{"type": "FeatureCollection", "features": [{"id": "10.1016/j.apsoil.2007.12.010", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:15:24Z", "type": "Journal Article", "created": "2008-02-08", "title": "Deepened Snow Alters Soil Microbial Nutrient Limitations In Arctic Birch Hummock Tundra", "description": "Abstract Microbial activity in the long arctic cold season is low but cumulatively important. In particular, the size of the microbial biomass and soil solution nutrient pool at the end of winter may control the quantity of nutrients available to plants in the following spring. Microbial starvation and lysis as a result of increasingly severe soluble carbon (C) shortages over winter has been hypothesized as a potential mechanism for microbial nutrient release at thaw. These C shortages may be exacerbated by the warmer temperatures and increased winter precipitation that are consistently predicted for a large part of the low Arctic. In particular, warmer soil temperatures due to deeper snow may increase wintertime microbial activity and organic matter decomposition over the winter, potentially resulting in enhanced nutrient availability to plants in the following growing season. In this study, we investigated nutrient limitations to soil microbial growth and activity in late winter under ambient and experimentally deepened snow (\u223c0.3 and 1\u00a0m respectively) in birch hummock tundra within the Canadian low Arctic. We hypothesized that the build-up of moderately deeper snow over winter would exacerbate soluble C-limitation to microbial growth and activity and increase soluble N accumulation, and thus stimulate the growth of bacteria relative to fungi. We measured the in situ response of the soil microbial biomass and soil soluble pools in control and snow-fenced plots at the end of winter, and then incubated soils from these plots with added C, nitrogen (N) and phosphorus (P) (at 0\u201315\u00a0\u00b0C) to characterize nutrient limitations to microbial growth and activity. In late winter, deepened snow increased the microbial pool of N, yet decreased soil pools of dissolved organic N and C, and decreased bacterial counts. Fungal mass and hyphal lengths did not change, but remained dominant under both ambient and deepened snow. Deepened snow exacerbated the soluble C-limitation to microbial growth and reduced the P-limitation for microbial respiration. Fungal mass and hyphal length responses to nutrient addition were larger than the bacterial mass or abundance responses and fungi from under deepened snow responded more than those from under ambient snow, indicating a different potential structural and physiological response to substrate availability for these two soil microbial communities. Our results indicate that deeper snow may increase microbial nutrient pools and can alter the physiological functioning of the soil microbial community in late winter, suggesting that microbial N release and its availability to plants during spring thaw may be enhanced.", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land"]}, "links": [{"href": "https://doi.org/10.1016/j.apsoil.2007.12.010"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Soil%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.apsoil.2007.12.010", "name": "item", "description": "10.1016/j.apsoil.2007.12.010", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.apsoil.2007.12.010"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-06-01T00:00:00Z"}}, {"id": "10.1016/j.ecoleng.2016.06.124", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:15:41Z", "type": "Journal Article", "created": "2016-07-26", "title": "Effects of grazing exclusion on carbon sequestration and plant diversity in grasslands of China A meta-analysis", "description": "Abstract Widespread land degradation has strengthened the urgent need to restore overgrazing grasslands. China has implemented the program \u2018Returning Grazing Land to Grassland\u2019 (RGLG) through grazing exclusion by fence since 2003. Despite a lot of field experiments, there is still controversy on the effects of grazing exclusion on rangeland restoration, highlighting the need for synthetic analysis. We conducted a meta-analysis of 447 entries from 78 papers to analyze the spatiotemporal effects of grazing exclusion on plant diversity, productivity and soil carbon sequestration in the major RGLG-implemented provinces of China. Our results showed that, compared with the grazed sites, grazing exclusion significantly increased carbon stored in aboveground biomass, litter mass, belowground biomass and soils by 84.7%, 111.6%, 25.5% and 14.4%, respectively. Plant coverage, soil available nitrogen, soil available phosphorus and soil microbial biomass carbon increased by 52.0%, 21.7% 22.8% and 26.3%, respectively. However, grazing exclusion had little effects on recovering plant diversity in China\u2019s grasslands. Of the factors examined, climatic factors strongly modified the effects of grazing exclusion on ecosystem carbon stocks, for example, precipitation significantly amplified the positive effects. Grazing exclusion played a positive role in soil carbon sequestration in most grassland types except in temperate desert-steppe. But annual soil carbon sequestration rates decayed rapidly over time in both alpine meadow and temperate steppe. Short-term (\u22645\u00a0years) grazing exclusion remarkably increased species richness, but not significantly in the long run. The threshold from neutral to negative effects of grazing exclusion on species evenness occurs after approximately ten years. Our findings provide evidence that grazing exclusion is an effective way to restore vegetation and sequestrate carbon in degraded grasslands, but not beneficial to plant diversity maintenance. The benefits of grazing exclusion are more effective in humid area than arid area. We suggest that grazing exclusion should be ceased after about six to ten years. Additionally, grazing exclusion should integrate with other appropriate management practices instead of operating on a stand-alone basis.", "keywords": ["2. Zero hunger", "0106 biological sciences", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.ecoleng.2016.06.124"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Engineering", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ecoleng.2016.06.124", "name": "item", "description": "10.1016/j.ecoleng.2016.06.124", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ecoleng.2016.06.124"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2012.03.010", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:16:10Z", "type": "Journal Article", "created": "2012-05-08", "title": "Two Decades Of Low-Severity Prescribed Fire Increases Soil Nutrient Availability In A Midwestern, Usa Oak (Quercus) Forest", "description": "Abstract For the last 23\u00a0years, low-severity prescribed fire has been used to decrease shade and fire tolerant tree species, increase oak ( Quercus spp.), and increase herbaceous plant diversity in the East Woods of The Morton Arboretum, Lisle, Illinois, USA. The impacts of these fires on the belowground ecosystem have yet to be measured. Soil (0 to 10\u00a0cm) and litter samples were collected 12, 19, and 24\u00a0months following the most recent fire on 40 plots in burned and un-burned control areas. Soil physical, chemical, and biological properties were measured and compared with vegetation composition and structure from these same plots. Compared to un-burned controls, burn plots had greater canopy openness, greater herbaceous richness, and a lower spring/summer herbaceous ratio. Burned plots had higher soil moisture content, pH, electrical conductivity, Ca 2\u00a0+ , Mg 2\u00a0+ , K + , Na + , NO 3 \u2212 , total N, particulate organic matter (POM), total organic C, and potential N mineralization. Soil microbial biomass and respiration, texture, color, aggregate stability, and hydrophobicity were not different in burned compared to un-burned plots. Indices of litter and soil invertebrate diversity were also not affected by prescribed fire. Three stepwise least squares models predicted woody richness, herbaceous richness, and spring/summer herbs with aspect, litter invertebrate richness, and soil factors (pH, potential N mineralization, C/N ratio, Mg 2\u00a0+ , Bray P, and soil invertebrate Simpson index). These results confirm others showing prescribed fire to increase soil nutrient availability. Forest structural changes with fire appear correlated with soil nutrient availability. Decreased soil C, nutrient retention, invertebrate diversity, or increased hydrophobicity and the presence of exotic plants is often observed with high-severity fire; but, these negative impacts do not appear to be present with these long-term, low-severity fires.", "keywords": ["0106 biological sciences", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "K.A. Jacobs, Marlin L. Bowles, Bryant C. Scharenbroch, B. Nix,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2012.03.010"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2012.03.010", "name": "item", "description": "10.1016/j.geoderma.2012.03.010", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2012.03.010"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-08-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2019.05.236", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:16:35Z", "type": "Journal Article", "created": "2019-05-22", "title": "A review of threats to groundwater quality in the anthropocene", "description": "Awareness concerning sustainable groundwater consumption under the context of land use and climate change is gaining traction, raising the bar for adequate understanding of the complexities of natural and anthropogenic processes and how they affect groundwater quality. The heterogeneous characteristics of aquifers have hampered comprehensive source, transport and contaminant identification. As questions remain about the behavior and prediction of well-known groundwater contaminants, new concerns around emerging contaminants are on the increase. This review highlights some of the key contaminants that originate from anthropogenic activities, organized based on land use categories namely agricultural, urban and industrial. It further highlights the extensive overlap, in terms of both provenance as well as contaminant type, between the different land use sectors. A selection of case studies from literature that describe the continued concern of established contaminants, as well as new and emerging compounds, are presented to illustrate the many qualitative threats to global groundwater resources. In some cases, the risk of groundwater contamination lacks adequate gravity, while in others the underlying physical and societal processes are not fully understood and activities may commence without adequately considering potential impacts. In the agricultural context, the historic and current application of fertilizers and plant protectants, use of veterinary pharmaceuticals and hormones, strives to safeguard the growing food demands. In the context of a sprawling urban environment, waste, human pharmaceuticals, and urban pesticide outputs are increasing, with adequate runoff and sanitation infrastructure often lagging. Finally, industrial activities are associated with accidental leaks and spills, while the large-scale storage of industrial byproducts has led to legacy contaminants such as those stemming from raw mineral extraction. With this review paper, we aim to underscore the need for transdisciplinary research, along with transboundary communication, using sound science and adaptive policy and management practice in order to procure sustainable groundwater quality.", "keywords": ["2. Zero hunger", "13. Climate action", "11. Sustainability", "15. Life on land", "01 natural sciences", "6. Clean water", "0105 earth and related environmental sciences", "12. Responsible consumption"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2019.05.236"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2019.05.236", "name": "item", "description": "10.1016/j.scitotenv.2019.05.236", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2019.05.236"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-09-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2014.02.009", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:16:47Z", "type": "Journal Article", "created": "2014-02-26", "title": "Pyrogenic Carbon Additions To Soil Counteract Positive Priming Of Soil Carbon Mineralization By Plants", "description": "Abstract Important due to both its role in fire-affected ecosystems, and also its proposed intentional production and application for carbon (C) management, pyrogenic organic matter (PyOM) is thought to contain very stable forms of C. However, the mechanisms behind its interactions with non-PyOM soil organic C (SOC) remain speculative, with studies often showing short-term positive and then long-term negative \u201cpriming effects\u201d on SOC decomposition after PyOM applications. Furthermore, studies of these interactions to date have been limited to systems that do not include plants. This study describes results from a 12-week greenhouse experiment where PyOM-SOC priming effects with and without plants were investigated using stable isotope partitioning. In addition, we investigated the optimal \u03b413C proxies for sources of SOC, PyOM, and plant-derived CO2 emissions. The two-factorial experiment included the presence or absence of corn plants and of 13C-labelled PyOM. In order to control for pH and nutrient addition effects from PyOM, its pH was adjusted to that of the soil and optimal nutrient and water conditions were provided to the plants. The \u03b413C of PyOM sub-components were significantly different. Significant losses of 0.4% of the applied PyOM-C occurred in the first week. We find evidence for a \u201cnegative priming\u201d effect of PyOM on SOC in the system (SOC losses are 48% lower with PyOM present), which occurred primarily during the first week, indicating it may be due to transient effects driven by easily mineralizable PyOM. Additionally, while the presence of corn plants resulted in significantly increased SOC losses (\u201cpositive priming\u201d), PyOM additions counteract this effect, almost completely eliminating net C losses either by decreasing SOC decomposition or increasing corn C additions to soil. This highlights the importance of including plants in studies of PyOM-SOC interactions.", "keywords": ["2. Zero hunger", "13. Climate action", "8. Economic growth", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"], "contacts": [{"organization": "Thea Whitman, Akio Enders, Johannes Lehmann,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2014.02.009"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2014.02.009", "name": "item", "description": "10.1016/j.soilbio.2014.02.009", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2014.02.009"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-06-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2017.09.018", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:16:49Z", "type": "Journal Article", "created": "2017-09-22", "title": "Effect of fertilization on soil microorganisms in paddy rice systems - A meta-analysis", "description": "Abstract Soil microorganisms are considered a sensitive indicator of soil health and quality. In cropping systems, soil microorganisms are strongly affected by crop management, including the application of fertilizers. While studies in natural ecosystems have generally found that increased nitrogen (N) inputs decrease microbial biomass, microorganisms in soils under upland crops often benefit from mineral fertilizer input. Paddy rice soils, being flooded for part of the season, are dominated by different carbon (C) and N cycle processes and microbial communities than soils under upland crops. The objective of this study was to explore the effect of fertilizer on soil microorganisms in paddy rice systems in a meta-analysis of the peer-reviewed literature. Across all studies (n\u00a0=\u00a055), the addition of mineral fertilizer significantly increased microbial biomass carbon content (MBC) by 26% in paddy rice soils. Mineral fertilizer applications also increased soil organic carbon content (SOC) by 13%. The higher crop productivity with fertilization likely led to higher organic C inputs, which in turn increased SOC and MBC contents. The time of sampling within a season (pre-plant rice, in-season rice, post-harvest rice, or post-harvest rotational crop) did not significantly affect the response of MBC to mineral fertilizer. The positive effect of mineral fertilizer on MBC content did not differ between cropping systems with continuous rice and systems where paddy rice was grown in rotation with other crops. However, compared with upland cropping systems, the increase in the microbial biomass due to mineral fertilizer application is more pronounced in rice cropping systems, even when rice is grown in rotation with an upland crop. Differences in climate and soil oxygen availability likely explain the stronger response of soil microorganisms to mineral fertilizer input in paddy rice systems. Our analysis suggests that fertilization does not consistently select for specific microbial groups (e.g. gram positive or negative bacteria, fungi, actinomycetes) in paddy rice systems; however, it affects microbial community composition through changes in soil properties. How specific groups of microorganisms respond to mineral fertilization likely depends on environmental factors. Overall, our results suggest that in paddy rice systems the application of inorganic fertilizers increases SOC and MBC contents, both of which are important indicators of soil health.", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water"], "contacts": [{"organization": "Bruce A. Linquist, Patricia Lazicki, Daniel Geisseler,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2017.09.018"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2017.09.018", "name": "item", "description": "10.1016/j.soilbio.2017.09.018", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2017.09.018"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-12-01T00:00:00Z"}}, {"id": "10.1016/j.still.2007.02.006", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:16:55Z", "type": "Journal Article", "created": "2007-03-29", "title": "Nitrogen Fertilization And Cropping Systems Effects On Soil Organic Carbon And Total Nitrogen Pools Under Chisel-Plow Tillage In Illinois", "description": "Abstract Agricultural soils can be a major sink for atmospheric carbon (C) with adoption of recommended management practices (RMPs). Our objectives were to evaluate the effects of nitrogen (N) fertilization and cropping systems on soil organic carbon (SOC) and total N (TN) concentrations and pools. Replicated soil samples were collected in May 2004 to 90\u00a0cm depth from a 23-year-old experiment at the Northwestern Illinois Agricultural Research and Demonstration Center, Monmouth, IL. The SOC and TN concentrations and pools, soil bulk density ( \u03c1 b ) and soil C:N ratio were measured for five N rates [0 (N 0 ), 70 (N 1 ), 140 (N 2 ), 210 (N 3 ) and 280 (N 4 ) kg\u00a0N\u00a0ha \u22121 ] and two cropping systems [continuous corn ( Zea mays L.) (CC), and corn\u2013soybean ( Glycine max (L . ) Merr.) rotation (CS)]. Long-term N fertilization and cropping systems significantly influenced SOC concentrations and pools to 30\u00a0cm depth. The SOC pool in 0\u201330\u00a0cm depth ranged from 68.4\u00a0Mg\u00a0ha \u22121 for N 0 to 75.8\u00a0Mg\u00a0ha \u22121 for N 4 . Across all N treatments, the SOC pool in 0\u201330\u00a0cm depth for CC was 4.7\u00a0Mg\u00a0ha \u22121 greater than for CS. Similarly, TN concentrations and pools were also significantly affected by N rates. The TN pool for 0\u201330\u00a0cm depth ranged from 5.36\u00a0Mg\u00a0ha \u22121 for N 0 to 6.14\u00a0Mg\u00a0ha \u22121 for N 4 . In relation to cropping systems, the TN pool for 0\u201320\u00a0cm depth for CC was 0.4\u00a0Mg\u00a0ha \u22121 greater than for CS. The increase in SOC and TN pools with higher N rates is attributed to the increased amount of biomass production in CC and CS systems. Increasing N rates significantly decreased \u03c1 b for 0\u201330\u00a0cm and decreased the soil C:N ratio for 0\u201310\u00a0cm soil depth. However, none of the measured soil properties were significantly correlated with N rates and cropping systems below 30\u00a0cm soil depth. We conclude that in the context of developing productive and environmentally sustainable agricultural systems on a site and soil specific basis, the results from this study is helpful to strengthening the database of management effects on SOC storage in the Mollisols of Midwestern U.S.", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.still.2007.02.006"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20and%20Tillage%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.still.2007.02.006", "name": "item", "description": "10.1016/j.still.2007.02.006", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.still.2007.02.006"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-09-01T00:00:00Z"}}, {"id": "10.1017/s1357729800055235", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:17:10Z", "type": "Journal Article", "created": "2016-08-19", "title": "The Effect Of Crop Maturity On The Nutritional Value Of Maize Silage For Lactating Dairy Cows 1. Energy And Nitrogen Utilization", "description": "Abstract

