{"type": "FeatureCollection", "features": [{"id": "10.1007/s10661-023-11079-y", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:36Z", "type": "Journal Article", "created": "2023-03-25", "title": "Evaluating the impacts of sustainable land management practices on water quality in an agricultural catchment in Lower Austria using SWAT", "description": "Abstract <p>Managing agricultural watersheds in an environmentally friendly manner necessitate the strategic implementation of well-targeted sustainable land management (SLM) practices that limit soil and nonpoint source pollution losses and translocation. Watershed-scale SLM-scenario modeling has the potential to identify efficient and effective management strategies from the field to the integrated landscape level. In a case study targeting a 66-hectare watershed in Petzenkirchen, Lower Austria, the Soil and Water Assessment Tool (SWAT) was utilized to evaluate a variety of locally adoptable SLM practices. SWAT was calibrated and validated (monthly) at the catchment outlet for flow, sediment, nitrate-nitrogen (NO3\uffe2\uff80\uff93N), ammonium nitrogen (NH4\uffe2\uff80\uff93N), and mineralized phosphorus (PO4\uffe2\uff80\uff93P) using SWATplusR. Considering the locally existing agricultural practices and socioeconomic and environmental factors of the research area, four conservation practices were evaluated: baseline scenario, contour farming (CF), winter cover crops (CC), and a combination of no-till and cover crops (NT\uffe2\uff80\uff89+\uffe2\uff80\uff89CC). The NT\uffe2\uff80\uff89+\uffe2\uff80\uff89CC SLM practice was found to be the most effective soil conservation practice in reducing soil loss by around 80%, whereas CF obtained the best results for decreasing the nutrient loads of NO3\uffe2\uff80\uff93N and PO4\uffe2\uff80\uff93P by 11% and 35%, respectively. The findings of this study imply that the setup SWAT model can serve the context-specific performance assessment and eventual promotion of SLM interventions that mitigate on-site land degradation and the consequential off-site environmental pollution resulting from agricultural nonpoint sources.</p", "keywords": ["Agricultural and Biological Sciences", "Soil", "Context (archaeology)", "Engineering", "Water Quality", "Soil water", "Water Science and Technology", "Watershed Management", "2. Zero hunger", "Geography", "Ecology", "Life Sciences", "Soil and Water Assessment Tool", "Agriculture", "Hydrology (agriculture)", "6. Clean water", "Soil Erosion and Agricultural Sustainability", "Water resource management", "Hydrological Modeling and Water Resource Management", "Water quality", "Archaeology", "Austria", "Physical Sciences", "SWAT model", "Environmental Monitoring", "Cartography", "Conservation of Natural Resources", "Biogeochemical Cycling of Nutrients in Aquatic Ecosystems", "Drainage basin", "Nitrogen", "Soil Science", "Streamflow", "Article", "Environmental science", "Soil quality", "Machine learning", "Environmental Chemistry", "Civil engineering", "Biology", "Nonpoint source pollution", "Soil science", "15. Life on land", "Watershed Simulation", "Watershed management", "Watershed", "Computer science", "Geotechnical engineering", "13. Climate action", "FOS: Biological sciences", "Environmental Science", "Land use", "FOS: Civil engineering"]}, "links": [{"href": "https://doi.org/10.1007/s10661-023-11079-y"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Monitoring%20and%20Assessment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10661-023-11079-y", "name": "item", "description": "10.1007/s10661-023-11079-y", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10661-023-11079-y"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-03-25T00:00:00Z"}}, {"id": "10.1007/s10980-020-00984-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:39Z", "type": "Journal Article", "created": "2020-03-10", "title": "Global vulnerability of soil ecosystems to erosion", "description": "Abstract Context <p>Soil erosion is one of the main threats driving soil degradation across the globe with important impacts on crop yields, soil biota, biogeochemical cycles, and ultimately human nutrition.</p>  Objectives <p>Here, using an empirical model, we present a global and temporally explicit assessment of soil erosion risk according to recent (2001\uffe2\uff80\uff932013) dynamics of rainfall and vegetation cover change to identify vulnerable areas for soils and soil biodiversity.</p>  Methods <p>We used an adaptation of the Universal Soil Loss Equation together with state of the art remote sensing models to create a spatially and temporally explicit global model of soil erosion and soil protection. Finally, we overlaid global maps of soil biodiversity to assess the potential vulnerability of these soil communities to soil erosion.</p>  Results <p>We show a consistent decline in soil erosion protection over time across terrestrial biomes, which resulted in a global increase of 11.7% in soil erosion rates. Notably, soil erosion risk systematically increased between 2006 and 2013 in relation to the baseline year (2001). Although vegetation cover is central to soil protection, this increase was mostly driven by changes in rainfall erosivity. Globally, soil erosion is expected not only to have an impact on the vulnerability of soil conditions but also on soil biodiversity with 6.4% (for soil macrofauna) and 7.6% (for soil fungi) of these vulnerable areas coinciding with regions with high soil biodiversity.</p>  Conclusions <p>Our results indicate that an increasing proportion of soils are degraded globally, affecting not only livelihoods but also potentially degrading local and regional landscapes. Similarly, many degraded regions coincide with and may have impacted high levels of soil biodiversity.</p", "keywords": ["2. Zero hunger", "0301 basic medicine", "ddc:577", "570", "0303 health sciences", "550", "[SDV]Life Sciences [q-bio]", "577", "15. Life on land", "Article", "[SDV] Life Sciences [q-bio]", "03 medical and health sciences", "13. Climate action", "11. Sustainability", "ddc:570", "Soil erosion", " Soil protection", " Temporally explicit", " Belowground biodiversity", " Ecosystem service supply", " Mapping"]}, "links": [{"href": "https://iris.cnr.it/bitstream/20.500.14243/465465/1/s10980-020-00984-z.pdf"}, {"href": "http://link.springer.com/content/pdf/10.1007/s10980-020-00984-z.pdf"}, {"href": "https://doi.org/10.1007/s10980-020-00984-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Landscape%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10980-020-00984-z", "name": "item", "description": "10.1007/s10980-020-00984-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10980-020-00984-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-10T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2024.117154", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:43Z", "type": "Journal Article", "created": "2024-12-26", "title": "Separating fast from slow cycling soil organic carbon \u2013 A multi-method comparison on land use change sites", "description": "Soil organic carbon (SOC) is significantly affected by land use change (LUC). Consequently, LUC is a major controlling factor of total SOC contents and SOC pool dynamics. Several methods have been developed to assess distinct SOC pools, which includes particle size separation, thermal analysis and soil reflectance mid-infrared spectroscopy. All of which are considered to have a potential as high through put methods to generate large datasets. Here, we used 23 sites covering six different types of LUC to assess differences in fast and slow cycling SOC derived from three approaches. We used i) particle size fractionation to obtain coarse (>50\u00a0\u00a0\u00b5m) and fine (<50\u00a0\u00a0\u00b5m) SOC fractions; ii) thermal Rock-Eval\u00ae 6 analysis in compilation with the PARTYSOCv2.0EU model to estimate active and stable SOC pools and iii) mid-infrared spectroscopy to determine the relative SOC composition and derive fast (aliphatic compounds) and slow (aromatic/carboxylic compounds) cycling SOC pools. The particle size SOC fractions and thermal SOC pools showed similar dynamics but differed substantially in the magnitude with LUC. The fine SOC fraction contained around two-thirds of the total SOC across all land uses and was strongly responsive by nearly matching the relative changes of total SOC (slope of 0.76 and R2\u00a0=\u00a00.91). Therefore, the fine fraction SOC might be more dynamic than considered until now. In comparison, the stable SOC pool calculated using PARTYSOCv2.0EU was less responsive to the relative changes (slope of 0.43 and R2\u00a0=\u00a00.72) and contained around 40\u00a0% of the total SOC. This underlines that both physical and thermal approaches separate biogeochemically distinct pools. The qualitative assessment by mid-infrared spectroscopy related well to the thermal SOC pools but not to the particle size fractions. The initial land-use SOC composition, as a ratio of the corresponding fast and slow cycling SOC pool, can be a suitable predictor for SOC evolution. This was particularly true for thermal and mid-infrared spectroscopy derived SOC pools. We show that three conceptually different methods (physical, thermal and mid-infrared spectroscopic) are suitable to determine SOC pool changes for a large diversity of LUC, but the sensitivity of the individual pools can differ strongly, depending on the method.", "keywords": ["Particle size fractionation", "Science", "Q", "Rock-Eval\u00ae analysis", "Cropland", "Forest", "Grassland", "Mid-infrared spectroscopy"], "contacts": [{"organization": "Schiedung, Marcus, Barr\u00b4e, Pierre, Peoplau, Christopher,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2024.117154"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2024.117154", "name": "item", "description": "10.1016/j.geoderma.2024.117154", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2024.117154"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-01T00:00:00Z"}}, {"id": "10.1007/s42832-021-0077-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:55Z", "type": "Journal Article", "created": "2021-03-13", "title": "Research trends of microplastics in the soil environment: Comprehensive screening of effects", "description": "Abstract<p>We collated and synthesized previous studies that reported the impacts of microplastics on soil parameters. The data were classified and integrated to screen for the proportion of significant effects, then we suggest several directions to alleviate the current data limitation in future experiments. We compiled 106 datasets capturing significant effects, which were analyzed in detail. We found that polyethylene and pellets (or powders) were the most frequently used microplastic composition and shape for soil experiments. The significant effects mainly occurred in broad size ranges (0.1\uffe2\uff80\uff931 mm) at test concentrations of 0.1%\uffe2\uff80\uff9310% based on soil dry weight. Polyvinyl chloride and film induced significant effects at lower concentrations compared to other compositions and shapes, respectively. We adopted a species sensitivity distribution (SSD) and soil property effect distribution (SPED) method using available data from soil biota, and for soil properties and enzymes deemed relevant for microplastic management. The predicted-no-effect-concentration (PNEC)-like values needed to protect 95% of soil biota and soil properties was estimated to be between 520 and 655 mg kg\uffe2\uff88\uff921. This study was the first to screen microplastic levels with a view toward protecting the soil system. Our results should be regularly updated (e.g., quarterly) with additional data as they become available.</p>", "keywords": ["Significant effect", "2. Zero hunger", "570", "Soil", "Species sensitivity distribution", "0211 other engineering and technologies", "Soil ; Significant effect ; Soil properties ; Microplastics in agroecosystems ; Species sensitivity distribution ; Research Article", "Soil properties", "500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; Biologie", "02 engineering and technology", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s42832-021-0077-3.pdf"}, {"href": "https://doi.org/10.1007/s42832-021-0077-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Ecology%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s42832-021-0077-3", "name": "item", "description": "10.1007/s42832-021-0077-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s42832-021-0077-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-03-13T00:00:00Z"}}, {"id": "10.1007/s11044-018-09644-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:39Z", "type": "Journal Article", "created": "2018-10-19", "title": "A modal derivatives enhanced Rubin substructuring method for geometrically nonlinear multibody systems", "description": "Open AccessISSN:1384-5640", "keywords": ["Geometric nonlinearity; Floating frame of reference; Modal derivatives; Rubin substructuring; Mean-axis frame", "Geometric nonlinearity", "Mean-axis frame", "518", "0211 other engineering and technologies", "Rubin substructuring", "Floating frame of reference", "02 engineering and technology", "Article", "Modal derivatives", "0201 civil engineering"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s11044-018-09644-2.pdf"}, {"href": "https://doi.org/10.1007/s11044-018-09644-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Multibody%20System%20Dynamics", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11044-018-09644-2", "name": "item", "description": "10.1007/s11044-018-09644-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11044-018-09644-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-10-19T00:00:00Z"}}, {"id": "10.1007/s11104-013-1604-5", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:44Z", "type": "Journal Article", "created": "2013-01-30", "title": "Soil Co2 Efflux In A Bioenergy Plantation With Fast-Growing Populus Trees - Influence Of Former Land Use, Inter-Row Spacing And Genotype", "description": "In this study we quantified the annual soil CO2 efflux (annual SCE) of a short rotation coppice plantation in its establishment phase. We aimed to examine the effect of former (agricultural) land use type, inter-row spacing and genotype.Annual SCE was quantified during the second growth year of the establishment rotation in a large scale poplar plantation in Flanders. Automated chambers were distributed over the two former land use types, the two different inter-row spacings and under two poplar genotypes. Additional measurements of C, N, P, K, Mg, Ca and Na concentrations of the soil, pH, bulk density, fine root biomass, microbial biomass C, soil mineralization rate, distance to trees and tree diameters were performed at the end of the second growth year.Total carbon loss from soil CO2 efflux was valued at 589\u00a0g m-2 yr-1. Annual SCE was higher in former pasture as compared to cropland, higher in the narrow than in the wider inter-row spacings, but no effect of genotype was found.Spatial differences in site characteristics are of great importance for understanding the effect of ecosystem management and land use change on soil respiration processes and need to be taken into account in modeling efforts of the carbon balance.", "keywords": ["2. Zero hunger", "Soil Science", "0401 agriculture", " forestry", " and fisheries", "Regular Article", "Plant Science", "04 agricultural and veterinary sciences", "15. Life on land", "Biology"]}, "links": [{"href": "https://doi.org/10.1007/s11104-013-1604-5"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-013-1604-5", "name": "item", "description": "10.1007/s11104-013-1604-5", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-013-1604-5"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-01-31T00:00:00Z"}}, {"id": "10.1016/j.agee.2017.01.029", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:04Z", "type": "Journal Article", "created": "2017-02-07", "title": "Impact Of Reduced Tillage On Greenhouse Gas Emissions And Soil Carbon Stocks In An Organic Grass-Clover Ley - Winter Wheat Cropping Sequence", "description": "Organic reduced tillage aims to combine the environmental benefits of organic farming and conservation tillage to increase sustainability and soil quality. In temperate climates, there is currently no knowledge about its impact on greenhouse gas emissions and only little information about soil organic carbon (SOC) stocks in these management systems. We therefore monitored nitrous oxide (N2O) and methane (CH4) fluxes besides SOC stocks for two years in a grass-clover ley - winter wheat - cover crop sequence. The monitoring was undertaken in an organically managed long-term tillage trial on a clay rich soil in Switzerland. Reduced tillage (RT) was compared with ploughing (conventional tillage, CT) in interaction with two fertilisation systems, cattle slurry alone (SL) versus cattle manure compost and slurry (MC). Median N2O and CH4 flux rates were 13\u00a0\u03bcg N2O-N\u00a0m-2\u00a0h-1 and -2\u00a0\u03bcg CH4C\u00a0m-2\u00a0h-1, respectively, with no treatment effects. N2O fluxes correlated positively with nitrate contents, soil temperature, water filled pore space and dissolved organic carbon and negatively with ammonium contents in soil. Pulse emissions after tillage operations and slurry application dominated cumulative gas emissions. N2O emissions after tillage operations correlated with SOC contents and collinearly to microbial biomass. There was no tillage system impact on cumulative N2O emissions in the grass-clover (0.8-0.9\u00a0kg\u00a0N2O-N\u00a0ha-1, 369\u00a0days) and winter wheat (2.1-3.0\u00a0kg N2O-N\u00a0ha-1, 296\u00a0days) cropping seasons, with a tendency towards higher emissions in MC than SL in winter wheat. Including a tillage induced peak after wheat harvest, a full two