both environmental and public health policy, it is important to assess the degree of antibiotic resistance selection pressure under measured environmental concentrations (MECs), and to compare the efficacy of different mitigation strategies to minimize the spread of resistance. To this end, the resistance selection and enrichment potential due to antibiotic emissions into the environment must be analysed from a life cycle perspective, for a wide range of antibiotics, and considering variations in the underlying fitness costs between different resistance mutations and genes. The aim of this study is to consistently derive fitness cost-dependent minimum selective concentrations (MSCs) from readily available bacterial inhibition data and to build MSC-based species sensitivity distributions (SSDs). These are then used to determine antibiotic-specific resistance selection concentrations predicted to promote resistance in 5% of exposed bacterial species (RSC5). Using a previously developed competition model, we provide estimated MSC10 endpoints for 2,984 antibiotic and bacterial species combinations; the largest set of modelled MSCs available to date. Based on constructed SSDs, we derive RSC5 for 128 antibiotics with four orders of magnitude difference in their 'selective pressure potential' in the environment. By comparing our RSC5 to MECs, we highlight specific environmental compartments (e.g. hospital and wastewater effluents, lakes and rivers), as well as several antibiotics (e.g. ciprofloxacin, norfloxacin, enrofloxacin, and tetracycline), to be scrutinized for their potential role in resistance selection and dissemination. In addition to enabling comparative risk screening of the selective pressure potential of multiple antibiotics, our SSD-derived RSC5 provide the point of departure for calculating new life cycle-based characterization factors for antibiotics to compare mitigation strategies, thereby contributing towards a 'One-Health' approach to tackling the global antibiotic resistance crisis.", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Bacteria", "Antibiotic resistance", "Drug Resistance", " Microbial", "Tetracycline", "6. Clean water", "Anti-Bacterial Agents", "3. Good health", "Selection coefficient", "03 medical and health sciences", "Ciprofloxacin", "Species sensitivity distribution", "Fitness cost", "Life cycle impact assessment", "/dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_being; name=SDG 3 - Good Health and Well-being", "Minimum selective concentration", "Norfloxacin"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2022.120873"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2022.120873", "name": "item", "description": "10.1016/j.envpol.2022.120873", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2022.120873"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-02-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2016.01.007", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:40Z", "type": "Journal Article", "created": "2016-01-16", "title": "Effects Of Manure And Mineral Fertilization Strategies On Soil Antibiotic Resistance Gene Levels And Microbial Community In A Paddy-Upland Rotation System", "description": "This work investigated the responses of antibiotic resistance genes (ARGs) and the soil microbial community in a paddy-upland rotation system to mineral fertilizer (NPK) and different application dosages of manure combined with NPK. The occurrence of five tetracycline ARGs (tetA, tetB, tetC, tetG and tetW), two sulfonamide ARGs (sul1 and sul2) and one genetic element (IntI1) was quantified. NPK application showed only slight or no impact on soil ARGs abundances compared with the control without fertilizer. Soil ARGs abundances could be increased by manure-NPK application but was related to manure dosage (2250-9000 kg ha(-1)). Principal component analysis (PCA) showed that the soil ARG profile of the treatment with 9000 kg ha(-1) manure separated clearly from the other treatments; the ARGs that contributed most to the discrimination of this treatment were tetA, tetG, tetW, sul1, sul2 and IntI1. Community level physiological profile (CLPP) analysis showed that increasing manure dosage from 4500 kg ha(-1) to 9000 kg ha(-1) induced a sharp increase in almost all of the detected ARGs but would not change the microbial community at large. However, 9000 kg ha(-1) manure application produced a decline in soil microbial activity. Determination of antibiotics and heavy metals in soils suggested that the observed bloom of soil ARGs might associate closely with the accumulation of copper and zinc in soil.", "keywords": ["2. Zero hunger", "Minerals", "Rotation", "Agriculture", "Drug Resistance", " Microbial", "Oryza", "15. Life on land", "01 natural sciences", "6. Clean water", "Anti-Bacterial