{"type": "FeatureCollection", "features": [{"id": "10.1016/j.ecoleng.2016.06.124", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:26Z", "type": "Journal Article", "created": "2016-07-26", "title": "Effects of grazing exclusion on carbon sequestration and plant diversity in grasslands of China A meta-analysis", "description": "Abstract   Widespread land degradation has strengthened the urgent need to restore overgrazing grasslands. China has implemented the program \u2018Returning Grazing Land to Grassland\u2019 (RGLG) through grazing exclusion by fence since 2003. Despite a lot of field experiments, there is still controversy on the effects of grazing exclusion on rangeland restoration, highlighting the need for synthetic analysis. We conducted a meta-analysis of 447 entries from 78 papers to analyze the spatiotemporal effects of grazing exclusion on plant diversity, productivity and soil carbon sequestration in the major RGLG-implemented provinces of China. Our results showed that, compared with the grazed sites, grazing exclusion significantly increased carbon stored in aboveground biomass, litter mass, belowground biomass and soils by 84.7%, 111.6%, 25.5% and 14.4%, respectively. Plant coverage, soil available nitrogen, soil available phosphorus and soil microbial biomass carbon increased by 52.0%, 21.7% 22.8% and 26.3%, respectively. However, grazing exclusion had little effects on recovering plant diversity in China\u2019s grasslands. Of the factors examined, climatic factors strongly modified the effects of grazing exclusion on ecosystem carbon stocks, for example, precipitation significantly amplified the positive effects. Grazing exclusion played a positive role in soil carbon sequestration in most grassland types except in temperate desert-steppe. But annual soil carbon sequestration rates decayed rapidly over time in both alpine meadow and temperate steppe. Short-term (\u22645\u00a0years) grazing exclusion remarkably increased species richness, but not significantly in the long run. The threshold from neutral to negative effects of grazing exclusion on species evenness occurs after approximately ten years. Our findings provide evidence that grazing exclusion is an effective way to restore vegetation and sequestrate carbon in degraded grasslands, but not beneficial to plant diversity maintenance. The benefits of grazing exclusion are more effective in humid area than arid area. We suggest that grazing exclusion should be ceased after about six to ten years. Additionally, grazing exclusion should integrate with other appropriate management practices instead of operating on a stand-alone basis.", "keywords": ["2. Zero hunger", "0106 biological sciences", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.ecoleng.2016.06.124"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Engineering", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ecoleng.2016.06.124", "name": "item", "description": "10.1016/j.ecoleng.2016.06.124", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ecoleng.2016.06.124"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-01T00:00:00Z"}}, {"id": "10.1016/j.foreco.2003.11.014", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:42Z", "type": "Journal Article", "created": "2004-03-06", "title": "Wildfires In Nw Patagonia: Long-Term Effects On A Nothofagus Forest Soil", "description": "In NW Patagonia, Argentina, poor regeneration after fires of Nothofagus pumilio (Poepp. and Endl.) Krasser forests located in drier environments has been attributed to probable edaphic changes. We studied the long-term effects of wildfire on the mineralogical, physical, chemical and biological properties of a soil developed from volcanic-ashes under N. pumilio forests. Soils from six small patches burned in January 1996 and of undisturbed forest were sampled at a depth of 0-10 cm in March 1996,1997, 1998 and 2000. As biological soil indicators we assessed N in microbial biomass (N-MB) and potential N mineralization (pNmin). Chemical properties were analyzed for all 4 years in dry samples, N-BM and pNmin in rewetted samples in 1996 and 1997, and in field-moist samples in 1998 (pNmin) and 2000 (N-MB). Additionally, we measured soil moisture twice during the growing seasons of 1998 and 2000 at 0-16 cm, and mineralogical and physical properties once in 1998. The main effects of fire were: (i) a significant increase in pH, electrical conductivity, extractable P and cations (Ca, Mg, Na, K) and a significant decrease in organic C and total N; 4 years after the fire, C and N were still, respectively, 52 and 20% lower, pH was one unit higher, and electrical conductivity and extractable P were twice as high as in the unburned control; (ii) a considerable decrease in N-MB (>90%), without significant recovery in subsequent years; (iii) an increase of pNmin at the beginning of the incubation period, decreasing afterwards to only 4-44% the levels in the unburned soil; and (iv) a decrease of 31% in field capacity and 56% in soil moisture. No mineralogical changes in the amorphous soil components were observed. Although volcanic soils show a high capacity to stabilize organic matter, buffer pH, retain P and store water, the magnitude of the changes of all soil properties indicated that the intensity of the fire was very high, and might have a powerful effect on seedling emergence and survival. (C) 2003 Published by Elsevier B.V. (Less)", "keywords": ["0106 biological sciences", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "Estela Raffaele, Mar\u00eda Julia Mazzarino, Luc\u00eda Roselli, Mar\u0131\u0301a Victoria Alauzis,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.foreco.2003.11.014"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Forest%20Ecology%20and%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.foreco.2003.11.014", "name": "item", "description": "10.1016/j.foreco.2003.11.014", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.foreco.2003.11.014"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-05-01T00:00:00Z"}}, {"id": "10.1016/j.foreco.2010.07.002", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:47Z", "type": "Journal Article", "created": "2010-08-04", "title": "Thinning Method And Intensity Influence Long-Term Mortality Trends In A Red Pine Forest", "description": "Tree mortality shapes forest development, but rising mortality can represent lost production or an adverse response to changing environmental conditions. Thinning represents a strategy for reducing mortality rates, but different thinning techniques and intensities could have varying impacts depending on how they alter stand structure. We analyzed trends in stand structure, relative density, stand-scale mortality, climate, and correlations between mortality and climate over 46 years of thinning treatments in a red pine forest in Northern Minnesota, USA to examine how thinning techniques that remove trees of different crown classes interact with growing stock manipulation to impact patterns of tree mortality. Relative density in unharvested plots increased during the first 25 years of the study to around 80%, then began to plateau, but was lower (12-62%) in thinned stands. Mortality in unharvested plots claimed 2.5 times more stems yr\u22121 and 8.6 times as large a proportion of annual biomass increment during the last 21 years of the study compared to the first 25 years, but showed few temporal trends in thinned stands. Mortality in thinning treatments was generally lower than in controls, particularly during the last 21 years of the study when mortality averaged about 0.1% of stems yr \u22121 and 4% of biomass increment across thinning treatments, but 0.8% of stems yr \u22121 and 49% of biomass increment in unharvested plots. Treatments that combined thinning from above with low growing stock levels represented an exception, where mortality exceeded biomass production after initial thinning. Mortality averaged less than 0.1% of stems yr\u22121 and less than 1% of annual biomass production in stands thinned from below. These trends suggest thinning from below minimizes mortality across a wide range of growing stock levels while thinning from above to low growing stock levels can result in dramatic short-term increases in mortality. Moderate to high growing stock levels (21-34 m 2 ha \u22121 ) may offer greater flexibility for limiting mortality across a range of thinning methods. Mean and maximum annual and growing season temperatures rose by 0.6-1.8 \u25e6C during the study, and temperature variables were positively correlated with mortality in unharvested plots. Mortality increases in unharvested plots, however, were consistent with self-thinning principles and probably not driven by rising temperatures. These results suggest interactions between thinning method and intensity influence mortality reductions associated with thinning, and demonstrate the need for broader consideration of developmental processes as potential explanations for increased", "keywords": ["0106 biological sciences", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.foreco.2010.07.002"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Forest%20Ecology%20and%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.foreco.2010.07.002", "name": "item", "description": "10.1016/j.foreco.2010.07.002", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.foreco.2010.07.002"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-08-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2012.03.010", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:54Z", "type": "Journal Article", "created": "2012-05-08", "title": "Two Decades Of Low-Severity Prescribed Fire Increases Soil Nutrient Availability In A Midwestern, Usa Oak (Quercus) Forest", "description": "Abstract   For the last 23\u00a0years, low-severity prescribed fire has been used to decrease shade and fire tolerant tree species, increase oak ( Quercus  spp.), and increase herbaceous plant diversity in the East Woods of The Morton Arboretum, Lisle, Illinois, USA. The impacts of these fires on the belowground ecosystem have yet to be measured. Soil (0 to 10\u00a0cm) and litter samples were collected 12, 19, and 24\u00a0months following the most recent fire on 40 plots in burned and un-burned control areas. Soil physical, chemical, and biological properties were measured and compared with vegetation composition and structure from these same plots. Compared to un-burned controls, burn plots had greater canopy openness, greater herbaceous richness, and a lower spring/summer herbaceous ratio. Burned plots had higher soil moisture content, pH, electrical conductivity, Ca 2\u00a0+ , Mg 2\u00a0+ , K + , Na + , NO 3  \u2212 , total N, particulate organic matter (POM), total organic C, and potential N mineralization. Soil microbial biomass and respiration, texture, color, aggregate stability, and hydrophobicity were not different in burned compared to un-burned plots. Indices of litter and soil invertebrate diversity were also not affected by prescribed fire. Three stepwise least squares models predicted woody richness, herbaceous richness, and spring/summer herbs with aspect, litter invertebrate richness, and soil factors (pH, potential N mineralization, C/N ratio, Mg 2\u00a0+ , Bray P, and soil invertebrate Simpson index). These results confirm others showing prescribed fire to increase soil nutrient availability. Forest structural changes with fire appear correlated with soil nutrient availability. Decreased soil C, nutrient retention, invertebrate diversity, or increased hydrophobicity and the presence of exotic plants is often observed with high-severity fire; but, these negative impacts do not appear to be present with these long-term, low-severity fires.", "keywords": ["0106 biological sciences", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "K.A. Jacobs, Marlin L. Bowles, Bryant C. Scharenbroch, B. Nix,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2012.03.010"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2012.03.010", "name": "item", "description": "10.1016/j.geoderma.2012.03.010", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2012.03.010"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-08-01T00:00:00Z"}}, {"id": "10.1023/a:1021366911279", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:18:07Z", "type": "Journal Article", "created": "2003-03-21", "description": "Short-term improved fallow technology, which is characterised by deliberate planting of fast growing N2 fixing legumes species in rotation with crops is currently being promoted for soil fertility replenishment in the small holder farms in the tropics. Recent research and extension efforts on this technology have mainly focused on a narrow range of species. There is a need to evaluate more alternative species in order to diversify the options available to farmers and hence reduce the risks of over dependence on fewer species. We evaluated twenty-two shrubby and herbaceous species for their site adaptability, biomass and nutrient accumulation, biomass quality and maize yield response to soil incorporated plant biomass after the fallow (six and twelve months) in three different field experiments on a Kandiudalfic Eutrudox in western Kenya. Species which yielded large amounts ofthe most biomass N adequate for two to three maize crops were Sesbania sesban, Tephrosia vogelii, Tephrosia candida, Crotalaria grahamiana, Dodonea viscosa, Colopogonium mucunoides, Desmondium uncinatum, Glycine wightii and Macroptilium atropurpureum. Most fallow species tested recycled  10%) and polyphenol (>2%) concentrations. were found only in the shrubby species, and the (Ppolyphenol + lignin ): N ratio varied widely (0.3\u20135) amongst the species. evaluated. Maize yield increased by two-fold in the first season following the fallow phase compared with continuous maize for most species. Results suggest that there are a wide variety of legumes that could be used for use in improved fallow technologies aimed at ameliorating nutrient degraded soils and subsequently enhancing crop yields.", "keywords": ["2. Zero hunger", "0106 biological sciences", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "S. Gathumbi, A.I. Niang, J. de Wolf, B.A. Amadalo,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1023/a:1021366911279"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agroforestry%20Systems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1023/a:1021366911279", "name": "item", "description": "10.1023/a:1021366911279", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1023/a:1021366911279"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2002-11-01T00:00:00Z"}}, {"id": "10.1093/plphys/kiad398", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:03Z", "type": "Journal Article", "created": "2023-07-10", "title": "Aromatic amino acid biosynthesis impacts root hair development and symbiotic associations inLotus japonicus", "description": "Abstract<p>Legume roots can be symbiotically colonized by arbuscular mycorrhizal (AM) fungi and nitrogen-fixing bacteria. In Lotus japonicus, the latter occurs intracellularly by the cognate rhizobial partner Mesorhizobium loti or intercellularly with the Agrobacterium pusense strain IRBG74. Although these symbiotic programs show distinctive cellular and transcriptome signatures, some molecular components are shared. In this study, we demonstrate that 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase 1 (DAHPS1), the first enzyme in the biosynthetic pathway of aromatic amino acids (AAAs), plays a critical role in root hair development and for AM and rhizobial symbioses in Lotus. Two homozygous DAHPS1 mutants (dahps1-1 and dahps1-2) showed drastic alterations in root hair morphology, associated with alterations in cell wall dynamics and a progressive disruption of the actin cytoskeleton. The altered root hair structure was prevented by pharmacological and genetic complementation. dahps1-1 and dahps1-2 showed significant reductions in rhizobial infection (intracellular and intercellular) and nodule organogenesis and a delay in AM colonization. RNAseq analysis of dahps1-2 roots suggested that these phenotypes are associated with downregulation of several cell wall\uffe2\uff80\uff93related genes, and with an attenuated signaling response. Interestingly, the dahps1 mutants showed no detectable pleiotropic effects, suggesting a more selective recruitment of this gene in certain biological processes. This work provides robust evidence linking AAA metabolism to root hair development and successful symbiotic associations.