year data set showed increased cumulative N2O emissions in RT than CT and in MC than SL. There was no clear treatment influence on cumulative CH4 uptake. Topsoil SOC accumulation (0-0.1\u00a0m) was still ongoing. SOC stocks were more stratified in RT than CT and in MC than SL. Total SOC stocks (0-0.5\u00a0m) were higher in RT than CT in SL and similar in MC. Maximum relative SOC stock difference accounted for +8.1\u00a0Mg\u00a0C\u00a0ha-1 in RT-MC compared to CT-SL after 13 years which dominated over the relative increase in greenhouse gas emissions. Under these site conditions, organic reduced tillage and manure compost application seems to be a viable greenhouse gas mitigation strategy as long as SOC is sequestered.", "keywords": ["2. Zero hunger", "Ecology", "04 agricultural and veterinary sciences", "15. Life on land", "Air and water emissions", "7. Clean energy", "Soil quality", "Soil tillage", "Article", "6. Clean water", "12. Responsible consumption", "13. Climate action", "11. Sustainability", "0401 agriculture", " forestry", " and fisheries", "Animal Science and Zoology", "Agronomy and Crop Science"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2017.01.029"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2017.01.029", "name": "item", "description": "10.1016/j.agee.2017.01.029", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2017.01.029"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-02-01T00:00:00Z"}}, {"id": "10.1016/j.acax.2019.100005", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:56Z", "type": "Journal Article", "created": "2019-01-10", "title": "Automated supervised learning pipeline for non-targeted GC-MS data analysis", "description": "Non-targeted analysis is nowadays applied in many different domains of analytical chemistry such as metabolomics, environmental and food analysis. Conventional processing strategies for GC-MS data include baseline correction, feature detection, and retention time alignment before multivariate modeling. These techniques can be prone to errors and therefore time-consuming manual corrections are generally necessary. We introduce here a novel fully automated approach to non-targeted GC-MS data processing. This new approach avoids feature extraction and retention time alignment. Supervised machine learning on decomposed tensors of segmented chromatographic raw data signal is used to rank regions in the chromatograms contributing to differentiation between sample classes. The performance of this novel data analysis approach is demonstrated on three published datasets.", "keywords": ["0301 basic medicine", "0303 health sciences", "03 medical and health sciences", "Article"]}, "links": [{"href": "https://doi.org/10.1016/j.acax.2019.100005"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Analytica%20Chimica%20Acta%3A%20X", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.acax.2019.100005", "name": "item", "description": "10.1016/j.acax.2019.100005", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.acax.2019.100005"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-03-01T00:00:00Z"}}, {"id": "10.1007/s40265-021-01505-1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:55Z", "type": "Journal Article", "created": "2021-04-30", "title": "Preclinical and Clinical Characteristics of the Trichuricidal Drug Oxantel Pamoate and Clinical Development Plans: A Review", "description": "Soil-transmitted helminths (Ascaris lumbricoides, hookworm and Trichuris trichiura) infect about one-fifth of the world's population. The currently available drugs are all highly efficacious against A. lumbricoides. However, they are only moderately efficacious against hookworm and poorly efficacious against T. trichiura. Oxantel, a tetrahydropyrimidine derivative discovered in the 1970s, has recently been brought back to our attention given its high efficacy against T. trichiura infections (estimated 76% cure rate and 85% egg reduction rate at a 20 mg/kg dose). This review summarizes the current knowledge on oxantel pamoate and its use against T. trichiura infections in humans. Oxantel pamoate acts locally in the human gastrointestinal tract and binds to the parasite's nicotinic acetylcholine receptor (nAChR), leading to a spastic paralysis of the worm and subsequent expulsion. The drug is metabolically stable, shows low permeability and low systemic bioavailability after oral use. Oxantel pamoate was found to be safe in humans, with only a few mild adverse events reported. Several clinical trials have investigated the efficacy of this drug against T. trichiura\u00a0and suggest that oxantel pamoate is more efficacious against T. trichiura than the currently recommended drugs, which makes it a strong asset to the depleted drug armamentarium and could help delay or even prevent the development of resistance to existing drugs. We highlight existing data to support the use of oxantel pamoate against T. trichiura infections.", "keywords": ["Hookworm Infections", "03 medical and health sciences", "Trichuris", "0302 clinical medicine", "Dose-Response Relationship", " Drug", "Antinematodal Agents", "Pyrantel Pamoate", "Animals", "Humans", "Drug Interactions", "Review Article", "3. Good health"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s40265-021-01505-1.pdf"}, {"href": "https://doi.org/10.1007/s40265-021-01505-1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Drugs", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s40265-021-01505-1", "name": "item", "description": "10.1007/s40265-021-01505-1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s40265-021-01505-1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-30T00:00:00Z"}}, {"id": "10.1016/j.agee.2003.12.008", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:57Z", "type": "Journal Article", "created": "2004-02-05", "title": "Effects Of Forest Conversion To Pasture On Soil Carbon Content And Dynamics In Brazilian Amazonia", "description": "Abstract   Soils play an important role in the carbon cycle, and deforestation in the tropics affects both soil carbon storage and CO2 release into the atmosphere. The consequences of deforestation and conversion to pasture for soil carbon content and dynamics were examined in two soil types differing mainly by their texture. Two chronosequences were selected, each consisting of an intact forest and three pastures of different ages (4, 8, 15 years and 3, 9, 15 years, respectively). One chronosequence is located in the central part of the Brazilian Amazon basin, where the soils are clayey ferralsols, and the second in the Eastern Brazilian Amazon Basin, where the soils are sandy clayey acrisols. In the upper layer the C content of clayey soils was three times higher than in the sandy soils, but despite the differences in soil texture, the C distribution in the particle-size fractions was quite similar. In the two chronosequences, the conversion to pasture induced a slight increase in C content. Bulk density increases were greater on soils with lower clay contents. The       13   C    measurements, which allowed to calculate the distribution of C derived from forest and from pasture, showed that all the particle-size fractions incorporated C derived from pasture and that a significant proportion of the young organic matter is rapidly trapped in the finest fractions. Although the proportions of pasture-derived C were higher in the sandy soils than in the clayey soils, the amounts of pasture-derived C in the particle-size fractions were 2\u20133 times larger in the clayey soils than in the sandy soils.", "keywords": ["rain-forest", "550", "ZONE TROPICALE", "c-13 natural abundance", "TEXTURE", "[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study", "630", "Carbon Cycle", "C-13 isotope", "Amazonia", "EVOLUTION DES SOLS SOUS CULTURE", "STRUCTURE DU SOL", "soil carbon storage", "particle-size fractions", "Pasture", "cultivated oxisols", "ANALYSE ISOTOPIQUE", "SABLE", "eastern amazonia", "Deforestation", "[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil study", "Acrisol", "2. Zero hunger", "tropical soils Organic-matter dynamics", "Brasil", "size-fractions", "PATURAGE", "turnover", "Soil Carbon", "04 agricultural and veterinary sciences", "South America", "15. Life on land", "CARBONE ORGANIQUE", "STOCK ORGANIQUE", "ARGILE", "0401 agriculture", " forestry", " and fisheries", "DEFORESTATION", "texture"], "contacts": [{"organization": "Desjardins, T., Barros, E., Sarrazin, M., Girardin, C., Mariotti, A.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2003.12.008"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2003.12.008", "name": "item", "description": "10.1016/j.agee.2003.12.008", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2003.12.008"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-07-01T00:00:00Z"}}, {"id": "10.1007/s42832-021-0114-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:55Z", "type": "Journal Article", "created": "2021-08-25", "title": "Tire abrasion particles negatively affect plant growth even at low concentrations and alter soil biogeochemical cycling", "description": "Abstract<p>Tire particles (TPs) are a major source of microplastic on land, and considering their chemical composition, they represent a potential hazard for the terrestrial environment. We studied the effects of TPs at environmentally relevant concentrations along a wide concentration gradient (0\uffe2\uff80\uff93160 mg g\uffe2\uff88\uff921) and tested the effects on plant growth, soil pH and the key ecosystem process of litter decomposition and soil respiration. The addition of TPs negatively affected shoot and root growth already at low concentrations. Tea litter decomposition slightly increased with lower additions of TPs but decreased later on. Soil pH increased until a TP concentration of 80 mg g\uffe2\uff88\uff921 and leveled off afterwards. Soil respiration clearly increased with increasing concentration of added TPs. Plant growth was likely reduced with starting contamination and stopped when contamination reached a certain level in the soil. The presence of TPs altered a number of biogeochemical soil parameters that can have further effects on plant performance. Considering the quantities of yearly produced TPs, their persistence, and toxic potential, we assume that these particles will eventually have a significant impact on terrestrial ecosystems.</p>", "keywords": ["570", "Soil respiration ; Soil pH ; Litter decomposition ; Microplastic pollution ; Tire particles ; Soil Pollution", " Control", " and Remediation ; Research Article ; Plant growth", "Litter decomposition", "Soil respiration", "Soil pH", "500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; Biologie", "04 agricultural and veterinary sciences", "15. Life on land", "Microplastic pollution", "01 natural sciences", "6. Clean water", "13. Climate action", "Tire particles", "0401 agriculture", " forestry", " and fisheries", "Plant growth", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s42832-021-0114-2.pdf"}, {"href": "https://doi.org/10.1007/s42832-021-0114-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Ecology%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s42832-021-0114-2", "name": "item", "description": "10.1007/s42832-021-0114-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s42832-021-0114-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-20T00:00:00Z"}}, {"id": "10.1007/s11104-019-03939-9", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:46Z", "type": "Journal Article", "created": "2019-02-01", "title": "Surface tension, rheology and hydrophobicity of rhizodeposits and seed mucilage influence soil water retention and hysteresis", "description": "Rhizodeposits collected from hydroponic solutions with roots of maize and barley, and seed mucilage washed from chia, were added to soil to measure their impact on water retention and hysteresis in a sandy loam soil at a range of concentrations. We test the hypothesis that the effect of plant exudates and mucilages on hydraulic properties of soils depends on their physicochemical characteristics and origin.Surface tension and viscosity of the exudate solutions were measured using the Du No\u00fcy ring method and a cone-plate rheometer, respectively. The contact angle of water on exudate treated soil was measured with the sessile drop method. Water retention and hysteresis were measured by equilibrating soil samples, treated with exudates and mucilages at 0.46 and 4.6\u00a0mg\u00a0g-1 concentration, on dialysis tubing filled with polyethylene glycol (PEG) solution of known osmotic potential.Surface tension decreased and viscosity increased with increasing concentration of the exudates and mucilage in solutions. Change in surface tension and viscosity was greatest for chia seed exudate and least for barley root exudate. Contact angle increased with increasing maize root and chia seed exudate concentration in soil, but not barley root. Chia seed mucilage and maize root rhizodeposits enhanced soil water retention and increased hysteresis index, whereas barley root rhizodeposits decreased soil water retention and the hysteresis effect. The impact of exudates and mucilages on soil water retention almost ceased when approaching wilting point at -1500\u00a0kPa matric potential.Barley rhizodeposits behaved as surfactants, drying the rhizosphere at smaller suctions. Chia seed mucilage and maize root rhizodeposits behaved as hydrogels that hold more water in the rhizosphere, but with slower rewetting and greater hysteresis.", "keywords": ["DYNAMICS", "/dk/atira/pure/subjectarea/asjc/1100/1111", "seed exudate", "FLOW", "QH301 Biology", "/dk/atira/pure/subjectarea/asjc/1100/1110", "root exudate", "630", "QH301", "soil water retention", "ROOT", "surface tension", "DIMR 646809", "Contact angle", "contact angle", "PHOSPHOLIPID SURFACTANTS", "2. Zero hunger", "STABILITY", "BB/J000868/1", "Surface tension", "Civil_env_eng", "Viscosity", "Hysteresis", "name=Soil Science", "Root exudate", "RHIZOSPHERE HYDRAULIC-PROPERTIES", "EXUDATION", "Regular Article", "04 agricultural and veterinary sciences", "15. Life on land", "540", "Soil water retention", "6. Clean water", "Seed exudate", "BB/J011460/1", "hysteresis", "BB/L026058/1", "viscosity", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "name=Plant Science", "MAIZE", "BB/P004180/1", "European Research Council"]}, "links": [{"href": "https://repository.uwl.ac.uk/id/eprint/5787/1/Naveed2019_Article_SurfaceTensionRheologyAndHydro.pdf"}, {"href": "https://eprints.soton.ac.uk/428238/1/Naveed2019_Article_SurfaceTensionRheologyAndHydro.pdf"}, {"href": "http://link.springer.com/content/pdf/10.1007/s11104-019-03939-9.pdf"}, {"href": "https://doi.org/10.1007/s11104-019-03939-9"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-019-03939-9", "name": "item", "description": "10.1007/s11104-019-03939-9", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-019-03939-9"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-02-02T00:00:00Z"}}, {"id": "10.1007/s11104-022-05519-w", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:47Z", "type": "Journal Article", "created": "2022-06-04", "title": "A quick and simple spectrophotometric method to determine total carbon concentrations in root exudate samples of grass species", "description": "Abstract                 Purpose                 <p>Root exudates are key components driving belowground interaction between plant, microbes and soil. High-end analytical approaches provide advanced insights into exudate metabolite diversity, however, the amount of total carbon (C) released by roots should always be determined as the most basic parameter when characterizing root exudation as it (i) provides quantitative information of C exuded into the surrounding soil and (ii) allows to relate the abundance of individual exudate compounds to total C released. Here we propose a simple and quick, spectrophotometry-based method to quantify total dissolved organic carbon (DOC) concentration in exudation samples that is based on measuring the absorption of a pre-filtered but otherwise untreated exudate sample at 260\uffc2\uffa0nm (DOC260).</p>                                Method                 <p>Exudate samples collected from different grass genotypes (Zea mays, Oryza sativa, Hordeum vulgare) grown in various experimental settings (soil, hydroponic) were analysed with the DOC260 assay and results were compared with C concentrations obtained by liquid TOC-analyser.</p>                                Conclusion                 <p>We demonstrated that the DOC260 method allowed for quick and inexpensive measurements of total dissolved organic carbon concentrations in exudate samples from grass species grown under nutrient sufficient as well as under P deficient conditions. Interestingly, DOC260 failed to predict DOC concentrations in exudate samples from plants grown under Zn and Fe deficiency suggesting a strong shift in metabolite composition under micronutrient deficiency. Even though the applicability of the DOC260 method remains to be tested on exudate samples originating from dicots and plants exposed to other environmental stresses (e.g. pathogen attack, heavy metal stress, etc), it will help to increase our understanding of root exudation and related rhizosphere processes in the future.