Four multiparous Holstein-Friesian cows fitted with simple cannulas in the proximal duodenum and the rumen were offered four diets in a 4 \uffe2\uff9c\uff95 4 Latin-square design to evaluate the effect on energy and nitrogen balance of crop maturity of maize when offered as ensiled food with grass silage and a concentrate. Forage maize (cv. Hudson) was ensiled at target dry matter (DM) contents of 230, 280, 330 and 380 g per kg fresh weight (FW). The mean values for volatile corrected DM (VCDM) and starch content of the maize forages as given were 226, 278, 319 and 357 g/kg FW and 180, 263, 327 and 401 g/kg VCDM respectively. Grass silage (GS) containing 247 g VCDM per kg FW was produced from the primary growth of a perennial ryegrass sward. The diets comprised 8\uffc2\uffb77 kg DM concentrate per day with one of four forage treatments offered ad libitum, in a 3 : 1 DM ratio of maize silage with GS, designated T23, T28, T33 and T38. Each period was of 6 weeks with energy and nitrogen balances conducted in respiration chambers over 6 days in either week 5 or 6. There were no significant effects of maturity on DM intake. Changes in milk yield and composition were not significant but milk protein yield increased significantly (P < 0\uffc2\uffb705) with maize maturity up to T33 and was linearly related (P < 0\uffc2\uffb705) to changes in maize silage starch and neutraland acid-detergent fibre (NDF, ADF) content. Total starch intake increased significantly (P < 0\uffc2\uffb701) with maturity but apparent digestibility of starch was significantly (P < 0\uffc2\uffb705) reduced only with the most mature maize silage (T38). NDF and ADF intake and amounts digested were not significantly different despite a numerical decline with stage of maturity. Total nitrogen intake and apparent digestibility were not significantly different although there were significant differences (P < 0\uffc2\uffb705) in the amount of nitrogen excreted as urine, which was greatest on T23 and least on T33, and milk which was least on T23 and greatest on T33. Mean gross energy (GE) intake increased by 17 MJ/day from T23 to T33 but the differences were non-significant. Faecal energy output on T23 was significantly lower (P < 0\uffc2\uffb705) than the other treatments whilst urine energy on T23 was significantly higher (P < 0\uffc2\uffb705) compared with T33. Methane energy losses were not significantly different. There were no significant differences between treatments in either GE digestibility or metabolizability, digestible or metabolizable energy (ME) intakes or in the partition of ME to heat, tissue or milk. The calculated ME concentrations of the maize silages were not significantly different with an overall mean of 12\uffc2\uffb73 MJ/kg VCDM estimated at maintenance intake, or 0\uffc2\uffb763 MJ/MJ GE. Changes in maize silage composition resulted in a doubling of the ratio of digested starch to digested NDF (0\uffc2\uffb766, 0\uffc2\uffb794, 1\uffc2\uffb710 and 1\uffc2\uffb721) for treatments T23 to T38 respectively. Despite this large change in digested nutrients no differences in the efficiency of energy utilization were detected.

", "keywords": ["0403 veterinary science", "2. Zero hunger", "0402 animal and dairy science", "04 agricultural and veterinary sciences"], "contacts": [{"organization": "David J. Humphries, R. H. Phipps, S. B. Cammell, David E. Beever, J. D. Sutton,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1017/s1357729800055235"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Animal%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1017/s1357729800055235", "name": "item", "description": "10.1017/s1357729800055235", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1017/s1357729800055235"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2000-10-01T00:00:00Z"}}, {"id": "10.1023/a:1004298309606", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:17:15Z", "type": "Journal Article", "created": "2002-12-21", "description": "Fluxes of nitrous oxide, methane and carbon dioxide were measured from soils under ambient (350 \u00b5L L-1) and enhanced (600 \u00b5L L-1) carbon dioxide partial pressures (pCO2) at the \u2018Free Air Carbon Dioxide Enrichment\u2019 (FACE) experiment, Eidgenossische Technische Hochschule (ETH), Eschikon, Switzerland in July 1995, using a GC housed in a mobile laboratory. Measurements were made in plots of Lolium perenne maintained under high N input. During the data collection period N fertiliser was applied at a rate of 14 g m-2 of N. Elevated pCO2 appeared to result in an increased (27%) output of N2O, thought to be the consequence of enhanced root-derived available soil C, acting as an energy source for denitrification. The climate, agricultural practices and soils at the FACE experiment combined to give rise to some of the largest N2O emissions recorded for any terrestrial ecosystem. The amount of CO2\u2013C being lost from the control plot was higher (10%) than for the enhanced CO2 plot, and is the reverse of that predicted. The control plot oxidised consistently more CH4 than the enhanced plot, oxidising 25.5 \u00b1 0.8 \u00b5g m-2 hr-1 of CH4 for the control plot, with an average of 8.5 \u00b1 0.4 \u00b5g m-2 hr-1 of CH4 for the enhanced CO2 plot. This suggests that elevated pCO2 may lead to a feedback whereby less CH4 is removed from the atmosphere. Despite the limited nature of the current study (in time and space), the observations made here on the interactions of elevated pCO2 and soil trace gas release suggest that significant interactions are occurring. The feedbacks involved could have importance at the global scale.", "keywords": ["13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land"], "contacts": [{"organization": "Philip Ineson, P.A. Coward, U.A. Hartwig,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1023/a:1004298309606"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1023/a:1004298309606", "name": "item", "description": "10.1023/a:1004298309606", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1023/a:1004298309606"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1998-01-01T00:00:00Z"}}, {"id": "10.1073/pnas.2113148118", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:17:55Z", "type": "Journal Article", "created": "2021-09-14", "title": "Microbial self-recycling and biospherics", "description": "Microbes are well known as potent recyclers of leftover biomass in ecosystems, preventing nutrient cycles from simply getting stuck (1). However, a lot less is known about how microbes can recycle themselves, their own biomass. This is highly relevant, because microbes don\u2019t often find themselves in front of a lavish buffet, but rather have to eke out a living at the edge of nutrient and energy starvation. In their paper in PNAS, Shoemaker et al. (2) examine the ability of populations of bacteria to recycle their own biomass, elegantly combining long-term experiments with modeling. The authors enclosed 100 populations from 21 different taxa individually and followed their fate for 3 y\u2014all in the absence of matter or energy inputs. They find that almost all populations (except for one) survived, with extinction times estimated often in decades and far exceeding what would be expected from individual longevity under conditions of resource limitation. Thus, in many of the bacterial strains, when individuals die, living individuals can use the dead biomass of other individuals to increase their own survival and reproduction, thus greatly prolonging population persistence. These results are relevant to many questions in environmental microbiology. For example, this recycling ability, and thus the ability to maintain oneself during periods of adversity, may be part of the remarkable \u2026 [\u21b5][1]1To whom correspondence may be addressed. Email: rillig{at}zedat.fu-berlin.de. [1]: #xref-corresp-1-1", "keywords": ["2. Zero hunger", "15. Life on land", "Ecological Systems", " Closed", "Life Support Systems", "12. Responsible consumption", "3. Good health"]}, "links": [{"href": "https://pnas.org/doi/pdf/10.1073/pnas.2113148118"}, {"href": "https://doi.org/10.1073/pnas.2113148118"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20National%20Academy%20of%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1073/pnas.2113148118", "name": "item", "description": "10.1073/pnas.2113148118", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1073/pnas.2113148118"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-07T00:00:00Z"}}, {"id": "10.1093/jpe/rtv027", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:18:13Z", "type": "Journal Article", "created": "2015-03-07", "title": "Effects Of Precipitation On Soil Organic Carbon Fractions In Three Subtropical Forests In Southern China", "description": "Aims The aim of this study was to investigate the effects of precipitation changes on soil organic carbon (SOC) fractions in subtropical for- ests where the precipitation pattern has been altered for decades. Methods We conducted field manipulations of precipitation, including ambient precipitation as a control (CK), double precipitation (DP) and no precip- itation (NP), for 3 years in three forests with different stand ages (broad- leaf forest (BF), mixed forest (MF) and pine forest (PF)) in subtropical China. At the end of the experiment, soil samples were collected to assay SOC content, readily oxidizable organic carbon (ROC) and non-readily oxidizable organic carbon (NROC), as well as soil microbial biomass carbon (MBC), pH and total nitrogen content. Samples from the forest floors were also collected to analyze carbon (C) functional groups (i.e. alkyl C, aromatic C, O-alkyl C and carbonyl C). Furthermore, fine root biomass was measured periodically throughout the experiment. Important Findings Among the forests, ROC content did not exhibit any notable differ- ences, while NROC content increased significantly with the stand age. This finding implied that the SOC accumulation observed in these forests resulted from the accumulation of NROC in the soil, a mechanism for SOC accumulation in the mature forests of south- ern China. Moreover, NP treatment led to significant reductions in both ROC and NROC content and therefore reduced the total SOC content in all of the studied forests. Such decreases may be due to the lower plant-derived C inputs (C quantity) and to the changes in SOC components (C quality) indicated by C functional groups analyses under NP treatment. DP treatment in all the forests also tended to decrease the SOC content, although the decreases were not statistically significant with the exception of SOC and ROC con- tent in PF. This finding indicated that soils in MF and in BF may be more resistant to precipitation increases, possibly due to less water limitations under natural conditions in the two forests. Our results therefore highlight the different responses of SOC and its fractions to precipitation changes among the forests and suggest that further studies are needed to improve our understanding of SOC dynamics in such an important C sink region.", "keywords": ["13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land"], "contacts": [{"organization": "Guowei Chu, Guoyi Zhou, Xiaomei Chen, Qingyan Qiu, Guohua Liang, Shizhong Liu, Junhua Yan, Juxiu Liu, Deqiang Zhang,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1093/jpe/rtv027"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Plant%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/jpe/rtv027", "name": "item", "description": "10.1093/jpe/rtv027", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/jpe/rtv027"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-03-06T00:00:00Z"}}, {"id": "10.1094/pdis-06-21-1276-pdn", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:18:17Z", "type": "Journal Article", "created": "2022-01-10", "title": "First Report of Multinucleate Rhizoctonia solani AG4 HG-I Causing Crown and Root Rot on Strawberry in Italy", "description": "Strawberry (Fragaria\u00a0\u00d7\u00a0ananassa\u00a0Duch.) is a crop of great economic importance in Italy, where it is grown in soil and under soilless conditions. In March 2019, about 30 to 35% of plants (cv. Portola) grown in a peat substrate under soilless conditions in a farm located in Cuneo Province died. The examination of 10 plants showed crown and root rot over 100% of the root/crown. Affected plants showed brown necrotic tissues in basal leaves and petiole necrosis. Crown and root tissues were cleaned thoroughly from soil residues under tap water. Portions (about 3 to 5 mm) from crowns and roots were cut and surface disinfected with a water solution of NaClO at 0.5% for 2 min and rinsed in sterile water. The tissue fragments were plated on potato dextrose agar (PDA) amended with 100 mg/liter of streptomycin sulfate and incubated at 25\u00b0C. After 3 days, fungal colonies with septate hyphae and right-angled branching similar to\u00a0Rhizoctonia solani\u00a0were observed with high frequency (90%) (Sneh et\u00a0al. 1991). To confirm the species identity, hyphal tips were transferred from the obtained colonies to PDA and grown for 10 days at 22 \u00b1 1\u00b0C. Mycelium was light brown, compact, with radial growth. The hyphal width varied from 8.5 to 10 \u03bcm. Sclerotia were not present. DNA was then extracted from a single representative isolate (RH230), and rDNA ITS sequencing was conducted as described by\u00a0Aiello et\u00a0al. (2017). The rDNA ITS sequence of RH230 (GenBank accession no. MZ373271) was 100% identical (603/603 bp) to part of another sequence previously identified as\u00a0R. solani\u00a0AG4 HG-I (MK583647,\u00a0Claerbout et\u00a0al. 2019). Twenty-day-old healthy plants of cultivar Portola were planted in a steam-disinfested peat soil (12-liter pots) infested with 1 g/liter of wheat kernels colonized for 10 days with the isolate RH230 to evaluate the pathogenicity. Control plants were planted in a steam-disinfested peat substrate amended with noninoculated sterilized wheat kernels. Six plants per treatments were used and kept in a greenhouse at 25 \u00b1 3\u00b0C. Crown and root rot similar to that observed in the farm developed 40 to 55 days after inoculation and resulted in 50 to 66% dead plants during two repeated trials. Fungal colonies morphologically similar to\u00a0R. solani\u00a0were consistently reisolated from affected crowns, and the resequencing of the rDNA ITS region fulfilled Koch\u2019s postulates. Control plants remained healthy.\u00a0Rhizoctonia\u00a0isolates of AG-A and AG-G anastomosis groups were found as pathogens of strawberry in Italy (Manici and Bonora 2007), while the AG4 HG-I was reported in Israel (Sharon et\u00a0al. 2007).\u00a0R. solani\u00a0AG4 HG-I was found on other hosts (Aiello et\u00a0al. 2017); however, to our knowledge, this is the first report on strawberry in Italy. The disease could become a significant problem for soilless culture strawberry in Italy, causing severe yield losses.", "keywords": ["2. Zero hunger", "0301 basic medicine", "0303 health sciences", "03 medical and health sciences", "Crown rot; Rhizoctonia; Root rot; Strawberry", "15. Life on land", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1094/pdis-06-21-1276-pdn"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Disease", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1094/pdis-06-21-1276-pdn", "name": "item", "description": "10.1094/pdis-06-21-1276-pdn", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1094/pdis-06-21-1276-pdn"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "10.1099/acmi.ac2020.po0460", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:18:19Z", "type": "Journal Article", "created": "2020-07-14", "title": "Identification of isoprene-degrading bacteria in phyllosphere and soil communities from high isoprene-emitting oil palm trees by DNA-stable isotope probing", "description": "

Isoprene is the most abundant biogenic volatile organic compound (BVOC) on Earth, with annual global emissions almost equal to those from methane. Due to its volatile nature and high reactivity, isoprene plays a complex role in atmospheric chemistry and hence, climate. However, very little is known about its biological degradation in the environment. The vast majority of isoprene (500 Tg \uffc2\uffb7y-1) is produced by terrestrial plants and oil palm is considered one of the highest isoprene-producing trees, with estimated emissions of 175 \uffce\uffbcg\uffc2\uffb7g-1 dry leaves \uffc2\uffb7h-1. Oil palm is also a heavily cultivated crop since it is the source of 30% of the vegetable oil in the world and in countries such as Malaysia represents >85% of total agricultural land. The vast expansion of a single crop that emits such high amounts of isoprene have raised serious concerns about its impact on air quality and climate change. We performed DNA Stable Isotope Probing (DNA-SIP) to study the isoprene-degrading community of oil palm trees in a Malaysian plantation and identified novel genera of isoprene-utilising bacteria in both oil palm soils and leaves. isoA amplicon sequencing data also confirmed that oil palm trees harbour a novel diversity of isoA genes, which encode the alpha subunit of the isoprene monooxygenase, a key enzyme in isoprene metabolism. In addition, metagenome assembled genomes (MAGs) were reconstructed from metagenomes from oil palm soil and leaf incubations and analysed to identify isoprene degradation gene clusters in these microorganisms. Finally, analysis of unenriched metagenomes showed that isoA-containing bacteria are more abundant in soils than in the oil palm phyllosphere.

", "keywords": ["2. Zero hunger", "13. Climate action", "15. Life on land", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1099/acmi.ac2020.po0460"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Access%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1099/acmi.ac2020.po0460", "name": "item", "description": "10.1099/acmi.ac2020.po0460", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1099/acmi.ac2020.po0460"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-07-01T00:00:00Z"}}, {"id": "10.1098/rstb.2011.0313", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:18:19Z", "type": "Journal Article", "created": "2012-03-26", "title": "The Role Of N2o Derived From Crop-Based Biofuels, And From Agriculture In General, In Earth'S Climate", "description": "

In earlier work, we compared the amount of newly fixed nitrogen (N, as synthetic fertilizer and biologically fixed N) entering agricultural systems globally to the total emission of nitrous oxide (N 2 O). We obtained an N 2 O emission factor (EF) of 3\uffe2\uff80\uff935%, and applied it to biofuel production. For \uffe2\uff80\uff98first-generation\uffe2\uff80\uff99 biofuels, e.g. biodiesel from rapeseed and bioethanol from corn (maize), that require N fertilizer, N 2 O from biofuel production could cause (depending on N uptake efficiency) as much or more global warming as that avoided by replacement of fossil fuel by the biofuel. Our subsequent calculations in a follow-up paper, using published life cycle analysis (LCA) models, led to broadly similar conclusions. The N 2 O EF applies to agricultural crops in general, not just to biofuel crops, and has made possible a top-down estimate of global emissions from agriculture. Independent modelling by another group using bottom-up IPCC inventory methodology has shown good agreement at the global scale with our top-down estimate. Work by Davidson showed that the rate of accumulation of N 2 O in the atmosphere in the late nineteenth and twentieth centuries was greater than that predicted from agricultural inputs limited to fertilizer N and biologically fixed N (Davidson, E. A. 2009 Nat. Geosci . 2 , 659\uffe2\uff80\uff93662.). However, by also including soil organic N mineralized following land-use change and NO x deposited from the atmosphere in our estimates of the reactive N entering the agricultural cycle, we have now obtained a good fit between the observed atmospheric N 2 O concentrations from 1860 to 2000 and those calculated on the basis of a 4 per cent EF for the reactive N.