</p", "keywords": ["580", "Plant biology", "570", "Phenotype", "Mycorrhizae", "Lotus", "Symbiosis", "Root Nodules", " Plant", "Plant Roots", "Research Article"]}, "links": [{"href": "https://academic.oup.com/plphys/article-pdf/193/2/1508/51727974/kiad398.pdf"}, {"href": "https://doi.org/10.1093/plphys/kiad398"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Physiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/plphys/kiad398", "name": "item", "description": "10.1093/plphys/kiad398", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/plphys/kiad398"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-07-10T00:00:00Z"}}, {"id": "10.1111/gcb.12819", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:23Z", "type": "Journal Article", "created": "2014-12-05", "title": "Soil Warming And Co2 Enrichment Induce Biomass Shifts In Alpine Tree Line Vegetation", "description": "Abstract<p>Responses of alpine tree line ecosystems to increasing atmospheric CO2 concentrations and global warming are poorly understood. We used an experiment at the Swiss tree line to investigate changes in vegetation biomass after 9\uffc2\uffa0years of free air CO2 enrichment (+200\uffc2\uffa0ppm; 2001\uffe2\uff80\uff932009) and 6\uffc2\uffa0years of soil warming (+4\uffc2\uffa0\uffc2\uffb0C; 2007\uffe2\uff80\uff932012). The study contained two key tree line species, Larix decidua and Pinus uncinata, both approximately 40\uffc2\uffa0years old, growing in heath vegetation dominated by dwarf shrubs. In 2012, we harvested and measured biomass of all trees (including root systems), above\uffe2\uff80\uff90ground understorey vegetation and fine roots. Overall, soil warming had clearer effects on plant biomass than CO2 enrichment, and there were no interactive effects between treatments. Total plant biomass increased in warmed plots containing Pinus but not in those with Larix. This response was driven by changes in tree mass (+50%), which contributed an average of 84% (5.7\uffc2\uffa0kg\uffc2\uffa0m\uffe2\uff88\uff922) of total plant mass. Pinus coarse root mass was especially enhanced by warming (+100%), yielding an increased root mass fraction. Elevated CO2 led to an increased relative growth rate of Larix stem basal area but no change in the final biomass of either tree species. Total understorey above\uffe2\uff80\uff90ground mass was not altered by soil warming or elevated CO2. However, Vaccinium myrtillus mass increased with both treatments, graminoid mass declined with warming, and forb and nonvascular plant (moss and lichen) mass decreased with both treatments. Fine roots showed a substantial reduction under soil warming (\uffe2\uff88\uff9240% for all roots &lt;2\uffc2\uffa0mm in diameter at 0\uffe2\uff80\uff9320\uffc2\uffa0cm soil depth) but no change with CO2 enrichment. Our findings suggest that enhanced overall productivity and shifts in biomass allocation will occur at the tree line, particularly with global warming. However, individual species and functional groups will respond differently to these environmental changes, with consequences for ecosystem structure and functioning.</p>", "keywords": ["0106 biological sciences", "2. Zero hunger", "Models", " Statistical", "Temperature", "Larix", "Carbon Dioxide", "15. Life on land", "Pinus", "Global Warming", "01 natural sciences", "Soil", "Species Specificity", "13. Climate action", "Biomass", "Tundra", "Switzerland"]}, "links": [{"href": "https://doi.org/10.1111/gcb.12819"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.12819", "name": "item", "description": "10.1111/gcb.12819", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.12819"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-01-30T00:00:00Z"}}, {"id": "10.1111/gcbb.12255", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:27Z", "type": "Journal Article", "created": "2015-02-19", "title": "Bioenergy Harvest, Climate Change, And Forest Carbon In The Oregon Coast Range", "description": "Abstract<p>Forests provide important ecological, economic, and social services, and recent interest has emerged in the potential for using residue from timber harvest as a source of renewable woody bioenergy. The long\uffe2\uff80\uff90term consequences of such intensive harvest are unclear, particularly as forests face novel climatic conditions over the next century. We used a simulation model to project the long\uffe2\uff80\uff90term effects of management and climate change on above\uffe2\uff80\uff90 and belowground forest carbon storage in a watershed in northwestern Oregon. The multi\uffe2\uff80\uff90ownership watershed has a diverse range of current management practices, including little\uffe2\uff80\uff90to\uffe2\uff80\uff90no harvesting on federal lands, short\uffe2\uff80\uff90rotation clear\uffe2\uff80\uff90cutting on industrial land, and a mix of practices on private nonindustrial land. We simulated multiple management scenarios, varying the rate and intensity of harvest, combined with projections of climate change. Our simulations project a wide range of total ecosystem carbon storage with varying harvest rate, ranging from a 45% increase to a 16% decrease in carbon compared to current levels. Increasing the intensity of harvest for bioenergy caused a 2\uffe2\uff80\uff933% decrease in ecosystem carbon relative to conventional harvest practices. Soil carbon was relatively insensitive to harvest rotation and intensity, and accumulated slowly regardless of harvest regime. Climate change reduced carbon accumulation in soil and detrital pools due to increasing heterotrophic respiration, and had small but variable effects on aboveground live carbon and total ecosystem carbon. Overall, we conclude that current levels of ecosystem carbon storage are maintained in part due to substantial portions of the landscape (federal and some private lands) remaining unharvested or lightly managed.\uffc2\uffa0Increasing the intensity of harvest for bioenergy on currently harvested land, however,\uffc2\uffa0led to a relatively small reduction in the ability of forests to store carbon. Climate change is unlikely to substantially alter carbon storage in these forests, absent shifts in disturbance regimes.</p>", "keywords": ["0106 biological sciences", "Carbon dioxide mitigation", "Forest ecology -- Oregon -- Oregon Coast Range", "Forest biomass", "13. Climate action", "Carbon cycle (Biogeochemistry)", "Biomass energy", "Forest Biology", "15. Life on land", "01 natural sciences", "7. Clean energy", "Climatic change", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/gcbb.12255"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcbb.12255", "name": "item", "description": "10.1111/gcbb.12255", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcbb.12255"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-05-25T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2009.02121.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:35Z", "type": "Journal Article", "created": "2009-12-22", "title": "Functional Changes In The Control Of Carbon Fluxes After 3 Years Of Increased Drought In A Mediterranean Evergreen Forest?", "description": "Abstract<p>Our objective was to test how a long\uffe2\uff80\uff90term increased water limitation affects structural and functional properties of a Mediterranean ecosystem, and how these changes modify the response of the main carbon fluxes to climatic controls. In 2003, a 27% throughfall exclusion experiment was installed in a Quercus ilex L. forest in France. Gross primary production (GPP), ecosystem respiration (RECO) and net ecosystem exchange (NEE) were estimated in a control and a dry treatment. Decreasing throughfall decreased GPP by 14% and had a smaller effect on RECO (\uffe2\uff88\uff9212%), especially soil respiration RS (\uffe2\uff88\uff9211%). Interannual variability of GPP (29%) was higher than for RECO (12%). Error propagation was used to estimates uncertainties in the NEE fluxes, which ranged from 3% to 10% in the control treatment but up to 167% for NEE in the dry treatment because more steps and data types were involved in the scaling. After 3 years of throughfall exclusion, we found no acclimation of RS to climatic drivers. Functional properties of the response of RS to soil water, temperature and rain pulse remained similar in the control and the dry treatments. A diurnal clockwise hysteresis in RS was probably controlled by canopy photosynthesis with a 3\uffe2\uff80\uff83h lag. The proportion of diurnal variation of respiration due to photosynthesis was similar in all treatments (4\uffe2\uff80\uff935%). Because of the characteristic of rain in Mediterranean climates, a continuous decrease of water input in these environments have an effect on topsoil water and consequently on RS only during short periods when rainfall is characterized by infrequent and small events that does not allow the topsoil to reach field capacity and does not allow to dry completely. However, in the longer term, we expect a stronger decrease in RS in the dry treatment driven by the decrease in GPP.</p>", "keywords": ["0106 biological sciences", "550", "15. Life on land", "gross primary production", "soil respiration", "01 natural sciences", "630", "6. Clean water", "Quercus ilex", "throughfall exclusion", "13. Climate action", "rain pulse", "eddy-covariance", "Q(10)", "error propagation", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2009.02121.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2009.02121.x", "name": "item", "description": "10.1111/j.1365-2486.2009.02121.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2009.02121.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-08-01T00:00:00Z"}}, {"id": "10.1128/aem.02264-23", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:56Z", "type": "Journal Article", "created": "2024-02-19", "title": "Novel endolithic bacteria of phylum             Chloroflexota             reveal a myriad of potential survival strategies in the Antarctic desert", "description": "ABSTRACT                                     <p>               The ice-free McMurdo Dry Valleys of Antarctica are dominated by nutrient-poor mineral soil and rocky outcrops. The principal habitat for microorganisms is within rocks (endolithic). In this environment, microorganisms are provided with protection against sub-zero temperatures, rapid thermal fluctuations, extreme dryness, and ultraviolet and solar radiation. Endolithic communities include lichen, algae, fungi, and a diverse array of bacteria.               Chloroflexota               is among the most abundant bacterial phyla present in these communities. Among the               Chloroflexota               are four novel classes of bacteria, here named               Candidatus               Spiritibacteria class. nov. (=UBA5177),               Candidatus               Martimicrobia class. nov. (=UBA4733),               Candidatus               Tarhunnaeia class. nov. (=UBA6077), and               Candidatus               Uliximicrobia class. nov. (=UBA2235). We retrieved 17 high-quality metagenome-assembled genomes (MAGs) that represent these four classes. Based on genome predictions, all these bacteria are inferred to be aerobic heterotrophs that encode enzymes for the catabolism of diverse sugars. These and other organic substrates are likely derived from lichen, algae, and fungi, as metabolites (including photosynthate), cell wall components, and extracellular matrix components. The majority of MAGs encode the capacity for trace gas oxidation using high-affinity uptake hydrogenases, which could provide energy and metabolic water required for survival and persistence. Furthermore, some MAGs encode the capacity to couple the energy generated from H               2               and CO oxidation to support carbon fixation (atmospheric chemosynthesis). All encode mechanisms for the detoxification and efflux of heavy metals. Certain MAGs encode features that indicate possible interactions with other organisms, such as Tc-type toxin complexes, hemolysins, and macroglobulins.             </p>                            IMPORTANCE               <p>                 The ice-free McMurdo Dry Valleys of Antarctica are the coldest and most hyperarid desert on Earth. It is, therefore, the closest analog to the surface of the planet Mars. Bacteria and other microorganisms survive by inhabiting airspaces within rocks (endolithic). We identify four novel classes of phylum                 Chloroflexota                 , and, based on interrogation of 17 metagenome-assembled genomes, we predict specific metabolic and physiological adaptations that facilitate the survival of these bacteria in this harsh environment\uffe2\uff80\uff94including oxidation of trace gases and the utilization of nutrients (including sugars) derived from lichen, algae, and fungi. We propose that such adaptations allow these endolithic bacteria to eke out an existence in this cold and extremely dry habitat.               </p>", "keywords": ["570", "Bacteria", "Fungi", "Antarctic Regions", "Chloroflexi", "15. Life on land", "Survival strategies", "Cold Temperature", "Extremophiles", "13. Climate action", "Antarctica", "Endolithic communities", "Metagenomics", "14. Life underwater", "Sugars", "Settore BIO/19 - MICROBIOLOGIA GENERALE"]}, "links": [{"href": "https://doi.org/10.1128/aem.02264-23"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20and%20Environmental%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1128/aem.02264-23", "name": "item", "description": "10.1128/aem.02264-23", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1128/aem.02264-23"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-02-19T00:00:00Z"}}, {"id": "10.1139/x04-063", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:59Z", "type": "Journal Article", "created": "2004-10-08", "title": "Loss And Recovery Of Ecosystem Carbon Pools Following Stand-Replacing Wildfire In Michigan Jack Pine Forests", "description": "<p> We used a 72-year chronosequence to study the loss and recovery of ecosystem C pools following stand-replacing wildfire in Michigan, USA, jack pine (Pinus banksiana Lamb.) forests. We quantified the amount of C stored in aboveground plant biomass, standing dead timber, downed dead wood, surface organic soil, and mineral soil in 11 jack pine stands that had burned between 1 and 72 years previously. Total ecosystem C ranged from a low of 59 Mg C\uffc2\uffb7ha&#150;1 in the 4-year-old stand to 110 Mg C\uffc2\uffb7ha&#150;1 in the 72-year-old stand. Changes in total ecosystem C across the chronosequence conformed to theoretical predictions, in which C stocks declined initially as decomposition of dead wood and forest-floor C exceeded production by regenerating vegetation, and then increased asymptotically with the development of a new stand of jack pine. This pattern was well described by the following 'gamma' function: total ecosystem C (Mg\uffc2\uffb7ha&#150;1) = 112.2 &#150; 39.6 \uffc3\uff97 age0.351 \uffc3\uff97 exp(&#150;0.053 \uffc3\uff97 age01.039); mean-corrected R2 = 0.976. Using the first derivative of this parameterized gamma function, we estimated that jack pine stands function as a weak source of C to the atmosphere for only ca. 6 years following wildfire, and reach a maximum net ecosystem productivity of 1.6 Mg C\uffc2\uffb7ha&#150;1\uffc2\uffb7year&#150;1 by year 16. We attribute the rapid transition from carbon source to carbon sink in these ecosystems to two factors: (i) stand-replacing wildfires in these xeric forests leave behind little respirable substrate in surface organic horizons, and (ii) jack pine is able to rapidly reestablish following wildfires via serotinous cones. Jack pine stands remained net sinks for C across the chronosequence; however, net ecosystem productivity had declined to 0.12 C ha&#150;1\uffc2\uffb7year&#150;1 by year 72. Carbon sequestration by mature jack pine ecosystems was driven primarily by continued growth of overstory jack pine, not by accumulation of detrital C. </p>", "keywords": ["0106 biological sciences", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"]}, "links": [{"href": "https://doi.org/10.1139/x04-063"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Canadian%20Journal%20of%20Forest%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1139/x04-063", "name": "item", "description": "10.1139/x04-063", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1139/x04-063"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-09-01T00:00:00Z"}}, {"id": "10.1139/x93-128", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:20:01Z", "type": "Journal Article", "created": "2007-07-20", "title": "Effects Of Selected Forest Management-Practices On Environmental Parameters Related To Successional Development On The Tanana River Floodplain, Interior Alaska", "description": "<p> Two mature floodplain white spruce (Piceaglauca (Moench) Voss) ecosystems (stage VIII) located on islands in the Tanana River, approximately 20\uffe2\uff80\uff82km southwest of Fairbanks, Alaska, were clear-cut during the winter of 1985\uffe2\uff80\uff931986 to quantify the effects of clear-cutting on selected environmental characteristics. Clearings in earlier successional stages (poplar\uffe2\uff80\uff93alder (Populus\uffe2\uff80\uff93Alnus), stage V; and open willow (Salix), stage III) were used to contrast the environmental parameters with the earlier stages found in the primary successional sequence. After clear-cutting, total radiation at the soil surface increased to early successional stage III levels. Potential evaporation from the soil surface increased 5-fold as a result of clearing in the stage VIII sites and was substantially greater than that found in the stage III sites by other researchers. Clearing had relatively little effect on air temperature. The concentration of P and K was significantly lower in the forest floor of both clearcuts, and the concentration of C was significantly higher at VIII-A-T (stage VIII\uffe2\uff80\uff93site A\uffe2\uff80\uff93treated (cleared) plot) when compared with the control stands. There was a decrease in total forest floor biomass at both clear-cut plots. Organic matter, total N, available NH4 and P, and extractable Mg and K all decreased after cutting, whereas pH increased. Decomposition of spruce foliage on the forest floor surface was slower in the clearcuts. Nitrogen immobilization occurred during the first 2 years of decomposition. During the third year it appeared that some mineralization was beginning to occur but the levels were very low, averaging only 3\uffe2\uff80\uff82mg N per bag in the clear-cut areas. Plant growth analysis indicated that growth was limited by high mineral soil salt content in the early successional stages (III) and that this limitation was species specific. Balsam poplar (Populusbalsamifera L.) appears to be more tolerant of the high cation content of the stage III sites compared with trembling aspen (Populustremuloides Michx.). By the time successional development has progressed to stage V, the soil has been sufficiently augmented by the inclusion of organic matter from the developing vegetation and the fixation of N by alder to result in higher seedling growth rates in the cleared areas. </p>", "keywords": ["0106 biological sciences", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "John Yarie", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1139/x93-128"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Canadian%20Journal%20of%20Forest%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1139/x93-128", "name": "item", "description": "10.1139/x93-128", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1139/x93-128"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1993-05-01T00:00:00Z"}}, {"id": "10.20381/ruor-18782", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:20:48Z", "created": "2008-01-01", "description": "Numerous forest fires occurred during the summer of 2004 in the Klondike Goldfields region of the Yukon Territory, an area of extensive discontinuous permafrost. More than 35 shallow detachment failure landslides developed in subsequent weeks in Steele Creek, a small drainage basin located about 60 km south of Dawson City. Preliminary observations of the failures and near-surface thermal regime were made through freeze-up of 2004 and continued in the summers of 2005 and 2006. Detachment failures were mapped and individual sites were surveyed. Air and ground temperatures were measured in burned and unburned areas. In addition, two-dimensional DC resistivity transects were used to examine subsurface conditions in the area. Forest fire contributed to detachment failure activity on permafrost slopes by destroying the surface organic mat, causing burned surface temperatures to rise, thawing active layers by up to 20 cm (+31%) deeper than unburned slopes and weakening the surface root structures. Deeper thaw melted transient layer ground ice, raising soil porewater pressures. The thermal differences between burned and unburned sites were greater at the north-facing than south-facing sites, and active layer freezing and thawing processes varied according to both aspect and burned status. More southerly-facing and/or burned sites generally thawed earlier, refroze later and had warmer temperatures than more northerly and/or unburned sites. Thaw of burned areas with high ground surface temperatures can be expected to continue, depending on climatic conditions, until sufficient revegetation occurs to shade the surface and rebuild the insulating organic mat. The detachment failures occurred from a few weeks to two years after forest fire, and only on slopes where permafrost was extensive. They were not similar to others in the literature in that almost all occurred in coarse-gained soils and had failure planes elevated above the permafrost table. These landslides were flow-type failures that rafted portions of the organic mat on top of deforming, non-cohesive sediment. They occurred in areas of deeper thaw but their distribution and the resistivity data suggest that they were associated with supra-permafrost taliks which concentrated groundwater flow. In an unglaciated area like the Klondike region this landsliding process has likely occurred thousands of times during the Pleistocene and may be responsible for elements of the form of the region's slopes. Predicted increases in the frequency and magnitude of forest fire in the boreal forest due to warming climates may increase incidence of these types of failures.", "keywords": ["Ecology", "Physical Geography", "550", "13. Climate action", "Forestry and Wildlife", "Physical Geography.", "Agriculture", "15. Life on land", "Biology", " Ecology.", "Biology", "Agriculture", " Forestry and Wildlife."], "contacts": [{"organization": "Coates, James", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.20381/ruor-18782"}, {"rel": "self", "type": "application/geo+json", "title": "10.20381/ruor-18782", "name": "item", "description": "10.20381/ruor-18782", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.20381/ruor-18782"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-01-01T00:00:00Z"}}, {"id": "10.1894/mh-34.1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:20:47Z", "type": "Journal Article", "created": "2009-03-03", "title": "Influence Of Rainfall, Type Of Range, And Brush Management On Abundance Of Northern Bobwhites (Colinus Virginianus) In Southern Texas", "description": "Assessing numerical response of northern bobwhites (Colinus virginianus) to habitat improvement in semi-arid rangeland often is confounded by responses of populations to highly variable patterns of rainfall. During 2 years of above-average rainfall, we investigated abundance of northern bobwhites relative to type of range and treatments to reduce brush on seven ranches in southern Texas. We expected response of populations to treatment of land to be more evident when northern bobwhites were released from constraints of low precipitation. However, main factors dominating abundance were rainfall during the previous growing season and type of range. Greatest numbers of calls were in mid- productivity rangeland (potential production of forage 2,000-3,900 kg/ha), especially sandy loam, clay loam, sandy, and gravelly ridge. Treatments to reduce brush increased abundance of northern bobwhites to a limited extent and were most effective when large blocks of land were treated. Techniques that kill brush (root-plowing) were more successful in increasing populations than top- removal methods (roller-chopping). Leaving strips or mottes (large clumps of living brush and trees) in cleared areas did not enhance populations, although we caution that retaining some brush cover may be important to survival of northern bobwhites in drier years and in situations where herbaceous cover is less abundant. RESUMEN\u2014Determinar la respuesta numerica de codornices nortenas (Colinus virginianus )at ecnicas para mejorar el habitat en pastizales semiaridos es confundido por las respuestas poblacionales a patrones altamente variables de precipitacion. Durante dos anos de precipitacion ma alta que la media, investigamos la abundancia de codornices con respecto al tipo de pastizal y tratamientos para reducir arbustos en siete ranchos en el sur de Texas. Esperamos la respuesta de la poblacion al tratamiento de la tierra ser mas evidente cuando las codornices fueron liberadas de los apremios de baja precipitacion. Sin embargo, los factores mas dominantes para determinar la abundancia fueron la precipitacion durante la estacion de crecimiento anterior y el tipo de pastizal. Mas silbidos fueron registrados en los pastizales de productividad mediana (produccion de forraje potencial de 2.000-3.900 kg/ha), especialmente en pastizales con suelos marga-arenosos, marga-arcillosos, arenosos, y pastizales en bordes pedregosos. Tratamientos para reducir arbustos aumentaron la abundancia de codornices a un grado limitado y fueron mas eficaces cuando terrenos grandes fueron tratados. Los tratamientos de remocion de arbustos (remocion de rao \u00b4ces) fueron mas exitosos para incrementar la poblacion que los metodos de remocion superior (la eliminacion de biomasa aerea). Dejando bandas o grandes grupos de arbustos y arboles en areas despejadas no mejorolas poblaciones, aunque consideramos importante indicar que retener alguna cobertura arbustiva podro \u00b4a ser importante para la supervivencia de codornices en anos mas secos y en situaciones donde la cobertura herbacea es menor.", "keywords": ["2. Zero hunger", "0106 biological sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "Susan M. Cooper, James C. Cathey, D. Lang Alford, Shane S. Sieckenius,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1894/mh-34.1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/The%20Southwestern%20Naturalist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1894/mh-34.1", "name": "item", "description": "10.1894/mh-34.1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1894/mh-34.1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-03-01T00:00:00Z"}}, {"id": "10.2307/2425191", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:21:22Z", "type": "Journal Article", "created": "2006-04-24", "title": "Nutrient Limitations To Plant-Growth In A California Serpentine Grassland", "description": "Nitrogen and phosphorus were identified as nutrients limiting the growth of plants in an herbaceous community on serpentine soil. Potassium, sulfur and calcium additions had little or no effect. Nutrients were added, alone and in combination, to plots in the field and to greenhouse pots of serpentine soil containing the annual grasses, Bromus mollis and Vulpia microstachys. The absence of any effect due to added calcium indicates that calcium deficiency is not a universal explanation of the low primary production on serpentine soils. INTRODUCTION Wherever they are found, serpentine soils support a vegetation that differs from that on surrounding nonserpentine soils in productivity, floristic composition and often physiognomy. It is now clear that a considerable degree of variability in physical and chemical properties is found among soils classified as serpentine. Thus the phenomenon cannot be ascribed to a single cause but rather a family of causes that vary in importance from site to site. Most notable among these are low levels of the major nutrients, nitrogen, phosphorus and potassium, low levels of calcium combined with high magnesium, and high concentrations of the potentially toxic elements, nickel, chromium and cobalt (Proctor and Woodell, 1975). Serpentine outcrops are common in the California Coastal Mountains as part of the Franciscan formation (Page, 1966). Among these is an outcrop supporting an herbaceous plant community contained within the Jasper Ridge Biological Preserve. The low productivity and floristic uniqueness of this grassland has been well-documented by McNaughton (1968). The consequences of its low productivity for foliage canopy development and potential light competition were studied by Turitzin (1978). No one, however, has reported on the causes of its low productivity. The present study was undertaken to analyze nutrient limitations to plant growth on this serpentine soil. MATERIALS AND METHODS The Jasper Ridge Biological Preserve occupies half of a low-lying ridge on the eastern side of the Santa Cruz Mountains in San Mateo Co., Calif. The crest of the ridge, which reaches an elevation of 189 m, supports an extensive area of annual grassland. A serpentine outcrop, obliquely bisecting the ridge, is occupied by a mixture of annuals and herbaceous perennials. The climate is of the Mediterranean type with warm, dry summers and cool, wet winters. Plants are active from October until May. Nutrient limitations to productivity in the field were studied on experimental plots arranged in a randomized complete blocks design (Sokal and Rohlf, 1969). Treatments were applied to nine 0.25m2 square plots arranged in 1 x 2.5 m blocks that included an untreated control plot. Blocks were replicated six times. Nutrient supplements were applied on 12 January and 12 March 1975. On each occasion nitrogen, phosphorus or potassium, or various combinations were added as solutions of reagent grade NH4NO3 (28.6g m2),. NaH2PO4 * H20 (19.4g m-2) and K2S04 (18.5g m2). Calcium applied as powdered agricultural grade gypsum (calcium sulfate, 1OOg m-2) was added in January only. Aboveground biomass contained within a 0.09 m2 quadrat was harvested from the center of each plot during late April. 