</p>", "keywords": ["0301 basic medicine", "2. Zero hunger", "03 medical and health sciences", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Research Article"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s11104-022-05519-w.pdf"}, {"href": "https://doi.org/10.1007/s11104-022-05519-w"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-022-05519-w", "name": "item", "description": "10.1007/s11104-022-05519-w", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-022-05519-w"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-06-04T00:00:00Z"}}, {"id": "10.1007/s11104-022-05530-1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:47Z", "type": "Journal Article", "created": "2022-06-11", "title": "Impact of root hairs on microscale soil physical properties in the field", "description": "Abstract                  Aims                 <p>Recent laboratory studies revealed that root hairs may alter soil physical behaviour, influencing soil porosity and water retention on the small scale. However, the results are not consistent, and it is not known if structural changes at the small-scale have impacts at larger scales. Therefore, we evaluated the potential effects of root hairs on soil hydro-mechanical properties in the field using rhizosphere-scale physical measurements.</p>                                Methods                 <p>Changes in soil water retention properties as well as mechanical and hydraulic characteristics were monitored in both silt loam and sandy loam soils. Measurements were taken from plant establishment to harvesting in field trials, comparing three barley genotypes representing distinct phenotypic categories in relation to root hair length. Soil hardness and elasticity were measured using a 3-mm-diameter spherical indenter, while water sorptivity and repellency were measured using a miniaturized infiltrometer with a 0.4-mm tip radius.</p>                                Results                 <p>Over the growing season, plants induced changes in the soil water retention properties, with the plant available water increasing by 21%. Both soil hardness (P\uffe2\uff80\uff89=\uffe2\uff80\uff890.031) and elasticity (P\uffe2\uff80\uff89=\uffe2\uff80\uff890.048) decreased significantly in the presence of root hairs in silt loam soil, by 50% and 36%, respectively. Root hairs also led to significantly smaller water repellency (P\uffe2\uff80\uff89=\uffe2\uff80\uff890.007) in sandy loam soil vegetated with the hairy genotype (-49%) compared to the hairless mutant.</p>                                Conclusions                 <p>Breeding of cash crops for improved soil conditions could be achieved by selecting root phenotypes that ameliorate soil physical properties and therefore contribute to increased soil health.</p>", "keywords": ["/dk/atira/pure/subjectarea/asjc/1100/1111", "0106 biological sciences", "Supplementary Data", "QH301 Biology", "/dk/atira/pure/subjectarea/asjc/1100/1110", "Soil Science", "Rural and Environmental Science and Analytical Services (RESAS)", "Plant Science", "01 natural sciences", "630", "QH301", "BBSRC BB/L025825/1", "Barley", "Soil health", "Soil structure", "Root hairs", "Soil hydromechanical properties", "BB/L025620/1", "580", "2. Zero hunger", "name=Soil Science", "ERCDMR-646809", "04 agricultural and veterinary sciences", "15. Life on land", "Soil water retention", "BBSRC BB/J00868/1", "6. Clean water", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "Other", "name=Plant Science", "Research Article"]}, "links": [{"href": "https://eprints.soton.ac.uk/484590/2/s11104_022_05530_1.pdf"}, {"href": "https://link.springer.com/content/pdf/10.1007/s11104-022-05530-1.pdf"}, {"href": "https://doi.org/10.1007/s11104-022-05530-1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-022-05530-1", "name": "item", "description": "10.1007/s11104-022-05530-1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-022-05530-1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-06-11T00:00:00Z"}}, {"id": "10.1007/s11104-019-04308-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:46Z", "type": "Journal Article", "created": "2019-12-06", "title": "Significance of root hairs at the field scale \u2013 modelling root water and phosphorus uptake under different field conditions", "description": "Abstract                                Background and aims                 <p>Root hairs play a significant role in phosphorus (P) extraction at the pore scale. However, their importance at the field scale remains poorly understood.</p>                                Methods                 <p>This study uses a continuum model to explore the impact of root hairs on the large-scale uptake of P, comparing root hair influence under different agricultural scenarios. High vs low and constant vs decaying P concentrations down the soil profile are considered, along with early vs late precipitation scenarios.</p>                                Results                 <p>Simulation results suggest root hairs accounted for 50% of total P uptake by plants. Furthermore, a delayed initiation time of precipitation potentially limits the P uptake rate by over 50% depending on the growth period. Despite the large differences in the uptake rate, changes in the soil P concentration in the domain due to root solute uptake remains marginal when considering a single growth season. However, over the duration of 6\uffc2\uffa0years, simulation results showed that noticeable differences arise over time.</p>                                Conclusion                 <p>Root hairs are critical to P capture, with uptake efficiency potentially enhanced by coordinating irrigation with P application during earlier growth stages of crops.</p>", "keywords": ["/dk/atira/pure/subjectarea/asjc/1100/1111", "0106 biological sciences", "330", "550", "EP/M020355/1", "ERC 646809 DIMR", "QH301 Biology", "/dk/atira/pure/subjectarea/asjc/1100/1110", "Soil Science", "A. B", "Field", "610", "Plant Science", "01 natural sciences", "NERC NE/L00237/1", "QH301", "Soil", "Plant roots", "Root hairs", "BBSRC SARIC BB/P004180/", "2. Zero hunger", "BBSRC SARISA BB/L025620/1. S. D.", "Mathematical modelling", "Natural Environment Research Council (NERC)", "name=Soil Science", "Water", "Phosphorus", "Regular Article", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water", "Engineering and Physical Sciences Research Council (EPSRC)", "Rhizosphere", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "name=Plant Science", "European Research Council"]}, "links": [{"href": "https://eprints.soton.ac.uk/434043/1/Manuscript_No_Tracked_Changes.pdf"}, {"href": "http://link.springer.com/content/pdf/10.1007/s11104-019-04308-2.pdf"}, {"href": "https://doi.org/10.1007/s11104-019-04308-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-019-04308-2", "name": "item", "description": "10.1007/s11104-019-04308-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-019-04308-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-06T00:00:00Z"}}, {"id": "10.1007/s11104-019-04376-4", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:46Z", "type": "Journal Article", "created": "2019-12-05", "title": "Quantifying citrate-enhanced phosphate root uptake using microdialysis", "description": "Abstract                 Aims                 <p>Organic acid exudation by plant roots is thought to promote phosphate (P) solubilisation and bioavailability in soils with poorly available nutrients. Here we describe a new combined experimental (microdialysis) and modelling approach to quantify citrate-enhanced P desorption and its importance for root P uptake.</p>                                Methods                 <p>To mimic the rhizosphere, microdialysis probes were placed in soil and perfused with citrate solutions (0.1, 1.0 and 10\uffc2\uffa0mM) and the amount of P recovered from soil used to quantify rhizosphere P availability. Parameters in a mathematical model describing probe P uptake, citrate exudation, P movement and citrate-enhanced desorption were fit to the experimental data. These parameters were used in a model of a root which exuded citrate and absorbed P. The importance of soil citrate-P mobilisation for root P uptake was then quantified using this model.</p>                                Results                 <p>A plant needs to exude citrate at a rate of 0.73\uffc2\uffa0\uffce\uffbcmol\uffc2\uffa0cm\uffe2\uff88\uff921 of root h\uffe2\uff88\uff921 to see a significant increase in P absorption. Microdialysis probes with citrate in the perfusate were shown to absorb similar quantities of P to an exuding root.</p>                                Conclusion                 <p>A single root exuding citrate at a typical rate (4.3\uffe2\uff80\uff89\uffc3\uff97\uffe2\uff80\uff8910\uffe2\uff88\uff925 \uffce\uffbcmol m\uffe2\uff88\uff921 of root h\uffe2\uff88\uff921) did not contribute significantly to P uptake. Microdialysis probes show promise for measuring rhizosphere processes when calibration experiments and mathematical modelling are used to decouple microdialysis and rhizosphere mechanisms.</p>", "keywords": ["2. Zero hunger", "615", "0401 agriculture", " forestry", " and fisheries", "Regular Article", "634", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "6. Clean water", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s11104-019-04376-4.pdf"}, {"href": "https://doi.org/10.1007/s11104-019-04376-4"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-019-04376-4", "name": "item", "description": "10.1007/s11104-019-04376-4", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-019-04376-4"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-05T00:00:00Z"}}, {"id": "10.1007/s11104-021-05133-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:46Z", "type": "Journal Article", "created": "2021-09-12", "title": "In situ laser manipulation of root tissues in transparent soil", "description": "AbstractAims<p>Laser micromanipulation such as dissection or optical trapping enables remote physical modification of the activity of tissues, cells and organelles. To date, applications of laser manipulation to plant roots grown in soil have been limited. Here, we show laser manipulation can be applied in situ when plant roots are grown in transparent soil.</p>Methods<p>We have developed a Q-switched laser manipulation and imaging instrument to perform controlled dissection of roots and to study light-induced root growth responses. We performed a detailed characterisation of the properties of the cutting beams through the soil, studying dissection and optical ablation. Furthermore, we also studied the use of low light doses to control the root elongation rate of lettuce seedlings (Lactuca sativa) in air, agar, gel and transparent soil.</p>Results<p>We show that whilst soil inhomogeneities affect the thickness and circularity of the beam, those distortions are not inherently limiting. The ability to induce changes in root elongation or complete dissection of microscopic regions of the root is robust to substrate heterogeneity and microscopy set up and is maintained following the limited distortions induced by the transparent soil environment.</p>Conclusions<p>Our findings show that controlled in situ laser dissection of root tissues is possible with a simple and low-cost optical set-up. We also show that, in the absence of dissection, a reduced laser light power density can provide reversible control of root growth, achieving a precise \uffe2\uff80\uff9cpoint and shoot\uffe2\uff80\uff9d method for root manipulation.</p", "keywords": ["Transparent soil", "/dk/atira/pure/subjectarea/asjc/1100/1111", "580", "0301 basic medicine", "570", "0303 health sciences", "Lactuca sativa", "name=Soil Science", "/dk/atira/pure/subjectarea/asjc/1100/1110", "Regular Article", "15. Life on land", "Imaging", "Laser dissection", "03 medical and health sciences", "Root", "name=Plant Science"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s11104-021-05133-2.pdf"}, {"href": "https://doi.org/10.1007/s11104-021-05133-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-021-05133-2", "name": "item", "description": "10.1007/s11104-021-05133-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-021-05133-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-12T00:00:00Z"}}, {"id": "10.1007/s11104-022-05438-w", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:47Z", "type": "Journal Article", "created": "2022-04-22", "title": "The potential of cover crops to increase soil organic carbon storage in German croplands", "description": "Abstract                 Aims                 <p>Soil organic carbon (SOC) stocks of croplands can be enhanced by targeted management, which boosts soil fertility and contributes to climate\uffc2\uffa0change mitigation. One SOC sequestration option is adopting cover crops. The aim of this study was to quantify the SOC sequestration potential of cover crops in Germany.</p>                                Methods                 <p>We simulated SOC scenarios on 1,267 cropland sites with site-specific management data using an SOC model ensemble consisting of RothC and C-TOOL. A new method was developed to estimate carbon input from cover crops that included the effects of climate, sowing date and species on cover crop biomass production.</p>                                Results                 <p>The recent cover crop area could be tripled to 30% of arable land in Germany. This would enhance total carbon input by 12% and increase SOC stocks by 35 Tg within 50 years, corresponding to an annual increase of 0.06 Mg C ha-1, 2.5 Tg CO2 or 0.8 per mill of current SOC stocks in 0\uffe2\uff80\uff9330\uffc2\uffa0cm depth. On sites with cover crops, 0.28\uffe2\uff80\uff930.33 Mg C ha-1 a-1 would be accumulated within 50 years. Our simulations predicted that even if the full potential for cover crop growth were realised, there would still be a decline in SOC stocks in German croplands within 50 years due to the underlining negative SOC trend.</p>                                Conclusions                 <p>Cover crops alone cannot turn croplands from carbon sources to sinks. However, growing them reduces bare fallow periods and SOC losses and thus is an effective climate change mitigation strategy in agriculture.</p>", "keywords": ["2. Zero hunger", "Research Article ; Carbon sequestration ; Modelling ; Carbon input ; Allometric function ; Climate change mitigation ; Environmental Sciences", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "7. Clean energy", "ddc:"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s11104-022-05438-w.pdf"}, {"href": "https://doi.org/10.1007/s11104-022-05438-w"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-022-05438-w", "name": "item", "description": "10.1007/s11104-022-05438-w", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-022-05438-w"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-04-22T00:00:00Z"}}, {"id": "10.1007/s11104-022-05508-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:47Z", "type": "Journal Article", "created": "2022-06-22", "title": "Harnessing belowground processes for sustainable intensification of agricultural systems", "description": "Abstract <p>Increasing food demand coupled with climate change pose a great challenge to agricultural systems. In this review we summarize recent advances in our knowledge of how plants, together with their associated microbiota, shape rhizosphere processes. We address (molecular) mechanisms operating at the plant\uffe2\uff80\uff93microbe-soil interface and aim to link this knowledge with actual and potential avenues for intensifying agricultural systems, while at the same time reducing irrigation water, fertilizer inputs and pesticide use. Combining in-depth knowledge about above and belowground plant traits will not only significantly advance our mechanistic understanding of involved processes but also allow for more informed decisions regarding agricultural practices and plant breeding. Including belowground plant-soil-microbe interactions in our breeding efforts will help to select crops resilient to abiotic and biotic environmental stresses and ultimately enable us to produce sufficient food in a more sustainable agriculture in the upcoming decades.</p", "keywords": ["0301 basic medicine", "BIOLOGICAL NITRIFICATION INHIBITION", "PHOSPHATE SOLUBILIZING BACTERIA", "Plant-plant interaction", "Rhizobiome", "MEDIATED PH CHANGES", "Review Article", "Plant health", "MEMBRANE H+-ATPASE", "12. Responsible consumption", "03 medical and health sciences", "Soil health", "Soil structure", "C sequestration", "SDG 13 - Climate Action", "SDG 2 \u2013 Kein Hunger", "106026 Ecosystem research", "Plant nutrition", "SDG 2 - Zero Hunger", "2. Zero hunger", "0303 health sciences", "Water availability", "Root exudation", "JASMONIC ACID", "15. Life on land", "Microbes", "Intercropping", "106026 \u00d6kosystemforschung", "PLANT-GROWTH", "13. Climate action", "ROOT BORDER CELLS", "SDG 13 \u2013 Ma\u00dfnahmen zum Klimaschutz", "C cycling", "INNATE IMMUNITY", "NITROGEN-FIXATION", "ORGANIC-ACIDS"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s11104-022-05508-z.pdf"}, {"href": "https://doi.org/10.1007/s11104-022-05508-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-022-05508-z", "name": "item", "description": "10.1007/s11104-022-05508-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-022-05508-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-06-22T00:00:00Z"}}, {"id": "10.1007/s11104-024-07049-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:47Z", "type": "Journal Article", "created": "2024-11-07", "title": "Plant-soil feedback responses to drought are species-specific and only marginally predicted by root traits", "description": "Abstract                        Background and aims             <p>The increasing occurrence of extreme drought events under climate change alters the composition and functioning of plant communities worldwide. Drought-induced changes in plant-soil feedback (PSF), reciprocal effects on fitness between plants and their associated soil microbial communities, are one mechanism through which these changes in vegetation occur, but they remain difficult to predict. Because of their direct link to rhizosphere microbial communities, we expect root traits to predict drought-induced PSF shifts.