", "keywords": ["2. Zero hunger", "Air Pollutants", "330", "Climate", "Nitrous Oxide", "Agriculture", "15. Life on land", "Nitrification", "01 natural sciences", "7. Clean energy", "630", "Soil", "13. Climate action", "Biofuels", "Denitrification", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1098/rstb.2011.0313"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Philosophical%20Transactions%20of%20the%20Royal%20Society%20B%3A%20Biological%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1098/rstb.2011.0313", "name": "item", "description": "10.1098/rstb.2011.0313", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1098/rstb.2011.0313"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-05-05T00:00:00Z"}}, {"id": "10.1111/gcb.12819", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:18:33Z", "type": "Journal Article", "created": "2014-12-05", "title": "Soil Warming And Co2 Enrichment Induce Biomass Shifts In Alpine Tree Line Vegetation", "description": "Abstract

Responses of alpine tree line ecosystems to increasing atmospheric CO2 concentrations and global warming are poorly understood. We used an experiment at the Swiss tree line to investigate changes in vegetation biomass after 9\uffc2\uffa0years of free air CO2 enrichment (+200\uffc2\uffa0ppm; 2001\uffe2\uff80\uff932009) and 6\uffc2\uffa0years of soil warming (+4\uffc2\uffa0\uffc2\uffb0C; 2007\uffe2\uff80\uff932012). The study contained two key tree line species, Larix decidua and Pinus uncinata, both approximately 40\uffc2\uffa0years old, growing in heath vegetation dominated by dwarf shrubs. In 2012, we harvested and measured biomass of all trees (including root systems), above\uffe2\uff80\uff90ground understorey vegetation and fine roots. Overall, soil warming had clearer effects on plant biomass than CO2 enrichment, and there were no interactive effects between treatments. Total plant biomass increased in warmed plots containing Pinus but not in those with Larix. This response was driven by changes in tree mass (+50%), which contributed an average of 84% (5.7\uffc2\uffa0kg\uffc2\uffa0m\uffe2\uff88\uff922) of total plant mass. Pinus coarse root mass was especially enhanced by warming (+100%), yielding an increased root mass fraction. Elevated CO2 led to an increased relative growth rate of Larix stem basal area but no change in the final biomass of either tree species. Total understorey above\uffe2\uff80\uff90ground mass was not altered by soil warming or elevated CO2. However, Vaccinium myrtillus mass increased with both treatments, graminoid mass declined with warming, and forb and nonvascular plant (moss and lichen) mass decreased with both treatments. Fine roots showed a substantial reduction under soil warming (\uffe2\uff88\uff9240% for all roots <2\uffc2\uffa0mm in diameter at 0\uffe2\uff80\uff9320\uffc2\uffa0cm soil depth) but no change with CO2 enrichment. Our findings suggest that enhanced overall productivity and shifts in biomass allocation will occur at the tree line, particularly with global warming. However, individual species and functional groups will respond differently to these environmental changes, with consequences for ecosystem structure and functioning.

", "keywords": ["0106 biological sciences", "2. Zero hunger", "Models", " Statistical", "Temperature", "Larix", "Carbon Dioxide", "15. Life on land", "Pinus", "Global Warming", "01 natural sciences", "Soil", "Species Specificity", "13. Climate action", "Biomass", "Tundra", "Switzerland"]}, "links": [{"href": "https://doi.org/10.1111/gcb.12819"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.12819", "name": "item", "description": "10.1111/gcb.12819", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.12819"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-01-30T00:00:00Z"}}, {"id": "10.1111/gcbb.12255", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:18:37Z", "type": "Journal Article", "created": "2015-02-19", "title": "Bioenergy Harvest, Climate Change, And Forest Carbon In The Oregon Coast Range", "description": "Abstract

Forests provide important ecological, economic, and social services, and recent interest has emerged in the potential for using residue from timber harvest as a source of renewable woody bioenergy. The long\uffe2\uff80\uff90term consequences of such intensive harvest are unclear, particularly as forests face novel climatic conditions over the next century. We used a simulation model to project the long\uffe2\uff80\uff90term effects of management and climate change on above\uffe2\uff80\uff90 and belowground forest carbon storage in a watershed in northwestern Oregon. The multi\uffe2\uff80\uff90ownership watershed has a diverse range of current management practices, including little\uffe2\uff80\uff90to\uffe2\uff80\uff90no harvesting on federal lands, short\uffe2\uff80\uff90rotation clear\uffe2\uff80\uff90cutting on industrial land, and a mix of practices on private nonindustrial land. We simulated multiple management scenarios, varying the rate and intensity of harvest, combined with projections of climate change. Our simulations project a wide range of total ecosystem carbon storage with varying harvest rate, ranging from a 45% increase to a 16% decrease in carbon compared to current levels. Increasing the intensity of harvest for bioenergy caused a 2\uffe2\uff80\uff933% decrease in ecosystem carbon relative to conventional harvest practices. Soil carbon was relatively insensitive to harvest rotation and intensity, and accumulated slowly regardless of harvest regime. Climate change reduced carbon accumulation in soil and detrital pools due to increasing heterotrophic respiration, and had small but variable effects on aboveground live carbon and total ecosystem carbon. Overall, we conclude that current levels of ecosystem carbon storage are maintained in part due to substantial portions of the landscape (federal and some private lands) remaining unharvested or lightly managed.\uffc2\uffa0Increasing the intensity of harvest for bioenergy on currently harvested land, however,\uffc2\uffa0led to a relatively small reduction in the ability of forests to store carbon. Climate change is unlikely to substantially alter carbon storage in these forests, absent shifts in disturbance regimes.

", "keywords": ["0106 biological sciences", "Carbon dioxide mitigation", "Forest ecology -- Oregon -- Oregon Coast Range", "Forest biomass", "13. Climate action", "Carbon cycle (Biogeochemistry)", "Biomass energy", "Forest Biology", "15. Life on land", "01 natural sciences", "7. Clean energy", "Climatic change", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/gcbb.12255"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcbb.12255", "name": "item", "description": "10.1111/gcbb.12255", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcbb.12255"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-05-25T00:00:00Z"}}, {"id": "10.1111/j.1365-2435.2007.01247.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:18:39Z", "type": "Journal Article", "created": "2007-02-19", "title": "Drought Changes Phosphorus And Potassium Accumulation Patterns In An Evergreen Mediterranean Forest", "description": "Summary

Climate models predict more extreme weather in Mediterranean ecosystems, with more frequent drought periods and torrential rainfall. These expected changes may affect major process in ecosystems such as mineral cycling. However, there is a lack of experimental data regarding the effects of prolonged drought on nutrient cycling and content in Mediterranean ecosystems.

A 6\uffe2\uff80\uff90year drought manipulation experiment was conducted in a Quercus ilex Mediterranean forest. The aim was to investigate the effects of drought conditions expected to occur over the coming decades, on the contents and concentrations of phosphorus (P) and potassium (K) in stand biomass, and P and K content and availability in soils.

Drought (an average reduction of 15% in soil moisture) increased P leaf concentration by 18\uffc2\uffb72% and reduced P wood and root concentrations (30\uffc2\uffb79% and 39\uffc2\uffb78%, respectively) in the dominant tree species Quercus ilex, suggesting a process of mobilization of P from wood towards leaves. The decrease in P wood concentrations in Quercus ilex, together with a decrease in forest biomass growth, led to an overall decrease (by approximately one\uffe2\uff80\uff90third) of the total P content in above\uffe2\uff80\uff90ground biomass. In control plots, the total P content in the above\uffe2\uff80\uff90ground biomass increased 54\uffc2\uffa0kg\uffc2\uffa0ha\uffe2\uff88\uff921 from 1999 to 2005, whereas in drought plots there was no increase in P levels in above\uffe2\uff80\uff90ground biomass. Drought had no effects on either K above\uffe2\uff80\uff90ground contents or concentrations.

Drought increased total soil soluble P by increasing soil soluble organic P, which is the soil soluble P not directly available to plant capture. Drought reduced the ratio of soil soluble inorganic P\uffc2\uffa0:\uffc2\uffa0soil soluble organic P by 50% showing a decrease of inorganic P release from P bound to organic matter. Drought increased by 10% the total K content in the soil, but reduced the soil soluble K by 20\uffc2\uffb74%.

Drought led to diminished plant uptake of mineral nutrients and to greater recalcitrance of minerals in soil. This will lead to a reduction in P and K in the ecosystem, due to losses in P and K through leaching and erosion, if the heavy rainfalls predicted by IPCC (Intergovernmental Panel on Climate Change) models occur. As P is currently a limiting factor in many Mediterranean terrestrial ecosystems, and given that P and K are necessary for high water\uffe2\uff80\uff90use efficiency and stomata control, the negative effects of drought on P and K content in the ecosystem may well have additional indirect negative effects on plant fitness.

", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2435.2007.01247.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Functional%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2435.2007.01247.x", "name": "item", "description": "10.1111/j.1365-2435.2007.01247.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2435.2007.01247.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-02-19T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2009.02121.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:18:44Z", "type": "Journal Article", "created": "2009-12-22", "title": "Functional Changes In The Control Of Carbon Fluxes After 3 Years Of Increased Drought In A Mediterranean Evergreen Forest?", "description": "Abstract

Our objective was to test how a long\uffe2\uff80\uff90term increased water limitation affects structural and functional properties of a Mediterranean ecosystem, and how these changes modify the response of the main carbon fluxes to climatic controls. In 2003, a 27% throughfall exclusion experiment was installed in a Quercus ilex L. forest in France. Gross primary production (GPP), ecosystem respiration (RECO) and net ecosystem exchange (NEE) were estimated in a control and a dry treatment. Decreasing throughfall decreased GPP by 14% and had a smaller effect on RECO (\uffe2\uff88\uff9212%), especially soil respiration RS (\uffe2\uff88\uff9211%). Interannual variability of GPP (29%) was higher than for RECO (12%). Error propagation was used to estimates uncertainties in the NEE fluxes, which ranged from 3% to 10% in the control treatment but up to 167% for NEE in the dry treatment because more steps and data types were involved in the scaling. After 3 years of throughfall exclusion, we found no acclimation of RS to climatic drivers. Functional properties of the response of RS to soil water, temperature and rain pulse remained similar in the control and the dry treatments. A diurnal clockwise hysteresis in RS was probably controlled by canopy photosynthesis with a 3\uffe2\uff80\uff83h lag. The proportion of diurnal variation of respiration due to photosynthesis was similar in all treatments (4\uffe2\uff80\uff935%). Because of the characteristic of rain in Mediterranean climates, a continuous decrease of water input in these environments have an effect on topsoil water and consequently on RS only during short periods when rainfall is characterized by infrequent and small events that does not allow the topsoil to reach field capacity and does not allow to dry completely. However, in the longer term, we expect a stronger decrease in RS in the dry treatment driven by the decrease in GPP.

", "keywords": ["0106 biological sciences", "550", "15. Life on land", "gross primary production", "soil respiration", "01 natural sciences", "630", "6. Clean water", "Quercus ilex", "throughfall exclusion", "13. Climate action", "rain pulse", "eddy-covariance", "Q(10)", "error propagation", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2009.02121.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2009.02121.x", "name": "item", "description": "10.1111/j.1365-2486.2009.02121.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2009.02121.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-08-01T00:00:00Z"}}, {"id": "10.1111/njb.00936", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:18:56Z", "type": "Journal Article", "created": "2016-01-20", "title": "Environmental factors and ground disturbance affecting the composition of species and functional traits of ground layer lichens on grey dunes and dune heaths of Estonia", "description": "

A unique, species\uffe2\uff80\uff90rich and endangered lichen biota can be found on European coastal and inland sand dunes. However, it is increasingly affected by natural succession as well as by anthropogenic disturbances. We studied lichen diversity on the grey dunes and dune heaths of coastal and inland regions of Estonia. A total of 28 study plots were investigated; in each 0.1 ha study plot general environmental variables and anthropogenic disturbances were described and all epigeic lichen species were identified. We found 66 lichenized fungus (lichen) species, including several rare and ten red\uffe2\uff80\uff90listed lichens. Multivariate analysis (DCA, CCA) was performed to examine gradients in species composition and to relate variation in species data to environmental factors. In addition, we used redundancy analysis (RDA) to relate variation in species\uffe2\uff80\uff99 trait composition to environmental factors. Species composition on grey dunes differed significantly from that on dune heaths. The characteristic species for grey dunes are, besides several Cladonia species, foliose lichens, e.g. Hypogymnia physodes, Parmelia sulcata and Peltigera spp. Also species\uffe2\uff80\uff99 traits composition was different for either habitat, indicating that sorediate lichens, foliose lichens, lichens with cyanobacterium as the main photobiont, and sparsely branched Cladonia species dominate on grey dunes, while esorediate, green\uffe2\uff80\uff90algal, crustose and richly branched fruticose lichens are common on dune heaths. Soil pH was the most essential environmental variable for determining both species composition and species\uffe2\uff80\uff99 traits composition. The composition of lichen species was also significantly influenced by forest closeness, soil Mg content and cover of bare sand; the effect of ground disturbances was low compared to the effect of these environmental factors. To protect and conserve the species\uffe2\uff80\uff90rich lichen biota, it is necessary to protect the dune habitats from building activity, to avoid overtrampling in recreation areas and to regularly remove shrubs and trees. Crop and land management practices affect both the quality and quantity of soil organic matter (SOM) and hence are driving forces for soil organic carbon (SOC) sequestration. The objective of this study was to assess the long\uffe2\uff80\uff90term effects of tillage, fertilizer application and crop rotation onSOCin an agricultural area of southern Norway, where a soil fertility and crop rotation experiment was initiated in 1953 and a second experiment on tillage practices was initiated in 1983. The first experiment comprised 6\uffe2\uff80\uff90yr crop rotations with cereals only and 2\uffe2\uff80\uff90yr cereal and 4\uffe2\uff80\uff90yr grass rotations with recommended (base) and more than the recommended (above base) fertilizer application rates; the second experiment dealt with autumn\uffe2\uff80\uff90ploughed (conventional\uffe2\uff80\uff90till) plots and direct\uffe2\uff80\uff90drilled plots (no\uffe2\uff80\uff90till). Soil samples at 0\uffe2\uff80\uff9310 and 10\uffe2\uff80\uff9330\uffc2\uffa0cm depths were collected in autumn 2009 and analysed for their C and N contents. The quality ofSOMin the top layer was determined by13C solid\uffe2\uff80\uff90stateNMRspectroscopy. TheSOCstock did not differ significantly because of rotation or fertilizer application types, even after 56\uffc2\uffa0yr. However, the no\uffe2\uff80\uff90till system showed a significantly higherSOCstock than the conventional\uffe2\uff80\uff90till system at the 0\uffe2\uff80\uff9310\uffc2\uffa0cm depth after the 26\uffc2\uffa0yr of experiment, but it was not significantly different at the 10\uffe2\uff80\uff9330\uffc2\uffa0cm depth. In terms of quality,SOMwas found to differ by tillage type, rate of fertilizer application and crop rotation. The no\uffe2\uff80\uff90till system showed an abundance of O\uffe2\uff80\uff90alkyl C, while conventional\uffe2\uff80\uff90till system indicated an apparently indirect enrichment in alkyl C, suggesting a more advanced stage ofSOMdecomposition. The long\uffe2\uff80\uff90term quantitative and qualitative effects onSOMsuggest that adopting a no\uffe2\uff80\uff90tillage system and including grass in crop rotation and farmyard manure in fertilizer application may contribute to preserve soil fertility and mitigate climate change.