'Present address: University Honors Program and School of Life and Health Sciences, University of Delaware, Newark 1971 1.", "keywords": ["0106 biological sciences", "2. Zero hunger", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "Stephen N. Turitzin", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.2307/2425191"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/American%20Midland%20Naturalist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2307/2425191", "name": "item", "description": "10.2307/2425191", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2307/2425191"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1982-01-01T00:00:00Z"}}, {"id": "10.3368/er.28.3.304", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:21:34Z", "type": "Journal Article", "created": "2010-08-06", "description": "Pine-oak forests cover 14.2 million hectares in Mexico, a country that has the richest pine and oak diversity in the world. These diverse forests are a source of goods and services for rural and urban society, but they are being degraded and deforested. A cause of degradation is the alteration of the fire regime caused by fire exclusion or excessive burning. Little information is available on how to restore ecologically appropriate fire regimes in Mexican pine-oak ecosystems. Less is known about the fire ecology of the oak species. To determine which of these pine-oak and oak forests are fire-maintained and which are sensitive to fires, and to provide insight into the restoration of appropriate fire regimes, this paper categorizes oak species according to the following characteristics: climate and type of vegetation, environment and succession, fire regime, growth form, vegetative regeneration, regeneration niche, acorn size, foliage type, bark thickness, subgenus, and understory. Frequent low-intensity surface fires are recommended for the restoration and maintenance of many of these forests and to reduce the ecological, economic, and firefighting impacts that result from large-magnitude wildfires, although it is recognized that for some species of pine and oak, periodic high-intensity fires are required. Because the source of more than 40% of the wildfires in Mexico is agricultural and grazing activities, it is essential to consider the needs of rural communities who use fire for their livelihood, and how burning might help restore and maintain these ecosystems.    Resumen:    Los bosques de pino-encino cubren 14.2 millones de hectareas en Mexico, pais que cuenta con la mayor diversidad de pinos y encinos en el planeta. Estos bosques son fuente de bienes y servicios para la sociedad rural y urbana, pero estan siendo degradados y deforestados. Una fuente de degradacion es la alteracion de los regimenes de fuego ocasionada por la exclusion del fuego o por incendios excesivos. Existe poca informacion relativa a la restauracion de regimenes de fuego ecologicamente adecuados en los ecosistemas de pino-encino mexicanos. Hay todavia menos informacion sobre la ecologia del fuego en encinares. Para determinar cuales de esos bosques son mantenidos por los incendios, cuales son sensibles y proveer informacion para la restauracion de regimenes de fuego adecuados, este trabajo categoriza las especies de encinos acorde con las siguientes caracteristicas: clima y tipo de vegetacion, ambiente y sucesion, regimen de fuego, forma de crecimiento, regeneracion vegetativa, nicho de regeneracion, tamano de la bellota, tipo de follaje, grosor de corteza, subgenero y sotobosque. El fuego frecuente, de baja intensidad, es recomendado para la restauracion y mantenimiento de muchos de estos bosques y para reducir los impactos ecologicos, economicos y de combate que resultan de incendios de gran magnitud, aunque se reconoce que para algunas especies de pino y encino se necesita fuego periodico de alta intensidad. Debido a que la fuente de mas de 40 por ciento de los incendios en Mexico son las actividades agropecuarias, es esencial considerar la necesidad de la gente en las comunidades rurales, quienes utilizan el fuego en sus sistemas de produccion, y como el uso del fuego puede ayudar a restaurar y a mantener estos ecosistemas.", "keywords": ["0106 biological sciences", "01 natural sciences"], "contacts": [{"organization": "Dante Arturo Rodr\u00edguez-Trejo, Ronald L. Myers,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.3368/er.28.3.304"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Restoration", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3368/er.28.3.304", "name": "item", "description": "10.3368/er.28.3.304", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3368/er.28.3.304"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-08-06T00:00:00Z"}}, {"id": "10.3389/fmicb.2016.01446", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:21:37Z", "type": "Journal Article", "created": "2016-09-14", "description": "Soil management is fundamental to all agricultural systems and fertilization practices have contributed substantially to the impressive increases in food production. Despite the pivotal role of soil microorganisms in agro-ecosystems, we still have a limited understanding of the complex response of the soil microbiota to organic and mineral fertilization in the very long-term. Here, we report the effects of different fertilization regimes (mineral, organic and combined mineral and organic fertilization), carried out for more than a century, on the structure and activity of the soil microbiome. Organic matter content, nutrient concentrations, and microbial biomass carbon were significantly increased by mineral, and even more strongly by organic fertilization. Pyrosequencing revealed significant differences between the structures of bacterial and fungal soil communities associated to each fertilization regime. Organic fertilization increased bacterial diversity, and stimulated microbial groups (Firmicutes, Proteobacteria, and Zygomycota) that are known to prefer nutrient-rich environments, and that are involved in the degradation of complex organic compounds. In contrast, soils not receiving manure harbored distinct microbial communities enriched in oligotrophic organisms adapted to nutrient-limited environments, as Acidobacteria. The fertilization regime also affected the relative abundances of plant beneficial and detrimental microbial taxa, which may influence productivity and stability of the agroecosystem. As expected, the activity of microbial exoenzymes involved in carbon, nitrogen, and phosphorous mineralization were enhanced by both types of fertilization. However, in contrast to comparable studies, the highest chitinase and phosphatase activities were observed in the solely mineral fertilized soil. Interestingly, these two enzymes showed also a particular high biomass-specific activities and a strong negative relation with soil pH. As many soil parameters are known to change slowly, the particularity of unchanged fertilization treatments since 1902 allows a profound assessment of linkages between management and abiotic as well as biotic soil parameters. Our study revealed that pH and TOC were the majors, while nitrogen and phosphorous pools were minors, drivers for structure and activity of the soil microbial community. Due to the long-term treatments studied, our findings likely represent permanent and stable, rather than transient, responses of soil microbial communities to fertilization.", "keywords": ["Soil nutrients", "0301 basic medicine", "2. Zero hunger", "0303 health sciences", "long-term fertilization", "microbial biomass", "15. Life on land", "microbial activity", "Microbiology", "QR1-502", "03 medical and health sciences", "13. Climate action", "soil microbial communities", "soil nutrients", "454 pyrosequencing"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2016.01446"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2016.01446", "name": "item", "description": "10.3389/fmicb.2016.01446", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2016.01446"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-14T00:00:00Z"}}, {"id": "10.3389/fmicb.2019.02597", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:21:38Z", "type": "Journal Article", "created": "2019-11-08", "title": "New Insights Into Cinnamoyl Esterase Activity of Oenococcus oeni.", "description": "Some strains of Oenococcus oeni possess cinnamoyl esterase activity that can be relevant in the malolactic stage of wine production liberating hydroxycinnamic acids that are precursors of volatile phenols responsible for sensory faults. The objective of this study was to better understand the basis of the differential activity between strains. After initial screening, five commercial strains of O. oeni were selected, three were found to exhibit cinnamoyl esterase activity (CE+) and two not (CE-). Although the use of functional annotation of genes revealed genotypic variations between the strains, no specific genes common only to the three CE+ strains could explain the different activities. Pasteurized wine was used as a natural source of tartrate esters in growth and metabolism experiments conducted in MRS medium, whilst commercial trans-caftaric acid was used as substrate for enzyme assays. Detoxification did not seem to be the main biological mechanism involved in the activity since unlike its phenolic cleavage products and their immediate metabolites (trans-caffeic acid and 4-ethylcatechol), trans-caftaric acid was not toxic toward O. oeni. In the case of the two CE+ strains OenosTM and CiNeTM, wine-exposed samples showed a more rapid degradation of trans-caftaric acid than the unexposed ones. The CE activity was present in all cell-free extracts of both wine-exposed and unexposed strains, except in the cell-free extracts of the CE- strain CH11TM. This activity may be constitutive rather than induced by exposure to tartrate esters. Trans-caftaric acid was totally cleaved to trans-caffeic acid by cell-free extracts of the three CE+ strains, whilst cell-free extracts of the CE- strain CH16TM showed significantly lower activity, although higher for the strains in experiments with no prior wine exposure. The EstB28 esterase gene, found in the genomes of the 5 strains, did not reveal any difference on the upstream regulation and transport functionality between the strains. This study highlights the complexity of the basis of this activity in wine related O. oeni population. Variable cinnamoyl esterases or/and membrane transport activities in the O. oeni strains analyzed and a possible implication of wine molecules could explain this phenomenon.", "keywords": ["0301 basic medicine", "0303 health sciences", "tartrate esters", "cinnamoyl esterase", "Tartrate esters", "Hydroxycinnamic acids", "Wine", "hydroxycinnamic acids", "[SDV.IDA] Life Sciences [q-bio]/Food engineering", "Microbiology", "QR1-502", "03 medical and health sciences", "Cinnamoyl esterase", "wine", "Oenococcus oeni"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2019.02597"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2019.02597", "name": "item", "description": "10.3389/fmicb.2019.02597", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2019.02597"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-11-08T00:00:00Z"}}, {"id": "10.3389/fmicb.2022.983823", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:21:39Z", "type": "Journal Article", "created": "2022-11-08", "title": "Long-term effects of early-life rumen microbiota modulation on dairy cow production performance and methane emissions", "description": "<p>Rumen microbiota modulation during the pre-weaning period has been suggested as means to affect animal performance later in life. In this follow-up study, we examined the post-weaning rumen microbiota development differences in monozygotic twin-heifers that were inoculated (T-group) or not inoculated (C-group) (n\uffe2\uff80\uff89=\uffe2\uff80\uff894 each) with fresh adult rumen liquid during their pre-weaning period. We also assessed the treatment effect on production parameters and methane emissions of cows during their 1st lactation period. The rumen microbiota was determined by the 16S rRNA gene, 18S rRNA gene, and ITS1 amplicon sequencing. Animal weight gain and rumen fermentation parameters were monitored from 2 to 12\uffe2\uff80\uff89months of age. The weight gain was not affected by treatment, but butyrate proportion was higher in T-group in month 3 (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.04). Apart from archaea (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.084), the richness of bacteria (p\uffe2\uff80\uff89&amp;lt;\uffe2\uff80\uff890.0001) and ciliate protozoa increased until month 7 (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.004) and anaerobic fungi until month 11 (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.005). The microbiota structure, measured as Bray\uffe2\uff80\uff93Curtis distances, continued to develop until months 3, 6, 7, and 10, in archaea, ciliate protozoa, bacteria, and anaerobic fungi, respectively (for all: p\uffe2\uff80\uff89=\uffe2\uff80\uff890.001). Treatment or age \uffc3\uff97 treatment interaction had a significant (p\uffe2\uff80\uff89&amp;lt;\uffe2\uff80\uff890.05) effect on 18 bacterial, 2 archaeal, and 6 ciliate protozoan taxonomic groups, with differences occurring mostly before month 4 in bacteria, and month 3 in archaea and ciliate protozoa. Treatment stimulated earlier maturation of prokaryote community in T-group before month 4 and earlier maturation of ciliate protozoa at month 2 (Random Forest: 0.75\uffe2\uff80\uff89month for bacteria and 1.5\uffe2\uff80\uff89month for protozoa). No treatment effect on the maturity of anaerobic fungi was observed. The milk production and quality, feed efficiency, and methane emissions were monitored during cow\uffe2\uff80\uff99s 1st lactation. The T-group had lower variation in energy-corrected milk yield (p\uffe2\uff80\uff89&amp;lt;\uffe2\uff80\uff890.001), tended to differ in pattern of residual energy intake over time (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.069), and had numerically lower somatic cell count throughout their 1st lactation period (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.081), but no differences between the groups in methane emissions (g/d, g/kg DMI, or g/kg milk) were observed. Our results demonstrated that the orally administered microbial inoculant induced transient changes in early rumen microbiome maturation. In addition, the treatment may influence the later production performance, although the mechanisms that mediate these effects need to be further explored.