</p>                                   Methods             <p>In the conditioning phase of a greenhouse experiment, we subjected 12 common grassland species to drought. In the feedback phase, all species were grown under ambient conditions with their own microbial inoculum. Their growth was compared to growth in sterile soil to assess total PSF or soil inoculated with microbes from three other species to assess specific PSF. We used root traits to predict PSF under drought and ambient conditions.</p>                                   Results             <p>Drought altered the magnitude and direction of PSF in a quarter of the species, which was consistent between total and specific PSF. Total PSF was best predicted by the first axis of the root trait space (high specific root length to high root diameter and root nitrogen content) and was not responsive to drought. Specific PSF was weakly predicted by root traits and changed in response to drought.</p>                                   Conclusion             <p>Our results show that drought can modify the feedbacks between plants and their microbial communities with implications for vegetation dynamics. Root traits have limited capacity to predict these shifts, but can predict PSF of the total microbial community independent of drought.</p>", "keywords": ["0106 biological sciences", "0301 basic medicine", "03 medical and health sciences", "01 natural sciences", "Research Article"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s11104-024-07049-z.pdf"}, {"href": "https://doi.org/10.1007/s11104-024-07049-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-024-07049-z", "name": "item", "description": "10.1007/s11104-024-07049-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-024-07049-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-11-07T00:00:00Z"}}, {"id": "10.1007/s11242-023-01993-7", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:47Z", "type": "Journal Article", "created": "2023-07-26", "title": "Statistical Effective Diffusivity Estimation in Porous Media Using an Integrated On-site Imaging Workflow for Synchrotron Users", "description": "Abstract<p>Transport in porous media plays an essential role for many physical, engineering, biological and environmental processes. Novel synchrotron imaging techniques and image-based models have enabled more robust quantification of geometric structures that influence transport through the pore space. However, image-based modelling is computationally expensive, and end users often require, while conducting imaging campaign, fast and agile bulk-scale effective parameter estimates that account for the pore-scale details. In this manuscript we enhance a pre-existing image-based model solver known as OpenImpala to estimate bulk-scale effective transport parameters. In particular, the boundary conditions and equations in OpenImpala were modified in order to estimate the effective diffusivity in an imaged system/geometry via a formal multi-scale homogenisation expansion. Estimates of effective pore space diffusivity were generated for a range of elementary volume sizes to estimate when the effective diffusivity values begin to converge to a single value. Results from OpenImpala were validated against a commercial finite element method package COMSOL Multiphysics (abbreviated as COMSOL). Results showed that the effective diffusivity values determined with OpenImpala were similar to those estimated by COMSOL. Tests on larger domains comparing a full image-based model to a homogenised (geometrically uniform) domain that used the effective diffusivity parameters showed differences below 2 % error, thus verifying the accuracy of the effective diffusivity estimates. Finally, we compared OpenImpala\uffe2\uff80\uff99s parallel computing speeds to COMSOL. OpenImpala consistently ran simulations within fractions of minutes, which was two orders of magnitude faster than COMSOL providing identical supercomputing specifications. In conclusion, we demonstrated OpenImpala\uffe2\uff80\uff99s utility as part of an on-site tomography processing pipeline allowing for fast and agile assessment of porous media processes and to guide imaging campaigns while they are happening at synchrotron beamlines.</p", "keywords": ["Article", "004"]}, "links": [{"href": "https://eprints.soton.ac.uk/481345/1/s11242_023_01993_7.pdf"}, {"href": "https://doi.org/10.1007/s11242-023-01993-7"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Transport%20in%20Porous%20Media", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11242-023-01993-7", "name": "item", "description": "10.1007/s11242-023-01993-7", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11242-023-01993-7"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-07-26T00:00:00Z"}}, {"id": "10.1007/s11356-024-34383-7", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:49Z", "type": "Journal Article", "created": "2024-07-17", "title": "Site matters: site-specific factors control phosphorus retention in buffer strip soils under concentrated field runoff", "description": "Abstract<p>Soil erosion from agricultural fields is a persistent ecological problem, potentially leading to eutrophication of aquatic habitats in the catchment area. Often used and recommended mitigation measures are vegetated filter strips (VFS) as buffer zones between arable land and water bodies. However, if they are designed and managed poorly, nutrients \uffe2\uff80\uff94 especially phosphorus (P) \uffe2\uff80\uff94 may accumulate in the soil. Ultimately, VFS can switch from being a nutrient sink to a source. This problem is further aggravated if the field runoff does not occur as uniform sheet flow, but rather in concentrated form, as is usually the case. To assess the impact of concentrated flow on VFS performance, we have taken soil core samples from field-VFS transition zones at six sites in Lower Austria. We determined a multitude of physical and chemical soil parameters, focusing on P fractions and indices. Our results revealed that concentrated flow can lead to an accumulation of P in the VFS. P levels in the VFS inside the area of concentrated runoff can be equal to or higher than in the field, even though they receive no direct fertilization. However, the concentration and distribution of nutrients in the fields and VFSs were also site-specific and affected by local factors such as the age of the VFS, cropping, and fertilization. Accordingly, there is a need for more sophisticated, bespoke VFS designs that can cope with site-specific runoff volumes and movements of nutrients that occur.</p", "keywords": ["Phosphorus sorption index (PSI)", "2. Zero hunger", "Concentrated flow", "Vegetated filter strips", "Phosphorus", "Agriculture", "04 agricultural and veterinary sciences", "15. Life on land", "Flow convergence", "Sediment and nutrient retention", "01 natural sciences", "6. Clean water", "Degree of phosphorus saturation (DPS)", "Soil", "Erosion", "13. Climate action", "Austria", "0401 agriculture", " forestry", " and fisheries", "Research Article", "Environmental Monitoring", "Soil Erosion", "0105 earth and related environmental sciences"], "contacts": [{"organization": "David Ramler, Peter Strauss,", "roles": ["creator"]}]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s11356-024-34383-7.pdf"}, {"href": "https://doi.org/10.1007/s11356-024-34383-7"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20and%20Pollution%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11356-024-34383-7", "name": "item", "description": "10.1007/s11356-024-34383-7", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11356-024-34383-7"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-07-17T00:00:00Z"}}, {"id": "10.1007/s11356-015-4557-9", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:49Z", "type": "Journal Article", "created": "2015-04-26", "title": "Effects Of Winter Covering Crop Residue Incorporation On Ch4 And N2o Emission From Double-Cropped Paddy Fields In Southern China", "description": "Residue management in cropping systems is useful to improve soil quality. However, the studies on the effects of residue management on methane (CH(4)) and nitrous oxide (N(2)O) emission from paddy field in southern China are few. Therefore, the emissions of CH(4) and N(2)O were investigated in double cropping rice (Oryza sativa L.) systems with different winter covering crops using the static chamber-gas chromatography technique to assess the effects of different covering crops on the emissions of greenhouse gases. The experiment was established in 2004 in Hunan Province, China. Three winter cropping systems were used: rice\u2013rice\u2013rape (Brassica napus L.) (T1), rice\u2013rice\u2013potato with straw mulching (Solanum tuberosum L.) (T2), and rice\u2013rice with winter fallow (CK). A randomized block design was adopted in plots, with three replications. The results showed that T2 plots had the largest CH(4) emissions during the early and late rice growing season with 12.506 and 32.991\u00a0g\u00a0m(\u22122), respectively. When compared to CK, total N(2)O emissions in the early rice growth period and the emissions of the gas increased by 0.013\u00a0g\u00a0m(\u22122) in T1 and 0.045\u00a0g\u00a0m(\u22122) in T2, respectively. Similar results were obtained in the late rice growth period; the total N(2)O emissions increased by 0.027\u00a0g\u00a0m(\u22122) in T1 and 0.084\u00a0g\u00a0m(\u22122) in T2, respectively. The mean value of global warming potentials (GWPs) of CH(4) and N(2)O emissions over 100\u00a0years was in the order of T2\u2009>\u2009T1\u2009>\u2009CK, which indicated CK and T1 was significantly lower than T2 (P\u2009<\u20090.05). This suggests that adoption of T1 would be beneficial for greenhouse gas emission mitigation and could be a good option cropping pattern in double rice cropped regions.", "keywords": ["2. Zero hunger", "13. Climate action", "Health", " Toxicology and Mutagenesis", "Environmental Chemistry", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Pollution", "Research Article"], "contacts": [{"organization": "Weiyan Li, Xiaoping Xiao, Guang-Li Yang, Tang Wenguang, Jimin Sun, Ke Wang, Haiming Tang,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s11356-015-4557-9"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20and%20Pollution%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11356-015-4557-9", "name": "item", "description": "10.1007/s11356-015-4557-9", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11356-015-4557-9"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-04-28T00:00:00Z"}}, {"id": "10.1007/s11356-022-22599-4", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:49Z", "type": "Journal Article", "created": "2022-05-13", "title": "Physicochemical and biological ageing processes of (micro)plastics in the environment: a multi-tiered study on polyethylene", "description": "<title>Abstract</title>         <p>Pollution by plastic and microplastic impacts the environment globally. Knowledge on the ageing mechanisms of plastics in natural settings is needed to understand their environmental fate and interaction with biota. The study of physicochemical and biological ageing is gaining focus in the context of the environmental sciences. However experimental research has typically assessed individual ageing processes, isolating them from a more realistic and complex environmental context where multiple factors are simultaneously at play. An over-simplistic approach can limit the comprehension of the phenomenon and prevent ranking the prevalent processes. In this study we propose a multi-tiered approach to study the environmental ageing of polyethylene plastic fragments focusing on the combined assessment of physical and biological processes, in sequence. The ageing protocol included Ultraviolet (UV) irradiation in air and in a range of water solutions, followed by a biofouling test. Changes in surface characteristics were assessed by Fourier transform infrared spectroscopy and scanning electron microscopy. UV irradiation both in air and water caused a significant increase in the density of oxidized groups on plastic surface, whereby water solution chemistry influenced the process both by modulating surface oxidation and morphology. Biofouling too, was a strong determinant of surface alterations, regardless the prior irradiation treatments. This suggests that biological-driven alterations are not affected by the level of chemical-physical ageing and may represent, in real settings, a main driver of alteration of both weathered and pristine plastics. This work highlights the potential pivotal role of biofouling as a main process of plastic ageing, providing useful technical insights for future experimental works. These results also confirms that a multi-tiered experimental approach is necessary for a complete characterization of the environmental ageing of plastics.</p>", "keywords": ["Polyethylene", "13. Climate action", "0211 other engineering and technologies", "Water", "02 engineering and technology", "Plastics", "01 natural sciences", "Ecosystem", "Water Pollutants", " Chemical", "Research Article", "Environmental Monitoring", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s11356-022-22599-4.pdf"}, {"href": "https://doi.org/10.1007/s11356-022-22599-4"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20and%20Pollution%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11356-022-22599-4", "name": "item", "description": "10.1007/s11356-022-22599-4", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11356-022-22599-4"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-13T00:00:00Z"}}, {"id": "10.1007/s11356-024-34957-5", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:49Z", "type": "Journal Article", "created": "2024-09-16", "title": "Beekeeping breakthrough: unveiling hive health with a portable membrane inlet mass spectrometry detection method", "description": "Supporting bee populations is essential considering threats posed by human activities like pesticide usage and habitat destruction. However, the current methods for monitoring and analyzing beehives and their surrounding environments are invasive, complex, and time-consuming. These methods often rely heavily on laboratory analyses, making them difficult to implement independently in the field. This study explores the application of portable membrane inlet mass spectrometer (MIMS) for noninvasive hive analysis, demonstrating its ability to detect various compounds indicative of hive conditions and environmental stressors. In addition to the expected compounds found in beehives, such as \u03b1-bergamotene, hexadecanoic acid, heptadecane, hexadecanamide,\u00a0\u03b1-bisabolol-, 9-octadecenamide, (Z)\u2009\u2212\u2009, and benzaldehyde, unexpected compounds, pollutants, like indane (polycyclic aromatic hydrocarbon) and carbofuran (pesticide), were also detected. The MIMS detection method provides rapid, accurate, and real-time results, making it suitable for preventive measures against bee diseases and integral to environmental biomonitoring. This integration of technology represents a significant advancement in bee conservation efforts, offering hope for the future of both bees and ecosystems.", "keywords": ["Animals", "Bees", "Beekeeping", "Mass Spectrometry", "Research Article", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.1007/s11356-024-34957-5"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20and%20Pollution%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11356-024-34957-5", "name": "item", "description": "10.1007/s11356-024-34957-5", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11356-024-34957-5"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-09-16T00:00:00Z"}}, {"id": "10.1007/s11368-022-03203-1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:51Z", "type": "Journal Article", "created": "2022-04-23", "title": "Improving the design and implementation of sediment fingerprinting studies: summary and outcomes of the TRACING 2021 Scientific School", "description": "Identifying best practices for sediment fingerprinting or tracing is important to allow the quantification of sediment contributions from catchment sources. Although sediment fingerprinting has been applied with reasonable success, the deployment of this method remains associated with many issues and limitations.Seminars and debates were organised during a 4-day Thematic School in October 2021 to come up with concrete suggestions to improve the design and implementation of tracing methods.First, we suggest a better use of geomorphological information to improve study design. Researchers are invited to scrutinise all the knowledge available on the catchment of interest, and to obtain multiple lines of evidence regarding sediment source contributions. Second, we think that scientific knowledge could be improved with local knowledge and we propose a scale of participation describing different levels of involvement of locals in research. Third, we recommend the use of state-of-the-art sediment tracing protocols to conduct sampling, deal with particle size, and examine data before modelling and accounting for the hydro-meteorological context under investigation. Fourth, we promote best practices in modelling, including the importance of running multiple models, selecting appropriate tracers, and reporting on model errors and uncertainty. Fifth, we suggest best practices to share tracing data and samples, which will increase the visibility of the fingerprinting technique in geoscience. Sixth, we suggest that a better formulation of hypotheses could improve our knowledge about erosion and sediment transport processes in a more unified way.With the suggested improvements, sediment fingerprinting, which is interdisciplinary in nature, could play a major role to meet the current and future challenges associated