Agents", "Manure", "Soil", "Metals", " Heavy", "8. Economic growth", "Fertilizers", "Soil Microbiology", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2016.01.007"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2016.01.007", "name": "item", "description": "10.1016/j.envpol.2016.01.007", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2016.01.007"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-04-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2018.07.006", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:41Z", "type": "Journal Article", "created": "2018-07-03", "title": "Influence of microplastic addition on glyphosate decay and soil microbial activities in Chinese loess soil", "description": "The intensive use of pesticide and plastic mulches has considerably enhanced crop growth and yield. Pesticide residues and plastic debris, however, have caused serious environmental problems. This study investigated the effects of the commonly used herbicide glyphosate and micrometre-sized plastic debris, referred as microplastics, on glyphosate decay and soil microbial activities in Chinese loess soil by a microcosm experiment over 30 days incubation. Results showed that glyphosate decay was gradual and followed a single first-order decay kinetics model. In different treatments (with/without microplastic addition), glyphosate showed similar half-lives (32.8 days). The soil content of aminomethylphosphonic acid (AMPA), the main metabolite of glyphosate, steadily increased without reaching plateau and declining phases throughout the experiment. Soil microbial respiration significantly changed throughout the entirety of the experiment, particularly in the treatments with higher microplastic addition. The dynamics of soil \u03b2-glucosidase, urease and phosphatase varied, especially in the treatments with high microplastic addition. Particles that were considerably smaller than the initially added microplastic particles were observed after 30 days incubation. This result thus implied that microplastic would hardly affect glyphosate decay but smaller plastic particles accumulated in soils which potentially threaten soil quality would be further concerned especially in the regions with intensive plastic mulching application.", "keywords": ["2. Zero hunger", "Glyphosate", "Herbicides", "Microplastic", "Glycine", "Pesticide Residues", "Tetrazoles", "Isoxazoles", "15. Life on land", "01 natural sciences", "Soil quality", "Soil", "Pesticide decay", "Models", " Chemical", "Soil Pollutants", "Plastics", "Soil microbial activities", "Soil Microbiology", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2018.07.006"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2018.07.006", "name": "item", "description": "10.1016/j.envpol.2018.07.006", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2018.07.006"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-11-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2023.121325", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:42Z", "type": "Journal Article", "created": "2023-02-22", "title": "Extracellular DNA includes an important fraction of high-risk antibiotic resistance genes in treated wastewaters", "description": "Wastewater treatment plants are among the main hotspots for the release of antibiotic resistance genes (ARGs) into the environment. ARGs in treated wastewater can be found in the intracellular DNA (iDNA) and in the extracellular DNA (eDNA). In this study, we investigated the fate and the distribution (either in eDNA or in iDNA) of ARGs in the treated wastewaters pre and post-disinfection by shotgun metagenomics. The richness of the intracellular resistome was found to be higher than the extracellular one. However, the latter included different high risk ARGs. About 11% of the recovered metagenome assembled genomes (MAGs) from the extracted DNA was positive for at least one ARG and, among them, several were positive for more ARGs. The high-risk ARG bacA was the most frequently detected gene among the MAGs. The disinfection demonstrated to be an important driver of the composition of the antibiotic resistomes. Our results demonstrated that eDNA represents an important fraction of the overall ARGs, including a number of high-risk ARGs, which reach the environment with treated wastewater effluents. The studied disinfections only marginally affect the whole antibiotic resistome but cause important shifts from intracellular to extracellular DNA, potentially threating human health.", "keywords": ["0301 basic medicine", "0303 health sciences", "Drug Resistance", " Microbial", "DNA", "Wastewater", "Antimicrobial resistance", "6. Clean water", "MAG", "Anti-Bacterial Agents", "Disinfection", "03 medical and health sciences", "13. Climate action", "Extracellular