</p>", "keywords": ["microbiome modulation", "0301 basic medicine", "570", "ta412", "microbiome establishment", "Heifer", "dairy cow", "Rumen function", "Animal science", " dairy science", "Microbiology", "630", "Microbiome modulation", "QR1-502", "rumen function", "Microbiome establishment", "03 medical and health sciences", "Dairy cow", "heifer"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2022.983823"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2022.983823", "name": "item", "description": "10.3389/fmicb.2022.983823", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2022.983823"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-08T00:00:00Z"}}, {"id": "10.5061/dryad.wh70rxwww", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:22:32Z", "type": "Dataset", "created": "2024-06-19", "title": "Data from: Competition between mixo- and heterotrophic ciliates under dynamic resource supply", "description": "unspecifiedThe outcome of species competition strongly depends on the traits of the  competitors and associated trade-offs, as well as on environmental  variability. Here we investigate the relevance of consumer trait variation  for species coexistence in a ciliate consumer \u2013 microalgal prey system  under fluctuating regimes of resource supply. We focus on consumer  competition and feeding traits, and specifically on the consumer\u2019s ability  to overcome periods of resource limitation by mixotrophy, i. e. the  ability of photosynthetic carbon fixation via algal symbionts in addition  to phagotrophy. In a 48-day chemostat experiment, we investigated  competitive interactions of different heterotrophic and mixotrophic  ciliates of the genera Euplotes and Coleps under different resource  regimes, providing prey either continuously or in pulses under constant or  fluctuating light, entailing periods of resource depletion in fluctuating  environments, but overall providing the same amount of prey and light.  Although ultimate competition results remained unaffected, population  dynamics of mixotrophic and heterotrophic ciliates were significantly  altered by resource supply mode. However, the effects differed among  species combinations and changed over time. Whether mixotrophs or  heterotrophs dominated in competition strongly depended on the genera of  the competing species and thus species-specific differences in the minimum  resource requirements that are associated with feeding on shared prey,  nutrient uptake, light harvesting and access to additional resources such  as bacteria. Potential differences in the curvature of the species\u2019  resource-dependent growth functions may have further mediated the  species-specific responses to the different resource supply modes.  Overall, our study demonstrates that genus- or species-specific traits  other than related to nutritional mode may override the relevance of  acquired phototrophy by heterotrophs in competitive interactions, and that  the potential advantage of photosynthetic carbon fixation of  symbiont-bearing mixotrophs in competition with pure heterotrophs may  differ greatly among different mixotrophs, playing out under different  environmental conditions and depending on the specific requirements of the  species. Complex trophic interactions determine the outcome of  competition, which can only be understood by taking on a multidimensional  trait perspective.", "keywords": ["Ciliates", "mixotrophy", "FOS: Biological sciences", "coexistence", "resource fluctuations", "microalgae-ciliate symbiosis"], "contacts": [{"organization": "Fl\u00f6der, Sabine, Klauschies, Toni, Klaassen, Moritz, Stoffers, Tjardo, Lambrecht, Max, Moorthi, Stefanie,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.wh70rxwww"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.wh70rxwww", "name": "item", "description": "10.5061/dryad.wh70rxwww", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.wh70rxwww"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-06-23T00:00:00Z"}}, {"id": "11585/996230", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:26:15Z", "type": "Journal Article", "created": "2023-10-10", "title": "Beyond PLFA: Concurrent extraction of neutral and glycolipid fatty acids provides new insights into soil microbial communities", "description": "The analysis of phospholipid fatty acids (PLFAs) is one of the most common methods used to quantify the abundance, and analyse the community structure, of soil microbes. The PLFA extraction method can yield two additional lipid fractions\u2014neutral lipids and glycolipids\u2014which potentially hold additional, valuable information on soil microbial communities. Yet its quantitative sensitivity on complete neutral lipid (NLFA) and glycolipid fatty acid (GLFA) profiles has never been validated. In this study we tested (i) if the high-throughput PLFA method can be expanded to concurrently extract complete NLFA and GLFA profiles, as well as sterols, (ii) whether taxonomic specificities of signature fatty acids are retained across the three lipid fractions in pure culture strains, and (iii) whether NLFAs and GLFAs allow soil-specific fingerprinting to the same extent as PLFA analysis. By adjusting the polarity of chloroform with 2% ethanol for solid phase extraction, pure lipid standards were fully fractionated into neutral lipids, glycolipids, and phospholipids. Sterols eluted in the neutral lipid fraction, and a betaine lipid co-eluted with phospholipids. We found consistent taxonomic specificities of fatty acid markers across the three lipid fractions by analysing pure culture extracts representative of soil microbes. Fatty acid profiles from soil extracts, however, showed stronger differences between PLFAs, NLFAs, and GLFAs than between soil types. This indicates that PLFAs and NLFAs signify different community properties (biomass vs. carbon storage, putatively), and that GLFAs are sensitive markers for community traits which behave differently than PLFAs. Although we consistently found high abundances of characteristic sterols in fungal extracts, the PLFA extraction method only yielded miniscule amounts of ergosterol from soil extracts. We argue that concomitant measurement of fatty acid profiles from all three lipid fractions is a low-effort and potentially information-rich addition to the PLFA method, and discuss its applicability for soil microbial community analyses.", "keywords": ["0301 basic medicine", "2. Zero hunger", "106022 Mikrobiologie", "0303 health sciences", "15. Life on land", "Soil lipids", "03 medical and health sciences", "106026 \u00d6kosystemforschung", "NLFA", "Ergosterol", "Ergosterol; GLFA; NLFA; Phospholipid fatty acids; Soil lipids", "Phospholipid fatty acid", "soil lipids", "Phospholipid fatty acids", "106022 Microbiology", "GLFA", "106026 Ecosystem research"]}, "links": [{"href": "https://doi.org/11585/996230"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11585/996230", "name": "item", "description": "11585/996230", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11585/996230"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-12-01T00:00:00Z"}}, {"id": "1854/LU-8732814", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:26:24Z", "type": "Journal Article", "created": "2021-11-09", "title": "Litter quality, mycorrhizal association, and soil properties regulate effects of tree species on the soil fauna community", "description": "Abstract   Forest management, including selection of appropriate tree species to mitigate climate change and sustain biodiversity, requires a better understanding of factors that affect the composition of soil fauna communities. These communities are an integral part of the soil ecosystem and play an essential role in forest ecosystem functioning related to carbon and nitrogen cycling. Here, by performing a field study across six common gardens in Denmark, we evaluated the effects of tree species identity and mycorrhizal association (i.e., arbuscular mycorrhiza (AM) and ectomycorrhiza (ECM)) on soil fauna (meso- and macrofauna) taxonomic and functional community composition by using diversity, abundance, and biomass as proxies. We found that (1) tree species identity and mycorrhizal association both showed significant effects on soil fauna communities, but the separation between community characteristics in AM and ECM tree species was not entirely consistent; (2) total soil fauna abundance, biomass, as well as taxonomic and functional diversity were generally significantly higher under AM tree species, as well as lime, with higher litter quality (high N and base cation and low lignin:N ratio); (3) tree species significantly influenced the properties of litter, forest floor, and soil, among which litter and/or forest floor N, P, Ca, and Mg concentrations, soil pH, and soil moisture predominantly affected soil fauna abundance, biomass, and taxonomic and functional diversity. Our results from this multisite common garden experiment provide strong and consistent evidence of positive effects of tree species with higher litter quality on soil fauna communities in general, which helps to better understand the effects of tree species selection on soil biodiversity and its functions related to forest soil carbon sequestration.", "keywords": ["DECOMPOSITION", "EARTHWORMS", "Diversity", "PH", "FOREST FLOOR", "Common garden experiment", "Soil meso- and macrofauna", "DIVERSITY", "Biology and Life Sciences", "04 agricultural and veterinary sciences", "15. Life on land", "NITROGEN", "CARBON", "Taxonomic group", "FUNCTIONAL TRAITS", "Abundance", "13. Climate action", "Earth and Environmental Sciences", "Functional group", "0401 agriculture", " forestry", " and fisheries", "BIODIVERSITY", "ABUNDANCE", "Biomass"]}, "links": [{"href": "https://doi.org/1854/LU-8732814"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1854/LU-8732814", "name": "item", "description": "1854/LU-8732814", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1854/LU-8732814"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-01T00:00:00Z"}}, {"id": "1959.7/uws:73855", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:26:30Z", "type": "Journal Article", "created": "2022-11-28", "title": "UV index and climate seasonality explain fungal community turnover in global drylands", "description": "AbstractAim<p>Fungi are major drivers of ecosystem functioning. Increases in aridity are known to negatively impact fungal community composition in dryland ecosystems globally; yet, much less is known on the potential influence of other environmental drivers, and whether these relationships are linear or nonlinear.</p>Time period<p>2017\uffe2\uff80\uff932021.</p>Location<p>Global.</p>Major taxa studied<p>Fungi.</p>Methods<p>We re\uffe2\uff80\uff90analysed multiple datasets from different dryland biogeographical regions, for a total of 912 samples and 1,483 taxa. We examined geographical patterns in community diversity and composition, and spatial, edaphic and climatic factors driving them.</p>Results<p>UV index, climate seasonality, and sand content were the most important environmental predictors of community shifts, showing the strongest association with the richness of putative plant pathogens and saprobes. Important nonlinear relationships existed with each of these fungal guilds, with increases in UV and temperature seasonality above 7.5 and 900 SD (standard deviation x 100 of the mean monthly temperature), respectively, being associated with an increased probability of plant pathogen and unspecified saprotroph occurrence. Conversely, these environmental parameters had a negative relationship with litter and soil saprotroph richness. Consequently, these ecological groups might be particularly sensitive to shifts in UV radiation and climate seasonality, which is likely to disturb current plant\uffe2\uff80\uff93soil dynamics in drylands.</p>Main conclusions<p>Our synthesis integrates fungal community data from drylands across the globe, allowing the investigation of fungal distribution and providing the first evidence of shifts in fungal diversity and composition of key fungal ecological groups along diverse spatial, climatic and edaphic gradients in these widely distributed ecosystems. Our findings imply that shifts in soil structure and seasonal climatic patterns induced by global change will have disproportionate consequences for the distribution of fungal groups linked to vegetation and biogeochemical cycling in drylands, with implications for plant\uffe2\uff80\uff93soil interactions in drylands.</p", "keywords": ["0106 biological sciences", "0301 basic medicine", "570", "drylands", "fungal traits", "Drylands", "Fungal traits", "Fungi", "500", "15. Life on land", "01 natural sciences", "Environmental predictors", "03 medical and health sciences", "climate change", "13. Climate action", "Settore BIO/07 - ECOLOGIA", "XXXXXX - Unknown", "Climate change", "fungi", "environmental predictors", "climate change; drylands; environmental predictors; fungal traits; fungi"]}, "links": [{"href": "https://openpub.fmach.it/bitstream/10449/78989/1/2023%20GEB%20Albanese.pdf"}, {"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/geb.13607"}, {"href": "https://doi.org/1959.7/uws:73855"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Ecology%20and%20Biogeography", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1959.7/uws:73855", "name": "item", "description": "1959.7/uws:73855", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1959.7/uws:73855"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-27T00:00:00Z"}}, {"id": "10.1016/j.fcr.2019.107659", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:41Z", "type": "Journal Article", "created": "2019-10-31", "title": "Does crop rotation yield more in China? A meta-analysis", "description": "Abstract   Crop rotation has been widely used to mitigate weed, insect, and pathogen pressure, as well as to increase plant diversity. However, the magnitude of and variability in crop yield with rotation in China remain uncertain. We conducted a meta-analysis on 45 studies with 214 comparisons to examine the effects of crop rotation on yield and to explore the importance of environmental factors and field management in determining yield variability. Rotation increased crop yields by 20% on average when compared with continuous monoculture practices. Effects of rotation on crop yield were more pronounced in southwestern China (+38%) than in eastern China (+10%) and were notably less reliable and generally smaller in regions with moderate annual rainfall (400\u2013550\u202fmm). Rotation had greater yield benefits in soils with coarse or medium soil textures, intermediate levels of initial soil organic carbon (7\u201310\u202fg kg\u22121), and lower total nitrogen (\u2264 1.2\u202fg kg\u22121). Effect of rotation on crop yield also depends on the type of previously cultivated crops (hereinafter, pre-crops), ranging from 2% for Triticeae pre-crops to 27% for grain leguminous pre-crops. Yield increase under legume-based rotations was 14% higher than that without legumes. The mean yield response of the crop subsequent to rotation ranged from 6% (cereals, except for Triticeae crops) to 34% (root crops). The legacy benefit of rotation on subsequent crop yield persisted for 2\u20133 years, decreasing from +31% in the second year to +8% in the third year. Effect of rotation on crop yield under conventional tillage was greater than that under conservation tillage. The yield benefit of rotation on subsequent crops was much higher with a lower nitrogen fertilization rate (\u2264 120\u202fkg ha\u22121), indicating that fertilization can be reduced and an acceptable yield maintained with crop rotation. In conclusion, crop rotation largely increases agricultural production without extra inputs, although its design may need to consider diverse climates, soils, crops, and management practices to maximize its agronomic and environmental benefits.", "keywords": ["0106 biological sciences", "2. Zero hunger", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.fcr.2019.107659"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Field%20Crops%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.fcr.2019.107659", "name": "item", "description": "10.1016/j.fcr.2019.107659", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.fcr.2019.107659"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-01-01T00:00:00Z"}}, {"id": "3129983189", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:27:29Z", "type": "Journal