with global change.The online version contains supplementary material available at 10.1007/s11368-022-03203-1.", "keywords": ["[SDE] Environmental Sciences", "DATA", "550", "[SDU.STU.GM] Sciences of the Universe [physics]/Earth Sciences/Geomorphology", "[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study", "01 natural sciences", "333", "source-to-sink", "basin", "local knowledge", "[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/Geochemistry", "[SDU.STU.GC] Sciences of the Universe [physics]/Earth Sciences/Geochemistry", "11. Sustainability", "[SDU.STU.GM]Sciences of the Universe [physics]/Earth Sciences/Geomorphology", "14. Life underwater", "[SDU.STU.HY]Sciences of the Universe [physics]/Earth Sciences/Hydrology", "catchment", "[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil study", "watershed", "FAIR", "0105 earth and related environmental sciences", "sediment tracing", "ddc:550", "Frontiers in Soils and Sediments \u2022 Research Article", "15. Life on land", "[SDU.ENVI] Sciences of the Universe [physics]/Continental interfaces", " environment", "6. Clean water", "sediment fingerprinting", "Chemistry", "critical Zone", "13. Climate action", "Earth and Environmental Sciences", "[SDE]Environmental Sciences", "[SDU.STU.HY] Sciences of the Universe [physics]/Earth Sciences/Hydrology", "[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces", "environment"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s11368-022-03203-1.pdf"}, {"href": "https://doi.org/10.1007/s11368-022-03203-1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Soils%20and%20Sediments", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11368-022-03203-1", "name": "item", "description": "10.1007/s11368-022-03203-1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11368-022-03203-1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-04-23T00:00:00Z"}}, {"id": "10.1007/s11440-019-00781-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:51Z", "type": "Journal Article", "created": "2019-02-11", "title": "Effects of particle sphericity and initial fabric on the shearing behavior of soil\u2013rough structural interface", "description": "In this study, the effects of particle sphericity and initial fabric on the shearing behavior of soil-structural interface were analyzed by discrete element method (DEM). Three types of clustered particles were designed to represent irregular particles featuring various sphericities. The extreme porosities of granular materials composed of various clustered particles were affected by particle sphericity. Moreover, five specimens consisting of differently oriented particles were prepared to study the effect of initial fabric. A series of interface shear tests featuring varying interface roughnesses were carried out using three-dimensional (3D) DEM simulations. The macro-response showed that the shear strength of the interface increased as particle sphericity decreased, while stress softening and dilatancy were easily observed during the shearing. From the particle-scale analysis, it was found that the thickness of the localized band was affected by the interface roughness, the normal stress and the initial fabric while independent of the particle sphericity. The thickness generally ranged between 4 and 6 times that of the median particle equivalent diameter. A thicker localized band was formed in the case of rougher interface and in soil composed of inclined placed and randomly placed particles. The coordination number measured in the interface zone and upper zone suggested that the dilation mostly occurs inside the ud interface zone. Anisotropy was induced by the interface shearing of the initial isotropic specimens. The direction of shearinduced anisotropy correlates with the shearing direction. The evolutions of anisotropies for the anisotropic specimens depend on the initial fabric.", "keywords": ["Interface roughness", "Soil-structural interface", "TA", "0203 mechanical engineering", "0211 other engineering and technologies", "Initial fabric", "02 engineering and technology", "Particle sphericity effect", "Discrete element method"]}, "links": [{"href": "http://wrap.warwick.ac.uk/149220/7/WRAP-Effects-particle-sphericity-initial-fabric-shearing-behavior-soil2-rough-structural-2021.pdf"}, {"href": "http://link.springer.com/content/pdf/10.1007/s11440-019-00781-2.pdf"}, {"href": "https://doi.org/10.1007/s11440-019-00781-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Acta%20Geotechnica", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11440-019-00781-2", "name": "item", "description": "10.1007/s11440-019-00781-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11440-019-00781-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-02-11T00:00:00Z"}}, {"id": "10.1007/s11538-017-0350-x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:52Z", "type": "Journal Article", "created": "2017-10-13", "title": "An Explicit Structural Model of Root Hair and Soil Interactions Parameterised by Synchrotron X-ray Computed Tomography", "description": "The rhizosphere is a zone of fundamental importance for understanding the dynamics of nutrient acquisition by plant roots. The canonical difficulty of experimentally investigating the rhizosphere led long ago to the adoption of mathematical models, the most sophisticated of which now incorporate explicit representations of root hairs and rhizosphere soil. Mathematical upscaling regimes, such as homogenisation, offer the possibility of incorporating into larger-scale models the important mechanistic processes occurring at the rhizosphere scale. However, we lack concrete descriptions of all the features required to fully parameterise models at the rhizosphere scale. By combining synchrotron X-ray computed tomography (SRXCT) and a novel root growth assay, we derive a three-dimensional description of rhizosphere soil structure suitable for use in multi-scale modelling frameworks. We describe an approach to mitigate sub-optimal root hair detection via structural root hair growth modelling. The growth model is explicitly parameterised with SRXCT data and simulates three-dimensional root hair ideotypes in silico, which are suitable for both ideotypic analysis and parameterisation of 3D geometry in mathematical models. The study considers different hypothetical conditions governing root hair interactions with soil matrices, with their respective effects on hair morphology being compared between idealised and image-derived soil/root geometries. The studies in idealised geometries suggest that packing arrangement of soil affects hair tortuosity more than the particle diameter. Results in field-derived soil suggest that hair access to poorly mobile nutrients is particularly sensitive to the physical interaction between the growing hairs and the phase of the soil in which soil water is present (i.e. the hydrated textural phase). The general trends in fluid-coincident hair length with distance from the root, and their dependence on hair/soil interaction mechanisms, are conserved across Cartesian and cylindrical geometries.", "keywords": ["2. Zero hunger", "0301 basic medicine", "0303 health sciences", "Mathematical Concepts", "15. Life on land", "Models", " Biological", "Plant Roots", "Soil", "03 medical and health sciences", "Imaging", " Three-Dimensional", "Rhizosphere", "Original Article", "Computer Simulation", "Tomography", " X-Ray Computed", "Synchrotrons"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s11538-017-0350-x.pdf"}, {"href": "https://doi.org/10.1007/s11538-017-0350-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bulletin%20of%20Mathematical%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11538-017-0350-x", "name": "item", "description": "10.1007/s11538-017-0350-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11538-017-0350-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-10-13T00:00:00Z"}}, {"id": "10.1007/s11538-019-00656-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:52Z", "type": "Journal Article", "created": "2019-08-22", "title": "Multiple Scale Homogenisation of Nutrient Movement and Crop Growth in Partially Saturated Soil", "description": "In this paper, we use multiple scale homogenisation to derive a set of averaged macroscale equations that describe the movement of nutrients in partially saturated soil that contains growing potato tubers. The soil is modelled as a poroelastic material, which is deformed by the growth of the tubers, where the growth of each tuber is dependent on the uptake of nutrients via a sink term within the soil representing root nutrient uptake. Special attention is paid to the reduction in void space, resulting change in local water content and the impact on nutrient diffusion within the soil as the tubers increase in size. To validate the multiple scale homogenisation procedure, we compare the system of homogenised equations to the original set of equations and find that the solutions between the two models differ by [Formula: see text]. However, we find that the computation time between the two sets of equations differs by several orders of magnitude. This is due to the combined effects of the complex three-dimensional geometry and the implementation of a moving boundary condition to capture tuber growth.", "keywords": ["Crops", " Agricultural", "2. Zero hunger", "0301 basic medicine", "570", "Water", "Mathematical Concepts", "Nutrients", "04 agricultural and veterinary sciences", "15. Life on land", "Models", " Biological", "Elasticity", "510", "Diffusion", "Plant Tubers", "Soil", "03 medical and health sciences", "0401 agriculture", " forestry", " and fisheries", "Original Article", "Porosity", "Solanum tuberosum"]}, "links": [{"href": "https://eprints.soton.ac.uk/433288/1/Simon_3.pdf"}, {"href": "http://link.springer.com/content/pdf/10.1007/s11538-019-00656-3.pdf"}, {"href": "https://doi.org/10.1007/s11538-019-00656-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bulletin%20of%20Mathematical%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11538-019-00656-3", "name": "item", "description": "10.1007/s11538-019-00656-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11538-019-00656-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-08-22T00:00:00Z"}}, {"id": "10.1007/s13213-014-0889-9", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:54Z", "type": "Journal Article", "created": "2014-04-21", "title": "Influence Of Long-Term Fertilization On Soil Microbial Biomass, Dehydrogenase Activity, And Bacterial And Fungal Community Structure In A Brown Soil Of Northeast China", "description": "In this study, the effect of mineral fertilizer and organic manure were evaluated on soil microbial biomass, dehydrogenase activity, bacterial and fungal community structure in a long-term (33\u00a0years) field experiment. Except for the mineral nitrogen fertilizer (N) treatment, long-term fertilization greatly increased soil microbial biomass carbon (SMBC) and dehydrogenase activity. Organic manure had a significantly greater impact on SMBC and dehydrogenase activity, compared with mineral fertilizers. Bacterial and fungal community structure was analyzed by polymerase chain reaction (PCR)-denaturing gradient gel electrophoresis (DGGE). Long-term fertilization increased bacterial and fungal ribotype diversity. Total soil nitrogen (TN) and phosphorus (TP), soil organic carbon (SOC) and available phosphorus (AP) had a similar level of influence on bacterial ribotypes while TN, SOC and AP had a larger influence than alkali-hydrolyzable nitrogen (AHN) on fungal ribotypes. Our results suggested that long-term P-deficiency fertilization can significantly decrease soil microbial biomass, dehydrogenase activity and bacterial diversity. N-fertilizer and SOC have an important influence on bacterial and fungal communities.", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Original Article", "04 agricultural and veterinary sciences", "15. Life on land", "Applied Microbiology and Biotechnology", "3. Good health"], "contacts": [{"organization": "Hongzhi Bai, Mei Han, Xiaori Han, Yan Wang, Hui Shi, Liu Ning, Luo Peiyu,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s13213-014-0889-9"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Annals%20of%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s13213-014-0889-9", "name": "item", "description": "10.1007/s13213-014-0889-9", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s13213-014-0889-9"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-04-22T00:00:00Z"}}, {"id": "10.1007/s13280-015-0751-8", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:14:54Z", "type": "Journal Article", "created": "2016-01-07", "title": "The role of biogeochemical hotspots, landscape heterogeneity, and hydrological connectivity for minimizing forestry effects on water quality", "description": "Protecting water quality in forested regions is increasingly important as pressures from land-use, long-range transport of air pollutants, and climate change intensify. Maintaining forest industry without jeopardizing sustainability of surface water quality therefore requires new tools and approaches. Here, we show how forest management can be optimized by incorporating landscape sensitivity and hydrological connectivity into a framework that promotes the protection of water quality. We discuss how this approach can be operationalized into a hydromapping tool to support forestry operations that minimize water quality impacts. We specifically focus on how hydromapping can be used to support three fundamental aspects of land management planning including how to (i) locate areas where different forestry practices can be conducted with minimal water quality impact; (ii) guide the off-road driving of forestry machines to minimize soil damage; and (iii) optimize the design of riparian buffer zones. While this work has a boreal perspective, these concepts and approaches have broad-scale applicability.", "keywords": ["0106 biological sciences", "Conservation of Natural Resources", "Skogsvetenskap", "Geography", " Planning and Development", "01 natural sciences", "Article", "Minimizing forestry effects", "Water Quality", "Environmental Chemistry", "Biomass", "14. Life underwater", "Groundwater", "0105 earth and related environmental sciences", "Ekologi", "Sweden", "Ecology", "Forest Science", "Landscape heterogeneity", "Forestry", "15. Life on land", "Milj\u00f6vetenskap", "Hydrological connectivity", "6. Clean water", "Biogeochemical hotspots", "Environmental Policy", "Water quality", "13. Climate action", "Environmental Sciences", "Environmental Monitoring"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s13280-015-0751-8"}, {"href": "https://doi.org/10.1007/s13280-015-0751-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ambio", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s13280-015-0751-8", "name": "item", "description": "10.1007/s13280-015-0751-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s13280-015-0751-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-01-07T00:00:00Z"}}, {"id": "10.1016/j.foreco.2007.10.027", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:35Z", "type": "Journal Article", "created": "2007-12-06", "title": "Pairwise Comparison Of Soil Organic Particle-Size Distributions In Native Savannas And Eucalyptus Plantations In Congo", "description": "Abstract   Conversion of native vegetation into fast-growing tree plantations is known to affect soil organic matter (SOM): soil carbon (C) and nitrogen (N) content and their distribution in particle-size fractions can be modified in various ways depending on numerous factors, such as soil properties, SOM levels prior to conversion, climatic conditions, silvicultural practices and fire occurrence. Since 1978, 43,000\u00a0ha of clonal eucalyptus plantations have been established on sandy coastal plains under savannas near Pointe-Noire, Congo. We investigated the effects of afforestation on topsoil (0\u201310\u00a0cm) C and N through the analysis of their distribution in particle-size fractions using a pairwise experimental design that compared adjacent savannas and plantations. The studied plantations were of different ages (2\u201330-year-old stands) and differently affected by accidental fires. No significant difference in total topsoil C, N or C/N was observed between young plantations and savanna. In old plantations that had not been affected by fire, total topsoil C content was twice as high as in savanna (   p  =  0.0016   ), on average, mostly involving fractions    >   50\u00a0    \u03bc    m. By contrast, total topsoil N did not differ significantly at these sites. In old plantations affected by fire, total topsoil C content did not differ significantly from that in savanna, but total topsoil N was 26    %    lower in plantations than in savanna (   p  =  0.0063   ), on average, and the decrease affected fractions       200\u00a0    \u03bc    m especially. Whatever the fire occurrence, total topsoil C/N was higher in old plantations than in savanna, in fractions    >   20\u00a0    \u03bc    m especially.", "keywords": ["[SDV.SA.SF]Life Sciences [q-bio]/Agricultural sciences/Silviculture", "http://aims.fao.org/aos/agrovoc/c_7190", "SAVANNA", "SOIL ORGANIC MATTER", "FIRE", "analyse de sol", "FLUX ET STOCKS C", "http://aims.fao.org/aos/agrovoc/c_35657", "azote", "2. Zero hunger", "Eucalyptus", "FRACTIONATION", "fraction du sol", "forestry", "FIRE", "04 agricultural and veterinary sciences", "eucalyptus", "META ANALYSIS", "TURNOVER", "[SDV.SA.SF] Life Sciences [q-bio]/Agricultural sciences/Silviculture", " forestry", "plantations", "particle size fractionation", "http://aims.fao.org/aos/agrovoc/c_5990", "fire", "mati\u00e8re organique du sol", "http://aims.fao.org/aos/agrovoc/c_2683", "P33 - Chimie et physique du sol", "570", "PARTICLE-SIZE