", "keywords": ["Fertilizer application", "2. Zero hunger", "Crop rotation", " fertilizer application", " soil organic carbon (SOC)", " soil organic matter (SOM)", " tillage", " NMR spectroscopy.", "NMR spectroscopy", "Crop rotation", "Soil organic matter (SOM)", "13. Climate action", "Soil organic carbon (SOC)", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Tillage"]}, "links": [{"href": "https://doi.org/10.1111/sum.12198"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Use%20and%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/sum.12198", "name": "item", "description": "10.1111/sum.12198", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/sum.12198"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-07-31T00:00:00Z"}}, {"id": "10.1139/x08-045", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:19:06Z", "type": "Journal Article", "created": "2008-06-27", "title": "Impact Of A Pine Lappet (Dendrolimus Pini) Mass Outbreak On C And N Fluxes To The Forest Floor And Soil Microbial Properties In A Scots Pine Forest In Germany", "description": "

Herbivorous insect infestations significantly alter element and nutrient cycling in forests, thus directly and indirectly affecting ecosystem functioning. In this paper, we report on the herbivore-mediated transfer of carbon (C) and nitrogen (N) from the canopy to the forest floor and its influence on soil microbial activity during a pine lappet ( Dendrolimus pini L.) infestation. Over the course of 6\uffc2\uffa0months, we followed C and N fluxes in bulk deposition, throughfall, and green fall (green needle debris dropped during herbivory) together with solid frass (insect faeces) in an 80-year-old Scots pine ( Pinus silvestris L.) forest. Compared with the control, herbivore defoliation significantly doubled throughfall inputs of total and dissolved organic C and N over the study period. Frass plus green-fall C and N fluxes peaked in June\uffe2\uff80\uff93July at 110\uffc2\uffa0kg C\uffc2\uffb7ha\uffe2\uff80\uff931and 2.3\uffc2\uffa0kg N\uffc2\uffb7ha\uffe2\uff80\uff931, respectively. Randomized intervention analysis revealed no significant effects of herbivory on soil microbial properties, except for adenylate energy charge, which showed slightly higher values under herbivory. This study demonstrates the importance of canopy herbivory on overall C and N inputs to forest ecosystems, particularly in altering the timing and quality of the organic material reaching the forest floor and potentially affecting belowground processes.

", "keywords": ["0106 biological sciences", "2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "le Mellec, Anne, Michalzik, Beate,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1139/x08-045"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Canadian%20Journal%20of%20Forest%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1139/x08-045", "name": "item", "description": "10.1139/x08-045", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1139/x08-045"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-07-01T00:00:00Z"}}, {"id": "10.11591/.v3i4.4696", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:19:09Z", "type": "Journal Article", "created": "2019-11-04", "title": "Factors associated with Institutional delivery in Boricha district of Sidama zone, southern Ethiopia", "description": "

<p style='color: #000000; font-family: Verdana, Arial, Helvetica, sans-serif; font-size: 10px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: 2; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration-style: initial; text-decoration-color: initial;'>Every year, 40 million women give birth at home without the help of a<br />skilled birth attendant. In 2011, 287,000 women died during pregnancy or childbirth. Almost all these deaths occur in developing countries where mothers and children lack access to basic health care. Reports showed the low utilization of health facility for delivery service in Ethiopia. This study aimed to determine the utilization and factors influencing institutional delivery. Community based cross sectional study was conducted from January to February 2013/14 in Boricha District of Southern Ethiopia among mothers who gave birth in the last 1 year. Multistage sampling techniques were used to collect data from 546 mothers. Taking in to account place of birth for the last child, only 4.9% women gave birth in a health facility. Women\u2019s education level (AOR=4.4 (95% CI=1.36-14.33)), timing of firstANC visit (AOR= .03 (95% CI=0.004 - 0.205)), women\u2019s advice to deliver in a health facility during ANC (AOR = 31.15 (95% CI=2.02-479.52)), women\u2019s knowledge of birth related complications (AOR= 12.4 (95% CI=2.67-57.16)) and decision making power (AOR=0.2 (95% CI=0.060.82)) showed significant association with institutionional delivery. Institutional delivery in the study area was found to be very low. Raising\u00a0awareness on institutional delivery to maximize delivery service utilization and strengthening provision of education and counseling to deliver in health facility during antenatal care visits at individual and community level should be given due emphasis.</p>

", "keywords": ["2. Zero hunger", "03 medical and health sciences", "0302 clinical medicine", "1. No poverty", "3. Good health"]}, "links": [{"href": "https://doi.org/10.11591/.v3i4.4696"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/International%20Journal%20of%20Public%20Health%20Science%20%28IJPHS%29", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.11591/.v3i4.4696", "name": "item", "description": "10.11591/.v3i4.4696", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.11591/.v3i4.4696"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-12-01T00:00:00Z"}}, {"id": "10.1186/s12302-025-01141-6", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:19:12Z", "type": "Journal Article", "created": "2025-06-15", "title": "Investigating the extent of PFAS contamination in the Upper Danube Basin across environmental compartments", "description": "Abstract Background

Per- and polyfluoroalkyl substances (PFAS) are emerging organic pollutants widely detected in environmental systems, posing risks to human health and the ecosystem. Despite increasing efforts to monitor PFAS in river systems, knowledge gaps remain regarding sources and emissions via different pathways. This study investigates PFAS contamination across multiple environmental compartments in the Upper Danube Basin, including surface water, groundwater, wastewater, landfill leachate, surface runoff, and atmospheric deposition. The primary objectives are to assess the extent of PFAS contamination, identify key emission sources and transport pathways, and evaluate associated risks in terms of the potential exceedance of current and proposed environmental regulatory thresholds in the European Union.

Results

The findings reveal a widespread presence of PFAS, with PFOA, PFOS and short-chain compounds being predominant. The Alz River and Gendorf chemical park emerge as hotspots with far-reaching effects downstream, contributing significantly to diffuse legacy contamination of PFOA and being a significant source of two industrial PFOA substitutes, ADONA and GenX. Wastewater treatment plants, old municipal landfills, and sites with a history of fire-fighting foam application are identified as key pathways or sources of legacy pollution, exhibiting higher concentrations compared to the other matrices. Notably, no significant removal is observed when comparing influent and effluent samples from conventional WWTPs. The study further demonstrates that groundwater is vulnerable to contamination from point sources and to infiltration from rivers, with bank filtration proving largely ineffective in preventing PFAS contamination.

Conclusions

The study underscores the necessity for source and pathway control measures to mitigate PFAS pollution, the implementation of advanced treatment technologies to safeguard drinking water and surface water quality, and targeted remediation for legacy soil and groundwater contamination. Additionally, strong use regulations should be explored to minimize ongoing emissions. The multi-compartment monitoring proves to be a crucial approach to understand the complexity of PFAS distribution at the catchment scale. Comparative analysis and risk assessment highlight challenging situations for water management, offering an indispensable basis for emission modeling as a next step for quantitative assessment of the relevance of different sources and pathways for surface water pollution.

", "keywords": ["Emerging contaminants", "Emerging Pollutants", "PFAS", "Source identification", "Watershed management", "Environmental sciences", "Emission", "Water Framework Directive", "Environmental law", "Water pollution", "GE1-350", "K3581-3598", "Catchment monitoring", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.1186/s12302-025-01141-6"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Sciences%20Europe", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1186/s12302-025-01141-6", "name": "item", "description": "10.1186/s12302-025-01141-6", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1186/s12302-025-01141-6"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-06-15T00:00:00Z"}}, {"id": "10.17026/dans-z8z-5t4e", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:19:39Z", "type": "Dataset", "title": "Consumers' attitudes towards microbial applications in food production", "description": "The data was collected using an online survey as part of the research activities of the European Horizon 2020 project SIMBA (Sustainable Innovation of Microbiome Applications in the Food System). Online surveys were used to collect consumer respondent data for three food products (wheat bread, consumer potatoes and tomato sauce). These food products were selected as part of the EU Horizon 2020 SIMBA project for reflecting the diversity of food value chains in terms of organisation, technology, climatic conditions and consumption patterns across the EU. Three questionnaires corresponding to the three food products were prepared. The questionnaires consisted of four main parts: (1) socio-demographic characteristics (e.g. gender, education, income; Part One), (2) health and environmental concerns related to chemical use in farming, knowledge about microbial applications, perceived microbial health risks and attitude towards microbial applications in food production (Part Two), (3) questions for eliciting a consumer\u2019s willingness-to-pay (WTP) for a food product that had been obtained through a microbial-enhanced production system with reduced or no chemical use (Part Three), and (4) questions for eliciting a respondent\u2019s food choice motives (FCMs) using de Boer et al.\u2019s (2007) FCM questionnaire (Part Four). In addition, the questionnaire had an introduction section containing information sheet about the study and a consent form. The consent form and the information sheet for safeguarding the ethical aspects of this study (e.g. data handling, privacy and potential risks to respondents) were approved by the General Assembly of the SIMBA project as well as the Social Sciences Ethics Committee of Wageningen University prior to distributing the surveys. We collected data primarily from three countries: Germany, Italy and Netherlands.The data was collected to undertake a study to support the uptake of food products that are produced and/or processed using microbial applications. The aim of the survey was to get some insights about food choice motives of consumers, and the socio-demographic and behavioural factors influencing their food choices. The survey specifically aimed to assess the preferences and perceptions, and willingness-to-pay of consumers to wheat, potato and tomato-based food products that are produced and/or processed using microbial applications.", "keywords": ["2. Zero hunger", "13. Climate action", "Economics", "Social and Behavioural Sciences", "Business and Management", "Food economics", "12. Responsible consumption"], "contacts": [{"organization": "BM Ali", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.17026/dans-z8z-5t4e"}, {"rel": "self", "type": "application/geo+json", "title": "10.17026/dans-z8z-5t4e", "name": "item", "description": "10.17026/dans-z8z-5t4e", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.17026/dans-z8z-5t4e"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.18174/509232", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:19:43Z", "type": "Report", "created": "2020-03-16", "title": "Novel soil quality indicators for the evaluation of agricultural management practices: a biological perspective", "description": "Developments in soil biology and methods to characterize soil organic carbon have the potential to deliver novel soil quality indicators that can help to identify soil management practices that sustain soil productivity and environmental resilience. This thesis aimed at investigating the suitability of a range of soil biological and biochemical parameters as novel soil quality indicators for agricultural management. The soil parameters, selected through a literature review, comprised different labile organic carbon fractions (hydrophilic dissolved organic carbon (Hy-DOC), dissolved organic carbon (DOC), permanganate oxidizable carbon (POXC), hot water extractable carbon (HWEC) and particulate organic matter carbon (POMC), ordered here from the smallest to the largest proportion of the total organic carbon), soil disease suppressiveness measured with a Pythium-Cress bioassay, nematode communities characterized with amplicon sequencing and qPCR, and microbial community level physiological profiling (CLPP) measured with MicroRespTM. We tested the sensitivity of the novel indicators to tillage and organic matter addition in 10 European long-term field experiments, and assessed their relationship with already existing soil quality indicators linked to soil functioning. Lastly, the results of these experimental chapters are interpreted relative to each other and to the broader body of literature on soil quality assessments. Moreover, pros and cons of the novel indicators are discussed, and possibilities and needs for future research are outlined. Reduced tillage increased carbon availability, disease suppressiveness, nematode richness and diversity, the stability and maturity of the food web, and microbial activity and functional diversity. Organic matter addition had a weaker role in sustaining soil quality, possibly due to the different compositions of the organic matter inputs in the long-term field experiments that were sampled. Random forest analysis showed that POXC was the indicator that discriminates soil management most, and structural equation modelling showed its central role in nutrient cycling, carbon sequestration, biodiversity conservation, erosion control and disease regulation/suppression. The novel indicators proposed here have great potential to improve existing soil quality assessment schemes, but their usefulness is still to be validated and optimized.", "keywords": ["2. Zero hunger", "13. Climate action", "Life Science", "15. Life on land"], "contacts": [{"organization": "Bongiorno, Giulia", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.18174/509232"}, {"rel": "self", "type": "application/geo+json", "title": "10.18174/509232", "name": "item", "description": "10.18174/509232", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.18174/509232"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-16T00:00:00Z"}}, {"id": "10.20381/ruor-18782", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:19:48Z", "created": "2008-01-01", "description": "Numerous forest fires occurred during the summer of 2004 in the Klondike Goldfields region of the Yukon Territory, an area of extensive discontinuous permafrost. More than 35 shallow detachment failure landslides developed in subsequent weeks in Steele Creek, a small drainage basin located about 60 km south of Dawson City. Preliminary observations of the failures and near-surface thermal regime were made through freeze-up of 2004 and continued in the summers of 2005 and 2006. Detachment failures were mapped and individual sites were surveyed. Air and ground temperatures were measured in burned and unburned areas. In addition, two-dimensional DC resistivity transects were used to examine subsurface conditions in the area. Forest fire contributed to detachment failure activity on permafrost slopes by destroying the surface organic mat, causing burned surface temperatures to rise, thawing active layers by up to 20 cm (+31%) deeper than unburned slopes and weakening the surface root structures. Deeper thaw melted transient layer ground ice, raising soil porewater pressures. The thermal differences between burned and unburned sites were greater at the north-facing than south-facing sites, and active layer freezing and thawing processes varied according to both aspect and burned status. More southerly-facing and/or burned sites generally thawed earlier, refroze later and had warmer temperatures than more northerly and/or unburned sites. Thaw of burned areas with high ground surface temperatures can be expected to continue, depending on climatic conditions, until sufficient revegetation occurs to shade the surface and rebuild the insulating organic mat. The detachment failures occurred from a few weeks to two years after forest fire, and only on slopes where permafrost was extensive. They were not similar to others in the literature in that almost all occurred in coarse-gained soils and had failure planes elevated above the permafrost table. These landslides were flow-type failures that rafted portions of the organic mat on top of deforming, non-cohesive sediment. They occurred in areas of deeper thaw but their distribution and the resistivity data suggest that they were associated with supra-permafrost taliks which concentrated groundwater flow. In an unglaciated area like the Klondike region this landsliding process has likely occurred thousands of times during the Pleistocene and may be responsible for elements of the form of the region's slopes. Predicted increases in the frequency and magnitude of forest fire in the boreal forest due to warming climates may increase incidence of these types of failures.", "keywords": ["Ecology", "Physical Geography", "550", "13. Climate action", "Forestry and Wildlife", "Physical Geography.", "Agriculture", "15. Life on land", "Biology", " Ecology.", "Biology", "Agriculture", " Forestry and Wildlife."], "contacts": [{"organization": "Coates, James", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.20381/ruor-18782"}, {"rel": "self", "type": "application/geo+json", "title": "10.20381/ruor-18782", "name": "item", "description": "10.20381/ruor-18782", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.20381/ruor-18782"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-01-01T00:00:00Z"}}, {"id": "10.2136/sssaj2007.0248", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:20:09Z", "type": "Journal Article", "created": "2008-05-30", "title": "Long-Term Effects Of Harvesting Maize Stover And Tillage On Soil Quality", "description": "

Rising concerns about greenhouse gases, increased fuel prices, and the potential for new high value agricultural products have raised interest in the use of maize stover for bioenergy production. However, residue harvest must be weighed against potential negative impacts on soil quality. This study, conducted in Chazy, NY, evaluated the long\uffe2\uff80\uff90term effects of 32 yr of maize (Zea maysL.) stover harvest vs. stover return on soil quality in the surface layer (5\uffe2\uff80\uff9366 mm) under plow till (PT) and no\uffe2\uff80\uff90till (NT) systems on a Raynham silt loam (coarse\uffe2\uff80\uff90silty, mixed, active, nonacid, mesic Aeric Epiaquept) using physical, chemical, and biological soil properties as soil quality indicators. Twenty\uffe2\uff80\uff90five soil properties were measured, including standard chemical soil tests, aggregate stability (WSA), bulk density, (\uffcf\uff81b) penetration resistance (PR), saturated hydraulic conductivity (Ks), infiltrability (Infilt), several porosity indicators (aeration pores(PO > 1000), soil water potential = \uffce\uffa8 > \uffe2\uff88\uff920.36 kPa; air\uffe2\uff80\uff90filled pores at field capacity (PO > 30), \uffce\uffa8 > \uffe2\uff88\uff9210kPa; available water capacity (AWC), \uffe2\uff88\uff921500 < \uffce\uffa8 < \uffe2\uff88\uff9210 kPa), total organic matter (OM), parasitic (Nemparasitic) and beneficial nematode (Nembeneficial) populations, decomposition rate (Decomp), potentially mineralizable N (PMN) and easily extractable (EEG) and total glomalin (TG). Only eight indicators were adversely affected by stover harvest, and most of these effects were significant only under NT. Almost all indicators affected by stover removal were affected equally or more adversely by tillage. A total of 15 indicators were adversely affected by tillage. Results of this study suggest that, on a silt loam soil in a temperate climate, long\uffe2\uff80\uff90term stover harvest had lower adverse impacts on soil quality than long\uffe2\uff80\uff90term tillage. Stover harvest appears to be sustainable when practiced under NT management.

", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.2136/sssaj2007.0248"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Science%20Society%20of%20America%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2136/sssaj2007.0248", "name": "item", "description": "10.2136/sssaj2007.0248", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2136/sssaj2007.0248"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-07-01T00:00:00Z"}}, {"id": "10.33140/jgrm.07.02.03", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-26T16:20:29Z", "type": "Journal Article", "created": "2023-05-31", "title": "Risk-Reducing Salpingectomy And Other Strategies For Prevention Of Ovarian And Tubal Carcinoma", "description": "

Objective: To provide a review of most current evidence and data for risk-reducing strategies used in prevention of ovarian cancer. Methods of study selection: PubMed was used as a search tool for articles with key words focusing on current strategies on prevention of ovarian cancer such as \u201crisk-reducing salpingectomy, \u201crisk-reducing salpingo-oophorectomy, \u201csalpingectomy with delayed oophorectomy\u201d. General consensus and society guidelines from leading organizations such as Society of Gynecologic Oncology, American Cancer Society, and American College of Obstetricians and Gynecologists were reviewed and summarized in this review article with supporting evidence and research studies on most current riskreduction strategies for prevention of ovarian and tubal carcinoma. Result: There is growing evidence that high-grade serous ovarian carcinoma arises in the fallopian tube in the form of serous tubal intraepithelial carcinoma (STIC). Therefore, opportunistic salpingectomy has been increasingly offered at the time of routine benign gynecologic surgery. Risk-reducing bilateral salpingo-oophorectomy has been shown to reduce risk of ovarian cancer up to 90% and offered to women with high hereditary predisposition for ovarian cancer. Riskreducing salpingectomy with delayed oophorectomy (SDO) has been suggested in younger women to balance the effects of infertility and surgically induced menopause resulting from oophorectomy. Conclusion: Combined oral Contraceptive COCs confer long-term protection against ovarian cancer with reported 20% reduction for every 5 years of use, which have been cited as a confounding factor in most of the published studies. Women who used HRT (estrogen alone or combined estrogen and progesterone) carry 20% higher risk of ovarian cancer compared to never-users. The associated increased risk of cervical and breast cancer with COCs/HTR use, have recently let women prefer the RRSO over COCs for prevention of ovarian cancer. Bilateral risk reducing Salpingo-oophorectomy (RRSO) at the age of 40\u201345 in BRCA1 and 45\u201350 in BRCA2 mutation carriers is recommended to be the primary approach for risk reduction of ovarian cancer. There is well-supported evidence of lowering the risk of ovarian cancer in high-risk population by 90%. The American college of obstetrics and gynecology committee opinion, recommended opportunistic salpingectomy for the primary prevention of ovarian cancer in a woman already undergoing pelvic surgery for another indication. Bilateral salpingectomy at the time of cesarean delivery is recommended to replace the tubal ligation as the method of choice for sterilization performed with cesarean delivery. The novel alternative procedure of Risk-reducing Salpingectomy with delayed risk-reducing oophorectomy (RRSO-RRO) have growing attention as a better alternative to improve the menopause-related morbidity and quality of life.

", "keywords": ["3. Good health"]}, "links": [{"href": "https://doi.org/10.33140/jgrm.07.02.03"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Gynecology%20%26amp%3B%20Reproductive%20Medicine", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.33140/jgrm.07.02.03", "name": "item", "description": "10.33140/jgrm.07.02.03", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.33140/jgrm.07.02.03"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-04-17T00:00:00Z"}}, {"id": "10.3389/fbioe.2019.00378", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-26T16:20:30Z", "type": "Journal Article", "created": "2019-12-04", "title": "Thickness of Polyelectrolyte Layers of Separately Confined Bacteria Alters Key Physiological Parameters on a Single Cell Level", "description": "Confinement of bacterial cells in a matrix or in capsules is an integral part of many biotechnological applications. Here, the well-known layer-by-layer method of deposition of a polyelectrolyte film a few nanometers in thickness to confine separated bacterial cells in permeable and physically durable shells has been examined. Due to the physical properties of such a confinement, we found that this method enables investigation of effects of physical barriers against mass gain and cell division. Using the method of time-lapse confocal microscopy, we observed a prolonged lag phase, dependent on the number of polyelectrolyte layers. In the confinement, both the GFP fluorescent signal from the leaking T7 promoter and the cell size were increased by factors of more than five and two, respectively. This creates a paradigm shift that enables use of mechanical entrapment for control of bacterial cell physiology and opens possibilities of controlling the division rate as well as gene expression. These effects can be attributed to the perturbation of the sensing of the cell size, which results in disproportional synthesis of a cell envelope impinging the intracellular material and compels cells to grow rapidly. In addition, the charged surface of cells enables prolonged intercellular physical interaction and results in spherically shaped microcolonies.", "keywords": ["polyelectrolytes", "0301 basic medicine", "0303 health sciences", "03 medical and health sciences", "layer-by-layer encapsulation", "time-lapse confocal microscopy", " polyelectrolytes", " layer-by-layer encapsulation", " electrostatic interactions", " cell surface modification", "cell surface modification", "Bioengineering and Biotechnology", "electrostatic interactions", "time-lapse confocal microscopy", "TP248.13-248.65", "Biotechnology"]}, "links": [{"href": "https://doi.org/10.3389/fbioe.2019.00378"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Bioengineering%20and%20Biotechnology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fbioe.2019.00378", "name": "item", "description": "10.3389/fbioe.2019.00378", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fbioe.2019.00378"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-04T00:00:00Z"}}, {"id": "10.3389/fmicb.2016.01446", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-26T16:20:32Z", "type": "Journal Article", "created": "2016-09-14", "description": "Soil management is fundamental to all agricultural systems and fertilization practices have contributed substantially to the impressive increases in food production. Despite the pivotal role of soil microorganisms in agro-ecosystems, we still have a limited understanding of the complex response of the soil microbiota to organic and mineral fertilization in the very long-term. Here, we report the effects of different fertilization regimes (mineral, organic and combined mineral and organic fertilization), carried out for more than a century, on the structure and activity of the soil microbiome. Organic matter content, nutrient concentrations, and microbial biomass carbon were significantly increased by mineral, and even more strongly by organic fertilization. Pyrosequencing revealed significant differences between the structures of bacterial and fungal soil communities associated to each fertilization regime. Organic fertilization increased bacterial diversity, and stimulated microbial groups (Firmicutes, Proteobacteria, and Zygomycota) that are known to prefer nutrient-rich environments, and that are involved in the degradation of complex organic compounds. In contrast, soils not receiving manure harbored distinct microbial communities enriched in oligotrophic organisms adapted to nutrient-limited environments, as Acidobacteria. The fertilization regime also affected the relative abundances of plant beneficial and detrimental microbial taxa, which may influence productivity and stability of the agroecosystem. As expected, the activity of microbial exoenzymes involved in carbon, nitrogen, and phosphorous mineralization were enhanced by both types of fertilization. However, in contrast to comparable studies, the highest chitinase and phosphatase activities were observed in the solely mineral fertilized soil. Interestingly, these two enzymes showed also a particular high biomass-specific activities and a strong negative relation with soil pH. As many soil parameters are known to change slowly, the particularity of unchanged fertilization treatments since 1902 allows a profound assessment of linkages between management and abiotic as well as biotic soil parameters. Our study revealed that pH and TOC were the majors, while nitrogen and phosphorous pools were minors, drivers for structure and activity of the soil microbial community. Due to the long-term treatments studied, our findings likely represent permanent and stable, rather than transient, responses of soil microbial communities to fertilization.", "keywords": ["Soil nutrients", "0301 basic medicine", "2. Zero hunger", "0303 health sciences", "long-term fertilization", "microbial biomass", "15. Life on land", "microbial activity", "Microbiology", "QR1-502", "03 medical and health sciences", "13. Climate action", "soil microbial communities", "soil nutrients", "454 pyrosequencing"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2016.01446"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2016.01446", "name": "item", "description": "10.3389/fmicb.2016.01446", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2016.01446"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-14T00:00:00Z"}}, {"id": "10.3389/fmicb.2019.02597", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-26T16:20:33Z", "type": "Journal Article", "created": "2019-11-08", "title": "New Insights Into Cinnamoyl Esterase Activity of Oenococcus oeni.", "description": "Some strains of Oenococcus oeni possess cinnamoyl esterase activity that can be relevant in the malolactic stage of wine production liberating hydroxycinnamic acids that are precursors of volatile phenols responsible for sensory faults. The objective of this study was to better understand the basis of the differential activity between strains. After initial screening, five commercial strains of O. oeni were selected, three were found to exhibit cinnamoyl esterase activity (CE+) and two not (CE-). Although the use of functional annotation of genes revealed genotypic variations between the strains, no specific genes common only to the three CE+ strains could explain the different activities. Pasteurized wine was used as a natural source of tartrate esters in growth and metabolism experiments conducted in MRS medium, whilst commercial trans-caftaric acid was used as substrate for enzyme assays. Detoxification did not seem to be the main biological mechanism involved in the activity since unlike its phenolic cleavage products and their immediate metabolites (trans-caffeic acid and 4-ethylcatechol), trans-caftaric acid was not toxic toward O. oeni. In the case of the two CE+ strains OenosTM and CiNeTM, wine-exposed samples showed a more rapid degradation of trans-caftaric acid than the unexposed ones. The CE activity was present in all cell-free extracts of both wine-exposed and unexposed strains, except in the cell-free extracts of the CE- strain CH11TM. This activity may be constitutive rather than induced by exposure to tartrate esters. Trans-caftaric acid was totally cleaved to trans-caffeic acid by cell-free extracts of the three CE+ strains, whilst cell-free extracts of the CE- strain CH16TM showed significantly lower activity, although higher for the strains in experiments with no prior wine exposure. The EstB28 esterase gene, found in the genomes of the 5 strains, did not reveal any difference on the upstream regulation and transport functionality between the strains. This study highlights the complexity of the basis of this activity in wine related O. oeni population. Variable cinnamoyl esterases or/and membrane transport activities in the O. oeni strains analyzed and a possible implication of wine molecules could explain this phenomenon.", "keywords": ["0301 basic medicine", "0303 health sciences", "tartrate esters", "cinnamoyl esterase", "Tartrate esters", "Hydroxycinnamic acids", "Wine", "hydroxycinnamic acids", "[SDV.IDA] Life Sciences [q-bio]/Food engineering", "Microbiology", "QR1-502", "03 medical and health sciences", "Cinnamoyl esterase", "wine", "Oenococcus oeni"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2019.02597"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2019.02597", "name": "item", "description": "10.3389/fmicb.2019.02597", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2019.02597"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-11-08T00:00:00Z"}}, {"id": "10.3389/fpls.2017.01892", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-26T16:20:36Z", "type": "Journal Article", "created": "2017-11-06", "title": "Variability in Susceptibility to Anthracnose in the World Collection of Olive Cultivars of Cordoba (Spain)", "description": "Anthracnose of olive (Olea europaea ssp. europaea L.), caused by Colletotrichum species, is a serious disease causing fruit rot and branch dieback, whose epidemics are highly dependent on cultivar susceptibility and environmental conditions. Over a period of 10 years, there have been three severe epidemics in Andalusia (southern Spain) that allowed us to complete the assessment of the World Olive Germplasm Bank of C\u00f3rdoba, one of the most important cultivar collections worldwide.A total of 308 cultivars from 21 countries were evaluated, mainly Spain (174 cvs.), Syria (29 cvs.), Italy (20 cvs.), Turkey (15 cvs.), and Greece (16 cvs.). Disease assessments were performed using a 0-10 rating scale, specifically developed to estimate the incidence of symptomatic fruit in the tree canopy. Also, the susceptibility of five reference cultivars was confirmed by artificial inoculation. Because of the direct relationship between the maturity of the fruit and their susceptibility to the pathogen, evaluations were performed at the end of fruit ripening, which forced coupling assessments according to the maturity state of the trees. By applying the cluster analysis to the 308 cultivars, these were classified as follows: 66 cvs. highly susceptible (21.4%), 83 cvs. susceptible (26.9%), 66 cvs. moderately susceptible (21.4%), 61 cvs. resistant (19.8%), and 32 cvs. highly resistant (10.4%). Representative cultivars of these five categories are 'Ocal,' 'Lech\u00edn de Sevilla,' 'Arbequina,' 'Picual,' and 'Frantoio,' respectively. With some exceptions, such as cvs. Arbosana, Empeltre and Picual, most of the Spanish cultivars, such as 'Arbequina,' 'Cornicabra,' 'Hojiblanca,' 'Manzanilla de Sevilla,' 'Morisca,' 'Picudo,' 'Farga,' and 'Verdial de Hu\u00e9var' are included in the categories of moderately susceptible, susceptible or highly susceptible. The phenotypic evaluation of anthracnose reaction is a limiting factor for the selection of olive cultivars by farmers, technicians, and breeders.", "keywords": ["0301 basic medicine", "2. Zero hunger", "anthracnose", "0303 health sciences", "Plant culture", "Plant Science", "15. Life on land", "16. Peace & justice", "olive", "diseases", "SB1-1110", "03 medical and health sciences", "fruit rot", "Colletotrichum"], "contacts": [{"organization": "J. R. Viruega, Luis F. Roca, Carlos Xavi\u00e9r, Juan Caballero, Antonio Trapero, Juan Moral, Juan Moral,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.3389/fpls.2017.01892"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fpls.2017.01892", "name": "item", "description": "10.3389/fpls.2017.01892", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fpls.2017.01892"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-11-06T00:00:00Z"}}, {"id": "10.3389/fmicb.2022.983823", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-26T16:20:35Z", "type": "Journal Article", "created": "2022-11-08", "title": "Long-term effects of early-life rumen microbiota modulation on dairy cow production performance and methane emissions", "description": "

Rumen microbiota modulation during the pre-weaning period has been suggested as means to affect animal performance later in life. In this follow-up study, we examined the post-weaning rumen microbiota development differences in monozygotic twin-heifers that were inoculated (T-group) or not inoculated (C-group) (n\uffe2\uff80\uff89=\uffe2\uff80\uff894 each) with fresh adult rumen liquid during their pre-weaning period. We also assessed the treatment effect on production parameters and methane emissions of cows during their 1st lactation period. The rumen microbiota was determined by the 16S rRNA gene, 18S rRNA gene, and ITS1 amplicon sequencing. Animal weight gain and rumen fermentation parameters were monitored from 2 to 12\uffe2\uff80\uff89months of age. The weight gain was not affected by treatment, but butyrate proportion was higher in T-group in month 3 (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.04). Apart from archaea (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.084), the richness of bacteria (p\uffe2\uff80\uff89&lt;\uffe2\uff80\uff890.0001) and ciliate protozoa increased until month 7 (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.004) and anaerobic fungi until month 11 (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.005). The microbiota structure, measured as Bray\uffe2\uff80\uff93Curtis distances, continued to develop until months 3, 6, 7, and 10, in archaea, ciliate protozoa, bacteria, and anaerobic fungi, respectively (for all: p\uffe2\uff80\uff89=\uffe2\uff80\uff890.001). Treatment or age \uffc3\uff97 treatment interaction had a significant (p\uffe2\uff80\uff89&lt;\uffe2\uff80\uff890.05) effect on 18 bacterial, 2 archaeal, and 6 ciliate protozoan taxonomic groups, with differences occurring mostly before month 4 in bacteria, and month 3 in archaea and ciliate protozoa. Treatment stimulated earlier maturation of prokaryote community in T-group before month 4 and earlier maturation of ciliate protozoa at month 2 (Random Forest: 0.75\uffe2\uff80\uff89month for bacteria and 1.5\uffe2\uff80\uff89month for protozoa). No treatment effect on the maturity of anaerobic fungi was observed. The milk production and quality, feed efficiency, and methane emissions were monitored during cow\uffe2\uff80\uff99s 1st lactation. The T-group had lower variation in energy-corrected milk yield (p\uffe2\uff80\uff89&lt;\uffe2\uff80\uff890.001), tended to differ in pattern of residual energy intake over time (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.069), and had numerically lower somatic cell count throughout their 1st lactation period (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.081), but no differences between the groups in methane emissions (g/d, g/kg DMI, or g/kg milk) were observed. Our results demonstrated that the orally administered microbial inoculant induced transient changes in early rumen microbiome maturation. In addition, the treatment may influence the later production performance, although the mechanisms that mediate these effects need to be further explored.