Article", "created": "2021-02-23", "title": "Using NDVI for the assessment of canopy cover in agricultural crops within modelling research", "description": "Open AccessPeer reviewed", "keywords": ["2. Zero hunger", "0106 biological sciences", "Meta-analysis", "Canopy cover", "NDVI", "Crop modelling", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"]}, "links": [{"href": "https://doi.org/3129983189"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Computers%20and%20Electronics%20in%20Agriculture", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "3129983189", "name": "item", "description": "3129983189", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/3129983189"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-03-01T00:00:00Z"}}, {"id": "10.1016/j.eja.2022.126515", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:30Z", "type": "Journal Article", "created": "2022-04-26", "title": "Simulating water lateral inflow and its contribution to spatial variations of rainfed wheat yields", "description": "Spatial variations of crop yields are commonly observed in typical rainfed systems worldwide. It is accepted that such variations are likely to be associated, among other factors, with water spatial variations due to lateral water flows occurring in fields with undulating topography. However, some of the main processes governing water spatial distribution such as lateral flow are not entirely considered by the most commonly adopted crop simulation models. This brings uncertainty to the process of yield simulation at field-scale, especially under water-limited conditions. Although it is expected that lateral water movement determines spatial variations of crop yields, it is still unclear what is the net contribution of lateral water inflows (LIF) to spatial variations of rainfed yields in fields of undulating topography. In this sense, by combining field experimentation, simulation models (HYDRUS-1D and AquaCrop), and the use of artificial neural networks, we assessed the occurrence and magnitude of LIF, and their impact on wheat yields in Cordoba, Spain, over a 30-year period. Seasonal precipitation varied over 30 years from 212.8 to 759.5 mm, and cumulative LIF ranged from 30 to 125 mm. The ratio of seasonal cumulative LIF divided by seasonal precipitation varied from 10.7% to 38.9% over the 30 years. The net contribution of LIF to spatial variations of rainfed potential yields showed to be relevant but highly irregular among years. Despite the inter-annual variability, typical of Mediterranean conditions, the occurrence of LIF caused simulated wheat yields to vary + 16% from up to downslope areas of the field. The net yield responses to LIF, in downslope areas were on average 383 kg grain yield (GY) ha\u22121, and the LIF marginal water productivity reached 24.6 ( \u00b1 13.2) kg GY ha\u22121 mm\u22121 in years of maximum responsiveness. Decision makers are encouraged to take water spatial variations into account when adjusting management to different potential yielding zones within the same field. However, this process is expected to benefit from further advances in in-season weather forecasting that should be coupled with a methodological approach such as the one presented here. This research received funding from the European Commission under project SHui - Grant agreement ID 773903 and also from the Spanish Government under Grant PID2019-105793RB-I00. Peer reviewed", "keywords": ["0106 biological sciences", "2. Zero hunger", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.eja.2022.126515"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/European%20Journal%20of%20Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.eja.2022.126515", "name": "item", "description": "10.1016/j.eja.2022.126515", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.eja.2022.126515"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-07-01T00:00:00Z"}}, {"id": "10.1007/s00442-003-1391-4", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:14:59Z", "type": "Journal Article", "created": "2003-12-10", "title": "Carbon Availability Controls The Growth Of Detritivores (Lumbricidae) And Their Effect On Nitrogen Mineralization", "description": "Activity of soil decomposer microorganisms is generally limited by carbon availability, but factors controlling saprophagous soil animals remain largely unknown. In contrast to microorganisms, animals are unable to exploit mineral nutrient pools. Therefore, it has been suggested that soil animals, and earthworms in particular, are limited by the availability of nitrogen. In contrast to this view, a strong increase in density and biomass of endogeic earthworms in response to labile organic carbon addition has been documented in field experiments. The hypothesis that the growth of endogeic earthworms is primarily limited by carbon availability was tested in a laboratory experiment lasting for 10 weeks. In addition, it was investigated whether the effects of earthworms on microbial activity and nutrient mineralization depend on the availability of carbon resources. We manipulated food availability to the endogeic earthworm species Octolasion tyrtaeum by using two soils with different organic matter content, providing access to different amounts of soil, and adding labile organic carbon (glucose) enriched in (13)C. Glucose addition strongly increased the growth of O. tyrtaeum. From 8 to 17% of the total C in earthworm tissue was assimilated from the glucose added. Soil microbial biomass was not strongly affected by the addition of glucose, though basal respiration was significantly increased and up to 50% of the carbon added as glucose was incorporated into soil organic matter. The impact of earthworms on the mineralization and leaching of nitrogen depended on C availability. As expected, in C-limited soil, the presence of earthworms strongly increased nitrogen leaching. However, when C availability was increased by the addition of glucose, this pattern was reversed, i.e. the presence of O. tyrtaeum decreased nitrogen leaching and its availability to soil microflora. We conclude that irrespective of the total carbon content of soils, O. tyrtaeum was primarily limited by carbon, and that increased carbon availability allowed earthworms to be more effective in mobilizing N. The presence of earthworms increases C limitation of soil microorganisms, due to increased availability of N and P in earthworm casts or a direct depletion of easily available carbon resources by earthworms.", "keywords": ["0106 biological sciences", "2. Zero hunger", "Carbon Isotopes", "Nitrogen", "Population Dynamics", "Biological Availability", "Phosphorus", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "Carbon", "Soil", "Animals", "0401 agriculture", " forestry", " and fisheries", "Oligochaeta", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1007/s00442-003-1391-4"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-003-1391-4", "name": "item", "description": "10.1007/s00442-003-1391-4", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-003-1391-4"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-01-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2018.12.007", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:57Z", "type": "Journal Article", "created": "2018-12-19", "title": "Organic carbon content controls the severity of water repellency and the critical moisture level across New Zealand pasture soils", "description": "<p>Organic matter can render soil hydrophobic and cause soil water repellency (SWR) which has large implications for agriculture. Consequences such as fingered flow, uneven wetting patterns, and increased overland flow reduce irrigation efficiency and plant nutrient availability. The phenomenon of SWR is a transient soil property depending, inter alia, on soil water content (w). Soil can exhibit SWR from oven-dry w until the critical w where it again becomes fully wettable (w<sub>NON</sub>). The total SWR can be obtained from the nonlinear SWR-w relationship as the integrated trapezoidal area under the SWR-w curve (SWR<sub>AREA</sub>). We analyzed 78 soil samples, representing five dominant soil orders in the South Island of New Zealand. The soils had a large range in clay (0.000\u20130.520 kg kg<sup>\u22121</sup>) and organic carbon (OC) content (0.021\u20130.217 kg kg<sup>\u22121</sup>). The degree of SWR was measured on soils at air-dry conditions (SWR<sub>AD</sub>) and after heat-pretreatment at 60 (SWR<sub>60</sub>) and 105\u00b0C (SWR<sub>105</sub>). Further, SWR was measured in small w increments above air-dry w until w<sub>NON</sub> was reached. The SWR-w curves were either unimodal or bimodal, or no SWR occurred. SWR<sub>AREA</sub> ranged from 0.16 to 26.82 mN m<sup>\u22121</sup> kg kg<sup>\u22121</sup>. Among the five soil orders tested, the Podzols exhibited the highest severity in SWR, whereas the Semiarid soils were the least hydrophobic soils. In conclusion, OC was the main factor for controlling the severity of SWR. Though, pH also had minor effects on SWR. Further, an upper limit critical water content was derived from the simple relationship between the w<sub>NON</sub> and OC, which could be applied to improve irrigation practices of pastoral soils. However, there is a need for further testing on different soils and land uses.</p>", "keywords": ["2. Zero hunger", "07 Agricultural and Veterinary Sciences", "05 Environmental Sciences", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "06 Biological Sciences", "910", "15. Life on land", "01 natural sciences", "6. Clean water", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2018.12.007"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2018.12.007", "name": "item", "description": "10.1016/j.geoderma.2018.12.007", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2018.12.007"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-03-01T00:00:00Z"}}, {"id": "10.1007/s00442-004-1788-8", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:14:59Z", "type": "Journal Article", "created": "2005-02-01", "title": "Effects Of Fire On Properties Of Forest Soils: A Review", "description": "Many physical, chemical, mineralogical, and biological soil properties can be affected by forest fires. The effects are chiefly a result of burn severity, which consists of peak temperatures and duration of the fire. Climate, vegetation, and topography of the burnt area control the resilience of the soil system; some fire-induced changes can even be permanent. Low to moderate severity fires, such as most of those prescribed in forest management, promote renovation of the dominant vegetation through elimination of undesired species and transient increase of pH and available nutrients. No irreversible ecosystem change occurs, but the enhancement of hydrophobicity can render the soil less able to soak up water and more prone to erosion. Severe fires, such as wildfires, generally have several negative effects on soil. They cause significant removal of organic matter, deterioration of both structure and porosity, considerable loss of nutrients through volatilisation, ash entrapment in smoke columns, leaching and erosion, and marked alteration of both quantity and specific composition of microbial and soil-dwelling invertebrate communities. However, despite common perceptions, if plants succeed in promptly recolonising the burnt area, the pre-fire level of most properties can be recovered and even enhanced. This work is a review of the up-to-date literature dealing with changes imposed by fires on properties of forest soils. Ecological implications of these changes are described.", "keywords": ["Nitrogen", "Phosphorus", "Fire", " Forest ecosystems", " Forest soils", " Soil ecology", " Soil properties.", "04 agricultural and veterinary sciences", "15. Life on land", "Invertebrates", "01 natural sciences", "Carbon", "Fires", "Trees", "Soil", "13. Climate action", "Animals", "0401 agriculture", " forestry", " and fisheries", "Hydrophobic and Hydrophilic Interactions", "Soil Microbiology", "0105 earth and related environmental sciences"], "contacts": [{"organization": "CERTINI, GIACOMO", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s00442-004-1788-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-004-1788-8", "name": "item", "description": "10.1007/s00442-004-1788-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-004-1788-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-02-02T00:00:00Z"}}, {"id": "10.1002/ecs2.1804", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:14:28Z", "type": "Journal Article", "created": "2017-05-10", "title": "Non-Target Impacts Of Weed Control On Birds, Mammals, And Reptiles", "description": "Abstract<p>The impacts of invasive plant control on native animals are rarely evaluated. Using data from an eight\uffe2\uff80\uff90year study in southeastern Australia, we quantified the effects on native bird, mammal, and reptile species of (1) the abundance of the invasive Bitou Bush, Chrysanthemoides monilifera ssp. rotundata, and (2) a Bitou Bush control program, which involved repeated herbicide spraying interspersed with prescribed burning. We found that overall species richness of birds, mammals, and reptiles and the majority of individual vertebrate species were unresponsive to Bitou Bush cover and the number of plants. Two species including the nationally endangered Eastern Bristlebird (Dasyurus brachypterus) responded positively to measures of native vegetation cover following the control of Bitou Bush. Analyses of the effects of different components of the treatment protocol employed to control Bitou Bush revealed (1) no negative effects of spraying on vertebrate species richness; (2) negative effects of spraying on only one individual species (Scarlet Honeyeater); and (3) lower bird species richness but higher reptile species richness after fire. The occupancy of most individual vertebrates species was unaffected by burning; four species responded negatively and one positively to fire. Our study indicated that actions to remove Bitou Bush generally have few negative impacts on native vertebrates. We therefore suggest that controlling this highly invasive exotic plant species has only very limited negative impacts on vertebrate biota.