FRACTIONATION", "http://aims.fao.org/aos/agrovoc/c_24420", "MATTER DYNAMICS", "http://aims.fao.org/aos/agrovoc/c_5192", "TROPICAL SOILS", "LITTER DECOMPOSITION", "soil organic matter", "MANAGEMENT", "EUCALYPTUS", "savane", "http://aims.fao.org/aos/agrovoc/c_1301", "PINUS", "CHANGEMENT D'USAGE DES TERRES", "CARBON DYNAMICS", "http://aims.fao.org/aos/agrovoc/c_1811", "15. Life on land", "savanna", "K10 - Production foresti\u00e8re", "AFFORESTATION", "http://aims.fao.org/aos/agrovoc/c_6825", "0401 agriculture", " forestry", " and fisheries", "carbone", "impact sur l'environnement", "http://aims.fao.org/aos/agrovoc/c_7198"]}, "links": [{"href": "https://doi.org/10.1016/j.foreco.2007.10.027"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Forest%20Ecology%20and%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.foreco.2007.10.027", "name": "item", "description": "10.1016/j.foreco.2007.10.027", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.foreco.2007.10.027"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-03-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2017.08.028", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:04Z", "type": "Journal Article", "created": "2017-09-21", "title": "N 2 -Fixation And N Contribution By Grain Legumes Under Different Soil Fertility Status And Cropping Systems In The Guinea Savanna Of Northern Ghana", "description": "Continuous cereal-based cropping has led to a rapid decline in soil fertility in the Guinea savanna agro-ecological zone of northern Ghana with corresponding low crop yields. We evaluated the effects of cropping system and soil fertility status on grain yields and N2-fixation by grain legumes and net N contribution to soil fertility improvement in contrasting sites in this agro-ecological zone. Maize was intercropped with cowpea, soybean and groundnut within a row, with a maize stand alternated with two equally spaced cowpea or groundnut stands and in the maize-soybean system, four equally spaced soybean stands. These intercrops were compared with sole crops of maize, cowpea, soybean and groundnut in fertile and poorly fertile fields at sites in the southern (SGS) and the northern (NGS) Guinea savanna. The proportion of N derived from N2-fixation (%Ndfa) was comparable between intercrops and sole crops. However, the amount of N2-fixed was significantly larger in sole crops due to a greater biomass accumulation. Legumes in poorly fertile fields had significantly smaller shoot \u03b415N enrichment (-2.8 to +0.7\u2030) and a larger %Ndfa (55-94%) than those in fertile fields (-0.8 to +2.2\u2030; 23-85%). The N2-fixed however was larger in fertile fields (16-145\u00a0kg\u00a0N\u00a0ha-1) than in poorly fertile fields (15-123\u00a0kg\u00a0N\u00a0ha-1) due to greater shoot dry matter and N yields. The legumes grown in the NGS obtained more of their N requirements from atmospheric N2-fixation (73-88%) than legumes grown in the SGS (41-69%). The partial soil N balance (in\u00a0kg\u00a0ha-1) was comparable between intercrops (-14 to 21) and sole legumes (-8 to 23) but smaller than that of sole maize receiving N fertiliser (+7 to +34). With other N inputs (aerial deposition) and outputs (leaching and gaseous losses) unaccounted for, there is uncertainty surrounding the actual amount of soil N balances of the cropping systems, indicating that partial N balances are not reliable indicators of the sustainability of cropping systems. Nevertheless, the systems with legumes seem more attractive due to several non-N benefits. Our results suggest that soybean could be targeted in the SGS and cowpea in the NGS for greater productivity while groundnut is suited to both environments. Grain legumes grown in poorly fertile fields contributed more net N to the soil but growing legumes in fertile fields seems more lucrative due to greater grain and stover yields and non-N benefits.", "keywords": ["0106 biological sciences", "2. Zero hunger", "Groundnut", "Cowpea", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Soybean", "01 natural sciences", "Article", "Maize", "Partial N balance"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2017.08.028"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2017.08.028", "name": "item", "description": "10.1016/j.agee.2017.08.028", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2017.08.028"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-07-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2017.10.023", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:04Z", "type": "Journal Article", "created": "2017-11-07", "title": "Critical review of the impacts of grazing intensity on soil organic carbon storage and other soil quality indicators in extensively managed grasslands", "description": "Livestock grazing intensity (GI) is thought to have a major impact on soil organic carbon (SOC) storage and soil quality indicators in grassland agroecosystems. To critically investigate this, we conducted a global review and meta-analysis of 83 studies of extensive grazing, covering 164 sites across different countries and climatic zones. Unlike previous published reviews we normalized the SOC and total nitrogen (TN) data to a 30\u00a0cm depth to be compatible with IPCC guidelines. We also calculated a normalized GI and divided the data into four main groups depending on the regional climate (dry warm, DW; dry cool, DC; moist warm, MW; moist cool, MC). Our results show that taken across all climatic zones and GIs, grazing (below the carrying capacity of the systems) results in a decrease in SOC storage, although its impact on SOC is climate-dependent. When assessed for different regional climates, all GI levels increased SOC stocks under the MW climate (+7.6%) whilst there were reductions under the MC climate (-19%). Under the DW and DC climates, only the low (+5.8%) and low to medium (+16.1%) grazing intensities, respectively, were associated with increased SOC stocks. High GI significantly increased SOC for C4-dominated grassland compared to C3-dominated grassland and C3-C4 mixed grasslands. It was also associated with significant increases in TN and bulk density but had no effect on soil pH. To protect grassland soils from degradation, we recommend that GI and management practices should be optimized according to climate region and grassland type (C3, C4 or C3-C4 mixed).", "keywords": ["330", "QH301 Biology", "630", "Article", "QH301", "NE/M021327/1", "Grazing intensity", "SDG 13 - Climate Action", "grazing", "2. Zero hunger", "Soil organic carbon", "Natural Environment Research Council (NERC)", "NE/P019455/1", "04 agricultural and veterinary sciences", "15. Life on land", "Grassland", "soil organic carbon", "Grazing", "grazing intensity", "total nitrogen", "13. Climate action", "NE/M016900/1", "NE/M019713/1", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "BB/N013484/1", "grassland", "BB/N013468/1"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2017.10.023"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2017.10.023", "name": "item", "description": "10.1016/j.agee.2017.10.023", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2017.10.023"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-02-01T00:00:00Z"}}, {"id": "10.1016/j.agrformet.2022.109034", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:06Z", "type": "Journal Article", "created": "2022-06-03", "title": "Real-time automatic detection of starch particles in ambient air", "description": "Considerable amounts of starch granules can be present in the atmosphere from both natural and anthropogenic sources. The aim of this study is to investigate the variability and potential origin of starch granules in ambient air recorded at six cities situated in a region with dominantly agricultural land use. This is achieved by using a combination of laser spectroscopy bioaerosol measurements with 1\u00a0min temporal resolution, traditional volumetric Hirst type bioaerosol sampling and atmospheric modelling. The analysis of wind roses identified potential sources of airborne starch (i.e., cereal grain storage facilities) in the vicinity of all aerobiological stations analysed in this study. The analysis of the CALPUFF dispersion model confirmed that emission of dust from the location of storage towers situated about 2.5 km north of the aerobiological station in Novi Sad is a plausible source of high airborne concentrations of starch granules. This study is important for environmental health since it contributes body of knowledge about sources, emission, and dispersion of airborne starch, known to be involved in phenomena such as thunderstorm-triggered asthma. The presented approach integrates monitoring and modelling, and provides a roadmap for examining a variety of bioaerosols previously considered to be outside the scope of traditional aerobiological measurements.", "keywords": ["2. Zero hunger", "0301 basic medicine", "03 medical and health sciences", "13. Climate action", "Airborne starch", "Aerobiology", "Automatic monitoring", "15. Life on land", "01 natural sciences", "Dispersion modelling", "Article", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://eprints.worc.ac.uk/12417/1/1-s2.0-S0168192322002234-main%20%281%29.pdf"}, {"href": "https://doi.org/10.1016/j.agrformet.2022.109034"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Forest%20Meteorology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agrformet.2022.109034", "name": "item", "description": "10.1016/j.agrformet.2022.109034", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agrformet.2022.109034"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-08-01T00:00:00Z"}}, {"id": "10.1016/j.jare.2020.02.015", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:46Z", "type": "Journal Article", "created": "2020-02-26", "title": "From winery waste to bioactive compounds and new polymeric biocomposites: A contribution to the circular economy concept", "description": "The paper aims at optimising and validating possible routes toward the full valorisation of grape agrowaste to produce bioactive molecules and new materials. Starting from Merlot red pomace, phenol complex mixtures were successfully extracted by using two different approaches. Extracts obtained by solvent-based (SE) technique contained up to 46.9 gGAeq/kgDW of total phenols. Depending on the used solvent, the prevalence of compounds belonging to different phenol families was achieved. Pressurized liquid extraction (PLE) gave higher total phenol yields (up to 79 gGAeq/kgDW) but a lower range of extracted compounds. All liquid extracts exerted strong antioxidant properties. Moreover, both SE and PLE extraction solid residues were directly exploited (between 5 and 20% w/w) to prepare biocomposite materials by direct mixing via an eco-friendly approach with PHBV polymer. The final composites showed mechanical characteristics similar to PHVB matrix. The use of pomace residues in biocomposites could therefore bring both to the reduction of the cost of the final material, as a lower amount of costly PHBV is used. The present research demonstrated the full valorisation of grape pomace, an agrowaste produced every year in large amounts and having a significant environmental impact.", "keywords": ["Medicine (General)", "Biocomposites", "Science (General)", "Agricultural Sciences", "Polyphenols", "Solvent-based extraction", "Biowaste", "04 agricultural and veterinary sciences", "Agriculture Forestry and Fisheries", "Grape pomace", "Biocomposites; Biowaste; Grape pomace; Polyphenols; Solvent-based extraction", " Pressurized liquid extraction", "01 natural sciences", "Article", "12. Responsible consumption", "Q1-390", "R5-920", "0404 agricultural biotechnology", "Pressurized liquid extraction", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://cris.unibo.it/bitstream/11585/758289/1/Ferri%20et%20al%202020%20JARE%20.pdf"}, {"href": "https://doi.org/10.1016/j.jare.2020.02.015"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Advanced%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jare.2020.02.015", "name": "item", "description": "10.1016/j.jare.2020.02.015", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jare.2020.02.015"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-07-01T00:00:00Z"}}, {"id": "10.1016/j.agrformet.2020.108031", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:06Z", "type": "Journal Article", "created": "2020-05-29", "title": "Inter-individual variability in spring phenology of temperate deciduous trees depends on species, tree size and previous year autumn phenology", "description": "We explored the inter-individual variability in bud-burst and its potential drivers, in homogeneous mature stands of temperate deciduous trees. Phenological observations of leaves and wood formation were performed weekly from summer 2017 to summer 2018 for pedunculate oak, European beech and silver birch in Belgium. The variability of bud-burst was correlated to previous' year autumn phenology (i.e. the onset of leaf senescence and the cessation of wood formation) and tree size but with important differences among species. In fact, variability of bud-burst was primarily related to onset of leaf senescence, cessation of wood formation and tree height for oak, beech and birch, respectively. The inter-individual variability of onset of leaf senescence was not related to the tree characteristics considered and was much larger than the inter-individual variability in bud-burst. Multi-species multivariate models could explain up to 66% of the bud-burst variability. These findings represent an important advance in our fundamental understanding and modelling of phenology and tree functioning of deciduous tree species.", "keywords": ["Agriculture and Food Sciences", "0106 biological sciences", "Atmospheric Science", "polno olistanje", "Broadleaved forest", "Silver birch", "Edellauvskog", "coloration", "01 natural sciences", "fenologija", "navadna bukev", "Pedunculate oak", "FAGUS-SYLVATICA", "PHLOEM", "Global and Planetary Change", "LEAF PHENOLOGY", "CLIMATE-CHANGE", "VDP::\u00d8kologi: 488", "Physics", "Forestry", "VDP::Ecology: 488", "04 agricultural and veterinary sciences", "dob", "navadna breza", "Chemistry", "Phenology", "info:eu-repo/classification/udc/630*811", "rumenenje listov", "XYLEM", "MODELS", "Article", "leaf unfolding", "Fenologi", "Coloration", "nastanek lesa", "Biology", "Wood formation", "kambij", "Leaf unfolding", "RADIAL GROWTH", "15. Life on land", "listavci", "European beech", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "SENESCENCE", "13. Climate action", "wood formation", "0401 agriculture", " forestry", " and fisheries", "[SDE.BE]Environmental Sciences/Biodiversity and Ecology", "Agronomy and Crop Science"]}, "links": [{"href": "https://doi.org/10.1016/j.agrformet.2020.108031"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Forest%20Meteorology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agrformet.2020.108031", "name": "item", "description": "10.1016/j.agrformet.2020.108031", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agrformet.2020.108031"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-08-01T00:00:00Z"}}, {"id": "10.1016/j.agwat.2018.02.001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:08Z", "type": "Journal Article", "created": "2018-03-18", "title": "Impacts of plastic film mulching on crop yields, soil water, nitrate, and organic carbon in Northwestern China: A meta-analysis", "description": "In order to increase crop yield in semi-arid and arid areas, plastic film mulching (PFM) is widely used in Northwestern China. To date, many studies have addressed the effects of PFM on soil physical and biochemical properties in rain-fed agriculture in Northwestern China, but the findings of different studies are often contradictory. Therefore, a comprehensive review of the impacts of PFM on soil water content, soil nutrients and food production is needed. We compiled the results of 1278 observations to evaluate the overall effects of PFM on soil water content, the distribution of nitrate and soil organic carbon, and crop yield in rain-fed agriculture in Northwestern China. Our results showed that PFM increased soil moisture and nitrate concentration in topsoils (0-20\u202fcm) by 12.9% and 28.2%, respectively, but slightly decreased (1.8%) soil organic carbon (SOC) content in the 0-10\u202fcm soil layer. PFM significantly increased grain yields by 43.1%, with greatest effect in spring maize (79.4%). When related to cumulative precipitation during the crop growing season, yield increase from PFM was greatest (72.8%) at 200-300\u202fmm, which was attributed to the large increase for spring maize and potato, implying that crop zoning would be beneficial for PFM in this region. When related to N application rate, crop yields benefited most from PFM (80.2%) at 200-300\u202fkg/ha. A cost-benefit analysis indicated that PFM increased economic return by an average of 29.5%, with the best improvement for spring maize (71.1%) and no increase for spring wheat. In conclusion, PFM can significantly increase crop yield and economic return (especially for spring maize) in rain-fed agriculture areas of Northwestern China. Crop zoning is recommended for PFM to achieve the largest economic benefit. However, full account needs to be taken of the environmental impacts relating to N loss, SOC depletion and film pollution to evaluate the sustainability of PFM systems and further research is required to quantify and mitigate these impacts.", "keywords": ["2. Zero hunger", "0106 biological sciences", "13. Climate action", "Plastic film mulching; Economic benefit; Grain yield; Soil water content; Nitrate", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "Article", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.agwat.2018.02.001"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20Water%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agwat.2018.02.001", "name": "item", "description": "10.1016/j.agwat.2018.02.001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agwat.2018.02.001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-04-01T00:00:00Z"}}, {"id": "10.12688/openreseurope.15821.1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:17:59Z", "type": "Journal Article", "created": "2023-08-14", "title": "Application of halotolerant Azotobacter chroococcum W4ii isolated from technosoils to mitigate salt stress in wheat plant", "description": "<ns4:p>Background: Technosoils in Inowroc\u0142aw, central Poland, are impacted by human activities and exhibit high salinity (ECe up to 70 dS/m) due to a soda lime repository. These saline environments pose challenges to plant growth and soil health. However, they also offer an opportunity for the evolution of microorganisms adapted to such conditions, including plant growth-promoting rhizospheric (PGPR) bacteria. The hypothesis tested here was that introducing PGPR bacteria from these environments could boost degraded soil performance, leading to better plant biomass and improved pathogen defense.