", "keywords": ["microbiome modulation", "0301 basic medicine", "570", "ta412", "microbiome establishment", "Heifer", "dairy cow", "Rumen function", "Animal science", " dairy science", "Microbiology", "630", "Microbiome modulation", "QR1-502", "rumen function", "Microbiome establishment", "03 medical and health sciences", "Dairy cow", "heifer"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2022.983823"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2022.983823", "name": "item", "description": "10.3389/fmicb.2022.983823", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2022.983823"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-08T00:00:00Z"}}, {"id": "10.3389/fpls.2019.00191", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:20:36Z", "type": "Journal Article", "created": "2019-02-22", "title": "Interannual and Seasonal Dynamics of Volatile Organic Compound Fluxes From the Boreal Forest Floor", "description": "In the northern hemisphere, boreal forests are a major source of biogenic volatile organic compounds (BVOCs), which drive atmospheric processes and lead to cloud formation and changes in the Earth's radiation budget. Although forest vegetation is known to be a significant source of BVOCs, the role of soil and the forest floor, and especially interannual variations in fluxes, remains largely unknown due to a lack of long-term measurements. Our aim was to determine the interannual, seasonal and diurnal dynamics of boreal forest floor volatile organic compound (VOC) fluxes and to estimate how much they contribute to ecosystem VOC fluxes. We present here an 8-year data set of forest floor VOC fluxes, measured with three automated chambers connected to the quadrupole proton transfer reaction mass spectrometer (quadrupole PTR-MS). The exceptionally long data set shows that forest floor fluxes were dominated by monoterpenes and methanol, with relatively comparable emission rates between the years. Weekly mean monoterpene fluxes from the forest floor were highest in spring and in autumn (maximum 59 and 86 \u03bcg m-2 h-1, respectively), whereas the oxygenated VOC fluxes such as methanol had highest weekly mean fluxes in spring and summer (maximum 24 and 79 \u03bcg m-2 h-1, respectively). Although the chamber locations differed from each other in emission rates, the inter-annual dynamics were very similar and systematic. Accounting for this chamber location dependent variability, temperature and relative humidity, a mixed effects linear model was able to explain 79-88% of monoterpene, methanol, acetone, and acetaldehyde fluxes from the boreal forest floor. The boreal forest floor was a significant contributor in the forest stand fluxes, but its importance varies between seasons, being most important in autumn. The forest floor emitted 2-93% of monoterpene fluxes in spring and autumn and 1-72% of methanol fluxes in spring and early summer. The forest floor covered only a few percent of the forest stand fluxes in summer.", "keywords": ["VOC EMISSIONS", "Plant Science", "ATMOSPHERIC OH", "01 natural sciences", "forest floor", "SB1-1110", "MONOTERPENE EMISSIONS", "vegetation", "biogenic volatile organic compound", "11. Sustainability", "SCOTS PINE", "EXCHANGE", "0105 earth and related environmental sciences", "decomposition", "CLIMATE-CHANGE", "seasonality", "temperature", "Plant culture", "Forestry", "15. Life on land", "SOIL", "MODEL", "Environmental sciences", "flux", "13. Climate action", "PTR-TOF", "METHANOL"]}, "links": [{"href": "https://doi.org/10.3389/fpls.2019.00191"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fpls.2019.00191", "name": "item", "description": "10.3389/fpls.2019.00191", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fpls.2019.00191"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-02-22T00:00:00Z"}}, {"id": "10.3390/agronomy11040652", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:20:40Z", "type": "Journal Article", "created": "2021-03-29", "title": "Wheat Yield Forecasting for the Tisza River Catchment Using Landsat 8 NDVI and SAVI Time Series and Reported Crop Statistics", "description": "

Due to the increasing global demand of food grain, early and reliable information on crop production is important in decision making in agricultural production. Remote sensing (RS)-based forecast models developed from vegetation indices have the potential to give quantitative and timely information on crops for larger regions or even at farm scale. Different vegetation indices are being used for this purpose, however, their efficiency in estimating crop yield certainly needs to be tested. In this study, wheat yield was derived by linear regressing reported yield values against a time series of six different peak-seasons (2013\u20132018) using the Landsat 8-derived Normalized Difference Vegetation Index (NDVI) and Soil Adjusted Vegetation Index (SAVI). NDVI- and SAVI-based forecasting models were validated based on 2018\u20132019 datasets and compared to evaluate the most appropriate index that performs better in forecasting wheat production in the Tisza river basin. Nash-Sutcliffe efficiency index was positive with E1 = 0.716 for the model from NDVI and for SAVI E1 = 0.909, which means that the forecasting method developed and performed good forecast efficiency. The best time for wheat yield prediction with Landsat 8-SAVI and NDVI was found to be the beginning of full biomass period from the 138th to 167th day of the year (18 May to 16 June; BBCH scale: 41\u201371) with high regression coefficients between the vegetation indices and the wheat yield. The RMSE of the NDVI-based prediction model was 0.357 t/ha (NRMSE: 7.33%). The RMSE of the SAVI-based prediction model was 0.191 t/ha (NRMSE 3.86%). The validation of the results revealed that the SAVI-based model provided more accurate forecasts compared to NDVI. Overall, probable yield amount is possible to predict far before harvest (six weeks earlier) based on Landsat 8 NDVI and SAVI and generating simple thresholds for yield forecasting, and a potential loss of wheat yield can be mapped.

", "keywords": ["Landsat 8", "2. Zero hunger", "SAVI", "NDVI", "S", "13. Climate action", "wheat", "yield forecasting", "Agriculture", "15. Life on land", "6. Clean water"]}, "links": [{"href": "http://www.mdpi.com/2073-4395/11/4/652/pdf"}, {"href": "https://www.mdpi.com/2073-4395/11/4/652/pdf"}, {"href": "https://doi.org/10.3390/agronomy11040652"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/agronomy11040652", "name": "item", "description": "10.3390/agronomy11040652", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/agronomy11040652"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-03-29T00:00:00Z"}}, {"id": "10.3390/proceedings2019030057", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:20:54Z", "type": "Journal Article", "created": "2020-05-20", "title": "Soil Structural Shifts Caused by Land Management Practices", "description": "Long-term agricultural practices have been shown to affect soil hydro-physical properties in multiple ways. They affect the stability and distribution of soil aggregates leading to changes in water retention, bulk density, hydraulic conductivity, and porosity. Aggregate stability is an indicator of the resilience of aggregates to external forces. Unstable aggregates can change rapidly under different land management practices and meteorological conditions. \u039cacro-aggregates (>250 \u03bcm) are formed more rapidly and are often more sensitive to management changes. Here, four different long-term experiments, run by the SoilCare Horizon 2020 Project partners, were sampled and analyzed, in order to evaluate the impact of different agricultural management practices in the water stability of soil aggregates and the fractions distribution. Different experiments selected, include control-conventional treatment and different treatments, which are considered soil improving. The treatments are about soil cultivation (conventional ploughing-control, zero tillage, minimum tillage, strip tillage, shallow tillage) and organic input (mineral fertilization-control, residue incorporation, farmyard manure) and are selected in areas with different climatic and soil conditions. Initial results indicate that treatments with less soil disturbance present more water stable aggregates (WSA) >250 \u03bcm and higher mean weight diameters (MWD), as well as the same trend following the treatments with increased organic input. According to Tukey\u2019s Honest Significance test (p < 0.05), management practices are shown to have a significant impact on the WSA and MWD in most cases, but not all similar treatments in the different areas present the same results. The large macro-aggregates (>2 mm) seem to be greatly sensitive to soil cultivation, whereas the results for the small macro-aggregates (250 \u03bcm\u20132 mm) are controversial among the different tillage experiments. The different organic inputs seems to affect more the small macro-aggregates than the larger. The initial results indicate that the shifts in the soil structure cannot only be justified by the different management practices. The interrelationships and potential links with other soil properties like texture, bulk density, particulate organic matter and climate will be taken into account in further steps in order to understand the mechanisms behind the aggregation shifts.", "keywords": ["long-term experiments", "2. Zero hunger", "13. Climate action", "soil cultivation", "A", "aggregates", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "soil structure", "SoilCare", "General Works", "6. Clean water"], "contacts": [{"organization": "Ioanna Panagea, Jan Diels, Guido Wyseure,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.3390/proceedings2019030057"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/TERRAenVISION%202019", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/proceedings2019030057", "name": "item", "description": "10.3390/proceedings2019030057", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/proceedings2019030057"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-05-19T00:00:00Z"}}, {"id": "10.3390/s21103544", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:20:58Z", "type": "Journal Article", "created": "2021-05-20", "title": "Platinum-Based Interdigitated Micro-Electrode Arrays for Reagent-Free Detection of Copper", "description": "

Water is a precious resource that is under threat from a number of pressures, including, for example, release of toxic compounds, that can have damaging effect on ecology and human health. The current methods of water quality monitoring are based on sample collection and analysis at dedicated laboratories. Recently, electrochemical-based methods have attracted a lot of attention for environmental sensing owing to their versatility, sensitivity and their ease of integration with cost effective, smart and portable readout systems. In the present work, we report on the fabrication and characterization of platinum-based interdigitated microband electrodes arrays, and their application for trace detection of copper. Using square wave voltammetry after acidification with mineral acids, a limit of detection of 0.8 \u03bcg/L was achieved. Copper detection was also undertaken on river water samples and compared with standard analytical techniques. The possibility of controlling the pH at the surface of the sensors\u2014thereby avoiding the necessity to add mineral acids\u2014was investigated. By applying potentials to drive the water splitting reaction at one comb of the sensor\u2019s electrode (the protonator), it was possible to lower the pH in the vicinity of the sensing electrode. Detection of standard copper solutions down to 5 \u03bcg/L (ppb) using this technique is reported. This reagent free method of detection opens the way for autonomous, in situ monitoring of pollutants in water bodies.

", "keywords": ["13. Climate action", "Chemical technology", "electrochemical sensors", "pH control", "TP1-1185", "02 engineering and technology", "heavy metals", "0210 nano-technology", "01 natural sciences", "Article", "6. Clean water", "environmental monitoring", "0104 chemical sciences"]}, "links": [{"href": "http://www.mdpi.com/1424-8220/21/10/3544/pdf"}, {"href": "https://doi.org/10.3390/s21103544"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Sensors", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/s21103544", "name": "item", "description": "10.3390/s21103544", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/s21103544"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-05-19T00:00:00Z"}}, {"id": "10.4081/ija.2012.e26", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:21:11Z", "type": "Journal Article", "created": "2012-05-31", "description": "Interest in biochar (BC) has grown dramatically in recent years, due mainly to the fact that its incorporation into soil reportedly enhances carbon sequestration and fertility. Currently, BC types most under investigation are those obtained from organic matter (OM) of plant origin. As great amounts of manure solids are expected to become available in the near future, thanks to the development of technologies for the separation of the solid fraction of animal effluents, processing of manure solids for BC production seems an interesting possibility for the recycling of OM of high nutrient value. The aim of this study was to investigate carbon (C) sequestration and nutrient dynamics in soil amended with BC from dried swine manure solids. The experiment was carried out in laboratory microcosms on a silty clay soil. The effect on nutrient dynamics of interaction between BC and fresh digestate obtained from a biogas plant was also investigated to test the hypothesis that BC can retain nutrients. A comparison was made of the following treatments: soil amended with swine manure solids (LC), soil amended with charred swine manure solids (LT), soil amended with wood chip (CC), soil amended with charred wood chip (CT), soil with no amendment as control (Cs), each one of them with and without incorporation of digestate (D) for a total of 10 treatments. Biochar was obtained by treating OM (wood chip or swine manure) with moisture content of less than 10% at 420\u00b0C in anoxic conditions. The CO2-C release and organic C, available phosphorus (P) (Olsen P, POls) and inorganic (ammonium+nitrate) nitrogen (N) (Nmin) contents at the start and three months after the start of the experiment were measured in the amended and control soils. After three months of incubation at 30\u00b0C, the CO2-C emissions from soil with BC (CT and LT, \u00b1D) were the same as those in the control soil (Cs) and were lower than those in the soils with untreated amendments (CC and LC, \u00b1D). The organic C content decreased in CT and LT to a lesser extent than in CC and LC. In soils with D (+D), the CO2-C emissions were equal to or higher than those in soils without (-D). The Nmin content increased in all treatments; the POls content decreased in the +D treatments. The incorporation of BC into soil, by reducing CO2 emissions, actually contributes to C sequestration without modifying N availability for crops. For a given N content, the BC from swine manure solids supplies much more P than the non-treated OM and, therefore, represents an interesting source of P for crops.", "keywords": ["2. Zero hunger", "S", "emissions", "Plant culture", "Agriculture", "04 agricultural and veterinary sciences", "nitrogen", "6. Clean water", "SB1-1110", "13. Climate action", "manure", "0401 agriculture", " forestry", " and fisheries", "biochar", "phosphorus"]}, "links": [{"href": "https://doi.org/10.4081/ija.2012.e26"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Italian%20Journal%20of%20Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.4081/ija.2012.e26", "name": "item", "description": "10.4081/ija.2012.e26", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.4081/ija.2012.e26"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-01-01T00:00:00Z"}}, {"id": "10.5061/dryad.1v87f", "type": "Feature", "geometry": null, "properties": {"license": "unspecified", "updated": "2026-07-26T16:21:19Z", "type": "Dataset", "title": "Data from: Post-fire changes in forest carbon storage over a 300-year chronosequence of Pinus contorta-dominated forests", "description": "unspecifiedA warming climate may increase the frequency and severity of stand-replacing wildfires, reducing carbon (C) storage in forest ecosystems. Understanding the variability of post-fire C cycling on heterogeneous landscapes is critical for predicting changes in C storage with more frequent disturbance. We measured C pools and fluxes for 77 lodgepole pine (Pinus contorta Dougl. ex Loud var. latifolia Engelm.) stands in and around Yellowstone National Park (YNP) along a 300-year chronosequence to examine how quickly forest C pools recover after a stand-replacing fire, their variability through time across a complex landscape, and the role of stand structure in this variability. Carbon accumulation after fire was rapid relative to the historical mean fire interval of 150-300 years, recovering nearly 80% of pre-fire C in 50 years and 90% within 100 years. Net ecosystem carbon balance (NECB) declined monotonically from 160 g C m-2 yr-1 at age 12 to 5 g C m 2 yr-1 at age 250, but was never negative after disturbance. Decomposition and accumulation of dead wood contributed little to NECB relative to live biomass in this system. Aboveground net primary productivity was correlated with leaf area for all stands, and the decline in aboveground net primary productivity with forest age was related to a decline in both leaf area and growth efficiency. Forest structure was an important driver of ecosystem C, with ecosystem C, live biomass C, and organic soil C varying with basal area or tree density in addition to forest age. Rather than identifying a single chronosequence, we found high variability in many components of ecosystem C stocks through time; a > 50% random subsample of the sampled stands was necessary to reliably estimate the non-linear equation coefficients for ecosystem C. At the spatial scale of YNP, this variability suggests that landscape C develops via many pathways over decades and centuries, with prior stand structure, regeneration, and within-stand disturbance all important. With fire rotation projected to be < 30 years by mid century in response to a changing climate, forests in YNP will store substantially less C (at least 4.8 kg C/m2 or 30% less).", "keywords": ["Pinus contorta var. latifolia", "13. Climate action", "Yellowstone", "lodgepole pine", "net ecosystem carbon balance", "15. Life on land", "Carbon"]}, "links": [{"href": "https://doi.org/10.5061/dryad.1v87f"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.1v87f", "name": "item", "description": "10.5061/dryad.1v87f", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.1v87f"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-12-03T00:00:00Z"}}, {"id": "10.5061/dryad.3sm0340", "type": "Feature", "geometry": null, "properties": {"license": "unspecified", "updated": "2026-07-26T16:21:20Z", "type": "Dataset", "title": "Data from: Vegetation type controls root turnover in global grasslands", "description": "unspecifiedRoot turnover in grasslands", "keywords": ["2. Zero hunger", "13. Climate action", "15. Life on land"], "contacts": [{"organization": "Wang, Jinsong, Sun, Jian, Yu, Zhen, Li, Yong, Tian, Dashuan, Wang, Bingxue, Li, Zhaolei, Niu, Shuli,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.3sm0340"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.3sm0340", "name": "item", "description": "10.5061/dryad.3sm0340", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.3sm0340"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-08-15T00:00:00Z"}}, {"id": "10.5061/dryad.cz8w9gj78", "type": "Feature", "geometry": null, "properties": {"license": "unspecified", "updated": "2026-07-26T16:21:26Z", "type": "Dataset", "title": "Soil microbial relative resource limitation exhibited contrasting seasonal patterns along an elevational gradient in Yulong snow mountain", "description": "unspecified", "keywords": ["2. Zero hunger", "mountain ecosystems", "13. Climate action", "microbial metabolic mechanisms", "microbial relative C limitation", "microbial relative P limitation", "C use efficiency", "FOS: Earth and related environmental sciences", "15. Life on land", "elevations"], "contacts": [{"organization": "Zhang, Dandan, Wu, Baoyun, Li, Jinsheng, Cheng, Xiaoli,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.cz8w9gj78"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.cz8w9gj78", "name": "item", "description": "10.5061/dryad.cz8w9gj78", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.cz8w9gj78"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-02-02T00:00:00Z"}}, {"id": "10.5061/dryad.pb271", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:21:29Z", "type": "Dataset", "title": "Data from: Interactions among roots, mycorrhizae and free-living microbial communities differentially impact soil carbon processes", "description": "unspecifiedPlant roots, their associated microbial community and free-living soil microbes interact to regulate the movement of carbon from the soil to the atmosphere, one of the most important and least understood fluxes of terrestrial carbon. Our inadequate understanding of how plant\u2013microbial interactions alter soil carbon decomposition may lead to poor model predictions of terrestrial carbon feedbacks to the atmosphere. Roots, mycorrhizal fungi and free-living soil microbes can alter soil carbon decomposition through exudation of carbon into soil. Exudates of simple carbon compounds can increase microbial activity because microbes are typically carbon limited. When both roots and mycorrhizal fungi are present in the soil, they may additively increase carbon decomposition. However, when mycorrhizas are isolated from roots, they may limit soil carbon decomposition by competing with free-living decomposers for resources. We manipulated the access of roots and mycorrhizal fungi to soil in situ in a temperate mixed deciduous forest. We added 13C-labelled substrate to trace metabolized carbon in respiration and measured carbon-degrading microbial extracellular enzyme activity and soil carbon pools. We used our data in a mechanistic soil carbon decomposition model to simulate and compare the effects of root and mycorrhizal fungal presence on soil carbon dynamics over longer time periods. Contrary to what we predicted, root and mycorrhizal biomass did not interact to additively increase microbial activity and soil carbon degradation. The metabolism of 13C-labelled starch was highest when root biomass was high and mycorrhizal biomass was low. These results suggest that mycorrhizas may negatively interact with the free-living microbial community to influence soil carbon dynamics, a hypothesis supported by our enzyme results. Our steady-state model simulations suggested that root presence increased mineral-associated and particulate organic carbon pools, while mycorrhizal fungal presence had a greater influence on particulate than mineral-associated organic carbon pools. Synthesis. Our results suggest that the activity of enzymes involved in organic matter decomposition was contingent upon root\u2013mycorrhizal\u2013microbial interactions. Using our experimental data in a decomposition simulation model, we show that root\u2013mycorrhizal\u2013microbial interactions may have longer-term legacy effects on soil carbon sequestration. Overall, our study suggests that roots stimulate microbial activity in the short term, but contribute to soil carbon storage over longer periods of time.", "keywords": ["2. Zero hunger", "roots", "13. Climate action", "simulation model", "carbon dynamics", "Rhizosphere", "stable isotope", "plant-soil (belowground) interactions", "15. Life on land", "extra-cellular enzyme activity", "mycorrhizae"], "contacts": [{"organization": "Moore, Jessica A. M., Jiang, Jiang, Patterson, Courtney M., Wang, Gangsheng, Mayes, Melanie A., Classen, Aim\u00e9e T.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.pb271"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.pb271", "name": "item", "description": "10.5061/dryad.pb271", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.pb271"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-14T00:00:00Z"}}, {"id": "10.5194/acp-10-7017-2010", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-26T16:21:34Z", "type": "Journal Article", "created": "2010-04-29", "description": "