</p>", "keywords": ["0106 biological sciences", "weed control", "570", "Secondary effects", "off-target impacts", "animal response to weed control", "Indirect impacts", "Fire management", "590", "Non-target impacts", "herbicide impact on animals", "Herbicide impact on animals", "01 natural sciences", "invasive alien plant management", "fire management", "indirect impacts", "14. Life underwater", "non-target impacts", "Invasive alien plant management", "weed management impacts", "Animal response to weed control", "Bitou Bush", "580", "secondary effects", "Weed management impacts", "15. Life on land", "Weed control", "Off-target impacts", "3. Good health", "13. Climate action"]}, "links": [{"href": "https://eprints.soton.ac.uk/407435/1/Lindenmayer_et_al_2017_Ecopshere.pdf"}, {"href": "https://openresearch-repository.anu.edu.au/bitstream/1885/244051/3/01_Lindenmayer_Non-target_impacts_of_weed_2017.pdf.jpg"}, {"href": "https://doi.org/10.1002/ecs2.1804"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecosphere", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ecs2.1804", "name": "item", "description": "10.1002/ecs2.1804", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ecs2.1804"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-05-01T00:00:00Z"}}, {"id": "10.1002/ecy.1513", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:14:28Z", "type": "Journal Article", "created": "2016-07-02", "title": "Land Use Intensification In The Humid Tropics Increased Both Alpha And Beta Diversity Of Soil Bacteria", "description": "Abstract<p>Anthropogenic pressures on tropical forests are rapidly intensifying, but our understanding of their implications for biological diversity is still very limited, especially with regard to soil biota, and in particular soil bacterial communities. Here we evaluated bacterial community composition and diversity across a gradient of land use intensity in the eastern Amazon from undisturbed primary forest, through primary forests varyingly disturbed by fire, regenerating secondary forest, pasture, and mechanized agriculture. Soil bacteria were assessed by paired\uffe2\uff80\uff90end Illumina sequencing of 16S rRNA gene fragments (V4 region). The resulting sequences were clustered into operational taxonomic units (OTU) at a 97% similarity threshold. Land use intensification increased the observed bacterial diversity (both OTU richness and community heterogeneity across space) and this effect was strongly associated with changes in soil pH. Moreover, land use intensification and subsequent changes in soil fertility, especially pH, altered the bacterial community composition, with pastures and areas of mechanized agriculture displaying the most contrasting communities in relation to undisturbed primary forest. Together, these results indicate that tropical forest conversion impacts soil bacteria not through loss of diversity, as previously thought, but mainly by imposing marked shifts on bacterial community composition, with unknown yet potentially important implications for ecological functions and services performed by these communities.</p>", "keywords": ["Rios de composi\u00e7\u00e3o de comunidade bacteriana", "2. Zero hunger", "0301 basic medicine", "570", "0303 health sciences", "550", "Bacteria", "Biodiversidade subterr\u00e2nea", "Agriculture", "Biodiversity", "Forests", "15. Life on land", "Below\u2010ground biodiversity", "High\u2010throughput sequencing", "Soil", "03 medical and health sciences", "RNA", " Ribosomal", " 16S", "Sequenciamento de alto rendimento", "Rivers of bacterial community composition", "Soil Microbiology"]}, "links": [{"href": "https://eprints.lancs.ac.uk/id/eprint/82660/1/de_Carvalho_et_al_2016_raw_pdf.pdf"}, {"href": "https://doi.org/10.1002/ecy.1513"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ecy.1513", "name": "item", "description": "10.1002/ecy.1513", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ecy.1513"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-09T00:00:00Z"}}, {"id": "10.1002/ecy.1539", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:14:28Z", "type": "Journal Article", "created": "2016-07-28", "title": "Chronic Warming Stimulates Growth Of Marsh Grasses More Than Mangroves In A Coastal Wetland Ecotone", "description": "Abstract<p>Increasing temperatures and a reduction in the frequency and severity of freezing events have been linked to species distribution shifts. Across the globe, mangrove ranges are expanding toward higher latitudes, likely due to diminishing frequency of freezing events associated with climate change. Continued warming will alter coastal wetland plant dynamics both above\uffe2\uff80\uff90 and belowground, potentially altering plant capacity to keep up with sea level rise. We conducted an in situ warming experiment, in northeast Florida, to determine how increased temperature (+2\uffc2\uffb0C) influences co\uffe2\uff80\uff90occurring mangrove and salt marsh plants. Warming was achieved using passive warming with three treatment levels (ambient, shade control, warmed). Avicennia germinans, the black mangrove, exhibited no differences in growth or height due to experimental warming, but displayed a warming\uffe2\uff80\uff90induced increase in leaf production (48%). Surprisingly, Distichlis spicata, the dominant salt marsh grass, increased in biomass (53% in 2013 and 70% in 2014), density (41%) and height (18%) with warming during summer months. Warming decreased plant root mass at depth and changed abundances of anaerobic bacterial taxa. Even while the poleward shift of mangroves is clearly controlled by the occurrences of severe freezes, chronic warming between these freeze events may slow the progression of mangrove dominance within ecotones.</p>", "keywords": ["0106 biological sciences", "Time Factors", "13. Climate action", "Climate Change", "Wetlands", "Florida", "Avicennia", "14. Life underwater", "15. Life on land", "Poaceae", "Plant Roots", "01 natural sciences", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1002/ecy.1539"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ecy.1539", "name": "item", "description": "10.1002/ecy.1539", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ecy.1539"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-11-01T00:00:00Z"}}, {"id": "10.1016/j.eja.2021.126318", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:30Z", "type": "Journal Article", "created": "2021-06-05", "title": "Designing a model to investigate cropping systems aiming to control both parasitic plants and weeds", "description": "Abstract   Branched broomrape (Phelipanche ramosa (L.) Pomel) is a parasitic plant, which causes severe yield losses in major crops worldwide. Because of its broad host range, including numerous non-parasitic weed species, the persistence of its seeds in the soil, and the poor efficiency of available management techniques, broomrape management is complex. The objective of the present paper was to develop a broomrape-dynamics model to support the design of management strategies combining multiple techniques aiming at long-term control of broomrape. Towards this goal, we developed a simulation model with formalisms and parameters based on data from our own experiments and the literature. This model called  PheraSys  combines 1) a demographic submodel to predict broomrape seed bank dynamics, 2) a trophic-relationships submodel to predict the effect of parasitism on crops and weeds, and 3) a submodel of weed dynamics in agroecosystems to predict the growth of crops and weeds from cropping techniques and pedoclimate. Thanks to an individual representation of each host plant,  PheraSys  is able to simulate complex heterogeneous canopies. This model can be used as a tool to test management strategies including crop mixtures and relying on biological regulations by weeds.", "keywords": ["[SDV.SA.AGRO] Life Sciences [q-bio]/Agricultural sciences/Agronomy", "0106 biological sciences", "2. Zero hunger", "Cropping systems", "Branched broomrape", "[SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/Agronomy", "Biological regulation", "04 agricultural and veterinary sciences", "Phelipanche ramose", "15. Life on land", "Weed", "01 natural sciences", "630", "Modelling", "[SDV.BV]Life Sciences [q-bio]/Vegetal Biology", "0401 agriculture", " forestry", " and fisheries", "[SDV.BV] Life Sciences [q-bio]/Vegetal Biology", "Agroecology", "PheraSys"]}, "links": [{"href": "https://doi.org/10.1016/j.eja.2021.126318"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/European%20Journal%20of%20Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.eja.2021.126318", "name": "item", "description": "10.1016/j.eja.2021.126318", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.eja.2021.126318"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-01T00:00:00Z"}}, {"id": "10.1007/s10021-010-9363-0", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:05Z", "type": "Journal Article", "created": "2010-07-22", "title": "Effects Of Warming, Summer Drought, And Co2 Enrichment On Aboveground Biomass Production, Flowering Phenology, And Community Structure In An Upland Grassland Ecosystem", "description": "Future climate scenarios predict simultaneous changes in environmental conditions, but the impacts of multiple climate change drivers on ecosystem structure and function remain unclear. We used a novel experimental approach to examine the responses of an upland grassland ecosystem to the 2080 climate scenario predicted for the study area (3.5A degrees C temperature increase, 20% reduction in summer precipitation, atmospheric CO2 levels of 600 ppm) over three growing seasons. We also assessed whether patterns of grassland response to a combination of climate change treatments could be forecast by ecosystem responses to single climate change drivers. Effects of climate change on aboveground production showed considerable seasonal and interannual variation; April biomass increased in response to both warming and the simultaneous application of warming, summer drought, and CO2 enrichment, whereas October biomass responses were either non-significant or negative depending on the year. Negative impacts of summer drought on production were only observed in combination with a below-average rainfall regime, and showed lagged effects on spring biomass. Elevated CO2 had no significant effect on aboveground biomass during this study. Both warming and the 2080 climate change scenario were associated with a significant advance in flowering time for the dominant grass species studied. However, flowering phenology showed no significant response to either summer drought or elevated CO2. Species diversity and equitability showed no response to climate change treatments throughout this study. Overall, our data suggest that single-factor warming experiments may provide valuable information for projections of future ecosystem changes in cool temperate grasslands.", "keywords": ["free air CO2 enrichment", "0106 biological sciences", "2. Zero hunger", "interannual variation", "vegetation dynamics", "[SDV]Life Sciences [q-bio]", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "6. Clean water", "[SDV] Life Sciences [q-bio]", "climate change", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "grassland productivity", "biodiversity"]}, "links": [{"href": "https://doi.org/10.1007/s10021-010-9363-0"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecosystems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10021-010-9363-0", "name": "item", "description": "10.1007/s10021-010-9363-0", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10021-010-9363-0"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-07-23T00:00:00Z"}}, {"id": "10.1016/j.agwat.2004.04.001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:02Z", "type": "Journal Article", "created": "2004-07-06", "title": "Mechanical Control Of Shrubs In A Semiarid Region Of Argentina And Its Effect On Soil Water Content And Grassland Productivity", "description": "Abstract   Mechanical shrub control with roller choppers can be an inexpensive and non contaminant system for increasing grassland production in rangelands dry regions. A field experiment was carried out between October 1997 and October 2001 in the \u201cCaldenal-Jarillal\u201d botanic district of Argentina, a natural rangeland ecosystem with a high water deficit throughout much of the year. The trial was conducted on a Typic Ustortent and consisted of the following treatments: a control, the undisturbed natural condition (N), and rolled with (I) and without (R) interseeding of  Panicum coloratum . Results showed that I and R improved soil water content within the upper 100\u00a0cm, dry matter production of grasses, amount of litter and water use efficiency as compared to N. The positive effect of rolling on soil water content was detected only in autumn months when water balance was positive. In summer months, when a negative water balance occurred, soil water content of rolled treatments was not different from that of the unrolled one. Consumptive water use was similar in rolled and unrolled treatments, and equivalent to the rainfall, reflecting the low soil water-holding capacity. The higher efficiency of water use in rolled treatments indicated that grasses were more efficient in using the consumed water. The I and R treatments had similar values of soil water content within the upper 100\u00a0cm, grass dry matter production, amount of litter and water use efficiency. However, a higher grass dry matter production in R than in I was noticed in part of the last year of this study. Grass dry matter production increased at the same rate in all treatments after 4 years, but litter remained constant in the unrolled treatment and decreased in the rolled ones. Mechanical shrub control with a roller chopper decreased shrub competition, thereby increasing the productivity of the ecosystem.", "keywords": ["0106 biological sciences", "2. Zero hunger", "Rolling", "Natural Grasses", "04 agricultural and veterinary sciences", "Shrub Control", "15. Life on land", "01 natural sciences", "6. Clean water", "https://purl.org/becyt/ford/1.5", "0401 agriculture", " forestry", " and fisheries", "Semiarid Regions", "Water Balance", "https://purl.org/becyt/ford/1"]}, "links": [{"href": "https://doi.org/10.1016/j.agwat.2004.04.001"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20Water%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agwat.2004.04.001", "name": "item", "description": "10.1016/j.agwat.2004.04.001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agwat.2004.04.001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-08-01T00:00:00Z"}}, {"id": "10.1007/s00442-012-2484-8", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:01Z", "type": "Journal Article", "created": "2012-12-27", "title": "Herbivore Trampling As An Alternative Pathway For Explaining Differences In Nitrogen Mineralization In Moist Grasslands", "description": "Studies addressing the role of large herbivores on nitrogen cycling in grasslands have suggested that the direction of effects depends on soil fertility. Via selection for high quality plant species and input of dung and urine, large herbivores have been shown to speed up nitrogen cycling in fertile grassland soils while slowing down nitrogen cycling in unfertile soils. However, recent studies show that large herbivores can reduce nitrogen mineralization in some temperate fertile soils, but not in others. To explain this, we hypothesize that large herbivores can reduce nitrogen mineralization in loamy or clay soils through soil compaction, but not in sandy soils. Especially under wet conditions, strong compaction in clay soils can lead to periods of soil anoxia, which reduces decomposition of soil organic matter and, hence, N mineralization. In this study, we use a long-term (37-year) field experiment on a salt marsh to investigate the hypothesis that the effect of large herbivores on nitrogen mineralization depends on soil texture. Our results confirm that the presence of large herbivores decreased nitrogen mineralization rate in a clay soil, but not in a sandy soil. By comparing a hand-mown treatment with a herbivore-grazed treatment, we show that these differences can be attributed to herbivore-induced changes in soil physical properties rather than to above-ground biomass removal. On clay soil, we find that large herbivores increase the soil water-filled porosity, induce more negative soil redox potentials, reduce soil macrofauna abundance, and reduce decomposition activity. On sandy soil, we observe no changes in these variables in response to grazing. We conclude that effects of large herbivores on nitrogen mineralization cannot be understood without taking soil texture, soil moisture, and feedbacks through soil