DNA", "Genes", " Bacterial", "Humans", "Metagenomics"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2023.121325"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2023.121325", "name": "item", "description": "10.1016/j.envpol.2023.121325", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2023.121325"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-04-01T00:00:00Z"}}, {"id": "10.1016/j.envres.2018.12.007", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:42Z", "type": "Journal Article", "created": "2018-12-06", "title": "Distribution of antibiotic resistance genes in soils and crops. A field study in legume plants (Vicia faba L.) grown under different watering regimes", "description": "Social concern has raised during the last years due to the development of antibiotic resistance hotspots in different environmental compartments, including the edible parts of crops. To assess the influence of the water quality used for watering, we collected samples from soil, roots, leaves and beans from the legume plant Vicia faba (broad beans) in three agricultural peri-urban plots (Barcelona, NE Spain), irrigated with either groundwater, river water, or reclaimed water. Antibiotic resistance genes (ARGs) sul1, tetM, qnrS1, blaCTX-M-32,blaOXA-58, mecA, and blaTEM were quantified by real-time PCR, along with 16S rDNA and intl1 sequences, as proxies for bacterial abundance and integron prevalence, respectively. Microbiome composition of all samples were analyzed by high-throughput DNA sequencing. Results show a gradient of bacterial species diversity and of ARG prevalence from highly diverse soil samples to microbially-poor beans and leaves, in which Rhizobiales essentially displaced all other groups, and that presented very small loads of ARGs and integron sequences. The data suggest that the microbiome and the associated resistome were likely influenced by agricultural practices and water quality, and that future irrigation water legal standards should consider the specific Physiology of the different crop plants.", "keywords": ["2. Zero hunger", "0301 basic medicine", "0303 health sciences", "Agriculture", "Drug Resistance", " Microbial", "Fabaceae", "Wastewater", "15. Life on land", "6. Clean water", "Anti-Bacterial Agents", "Vicia faba", "Soil", "03 medical and health sciences", "Genes", " Bacterial", "Spain", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1016/j.envres.2018.12.007"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envres.2018.12.007", "name": "item", "description": "10.1016/j.envres.2018.12.007", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envres.2018.12.007"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-03-01T00:00:00Z"}}, {"id": "10.1016/j.envres.2019.108608", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:42Z", "type": "Journal Article", "created": "2019-07-26", "title": "Antibiotic resistance gene distribution in agricultural fields and crops. A soil-to-food analysis", "description": "Despite the social concern about the generalization of antibiotic resistance hotspots worldwide, very little is known about the contribution of different potential sources to the global risk. Here we present a quantitative analysis of the distribution of Antibiotic Resistance Genes (ARGs) in soil, rhizospheric soil, roots, leaves and beans in tomato, lettuce and broad beans crops (165 samples in total), grown in nine commercial plots distributed in four geographical zones in the vicinity of Barcelona (North East Spain). We also analyzed five soil samples from a nearby forest, with no record of agricultural activities. DNA samples were analyzed for their content in the ARGs sul1, tetM, qnrS1, blaCTX-M-32, blaOXA-58, mecA, and blaTEM, plus the integron intI1, using qPCR methods. In addition, soil microbiomes from the different plots were analyzed by amplicon-targeted 16S rRNA gene sequencing. Our data show a decreasing gradient of ARG loads from soil to fruits and beans, the latter showing only from 0.1 to 0.01% of the abundance values in soil. The type of crop was the main determinant for both ARG distribution and microbiome composition among the different plots, with minor contributions of geographic location and irrigation water source. We propose that soil amendment and/or fertilization, more than irrigation water, are the main drivers of ARG loads on the edible parts of the crop, and that they should therefore be specifically controlled.", "keywords": ["0301 basic medicine", "2. Zero hunger", "Microbiomes", "Agriculture", "Drug Resistance", " Microbial", "Irrigation water", "15. Life on land", "01 natural sciences", "6. Clean water", "Anti-Bacterial Agents", "3. Good health", "qPCR", "Soil", "03 medical and health sciences", "Antibiotic resistance genes", "Genes", " Bacterial", "Spain", "RNA", " Ribosomal", " 