Abstract. We present and discuss a new dataset of gridded emissions covering the historical period (1850\uffe2\uff80\uff932000) in decadal increments at a horizontal resolution of 0.5\uffc2\uffb0 in latitude and longitude. The primary purpose of this inventory is to provide consistent gridded emissions of reactive gases and aerosols for use in chemistry model simulations needed by climate models for the Climate Model Intercomparison Program #5 (CMIP5) in support of the Intergovernmental Panel on Climate Change (IPCC) Fifth Assessment Report (AR5). Our best estimate for the year 2000 inventory represents a combination of existing regional and global inventories to capture the best information available at this point; 40 regions and 12 sectors are used to combine the various sources. The historical reconstruction of each emitted compound, for each region and sector, is then forced to agree with our 2000 estimate, ensuring continuity between past and 2000 emissions. Simulations from two chemistry-climate models is used to test the ability of the emission dataset described here to capture long-term changes in atmospheric ozone, carbon monoxide and aerosol distributions. The simulated long-term change in the Northern mid-latitudes surface and mid-troposphere ozone is not quite as rapid as observed. However, stations outside this latitude band show much better agreement in both present-day and long-term trend. The model simulations indicate that the concentration of carbon monoxide is underestimated at the Mace Head station; however, the long-term trend over the limited observational period seems to be reasonably well captured. The simulated sulfate and black carbon deposition over Greenland is in very good agreement with the ice-core observations spanning the simulation period. Finally, aerosol optical depth and additional aerosol diagnostics are shown to be in good agreement with previously published estimates and observations.

", "keywords": ["info:eu-repo/classification/ddc/550", "550", "IPCC", "[SDE.MCG]Environmental Sciences/Global Changes", "Physics", "QC1-999", "emissions", "551", "01 natural sciences", "7. Clean energy", "J", "[SDE.MCG] Environmental Sciences/Global Changes", "Chemistry", "13. Climate action", "[SDE.ES] Environmental Sciences/Environment and Society", "CMIP5", "[SDE.ES]Environmental Sciences/Environment and Society", "QD1-999", "AR5", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://pure.iiasa.ac.at/id/eprint/9279/1/acp-10-7017-2010.pdf"}, {"href": "http://pure.iiasa.ac.at/id/eprint/9279/1/acp-10-7017-2010.pdf"}, {"href": "https://doi.org/10.5194/acp-10-7017-2010"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Atmospheric%20Chemistry%20and%20Physics", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5194/acp-10-7017-2010", "name": "item", "description": "10.5194/acp-10-7017-2010", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5194/acp-10-7017-2010"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-02-19T00:00:00Z"}}, {"id": "10.5194/bg-15-1933-2018", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:21:37Z", "type": "Journal Article", "created": "2017-11-21", "title": "Straw incorporation increases crop yield and soil organic carbon sequestration but varies under different natural conditions and farming practices in China: a system analysis", "description": "

Abstract. Loss of soil organic carbon (SOC) from agricultural soils is a key indicator of soil degradation associated with reductions in net primary productivity in crop production systems worldwide. Simple technical and locally appropriate solutions are required for farmers to increase SOC and to improve cropland management. In the last 30 years, straw incorporation has gradually been implemented across China in the context of agricultural intensification and rural livelihood improvement. A meta-analysis of data published before the end of 2016 was undertaken to investigate the effects of straw incorporation on crop production and SOC sequestration. The results of 68 experimental studies throughout China in different edaphic, climate regions and under different farming regimes were analyzed. Compared with straw removal, straw incorporation significantly sequestered SOC (0\uffe2\uff80\uff9320\uffe2\uff80\uff89cm depth) at the rate of 0.35 (range 0.31\uffe2\uff80\uff930.40)\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921, increased crop grain yield by 13.4\uffe2\uff80\uff89% (range 9.3\uffe2\uff80\uff89%\uffe2\uff80\uff9318.4\uffe2\uff80\uff89%) and had a conversion efficiency of the applied straw-C as 16\uffe2\uff80\uff89%\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff892\uffe2\uff80\uff89% across the whole of China. The combined straw incorporation at the rate of 3\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921 with mineral fertilizer of 200\uffe2\uff80\uff93400\uffe2\uff80\uff89kg N\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921 was demonstrated to be the best combination for farmers to use with crop yield increased by 32.7\uffe2\uff80\uff89% (range 17.9\uffe2\uff80\uff89%\uffe2\uff80\uff9356.4\uffe2\uff80\uff89%) and SOC sequestrated by the rate of 0.85 (range 0.54\uffe2\uff80\uff931.15)\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921. Straw incorporation achieved higher SOC sequestration rate and crop yield increment when applied to clay soils, under high cropping intensities, and in areas like Northeast China where the soil is being degraded. SOC responses were the greatest in the initial starting phase of straw incorporation and then declined and finally were negligible after 28\uffe2\uff80\uff9362 years, however, crop yield responses were initially low and then increased reaching their highest level at 11\uffe2\uff80\uff9315 years after straw incorporation. Overall, our study confirmed that straw incorporation did create a positive feedback loop of SOC enhancement together with increased crop production, and this is of great practical significance to straw management as agricultural intensifies in China and other regions in the world with different climate conditions.

", "keywords": ["2. Zero hunger", "QE1-996.5", "info:eu-repo/classification/ddc/550", "Ecology", "Life", "QH501-531", "0401 agriculture", " forestry", " and fisheries", "Geology", "04 agricultural and veterinary sciences", "15. Life on land", "QH540-549.5"]}, "links": [{"href": "https://doi.org/10.5194/bg-15-1933-2018"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biogeosciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5194/bg-15-1933-2018", "name": "item", "description": "10.5194/bg-15-1933-2018", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5194/bg-15-1933-2018"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-11-21T00:00:00Z"}}, {"id": "10.5194/bg-2017-527", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-26T16:21:39Z", "type": "Report", "created": "2018-01-23", "title": "Global soil organic carbon removal by water erosion under climate change and land use change during 1850\u20132005 AD", "description": "

Abstract. The onset and expansion of agriculture has accelerated soil erosion by rainfall and runoff substantially, mobilizing vast quantities of soil organic carbon (SOC) globally. Studies show that at timescales of decennia to millennia this mobilized SOC can significantly alter previously estimated carbon emissions from land use change (LUC). However, a full understanding of the impact of erosion on land-atmosphere carbon exchange is still missing. The aim of our study is to better constrain the terrestrial carbon fluxes by developing methods compatible with Earth System Models (ESMs) in order to explicitly represent the links between soil erosion by rainfall and runoff and carbon dynamics. For this we use an emulator that represents the carbon cycle of a land surface model, in combination with the Revised Universal Soil Loss Equation model. We applied this modeling framework at the global scale to evaluate the effects of potential soil erosion (soil removal only) in the presence of other perturbations of the carbon cycle: elevated atmospheric CO2, climate variability, and LUC. We found that over the period 1850\u20132005 AD acceleration of soil erosion leads to a total potential SOC removal flux of 100\u2009Pg C of which 80\u2009% occurs on agricultural, pasture and natural grass lands. Including soil erosion in the SOC-dynamics scheme results in a doubling of the cumulative loss of SOC over 1850\u20132005 due to the combined effects of climate variability, increasing atmospheric CO2 and LUC. This additional erosional loss decreases the cumulative global carbon sink on land by 5\u2009Pg for this specific period, with the largest effects found for the tropics, where deforestation and agricultural expansion increased soil erosion rates significantly. We also show that the potential effects of soil erosion on the global SOC stocks cannot be ignored when compared to the effects of climate change or land use change on the carbon cycle. We conclude that it is necessary to include soil erosion in assessments of LUC and evaluations of the terrestrial carbon cycle.

", "keywords": ["2. Zero hunger", "13. Climate action", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://www.biogeosciences-discuss.net/bg-2017-527/bg-2017-527.pdf"}, {"href": "https://doi.org/10.5194/bg-2017-527"}, {"rel": "self", "type": "application/geo+json", "title": "10.5194/bg-2017-527", "name": "item", "description": "10.5194/bg-2017-527", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5194/bg-2017-527"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-01-23T00:00:00Z"}}, {"id": "10.5194/egusphere-2023-3104", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:21:42Z", "type": "Journal Article", "created": "2024-09-09", "title": "Addressing soil data needs and data gaps in catchment-scale environmental modelling: the European perspective", "description": "

Abstract. To effectively guide agricultural management planning strategies and policy, it is important to simulate water quantity and quality patterns and to quantify the impact of land use and climate change on soil functions, soil health, and hydrological and other underlying processes. Environmental models that depict alterations in surface and groundwater quality and quantity at the catchment scale require substantial input, particularly concerning movement and retention in the unsaturated zone. Over the past few decades, numerous soil information sources, containing structured data on diverse basic and advanced soil parameters, alongside innovative solutions to estimate missing soil data, have become increasingly available. This study aims to (i)\u00a0catalogue open-source soil datasets and pedotransfer functions (PTFs) applicable in simulation studies across European catchments; (ii)\u00a0evaluate the performance of selected PTFs; and (iii)\u00a0present compiled R scripts proposing estimation solutions to address soil physical, hydraulic, and chemical data needs and gaps in catchment-scale environmental modelling in Europe. Our focus encompassed basic soil properties, bulk density, porosity, albedo, soil erodibility factor, field capacity, wilting point, available water capacity, saturated hydraulic conductivity, and phosphorus content. We aim to recommend widely supported data sources and pioneering prediction methods that maintain physical consistency and present them through streamlined workflows.

", "keywords": ["Environmental sciences", "2. Zero hunger", "QE1-996.5", "13. Climate action", "11. Sustainability", "GE1-350", "Geology", "15. Life on land", "6. Clean water"]}, "links": [{"href": "https://soil.copernicus.org/articles/10/587/2024/soil-10-587-2024.pdf"}, {"href": "https://doi.org/10.5194/egusphere-2023-3104"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/SOIL", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5194/egusphere-2023-3104", "name": "item", "description": "10.5194/egusphere-2023-3104", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5194/egusphere-2023-3104"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-12T00:00:00Z"}}, {"id": "10.5194/tc-2018-229", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-26T16:21:53Z", "type": "Report", "created": "2018-11-16", "title": "Organic matter across subsea permafrost thaw horizons on the East Siberian Arctic Shelf", "description": "

Abstract. Thaw of subsea permafrost across the Arctic Ocean shelves might promote the degradation of organic matter to CO2 and CH4, but also create conduits for transfer of deeper CH4 pools to the atmosphere and thereby amplify global warming. In this study, we describe sedimentary characteristics of three subsea permafrost cores of 21\u201356\u2009m length drilled near the current delta of the Lena River in the Buor\u2013Khaya Bay on the East Siberian Arctic Shelf, including content, origin and degradation state of organic matter around the current thaw front. Grain size distribution and optically stimulated luminescence dating suggest the alternating deposition of aeolian silt and fluvial sand over the past 160\u2009000 years. Organic matter in 3\u2009m sections across the current permafrost table was characterized by low organic carbon contents (average 0.7\u2009\u00b1\u20090.2\u2009%) as well as enriched \u03b413C values and low concentrations of the terrestrial plant biomarker lignin compared to other recent and Pleistocene deposits in the study region. The lignin phenol composition further suggests contribution of both tundra and boreal forest vegetation, at least the latter likely deposited by rivers. Our findings indicate high variability in organic matter composition of subsea permafrost even within a small study area, reflecting its development in a heterogeneous and dynamic landscape. Even with this relatively low organic carbon content, the high rates of observed subsea permafrost thaw in this area yield a thaw-out of 1.6\u2009kg\u2009OC\u2009m\u22122\u2009year\u22121, emphasizing the need to constrain the fate of the poorly described and thawing subsea permafrost organic carbon pool.