</ns4:p>                   <ns4:p>                     Methods:                     <ns4:italic>Azotobacter chroococcum</ns4:italic>                     W4ii was isolated from the rhizosphere of wheat (                     <ns4:italic>Triticum aestivum</ns4:italic>                     L.) for its plant growth properties on wheat plants under salt stress.                   </ns4:p>                   <ns4:p>                     Results: Wheat seeds co-inoculated with                     <ns4:italic>A. chroococcum</ns4:italic>                     W4ii under 200 mM salt stress showed significant improvement in various growth parameters such as seeds germination (by 130%), shoot biomass (15%), chlorophyll b content (40%) compared to un-inoculated ones. Bacterial inoculation decreased the level of malondialdehyde (MDA), whereas it elevated the antioxidative enzymatic activities of peroxidase (POD). The test isolate also enhanced the level of defense enzymes like \u03b2-1, 3-glucanase, which can protect plants from infection by pathogens. The bacterium could also successfully colonize the wheat plants.                   </ns4:p>                   <ns4:p>                     Conclusions: These results indicate that                     <ns4:italic>A. chroococcum</ns4:italic>                     isolated from the technosoils has the potential to promote wheat growth under salt stress and can be further used as a bioinoculant in the salt affected agricultural fields.                   </ns4:p>", "keywords": ["2. Zero hunger", "PGPR", "Salt stress", "Technosoil", "Articles", "15. Life on land", "6. Clean water", "Triticum aestivum L.", "PGPR;Azotobacter chroococcum;Salt stress;Technosoil;Triticum aestivum L.", "Research Article", "Azotobacter chroococcum"], "contacts": [{"organization": "Binod Kumar, Sweta, Kalwasi\u0144ska, Agnieszka, Swiontek Brzezinska, Maria, Wr\u00f3bel, Monika,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.12688/openreseurope.15821.1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Open%20Research%20Europe", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.12688/openreseurope.15821.1", "name": "item", "description": "10.12688/openreseurope.15821.1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.12688/openreseurope.15821.1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-05-12T00:00:00Z"}}, {"id": "10.1016/j.chemosphere.2019.03.190", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:20Z", "type": "Journal Article", "created": "2019-04-01", "title": "Dissolution and aggregation kinetics of zero valent copper nanoparticles in (simulated) natural surface waters: Simultaneous effects of pH, NOM and ionic strength", "description": "The combined effects of pH, dissolved organic carbon (DOC) and Ca2+/Mg2+ on the dissolution and aggregation kinetics of zero valent copper engineered nanoparticles (Cu0 ENPs) were investigated. The dissolution and aggregation of the particles were studied in (a) synthetic aqueous media, similar in chemistry to natural surface waters, and (b) natural surface waters samples, for up to 32 or 24\u202fh. The DOC stabilized the particles and prevented aggregation, and thus increased the available surface area. The higher available surface area in turn accelerated the dissolution of the particles. The presence of Ca2+/Mg2+, however, changed the aggregation and the dissolution of the DOC-stabilized particles. The influence of Ca2+/Mg2+ on DOC-stabilized particles was different at different pH's. In the absence of DOC, 10\u202fmM of Ca2+/Mg2+ induced charge reversal on the particles and caused particle stability against aggregation. This subsequently increased particles dissolution. The results obtained with regard to dissolution and aggregation of the particles in natural surface waters were compared with those determined for the synthetic waters. This comparison showed that the behavior of the particles in the natural surface waters was mostly similar to the behavior determined for media at pH 9. Overall, the current study provides some novel insights into the simultaneous effects of physicochemical parameters of water on particle stability against aggregation and dissolution, and provides data about how the processes of aggregation and dissolution of Cu0 ENPs interact and jointly determine the overall particle fate.", "keywords": ["Cations", " Divalent", "Environmental fate", "Osmolar Concentration", "0211 other engineering and technologies", "Metal Nanoparticles", "Fresh Water", "02 engineering and technology", "Hydrogen-Ion Concentration", "01 natural sciences", "Physico-chemical parameters", "6. Clean water", "Aggregation", "Kinetics", "Solubility", "Aggregation; Complexation; Copper nanoparticles; Dissolution; Environmental fate; Natural water; Physico-chemical parameters", "Complexation", "Natural water", "Calcium", "Magnesium", "Copper nanoparticles", "Organic Chemicals", "Dissolution", "Copper", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.chemosphere.2019.03.190"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Chemosphere", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.chemosphere.2019.03.190", "name": "item", "description": "10.1016/j.chemosphere.2019.03.190", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.chemosphere.2019.03.190"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-07-01T00:00:00Z"}}, {"id": "10.1016/j.jenvman.2019.03.059", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:49Z", "type": "Journal Article", "created": "2019-04-19", "title": "The value of manure - Manure as co-product in life cycle assessment", "description": "Livestock production is important for food security, nutrition, and landscape maintenance, but it is associated with several environmental impacts. To assess the risk and benefits arising from livestock production, transparent and robust indicators are required, such as those offered by life cycle assessment. A central question in such approaches is how environmental burden is allocated to livestock products and to manure that is re-used for agricultural production. To incentivize sustainable use of manure, it should be considered as a co-product as long as it is not disposed of, or wasted, or applied in excess of crop nutrient needs, in which case it should be treated as a waste. This paper proposes a theoretical approach to define nutrient requirements based on nutrient response curves to economic and physical optima and a pragmatic approach based on crop nutrient yield adjusted for nutrient losses to atmosphere and water. Allocation of environmental burden to manure and other livestock products is then based on the nutrient value from manure for crop production using the price of fertilizer nutrients. We illustrate and discuss the proposed method with two case studies.", "keywords": ["[SDV]Life Sciences [q-bio]", "assessment", "resource", "01 natural sciences", "630", "nitrogen", "Fertilizer", "allocation", "life cycle", "manures", "Feeds and feeding. Animal nutrition", "farmyard manure", "Housing and environmental control", "2. Zero hunger", "ta412", "Agriculture and the environment", "Agriculture", "04 agricultural and veterinary sciences", "fertilizer", "Crop Production", "[SDV] Life Sciences [q-bio]", "Livestock supply chains", "green manures", "Fertilisers", "performance", "energy", "Livestock", "330", "fertilizers", "Allocation", "ta1172", "Environmental Sciences & Ecology", "333", "Article", "soil", "12. Responsible consumption", "nutrient use", "Life cycle assessment", "life cycle assessment", "livestock supply chains", "nutrients", "Animals", "livestock production", "alocation", "Fertilizers", "Rangelands. Range management. Grazing", "0105 earth and related environmental sciences", "carbon", "use efficiency", "food security", "Nutrients", "15. Life on land", "livestock", "Manure", "13. Climate action", "manure", "0401 agriculture", " forestry", " and fisheries", "protein"]}, "links": [{"href": "https://doi.org/10.1016/j.jenvman.2019.03.059"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Environmental%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jenvman.2019.03.059", "name": "item", "description": "10.1016/j.jenvman.2019.03.059", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jenvman.2019.03.059"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-07-01T00:00:00Z"}}, {"id": "10.1016/j.biortech.2020.124095", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:16Z", "type": "Journal Article", "created": "2020-09-07", "title": "Biosynthesized iron sulfide nanoparticles by mixed consortia for enhanced extracellular electron transfer in a microbial fuel cell", "description": "The bioanode of mixed consortia was for the first time used to in-situ synthesize iron sulfide nanoparticles in a microbial fuel cell (MFC) over a long-term period (46\u00a0days). These poorly crystalline nanoparticles with an average size of 29.97\u00a0\u00b1\u00a07.1\u00a0nm, comprising of FeS and FeS2, significantly promoted extracellular electron transfer and thus the electricity generation of the MFC. A maximum power density of 519.00\u00a0mW/m2 was obtained from the MFC, which was 1.92 times as high as that of the control. The cell viability was promoted by a small amount of iron sulfide nanoparticles but inhibited by the thick nanoparticle 'shell' covered on the bacterial cells. Some electroactive and sulfur reducing bacteria (eg. Enterobacteriaceae, Desulfovibrio, and Geobacter) were specifically enriched on the anode. This study provides a novel insight for improving the performance of bioelectrochemical systems through in-situ sustainable nanomaterials biofabrication by mixed consortia.", "keywords": ["Electron Transport", "Electricity", "Bioelectric Energy Sources", "Nanoparticles", "Electrons", "Ferrous Compounds", "Electrodes", "7. Clean energy", "01 natural sciences", "0105 earth and related environmental sciences"], "contacts": [{"organization": "Cui, Yan, Chen, Xueru, Pan, Zhengyong, Wang, Yuqi, Xu, Qiang, Bai, Jiaying, Jia, Honghua, Zhou, Jun, Yong, Xiaoyu, Wu, Xiayuan,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.biortech.2020.124095"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bioresource%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.biortech.2020.124095", "name": "item", "description": "10.1016/j.biortech.2020.124095", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.biortech.2020.124095"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-12-01T00:00:00Z"}}, {"id": "10.1016/j.combustflame.2019.11.001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:20Z", "type": "Journal Article", "created": "2020-01-24", "title": "Influence of soil conditions on the multidimensional spread of smouldering combustion in shallow layers", "description": "Abstract   Smouldering peatland fires are capable of burning vast amounts of organic soils, resulting in the release of greenhouse gases into the atmosphere, as well as a significant deterioration of air quality causing in major regional crises known as haze events. Fundamental understanding of smouldering fire spread is essential for the development of mitigating technologies. In this paper, we have systematically conducted 63 experiments studying the individual and combined influence of two key factors affecting multidimensional smouldering spread in organic soils: moisture content (MC) and inorganic content (IC). Both lateral and in-depth smouldering spread were investigated using a novel shallow reactor. This shallow depth allows a greater number of experiments to be performed in a short period of time compared to deeper samples. Lateral spread was found to decrease linearly with moisture content (R2 > 90%); while in-depth spread rate increased linearly up to 300% from moisture content of 0% to 140%. Increased inorganic content linearly decreased the lateral spread rate but had little influence on in-depth spread in drier samples. Interestingly, in wetter samples, in-depth spread was in fact sensitive to inorganic content. A novel approach combining lateral and in-depth spread rates as vector components, revealed that the global spread is independent of moisture content, with an average spread rate of 8.7 and 8.4\u00a0cm/h for 2.5 and 40% IC, with changes in direction according to moisture content; going in-depth for wet soils, and laterally for dry soils. Similarly, increasing the IC encouraged downward spread for wet samples. We also report observations of a bifurcation of lateral spread, where spread would locally extinguish where the in-depth spread was greater than the lateral spread. These findings provide previously unknown insight into the relationship between lateral and in-depth spread in smouldering fires, ultimately improving the fundamental understanding of such fires.", "keywords": ["Technology", "Engineering", " Chemical", "Energy & Fuels", "0904 Chemical Engineering", "Engineering", " Multidisciplinary", "TRANSIENT GAS", "Chemical", "02 engineering and technology", "Wildfire", "MOISTURE", "0902 Automotive Engineering", "01 natural sciences", "0201 civil engineering", "Engineering", "Smouldering", "Heat transfer", "Biomass", "PEAT FIRES", "0105 earth and related environmental sciences", "Multidisciplinary", "Science & Technology", "Energy", "CONSUMPTION", "15. Life on land", "Mechanical", "Fire", "Engineering", " Mechanical", "IGNITION", "13. Climate action", "Physical Sciences", "PARTICLE EMISSIONS", "Thermodynamics", "0913 Mechanical Engineering"], "contacts": [{"organization": "Christensen, EG, Fernandez-Anez, N, Rein, G,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.combustflame.2019.11.001"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Combustion%20and%20Flame", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.combustflame.2019.11.001", "name": "item", "description": "10.1016/j.combustflame.2019.11.001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.combustflame.2019.11.001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-04-01T00:00:00Z"}}, {"id": "10.1016/j.still.2006.07.009", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:16:17Z", "type": "Journal Article", "created": "2006-09-08", "title": "Storage And Forms Of Organic Carbon In A No-Tillage Under Cover Crops System On Clayey Oxisol In Dryland Rice Production (Cerrados, Brazil)", "description": "The management and enhancement of soil organic carbon (SOC) is very important for agriculture (fertility) as well as for the environment (carbon (C) sequestration). Consequently, changes in soil management may alter SOC content. No-tillage (NT) practices are potential ways to increase SOC. We studied the SOC from agricultural soils in the Cerrados in Central Brazil. We compared two different tillage systems: conservation agriculture with no-tillage under cover crops (NT) and disc tillage (DT) for 5 years in a context of rainfed rice production. The soil is a dark red oxisol with high clay content (about 40%). The objectives of the study were: (i) to evaluate the short-term (5 years) impact of tillage systems on SOC stocks in an oxisol and (ii) to better understand the dynamics of SOC in different fractions of this soil. We first studied the initial situation in 1998, and compared it to the 2003 situation. NT with cover crop (Crotalaria) was found to increase the storage of C in the topsoil layer (0-10 cm) compared to DT. The difference observed for the 0-10 cm layer under NT in comparison with DT represented C enrichment under no-tillage amounting to 0.35 Mg C ha-1 year-1 and corresponding to less than 10% of cover crops residues returned to the soil. A particle-size fractionation of soil organic matter (SOM) showed that differences in total SOC between NT and DT mainly affected the 0-2 \u00b5m fraction and, to a smaller extent the 2-20 \u00b5m fraction. This specific enrichment of SOC in the silt and clay fraction was attributed to (i) the storage of a water soluble C in the field and (ii) the effect of soil biota and especially fauna activity. The mean residence time of carbon associated with the fine fractions being rather long, it might be assumed that the preferential storage in fine fractions resulted in a long-term carbon storage. This study suggests a positive short-term effect of a no-tillage system on C sequestration in an oxisol. \u00a9 2006 Elsevier B.V. All rights reserved", "keywords": ["P33 - Chimie et physique du sol", "http://aims.fao.org/aos/agrovoc/c_2858", "Oryza sativa", "fractionnement", "[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study", "SOIL ORGANIC CARBON", "01 natural sciences", "630", "CERRADOS", "PARTICLE-SIZE FRACTIONATION OF SOM", "CARBON