16S", "Rhizosphere", "Endophytes", "Food Analysis", "Soil Microbiology", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envres.2019.108608"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envres.2019.108608", "name": "item", "description": "10.1016/j.envres.2019.108608", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envres.2019.108608"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-10-01T00:00:00Z"}}, {"id": "10.1016/j.envres.2024.118395", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:42Z", "type": "Journal Article", "created": "2024-02-01", "title": "Sustainable strategies: Nature-based solutions to tackle antibiotic resistance gene proliferation and improve agricultural productivity and soil quality", "description": "The issue of antibiotic resistance is now recognized by the World Health Organisation (WHO) as one of the major problems in human health. Although its effects are evident in the healthcare settings, the root cause should be traced back to the One Health link, extending from animals to the environment. In fact, the use of organic fertilizers in agroecosystems represents one, if not the primary, cause of the introduction of antibiotics and antibiotic-resistant bacteria into the soil. Since the concentrations of antibiotics introduced into the soil are residual, the agroecosystem has become a perfect environment for the selection and proliferation of antibiotic resistance genes (ARGs). The continuous influx of these emerging contaminants (i.e., antibiotics) into the agroecosystem results in the selection and accumulation of ARGs in soil bacteria, occasionally giving rise to multi-resistant bacteria. These bacteria may harbour ARGs related to various antibiotics on their plasmids. In this context, these bacteria can potentially enter the human sphere when individuals consume food from contaminated agroecosystems, leading to the acquisition of multi-resistant bacteria. Once introduced into the nosocomial environment, these bacteria pose a significant threat to human health. In this review, we analyse how the use of digestate as an organic fertilizer can mitigate the spread of ARGs in agroecosystems. Furthermore, we highlight how, according to European guidelines, digestate can be considered a Nature-Based Solution (NBS). This NBS not only has the ability to mitigate the spread of ARGs in agroecosystems but also offers the opportunity to further improve Microbial-Based Solutions (MBS), with the aim of enhancing soil quality and productivity.", "keywords": ["Manure", "Soil", "Bacteria", "Genes", " Bacterial", "agroecosystem; digestate; one health; microbial-based solutions", "Animals", "Humans", "Drug Resistance", " Microbial", "Soil Microbiology", "Anti-Bacterial Agents", "Cell Proliferation"]}, "links": [{"href": "https://doi.org/10.1016/j.envres.2024.118395"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envres.2024.118395", "name": "item", "description": "10.1016/j.envres.2024.118395", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envres.2024.118395"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-05-01T00:00:00Z"}}, {"id": "10.1016/j.ese.2023.100276", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:43Z", "type": "Journal Article", "created": "2023-04-09", "title": "Influence of carbon-based cathodes on biofilm composition and electrochemical performance in soil microbial fuel cells", "description": "Increasing energy demands and environmental pollution concerns press for sustainable and environmentally friendly technologies. Soil microbial fuel cell (SMFC) technology has great potential for carbon-neutral bioenergy generation and self-powered electrochemical bioremediation. In this study, an in-depth assessment on the effect of several carbon-based cathode materials on the electrochemical performance of SMFCs is provided for the first time. An innovative carbon nanofibers electrode doped with Fe (CNFFe) is used as cathode material in membrane-less SMFCs, and the performance of the resulting device is compared with SMFCs implementing either Pt-doped carbon cloth (PtC), carbon cloth, or graphite felt (GF) as the cathode. Electrochemical analyses are integrated with microbial analyses to assess the impact on both electrogenesis and microbial composition of the anodic and cathodic biofilm. The results show that CNFFe and PtC generate very stable performances, with a peak power density (with respect to the cathode geometric area) of 25.5 and 30.4\u00a0mW\u00a0m-2, respectively. The best electrochemical performance was obtained with GF, with a peak power density of 87.3\u00a0mW\u00a0m-2. Taxonomic profiling of the microbial communities revealed differences between anodic and cathodic communities. The anodes were predominantly enriched with Geobacter and Pseudomonas species, while cathodic communities were