", "keywords": ["13. Climate action", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.5194/tc-2018-229"}, {"rel": "self", "type": "application/geo+json", "title": "10.5194/tc-2018-229", "name": "item", "description": "10.5194/tc-2018-229", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5194/tc-2018-229"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-11-16T00:00:00Z"}}, {"id": "10.5281/zenodo.10065971", "type": "Feature", "geometry": null, "properties": {"license": "unspecified", "updated": "2026-07-26T16:21:54Z", "type": "Dataset", "title": "Database of topsoil chemical and physical properties in Croatia", "description": "Sources Data for database is collected from four main sources:\u00a0 Data published in book 'Martinovi\u0107, J. and Vrankovi\u0107, A. (Editors), 1997. Baza podataka o hrvatskim tlima, I. Dr\u017eavna uprava za za\u0161titu prirode i okoli\u0161a, Zagreb' labeled as 'martinovic_1997' in the database. This source consists of 2199 pedological profiles sampled from 1963 to 1996, most of which include depth to bedrock information. Data from project: 'Spatial variability of trace and toxic metals in agricultural soils of Croatia', Ministry of Science and Education and Croatian Waters. Project leader: prof.dr.sc. Marija Romi\u0107 from Faculty of Agriculture, Zagreb, labeled as 'agricultural_2013'. Data are sampled from 'database of properties and quality of agricultural soils of Croatia' on 8x8 km grid and consists only from top soil samples (0-30 cm). There are 811 samples in this database. Data from the the project: 'Change in soil carbon stocks and calculation of trends in total nitrogen and organic carbon in soil and C: N ratio', from Ministry of Environmental Protection and Energy, carried on by Croatian Geological Institute (HGI), the Croatian Forestry Institute (H\u0160I) and the Agricultural Land Agency (APZ). This dataset consists of two subsets: 'azo_2013' - 2519 samples of topsoil (0-25 cm), from 1994 to 2004 for making of Geochemistry Atlas of Croatia 'azo_2016' - 742 locations were revisited during 2015-2016 and new samples are taken and analyzed in horizons 0-10 cm, 10-20 cm, 20-30 cm. Network of piezometers Description of sources\u00a0 Martinovi\u0107, J. and Vrankovi\u0107, A. (Editors), 1997. Baza podataka o hrvatskim tlima (Database of Croatian Soils)\u00a0 The database contains data on soil profiles and covers the total area of the Republic of Croatia. Only data accepted by external control are entered in the Database, as well as those profiles for which there is a minimum data. External control of data reliability was performed by comparing the genetical-morphological characteristics of the soil determined by field research and the data of laboratory soil analyses. The profiles for which the field and laboratory analyses are found to differ are rejected. In addition to data on soil properties, basic data on pedogenetic factors are given. The soil profiles surveyed in the period 1963-1996 are entered in the database. The majority of data come from the Basic Pedological Map of Croatia (Osnovna pedolo\u0161ka karta Hrvatske - OPKH) project. The following are entered in the Database: 1347 profiles in volume I and 851 profiles in volume II, a total of 2198 pedological profiles Spatial variability of trace and toxic metals in agricultural soils of Croatia, Project Leader: Marija Romi\u0107\u00a0 The problem of exposure of agricultural soils to different anthropogenic inputs of toxic metals, but also of other potentially toxic substances, has acquired global dimensions in the last decades. Besides atmospheric deposition, environmental dispersion of chemicals used in agriculture is an important factor directly affecting the natural soil functions, or indirectly endangering the biosphere by bioaccumulation and inclusion into the food chain. Metal concentrations in soil can be generally predicted starting with the element abundance in the parent material. The extent to which pedogenesis affects heavy metals distribution varies according to the prevailing factors affecting soil processes. Because of the toxicity to plants and animals, it is important to determine their content, forms and distribution. Such hypotheses may be tested by total metal content determination, as well as other elements relevant for geochemical valorization of the agricultural soils of Croatia. Thus, the spatial variability and baseline of elements in soils will be determined by means of relevant statistical and geostatistical methods. The maps of toxic metal distribution will be produced and the suitability of soils for agriculture will be assessed. GIS is increasingly used in environmental assessment studies because of its ability to superimpose different spatial information and to combine them with the results of statistical analysis, enabling thus the detection of complex spatial relationships among different parameters. Geostatistics and multivariate statistics has been widely used in geochemical studies to identify pollution sources and to apportion natural vs. anthropogenic contribution, establishing a geochemical background as well. The main objectives of the investigation are: (i) to provide a geochemical database relevant to the agricultural soils in Croatia; (ii) to provide a detailed information about the natural variability of the geochemical background which is pertinent to administrative and legal issues as well as to safety food production and environmental protection; (iii) presenting the influence of human and other environmental activities on the soil quality mainly regarding the toxic and trace metal contents, and (iv) we are going to observe the influence of natural conditions on regional differences which have been widely neglected so far, and have not been taken into account while national regulations and guidelines on soil toxic metal contents have been established. Change in soil carbon stocks and calculation of trends in total nitrogen and organic carbon in soil and C: N ratio\u00a0 The project is funded by the Fund for Environmental Protection and Energy Efficiency within the Program 'Upgrading and Development of the Environmental Information System and Improving the Monitoring and Reporting System on the State of the Environment in the Republic of Croatia', Component 2: Improving the Monitoring and Reporting System on the State of the Environment Croatia; improving the system of data collection and exchange and developing methodologies for their processing in accordance with the guidelines of the UNFCCC and the Kyoto Protocol defined by the IPCC (Intergovernmental Panel on Climate Change).\u00a0 The project holder is the Ministry of Environmental Protection and Energy, and the executors are the Croatian Geological Institute, the Croatian Forestry Institute and the Agricultural Land Agency. In the period 2014-2017, field and laboratory research of soil conditions was conducted at 725 representative locations. General data on the location of sampling were collected, which contain administrative, locational, geographical and other data (relief, climatic and meteorological data, detailed data on land use and vegetation cover, description of surface soil properties). Field soil sampling for each LULUCF land use category was performed according to a modified methodology described in the EU DG JRC (Joint Research Center) 'Protocol for soil sampling to confirm changes in organic carbon stocks in the EU' by Stolbovoy et al. 2007 (Soil sampling protocol to certify the changes of organic carbon stock in mineral soil of the European Union - EU JRC). The protocol modifications aimed to ensure reporting under the UNFCCC and Kyoto protocols, i.e., to ensure compliance with the IPCC methodology. Soil sampling on forest land (FL) according to the JRC protocol is planned at two depths of 0-10 cm and 10 - 20 cm and an organic layer (list), but due to reporting requirements under the UNFCCC and Kyoto protocol, sampling was carried out at a depth of 20 - 30 cm. Land under crops (CL) was sampled at two depths (0-20 cm and 20-30 cm) and grasslands (GL), wetlands (WL), settlements (SL) and other land (OL) were sampled at three depths 0- 10, 10-20 and 20-30 cm. Geochemical analyzes were performed at depths of 0\u201310 and 20\u201330 cm for forest soils (FL) and for meadows and pastures (GL) while for soils under crops (CL) composite samples of 0\u201330 cm and 0\u201320 cm were analyzed. Network of piezometers To get a more accurate depth to bedrock parameter, positions of 812 piezometers are considered as they have at least 4 meters of depth to bedrock. Description of database Column names and descriptions: Metadata columns: site_key - unique identifier that identifies sample in source database\u00a0source_db - label of source database\u00a0source_sampled - label of organization/team who sampled and analyzed data\u00a0site_obsdate - year of taking sample\u00a0longitude_decimal_degrees - longitude in degrees in WGS84 geographical projection\u00a0latitude_decimal_degrees - latitude in degrees in WGS84 geographical projection\u00a0pedon_completeness_index - quality factor (0-100)\u00a0taxgrtgroup - classification of sample according to WBR 2014/2016 classification\u00a0 Soil properties columns: column name - property - measurement units - descriptionoc - Carbon, Organic - % wt - CMS analyte. Organic carbon is a measure of all organic forms of carbon in the soil, including organic carbon within minerals.\u00a0n_tot_ncs - Nitrogen, Total NCS - % wt - Total nitrogen is a measure of all organic and inorganic nitrogen, including that found in nitrogen minerals.ca_mehlich3 - Calcium, Mehlich3 Extractable \u00a0- mg/kg - The calcium extracted by the Mehlich III solution.\u00a0k_mehlich3 - Potassium, Mehlich3 Extractable - mg/kg - The potassium extracted by the Mehlich III solution.\u00a0mg_mehlich3 - Magnesium, Mehlich3 Extractable - mg/kg - The magnesium extracted by the Mehlich III solution.\u00a0p_mehlich3 - Phosphorus, Mehlich3 Extractable - mg/kg - The phosphorus extracted by the Mehlich III solution.\u00a0cec_sum - Cation Exchange Capacity, Summary \u00a0 cmol(+)/kg - The effective cation exchange capacity is calculated by BASE_SUM+AL_KCL. It is not calculated if soluble salts are present. It is reported as meq per 100 grams on a <2 mm base. CMS derived value default\u00a0ec_satp - Electrical Conductivity , Saturation Extract - dS/m - The electrical conductivity of the saturation extract is used to estimate the concentration of salts in a sample, and provides inferences on cation concentration in solution and osmotic pressure. It is reported as mmhos per centimeter.\u00a0caco3 - Carbonates - % wt - Carbonate in the < 2mm fraction is measured by CO2 evolution after acid treatment. It is reported as gravimetric percent CaCO3 on a <2 mm base, even though carbonates of Mg, Na, K, and Fe may be present and react with the acidph_h2o - pH, 1:1 Soil-Water Suspension - (NA) - The pH, 1:1 soil-water suspension is the pH of a sample measured in distilled water at a 1:1 soil:solution ratio. If wider ratios increase the pH, salts are indicated.\u00a0ph_kcl - The pH, 1:1 soil-KCl suspension - (NA) - The pH, 1:1 soil-KCl suspension is the pH of a sample measured in 1.0N KCl at a 1:1 soil:solution ratio. If the pH in KCl < pH in water, Al+++ is indicated.\u00a0total_clay - Clay, Total - % wt - Total clay is the soil separate with <0.002 mm particle diameter. Clay size carbonate is included. Total clay is reported as a weight percent of the <2 mm fraction.\u00a0total_silt - Silt, Total - % wt - Total silt is the soil separate with 0.002 to 0.05 mm particle size. It is reported as a gravimetric percent on a <2 mm base.\u00a0total_sand - Sand, Total - % wt - Total sand is the soil separate with 0.05 to 2.0 mm particle diameter. It is reported as a gravimetric percent on a <2 mm base.\u00a0wpg2 - Coarse fragments - % wt - The weight fraction of particles with >2 mm diameter is reported as a gravimetric percent on a whole soil base.\u00a0db_od Bulk Density, <2mm Fraction, Ovendry - g/cc - Bulk density, oven dry (105 C) is the weight per unit volume of the <2 mm fraction, with volume measured on oven dry (105 C) natural fabric (clods). It is reported as grams per cubic centimeter on a <2 mm base.\u00a0dbr - Depth to bedrock - cm - Depth to the R horizon or similar", "keywords": ["2. Zero hunger", "13. Climate action", "15. Life on land", "16. Peace & justice", "3. Good health"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.10065971"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.10065971", "name": "item", "description": "10.5281/zenodo.10065971", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.10065971"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-11-02T00:00:00Z"}}, {"id": "10.5281/zenodo.1423484", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-26T16:22:37Z", "type": "Dataset", "title": "GPP: Site-scale and global model outputs from P-model used for Stocker et al. (2019) Nature Geosci.", "description": "Data from article Stocker et al. (in review) *Nature Geosci.* The datasets provided here include: Site-level GPP model results from the P-model (Wang et al., 2017) Model outputs from global simulations with the P-model (Wang et al., 2017) as implemented for the study by Stocker et al. (2019) This data may be used to partly reproduce results presented in Stocker et al. (2019) Nature Geosci. 'Partly' because we used data for our analysis that was not open access but was confidentially shared with us. This includes remote sensing-based GPP estimates from the BESS and VPM models. Other open access data that was used for the analysis may not be distributed under this DOI. This includes FLUXNET 2015 data and MODIS data. For reproducing results of Stocker et al. (2019) regarding site-scale evaluations, run for example the scripts `plot_bias_all.R` and `plot_bias_problem.R`, available from Github or Zenodo, using CSV files provided here (see comments in scripts). For more insight, including analysis of global simulation outputs, see RMarkdown file `si_soilm_global.Rmd`. This renders the supplementary information PDF document provided along with Stocker et al. (2019), which is available also on RPubs. The present datasets are prepared by script `prepare_data_openaccess.R ` on Github or Zenodo. Data description Site-level data Data is provided as CSV files: `gpp_daily_fluxnet_stocker18natgeo.csv`: Daily data for full time series (not including MODIS GPP) `gpp_8daily_fluxnet_stocker18natgeo.csv`: Data aggregated to 8-day periods corresponding to MODIS dates (including MODIS GPP) `gpp_alg_daily_fluxnet_stocker18natgeo.csv`: Data filtered to periods with substantial soil moisture effects ('fLUE droughts' following Stocker et al. (2018a)) `gpp_alg_8daily_fluxnet_stocker18natgeo.csv`: Data aggregated to 8-day periods and filtered to periods with substantial soil moisture effects. Each column is a variable with the following name and units (not all variables are available in all files): `site_id`: FLUXNET site ID `date`: Date of measurement, units: YYYY-MM-DD `gpp_pmodel` and `gpp_modis`: Simulated GPP from the P-model and MODIS (see Stocker et al. (2018b), Methods, RS models), units: g C m-2 d-1 (mean across 8 day periods in respective files) `aet_splash`: Simulated actual evapotranspiration from the SPLASH model (Davis et al., 2017), units: mm d-1 `pet_splash`: Simulated potential evapotranspiration from the SPLASH model (Davis et al., 2017), units: mm d-1 `soilm_splash`: Soil moisture simulated by the SPLASH model (Davis et al., 2017), normalised to vary between zero and one at the maximum water holding capacity, unitless. `flue`: fLUE estimate from Stocker et al. (2018). Estimates soil moisture stress on light use efficiency from flux data, unitless. `beta_a`, `beta_b`, and `beta_c`: Empirical soil moisture stress, used as multiplier to simulated GPP as described in Stocker et al. (2018b), unitless. Global P-model simulation outputs GPP and soil moisture output is provided as NetCDF files for simulations s0, and s1b (see Stocker et al. (2018b)). All meta information is provided therein. Files for simulation s1b are names as follows (for outputs from other simulations replace s1b with other simulation name). The fraction of each gridcell covered by land (not open water or ice) is given by separate file `s1b_fapar3g_v2_global.fland.nc`. `s1b_fapar3g_v2_global.d.gpp.nc`: Daily GPP from simulation s1b. `s1b_fapar3g_v2_global.d.wcont.nc`: Daily soil moisture from simulation s1b (is identical in other simulations, therefore not provided.) Due to limited total file size allowed for uploads to Zenodo, only outputs from s1b are provided here. Other outputs may be obtained upon request addressed to benjamin.stocker@gmail.com. References Davis, T. W. et al. Simple process-led algorithms for simulating habitats (SPLASH v.1.0): robust indices of radiation, evapotranspiration and plant-available moisture. Geoscientific Model Development 10, 689\u2013708 (2017).
Hufkens, K. khufkens/gee_subset: Google Earth Engine subset script & library. (2017). doi:10.5281/zenodo.833789Running, S. W. et al. A Continuous Satellite-Derived Measure of Global Terrestrial Primary Production. Bioscience 54, 547\u2013560 (2004).
Stocker, B. et al., Quantifying soil moisture impacts on light use efficiency across biomes, New Phytologist, doi: 10.1111/nph.15123 (2018a).
Stocker, B. et al., Satellite monitoring underestimates the impact of drought on terrestrial primary productivity, Nature Geoscience (2019).
Wang, H. et al. Towards a universal model for carbon dioxide uptake by plants. Nat Plants 3, 734\u2013741 (2017).
", "keywords": ["13. Climate action"], "contacts": [{"organization": "Stocker, Benjamin", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.1423484"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.1423484", "name": "item", "description": "10.5281/zenodo.1423484", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.1423484"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-09-21T00:00:00Z"}}, {"id": "10.5281/zenodo.15680931", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:23:05Z", "type": "Journal Article", "created": "2025-06-15", "title": "Investigating the extent of PFAS contamination in the Upper Danube Basin across environmental compartments", "description": "Abstract Background

Per- and polyfluoroalkyl substances (PFAS) are emerging organic pollutants widely detected in environmental systems, posing risks to human health and the ecosystem. Despite increasing efforts to monitor PFAS in river systems, knowledge gaps remain regarding sources and emissions via different pathways. This study investigates PFAS contamination across multiple environmental compartments in the Upper Danube Basin, including surface water, groundwater, wastewater, landfill leachate, surface runoff, and atmospheric deposition. The primary objectives are to assess the extent of PFAS contamination, identify key emission sources and transport pathways, and evaluate associated risks in terms of the potential exceedance of current and proposed environmental regulatory thresholds in the European Union.

Results

The findings reveal a widespread presence of PFAS, with PFOA, PFOS and short-chain compounds being predominant. The Alz River and Gendorf chemical park emerge as hotspots with far-reaching effects downstream, contributing significantly to diffuse legacy contamination of PFOA and being a significant source of two industrial PFOA substitutes, ADONA and GenX. Wastewater treatment plants, old municipal landfills, and sites with a history of fire-fighting foam application are identified as key pathways or sources of legacy pollution, exhibiting higher concentrations compared to the other matrices. Notably, no significant removal is observed when comparing influent and effluent samples from conventional WWTPs. The study further demonstrates that groundwater is vulnerable to contamination from point sources and to infiltration from rivers, with bank filtration proving largely ineffective in preventing PFAS contamination.

Conclusions

The study underscores the necessity for source and pathway control measures to mitigate PFAS pollution, the implementation of advanced treatment technologies to safeguard drinking water and surface water quality, and targeted remediation for legacy soil and groundwater contamination. Additionally, strong use regulations should be explored to minimize ongoing emissions. The multi-compartment monitoring proves to be a crucial approach to understand the complexity of PFAS distribution at the catchment scale. Comparative analysis and risk assessment highlight challenging situations for water management, offering an indispensable basis for emission modeling as a next step for quantitative assessment of the relevance of different sources and pathways for surface water pollution.

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