SEQUESTRATION", "culture sous couvert v\u00e9g\u00e9tal", "no tillage", "OXISOL", "ferralsol", "http://aims.fao.org/aos/agrovoc/c_1301", "[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil study", "http://aims.fao.org/aos/agrovoc/c_8511", "http://aims.fao.org/aos/agrovoc/c_35657", "0105 earth and related environmental sciences", "F07 - Fa\u00e7ons culturales", "2. Zero hunger", "Cerrados", "http://aims.fao.org/aos/agrovoc/c_1977", "non-travail du sol", "04 agricultural and veterinary sciences", "15. Life on land", "carbon sequestration", "http://aims.fao.org/aos/agrovoc/c_331583", "particle size fractionation of SOM", "s\u00e9questration du carbone", "http://aims.fao.org/aos/agrovoc/c_3074", "oxisol", "http://aims.fao.org/aos/agrovoc/c_1070", "13. Climate action", "http://aims.fao.org/aos/agrovoc/c_25706", "http://aims.fao.org/aos/agrovoc/c_5438", "0401 agriculture", " forestry", " and fisheries", "NO-TILLAGE", "Crotalaria", "carbone", "Brazil", "RIZ", "mati\u00e8re organique du sol"]}, "links": [{"href": "https://doi.org/10.1016/j.still.2006.07.009"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20and%20Tillage%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.still.2006.07.009", "name": "item", "description": "10.1016/j.still.2006.07.009", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.still.2006.07.009"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-05-01T00:00:00Z"}}, {"id": "10.1016/j.coisb.2021.100379", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:20Z", "type": "Journal Article", "created": "2021-09-09", "title": "Approaches for completing metabolic networks through metabolite damage and repair discovery", "description": "Metabolites are prone to damage, either via enzymatic side reactions, which collectively form the underground metabolism, or via spontaneous chemical reactions. The resulting non-canonical metabolites that can be toxic, are mended by dedicated 'metabolite repair enzymes.' Deficiencies in the latter can cause severe disease in humans, whereas inclusion of repair enzymes in metabolically engineered systems can improve the production yield of value-added chemicals. The metabolite damage and repair loops are typically not yet included in metabolic reconstructions and it is likely that many remain to be discovered. Here, we review strategies and associated challenges for unveiling non-canonical metabolites and metabolite repair enzymes, including systematic approaches based on high-resolution mass spectrometry, metabolome-wide side-activity prediction, as well as high-throughput substrate and phenotypic screens.", "keywords": ["0301 basic medicine", "0303 health sciences", "03 medical and health sciences", ": Biochemistry", " biophysics & molecular biology [F05] [Life sciences]", ": Biochimie", " biophysique & biologie mol\u00e9culaire [F05] [Sciences du vivant]", "Article"]}, "links": [{"href": "https://doi.org/10.1016/j.coisb.2021.100379"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Current%20Opinion%20in%20Systems%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.coisb.2021.100379", "name": "item", "description": "10.1016/j.coisb.2021.100379", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.coisb.2021.100379"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-12-01T00:00:00Z"}}, {"id": "10.1016/j.colsurfa.2018.05.091", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:20Z", "type": "Journal Article", "created": "2018-05-30", "title": "Protein affinity for TiO2 and CeO2 manufactured nanoparticles. From ultra-pure water to biological media", "description": "Abstract   In this study, we investigated the Bovine Serum Albumin (BSA) protein affinity for manufactured metal oxide nanoparticles (NPs), respectively TiO2 and CeO2. Changes in the NPs surface charge property and resulting stability were investigated by considering pH-dependent electrostatic scenarios and contrasting solution conditions from ultra-pure water to more complex biological mixtures regarding the ionic and protein composition. After careful characterization of NPs and BSA as a function of pH, we used variable BSA concentrations to study the impact of BSA adsorption and we found that protein affinity for NPs was largely controlled by electrostatic interactions. We demonstrated that in ultra-pure water increasing gradually the BSA concentration results in aggregation when BSA and NPs charges are opposite (charge neutralization). On the other hand, when NPs were added in a solution containing BSA, aggregation was prevented due to corona formation. Then, the ultrapure water was replaced by Dulbecco\u2019s phosphate-buffered saline (DPBS) to mimic the blood composition and ionic strength. BSA was then replaced by fetal calf serum (FCS) to mimic the great variety of proteins and other biomolecules found in the blood. Our findings indicate that, in all cases, initially dispersed TiO2 or CeO2 NPs are stabilized by the presence of proteins and that protein adsorption is fast regarding NPs homoaggregation. Proteins are found to improve NPs dispersion even at high ionic strength with overarching consequences on the fate, transport and related risk of NPs in living systems.", "keywords": ["Aggregation", "info:eu-repo/classification/ddc/550", "TiO2 and CeO2", "ddc:550", "0211 other engineering and technologies", "Nanoparticles", "Protein adsorption", "02 engineering and technology", "01 natural sciences", "Protein affinity", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.colsurfa.2018.05.091"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Colloids%20and%20Surfaces%20A%3A%20Physicochemical%20and%20Engineering%20Aspects", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.colsurfa.2018.05.091", "name": "item", "description": "10.1016/j.colsurfa.2018.05.091", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.colsurfa.2018.05.091"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-09-01T00:00:00Z"}}, {"id": "10.1016/j.csbj.2021.04.023", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:21Z", "type": "Journal Article", "created": "2021-04-19", "title": "ADP-ribosylation systems in bacteria and viruses", "description": "ADP-ribosylation is an ancient posttranslational modification present in all kingdoms of life. The system likely originated in bacteria where it functions in inter- and intra-species conflict, stress response and pathogenicity. It was repeatedly adopted via lateral transfer by eukaryotes, including humans, where it has a pivotal role in epigenetics, DNA-damage repair, apoptosis, and other crucial pathways including the immune response to pathogenic bacteria and viruses. In other words, the same ammunition used by pathogens is adapted by eukaryotes to fight back. While we know quite a lot about the eukaryotic system, expanding rather patchy knowledge on bacterial and viral ADP-ribosylation would give us not only a better understanding of the system as a whole but a fighting advantage in this constant arms race. By writing this review we hope to put into focus the available information and give a perspective on how this system works and can be exploited in the search for therapeutic targets in the future. The relevance of the subject is especially highlighted by the current situation of being amid the world pandemic caused by a virus harbouring and dependent on a representative of such a system.", "keywords": ["0301 basic medicine", "0303 health sciences", "ADP-ribosylation ; ADP-ribosyl transferase ; ADP-ribosyl hydrolase ; PARP ; PARG ; Macrodomain ; Toxin-antitoxin system", "ADP-ribosyl transferase", "Toxin-antitoxin system", "Review Article", "ADP-ribosyl hydrolase", "PARP", " PARG", "PARP", "3. Good health", "03 medical and health sciences", "PARG", "Biology", "TP248.13-248.65", "ADP-ribosylation", "Macrodomain", "Biotechnology"], "contacts": [{"organization": "Mikol\u010devi\u0107, Petra, Hlou\u0161ek-Kasun, Andrea, Ahel, Ivan, Miko\u010d, Andreja,", "roles": ["creator"]}]}, "links": [{"href": "http://fulir.irb.hr/6483/1/MikolcevicP_ADP-ribosylation_CSBJ19_2021_%202366.pdf"}, {"href": "https://doi.org/10.1016/j.csbj.2021.04.023"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Computational%20and%20Structural%20Biotechnology%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.csbj.2021.04.023", "name": "item", "description": "10.1016/j.csbj.2021.04.023", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.csbj.2021.04.023"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.1016/j.dib.2024.111226", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:21Z", "type": "Journal Article", "created": "2024-12-11", "title": "A harmonized dataset relating alternative farmer management practices to crop yield, soil organic carbon stock, nitrous oxide emissions, and nitrate leaching generated using IPCC methodologies and meta-analyses", "description": "Farming practices such as soil tillage, organic/mineral fertilization, irrigation, crop selection and residues management influence multiple ecosystem services provided by agricultural systems. These practices exhibit complex, non-linear interrelationships that affect crop productivity, water quality, and non-carbon dioxide greenhouse gases (GHG) emissions, possibly offsetting their benefits regarding soil organic carbon (SOC) sequestration. Current methodologies from the Intergovernmental Panel on Climate Change (IPCC) for assessing the impacts of alternative farming practices on GHG emissions rely on global or country-specific coefficients. However, these methods often do not explicitly account for the combined effects of management practices on carbon and nitrogen cycles or productivity, as this is not required for national GHG inventories. Here we present a new dataset featuring 1.8 Mln of agronomic case scenarios, i.e., unique combinations of farming practices and pedoclimatic conditions, which have been associated with values of SOC changes, nitrous oxide emissions, nitrate-nitrogen leaching, and crop yield. To synthesize trade-offs and synergies between farming practices, each case scenario has been ranked with a \u2211ommit index (\u2211i) value, a fuzzy-based measure ranging from 0 (bad) to 1 (good). The four trade-off components have been estimated by combining available information from i) the 2019 Refinement to the 2006 IPCC Guidelines for National Greenhouse Gas Inventories, ii) the guidelines for Green Water Footprint Accounting, iii) the Italian National Institute of Statistics, iv) and other international meta-analytic studies. The dataset presents four \u2211i series, corresponding to alternative perceptions of sustainability from three potential stakeholder categories (young farmers\u2019 cooperative, agrochemical company, public agricultural policy agency) plus one equally weighted option. By providing a harmonized data source and an innovative metric, this dataset allows users to explore trade-offs associated with alternative management practices across four key agricultural components and assess their impact on perceived agroecosystem sustainability.", "keywords": ["Soil management", "Crop choice", "Q1-390", "Science (General)", "Computer applications to medicine. Medical informatics", "Farming sustainability", "R858-859.7", "Organic matter inputs", "Greenhouse gases emissions", "Data Article"]}, "links": [{"href": "https://doi.org/10.1016/j.dib.2024.111226"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Data%20in%20Brief", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.dib.2024.111226", "name": "item", "description": "10.1016/j.dib.2024.111226", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.dib.2024.111226"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-02-01T00:00:00Z"}}, {"id": "10.1016/j.csbj.2022.08.002", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:21Z", "type": "Journal Article", "created": "2022-08-08", "title": "Streptomyces coelicolor macrodomain hydrolase SCO6735 cleaves thymidine-linked ADP-ribosylation of DNA", "description": "ADP-ribosylation is an ancient, highly conserved, and reversible covalent modification critical for a variety of endogenous processes in both prokaryotes and eukaryotes. ADP-ribosylation targets proteins, nucleic acids, and small molecules (including antibiotics). ADP-ribosylation signalling involves enzymes that add ADP-ribose to the target molecule, the (ADP-ribosyl)transferases; and those that remove it, the (ADP-ribosyl)hydrolases. Recently, the toxin/antitoxin pair DarT/DarG composed of a DNA ADP-ribosylating toxin, DarT, and (ADP-ribosyl)hydrolase antitoxin, DarG, was described. DarT modifies thymidine in single-stranded DNA in a sequence-specific manner while DarG reverses this modification, thereby rescuing cells from DarT toxicity. We studied the DarG homologue SCO6735 which is highly conserved in all Streptomyces species and known to be associated with antibiotic production in the bacterium S. coelicolor. SCO6735 shares a high structural similarity with the bacterial DarG and human TARG1. Like DarG and TARG1, SCO6735 can also readily reverse thymidine-linked ADP-ribosylation catalysed by DarT in vitro and in cells. SCO6735 active site analysis including molecular dynamic simulations of its complex with ADP-ribosylated thymidine suggests a novel catalytic mechanism of DNA-(ADP-ribose) hydrolysis. Moreover, a comparison of SCO6735 structure with ALC1-like homologues revealed an evolutionarily conserved feature characteristic for this subclass of macrodomain hydrolases.", "keywords": ["0301 basic medicine", "570", "0303 health sciences", "ADP-ribosylation", " DNA ADP-ribosylation", " Macrodomain", " Streptomyces", " SCO6735", "SCO6735", "540", "Streptomyces", "DNA ADP-ribosylation", "03 medical and health sciences", "TP248.13-248.65", "ADP-ribosylation", "Macrodomain", "Biotechnology", "Research Article"]}, "links": [{"href": "https://doi.org/10.1016/j.csbj.2022.08.002"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Computational%20and%20Structural%20Biotechnology%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.csbj.2022.08.002", "name": "item", "description": "10.1016/j.csbj.2022.08.002", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.csbj.2022.08.002"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "10.1016/j.dib.2025.111585", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-20T16:15:21Z", "type": "Journal Article", "created": "2025-05-01", "title": "Dataset on physico-chemical characteristics of Exogenous Organic Matters (EOMs) gathered from various European countries", "description": "Many activities generate organic wastes, including urban activities (e.g., biowaste, sewage sludge), industry (e.g. vinasse) and agriculture (e.g., livestock manure, crop residues). Exogenous Organic Matters (EOMs) are secondary raw materials, i.e., wastes and residues from agriculture, municipalities or industry, which are either used as such or further processed with different technologies. The large variability in the raw materials and production technologies increases the diversity of EOM characteristics, which in turn affect their efficacy when applied to soils. The datapaper presents the database \u201cPhysico-chemical characteristics of Exogenous Organic Matters (EOMs)\u201d which is available in the Zenodo repository (https://doi.org/10.5281/zenodo.13969793). The database is a non-relational database in column format established in the framework of the EJP SOIL EOM4SOIL project, which aimed at establishing a database on EOM\u2019s characteristics. The database gathered EOM characteristics collected in national databases and surveys from 6 European countries, and completed by data published in scientific articles. It describes physico-chemical characteristics of 126 types of EOMs encompassing urban, industrial and agricultural origins (e.g. urine, biowastes, sewage sludge, farmyard manures) and 91 characteristics (e.g. major elements, trace metals, emerging organic contaminants, pathogens, potentially mineralised C and N). There is an average of about 20 variables collected per type of EOM. Preliminary description of the EOM characteristics database is proposed in the present datapaper using descriptive statistics. The characteristics of the 126 types of EOMs provide valuable insights that can help farmers, policymakers, and agricultural consultants to optimize the use of these materials in fertilization and soil amendment practices. This knowledge is essential for better management of EOM application practices by the farmers in order to increase soil carbon stocks and reduce the reliance on mineral fertilizers.", "keywords": ["[SDE] Environmental Sciences", "[SDV.SA.AGRO] Life Sciences [q-bio]/Agricultural sciences/Agronomy", "Science (General)", "Computer applications to medicine. Medical informatics", "Digestate", "R858-859.7", "Compost", "Urine", "Sludge Urine", "Sludge", "Biochar", "Livestock manure", "Q1-390", "[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil study", "Composition", "Data Article"]}, "links": [{"href": "https://doi.org/10.1016/j.dib.2025.111585"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Data%20in%20Brief", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.dib.2025.111585", "name": "item", "description": "10.1016/j.dib.2025.111585", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.dib.2025.111585"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-06-01T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Article&offset=50&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Article&offset=50&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "prev", "title": "items (prev)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Article&offset=0", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Article&offset=100", "hreflang": "en-US"}], "numberMatched": 1365, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-09-21T14:47:50.253841Z"}