dominated by hydrogen-producing and hydrogenotrophic bacteria, indicating H2 cycling as a possible electron transfer mechanism. The presence of nitrate-reducing bacteria, combined with the results of cyclic voltammograms, suggests microbial nitrate reduction occurred on GF cathodes. The results of this study can contribute to the development of effective SMFC design strategies for field implementation.", "keywords": ["Environmental sciences", "13. Climate action", "ORR catalyst", "Carbon nanofibre", "GE1-350", "Soil microbial fuel cells; ORR catalyst; Carbon nanofibre; Microbial profiling", "Soil microbial fuel cells", "7. Clean energy", "Microbial profiling", "Environmental technology. Sanitary engineering", "Special Section on Electrochemistry for the Environment", "6. Clean water", "TD1-1066"]}, "links": [{"href": "https://doi.org/10.1016/j.ese.2023.100276"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20and%20Ecotechnology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ese.2023.100276", "name": "item", "description": "10.1016/j.ese.2023.100276", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ese.2023.100276"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-10-01T00:00:00Z"}}, {"id": "10.1016/j.foodres.2022.112202", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:16:47Z", "type": "Journal Article", "created": "2022-11-19", "title": "Evidence of virulence and antibiotic resistance genes from the microbiome mapping in minimally processed vegetables producing facilities", "description": "Daily consumption of fresh vegetables is highly recommended by international health organizations, because of their high content of nutrients. However, fresh vegetables might harbour several pathogenic microorganisms or contribute to spread antibiotic resistance, thus representing a hazard for consumers. In addition, little is known about the transmission routes of the residential microbiome from the food handling environment to vegetables. Therefore, we collected environmental and food samples from three manufactures producing fresh vegetables to estimate the relevance of the built environment microbiome on that of the finished products. Our results show that food contact surfaces sampled after routine cleaning and disinfection procedures host a highly diverse microbiome, including pathogens such as the enterotoxigenic Bacillus cereus sensu stricto. In addition, we provide evidence of the presence of a wide range of antibiotic resistance and virulence genes on food contact surfaces associated with multiple taxa, thus supporting the hypothesis that selection of resistant and pathogenic taxa might occur on sanitized surfaces. This study also highlights the potential of microbiome mapping routinely applied in food industries monitoring programs to ensure food safety.", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Food industry", "Virulence", "3309 Tecnolog\u00eda de Los Alimentos", "Antimicrobials", "Biolog\u00eda", "Tecnolog\u00eda de los alimentos", "Biofilm", "Microbiota", "Drug Resistance", " Microbial", "Anti-Bacterial Agents", "03 medical and health sciences", "Bacillus cereus", "Vegetables", "Antimicrobials; Bacillus cereus; Biofilm; Food industry; Metagenomics", "Metagenomics", "2414 Microbiolog\u00eda"]}, "links": [{"href": "https://www.iris.unina.it/bitstream/11588/903001/1/1-s2.0-S0963996922012601-main.pdf"}, {"href": "https://doi.org/10.1016/j.foodres.2022.112202"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Food%20Research%20International", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.foodres.2022.112202", "name": "item", "description": "10.1016/j.foodres.2022.112202", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.foodres.2022.112202"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-12-01T00:00:00Z"}}, {"id": "10.1111/gcb.17516", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:19:59Z", "type": "Journal Article", "created": "2024-09-24", "title": "Phosphorus limitation promotes soil carbon storage in a boreal forest exposed to long\u2010term nitrogen fertilization", "description": "Abstract<p>Forests play a crucial role in global carbon cycling by absorbing and storing significant amounts of atmospheric carbon dioxide. Although boreal forests contribute to approximately 45% of the total forest carbon sink, tree growth and soil carbon sequestration are constrained by nutrient availability. Here, we examine if long\uffe2\uff80\uff90term nutrient input enhances tree productivity and whether this leads to carbon storage or whether stimulated microbial decomposition of organic matter limits soil carbon accumulation. Over six decades, nitrogen, phosphorus, and calcium were supplied to a Pinus sylvestris\uffe2\uff80\uff90dominated boreal forest. We found that nitrogen fertilization alone or together with calcium and/or phosphorus increased tree biomass production by 50% and soil carbon sequestration by 65% compared to unfertilized plots. However, the nonlinear relationship observed between tree productivity and soil carbon stock across treatments suggests microbial regulation. When phosphorus was co\uffe2\uff80\uff90applied with nitrogen, it acidified the soil, increased fungal biomass, altered microbial community composition, and enhanced biopolymer degradation capabilities. While no evidence of competition between ectomycorrhizal and saprotrophic fungi has been observed, key functional groups with the potential to reduce carbon stocks were identified. In contrast, when nitrogen was added without phosphorus, it increased soil carbon sequestration because microbial activity was likely limited by phosphorus availability. In conclusion, the addition of nitrogen to boreal forests may contribute to global warming mitigation, but this effect is context dependent.</p", "keywords": ["570", "Carbon Sequestration", "microbial community composition", "", "carbon storage", " microbial communities", " boreal forest", " fertilization", "Nitrogen", "microbial community composition", "Forests", "structural equation modeling", "Trees", "Soil", "soil carbon storage", "Taiga", "Biomass", "Fertilizers", "info:eu-repo/classification/udc/630*1", "Soil Microbiology", "nutrient limitation", "Phosphorus", "Pinus sylvestris", "boreal forest ecosystem", "Carbon", "fertilization", "tree woody biomass", "shranjevanje ogljika", " mikrobne zdru\u017ebe", " borealni gozdovi", " gnojenje", "Calcium", "microbial degradation"]}, "links": [{"href": "https://doi.org/10.1111/gcb.17516"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.17516", "name": "item", "description": "10.1111/gcb.17516", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.17516"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-09-01T00:00:00Z"}}, {"id": "10.1016/j.ijfoodmicro.2021.109504", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-03T16:17:07Z", "type": "Journal Article", "created": "2021-12-21", "title": "Development of a rapid qPCR method to quantify lactic acid bacteria in cold-smoked salmon", "description": "Quantification of lactic acid bacteria (LAB) is essential to control quality of seafood products like cold-smoked salmon (CSS). In the present study, we report the design and optimization of a dual-labelled TaqMan \u2122 probe targeting the V7 region of 16S rRNA gene for the detection of LAB in CSS. This quantitative PCR (qPCR) assays is useful for the simultaneous detection of the ten LAB genera communally encountered in CSS as Aerococcus, Carnobacterium, Enterococcus, Lactobacillus, Lactococcus, Leuconostoc, Macrococcus, Streptococcus, Vagococcus and Weissella. The specificity of this method was demonstrated against 14 genera (44 isolates, 35 species) of Gram-positive bacteria and 19 genera of Gram-negative (40 isolates, 34 species). Calibration of the method was performed in CSS matrix using a mix of equimolar cultured solution of five LAB. Quantification with the qPCR method range from 3.5 to 8.5 Log CFU/g in CSS matrix, covering 5 orders of magnitude. On these artificially contaminated CSS slices, PCR method results correlated successfully (R2\u00a0=\u00a00.9945) with the conventional enumeration on Elliker medium. In addition, the new method was successful on commercial CSS from five different origins with a quantification range from 3.7 Log CFU/g to 8.0 Log CFU/g. This one-step quantitative methodology is proposed as a rapid and complementary tool of the cultural methods to investigate the LAB microbiota and biodiversity of CSS.", "keywords": ["LAB", "0301 basic medicine", "0303 health sciences", "Colony Count", " Microbial", "Real-Time Polymerase Chain Reaction", "Lactobacillus", "03 medical and health sciences", "Seafood", "TaqMan TM probe", "Lactobacillales", "Salmon", "RNA", " Ribosomal", " 16S", "Food Microbiology", "Animals", "Real-time PCR"]}, "links": [{"href": "https://doi.org/10.1016/j.ijfoodmicro.2021.109504"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/International%20Journal%20of%20Food%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ijfoodmicro.2021.109504", "name": "item", "description": "10.1016/j.ijfoodmicro.2021.109504", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ijfoodmicro.2021.109504"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-01T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=+Microbial&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=+Microbial&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=+Microbial&", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=+Microbial&offset=50", "hreflang": "en-US"}], "numberMatched": 244, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-04-04T07:29:16.552846Z"}