macrofauna into account.", "keywords": ["0106 biological sciences", "IMPACT", "Nitrogen", "01 natural sciences", "Soil fauna", "COMPACTION", "Soil", "SOIL PHYSICAL-PROPERTIES", "SALT-MARSH", "Large herbivores", "Soil texture", "Animals", "Biomass", "Herbivory", "Soil compaction", "Ecosystem", "2. Zero hunger", "UNGULATE", "national", "Water", "DENITRIFICATION", "Nitrogen Cycle", "15. Life on land", "N cycling", "YELLOWSTONE-NATIONAL-PARK", "PLANT-GROWTH", "13. Climate action", "ECOSYSTEM", "Clay", "Aluminum Silicates", "Soil moisture", "BAIT-LAMINA TEST"]}, "links": [{"href": "https://doi.org/10.1007/s00442-012-2484-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-012-2484-8", "name": "item", "description": "10.1007/s00442-012-2484-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-012-2484-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-12-28T00:00:00Z"}}, {"id": "10.1016/j.agwat.2018.02.001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:03Z", "type": "Journal Article", "created": "2018-03-18", "title": "Impacts of plastic film mulching on crop yields, soil water, nitrate, and organic carbon in Northwestern China: A meta-analysis", "description": "In order to increase crop yield in semi-arid and arid areas, plastic film mulching (PFM) is widely used in Northwestern China. To date, many studies have addressed the effects of PFM on soil physical and biochemical properties in rain-fed agriculture in Northwestern China, but the findings of different studies are often contradictory. Therefore, a comprehensive review of the impacts of PFM on soil water content, soil nutrients and food production is needed. We compiled the results of 1278 observations to evaluate the overall effects of PFM on soil water content, the distribution of nitrate and soil organic carbon, and crop yield in rain-fed agriculture in Northwestern China. Our results showed that PFM increased soil moisture and nitrate concentration in topsoils (0-20\u202fcm) by 12.9% and 28.2%, respectively, but slightly decreased (1.8%) soil organic carbon (SOC) content in the 0-10\u202fcm soil layer. PFM significantly increased grain yields by 43.1%, with greatest effect in spring maize (79.4%). When related to cumulative precipitation during the crop growing season, yield increase from PFM was greatest (72.8%) at 200-300\u202fmm, which was attributed to the large increase for spring maize and potato, implying that crop zoning would be beneficial for PFM in this region. When related to N application rate, crop yields benefited most from PFM (80.2%) at 200-300\u202fkg/ha. A cost-benefit analysis indicated that PFM increased economic return by an average of 29.5%, with the best improvement for spring maize (71.1%) and no increase for spring wheat. In conclusion, PFM can significantly increase crop yield and economic return (especially for spring maize) in rain-fed agriculture areas of Northwestern China. Crop zoning is recommended for PFM to achieve the largest economic benefit. However, full account needs to be taken of the environmental impacts relating to N loss, SOC depletion and film pollution to evaluate the sustainability of PFM systems and further research is required to quantify and mitigate these impacts.", "keywords": ["2. Zero hunger", "0106 biological sciences", "13. Climate action", "Plastic film mulching; Economic benefit; Grain yield; Soil water content; Nitrate", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "Article", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.agwat.2018.02.001"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20Water%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agwat.2018.02.001", "name": "item", "description": "10.1016/j.agwat.2018.02.001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agwat.2018.02.001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-04-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2010.10.001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:53Z", "type": "Journal Article", "created": "2010-10-29", "title": "Soil Properties, Crop Production And Greenhouse Gas Emissions From Organic And Inorganic Fertilizer-Based Arable Cropping Systems", "description": "Organic and conventional farming practices differ in the use of several management strategies, including use of catch crops, green manure, and fertilization, which may influence soil properties, greenhouse gas emissions and productivity of agroecosystems. An 11-yr-old field experiment on a sandy loam soil in Denmark was used to compare several crop rotations with respect to a range of physical, chemical and biological characteristics related to carbon (C) and nitrogen (N) flows. Four organic rotations and an inorganic fertilizer-based system were selected to evaluate effects of fertilizer type, catch crops, of grass-clover used as green manure, and of animal manure application. Soil was sampled from winter wheat and spring barley plots on 19 September 2007, 14 April 2008 and 22 September 2008, i.e. before, during, and after the growth season. The soils were analyzed for multiple attributes: total soil organic carbon (SOC), total N, microbial biomass N (MBN), potentially mineralizable N (PMN), and levels of potential ammonium oxidation (PAO) and denitrifying enzyme activity (DEA). In situ measurements of soil heterotrophic carbon dioxide (CO2) respiration and nitrous oxide emissions were conducted in plots with winter wheat. In April 2008, prior to field operations, intact soil cores were collected at two depths (0\u20135 and 5\u201310 cm) in plots under winter wheat. Water retention characteristics of each core were determined and used to calculate relative gas diffusivity (DP/Do). Finally, crop growth was monitored and grain yields measured at harvest maturity. The different management strategies between 1997 and 2007 led to soil carbon inputs that were on average 18\u201368% and 32\u201391% higher in the organic than inorganic fertilizer-based rotations for the sampled winter wheat and spring barley crops, respectively. Nevertheless, SOC levels in 2008 were similar across systems. The cumulative soil respiration for the period February to August 2008 ranged between 2 and 3 t CO2\u2013C ha\u22121 and was correlated (r = 0.95) with average C inputs. In the organic cropping systems, pig slurry application and inclusion of catch crops generally increased soil respiration, PMN and PAO. At field capacity, relative gas diffusivity at 0\u20135 cm depth was >50% higher in the organic than the inorganic fertilizer-based system (P < 0.05). Crop yields in 2008 were generally lower in the low-input organic rotations than in the high-input inorganic fertilizer-based system; only spring barley in rotations with pig slurry application and incorporation of a catch crop prior to sowing obtained grain yields similar to levels achieved in the system where inorganic fertilizer was applied. These results suggest that within organic cropping systems, both microbial activity and crop yields could be enhanced through inclusion of catch crops. However, the timing of catch crop incorporation is critical.", "keywords": ["2. Zero hunger", "microbial biomass", "Nutrient turnover", "inorganic fertilizer", "15. Life on land", "potential ammonium oxidation", "Air and water emissions", "6. Clean water", "12. Responsible consumption", "denitrifier enzyme activity", "Soil biology", "/dk/atira/pure/core/keywords/Life", "13. Climate action", "potential mineralizable nitrogen", "catch drop", "gas diffusivity", "11. Sustainability", "Former LIFE faculty"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2010.10.001"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2010.10.001", "name": "item", "description": "10.1016/j.agee.2010.10.001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2010.10.001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-12-01T00:00:00Z"}}, {"id": "10.1007/s10646-009-0329-y", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:16Z", "type": "Journal Article", "created": "2009-06-06", "title": "Trace Elements And Activity Of Antioxidative Enzymes In Cistus Ladanifer L. Growing On An Abandoned Mine Area", "description": "The Mediterranean shrub Cistus ladanifer grows naturally in S\u00e3o Domingos (Portugal), an abandoned copper mine. High levels of trace elements in plants can generate oxidative stress increasing the activity of antioxidant enzymes. The aim of this work was to evaluate and compare As, Cu, Pb and Zn concentrations and the activity of the soluble and cell wall ionically bounded forms of the enzymes catalase, peroxidase and superoxide dismutase in leaves of C. ladanifer, collected in spring and summer, growing on S\u00e3o Domingos mine and on a non-contaminated area (Pomar\u00e3o). S\u00e3o Domingos soils showed high total concentrations of As (2.6 g kg(-1)) and Pb (7.3 g kg(-1)) however the available fraction represented less than 1.5% of the total. C. ladanifer population from mine showed tolerance to Pb and Zn, which attain in leaves concentrations considered toxic for plants. The enzymatic activity of catalase, peroxidise and superoxide dismutase varied with plant populations and seasons, although with no particular trend, being specific to each trace element and enzyme cell localization. Catalase activity was evenly distributed between the soluble and ionically bounded forms, whereas the ionically bounded form of peroxidase predominated relatively to total activity, and the opposite was observed for superoxide dismutase. Spring and summer leaves from the two areas presented enzymatic activities in both fractions except to peroxidase soluble activities in leaves collected in summer. C. ladanifer enzymatic activity seems to be related with the co-existence of different stress factors (trace elements concentration, temperature, UV radiation and drought). The survival and growth of this species on contaminated mining soils is due to the presence of effective antioxidant enzyme-based defence systems.", "keywords": ["0106 biological sciences", "trace elements", "Industrial Waste", "antioxidative enzymes", "Antioxidative enzymes", "01 natural sciences", "Mining", "Soil", "Cell Wall", "Soil Pollutants", "adaptative capacity", "0105 earth and related environmental sciences", "Trace elements", "Portugal", "Cistus", "Adaptative capacity", "15. Life on land", "Sulphide abandoned mine", "cistus ladanifer L.", "Trace Elements", "Plant Leaves", "Oxidative Stress", "sulphide abandoned mine", "Cistus ladanifer L.", "Oxidoreductases", "Copper"]}, "links": [{"href": "https://doi.org/10.1007/s10646-009-0329-y"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecotoxicology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10646-009-0329-y", "name": "item", "description": "10.1007/s10646-009-0329-y", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10646-009-0329-y"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-06-05T00:00:00Z"}}, {"id": "10.1007/s00442-005-0249-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:00Z", "type": "Journal Article", "created": "2005-10-04", "title": "Fungal Community Composition And Metabolism Under Elevated Co2 And O-3", "description": "Atmospheric CO(2) and O(3) concentrations are increasing due to human activity and both trace gases have the potential to alter C cycling in forest ecosystems. Because soil microorganisms depend on plant litter as a source of energy for metabolism, changes in the amount or the biochemistry of plant litter produced under elevated CO(2) and O(3) could alter microbial community function and composition. Previously, we have observed that elevated CO(2) increased the microbial metabolism of cellulose and chitin, whereas elevated O(3) dampened this response. We hypothesized that this change in metabolism under CO(2) and O(3) enrichment would be accompanied by a concomitant change in fungal community composition. We tested our hypothesis at the free-air CO(2) and O(3) enrichment (FACE) experiment at Rhinelander, Wisconsin, in which Populus tremuloides, Betula papyrifera, and Acer saccharum were grown under factorial CO(2) and O(3) treatments. We employed extracellular enzyme analysis to assay microbial metabolism, phospholipid fatty acid (PLFA) analysis to determine changes in microbial community composition, and polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) to analyze the fungal community composition. The activities of 1,4-beta-glucosidase (+37%) and 1,4,-beta-N-acetylglucosaminidase (+84%) were significantly increased under elevated CO(2), whereas 1,4-beta-glucosidase activity (-25%) was significantly suppressed by elevated O(3). There was no significant main effect of elevated CO(2) or O(3) on fungal relative abundance, as measured by PLFA. We identified 39 fungal taxonomic units from soil using DGGE, and found that O(3) enrichment significantly altered fungal community composition. We conclude that fungal metabolism is altered under elevated CO(2) and O(3), and that there was a concomitant change in fungal community composition under elevated O(3). Thus, changes in plant inputs to soil under elevated CO(2) and O(3) can propagate through the microbial food web to alter the cycling of C in soil.", "keywords": ["0106 biological sciences", "Food Chain", "Extracellular Enzymes", "Science", "Ecology and Evolutionary Biology", "Polymerase Chain Reaction\u2013Denaturing Gradient Gel Electrophoresis", "Polymerase Chain Reaction", "01 natural sciences", "Soil Microbial Community", "Soil", "Ozone", "Health Sciences", "Acetylglucosaminidase", "Cellular and Developmental Biology", "Ecosystem", "Soil Microbiology", "beta-Glucosidase", "Fatty Acids", "Fungi", "Natural Resources and Environment", "Molecular", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "Fungal Metabolism", "Carbon", "Free-air CO 2 and O 3 Enrichment", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Extracellular Space"]}, "links": [{"href": "https://doi.org/10.1007/s00442-005-0249-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-005-0249-3", "name": "item", "description": "10.1007/s00442-005-0249-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-005-0249-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-10-05T00:00:00Z"}}, {"id": "10.1016/j.agee.2017.09.011", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:58Z", "type": "Journal Article", "created": "2017-09-28", "title": "Conservation Agriculture Based On Crop Rotation And Tillage In The Semi-Arid Loess Plateau, China: Effects On Crop Yield And Soil Water Use", "description": "Abstract   In the semi-arid Loess Plateau region, water stress is the main limiting factor for rainfed agriculture; thus, conservation agriculture has been proposed to address this problem in these areas. Since 2007, a middle- to long-term experiment was established in Heyang County, Shaanxi, a region typical of the Loess Plateau, to evaluate the impact of no-tillage (NT), subsoiling tillage (ST) and conventional tillage (CT) on crop yield, water use, and soil water dynamics for winter wheat (Triticum aestivum L.) continuous cropping (WWC), spring maize (Zea mays L.) continuous cropping (SMC), and spring maize-winter wheat rotation cropping (MWR) systems. The highest four-year average wheat yield amounting to 5958\u00a0kg\u00a0ha\u22121 was attained in MWR-ST, while the highest maize yield advantage averaging 772\u00a0kg\u00a0ha\u22121 was obtained in SMC-NT. There were no significant differences in evapotranspiration (ET) and soil water storage (SWS) at the sowing/harvest stage among all treatments, but the relative greater average SWS before sowing was maintained under conservation tillage practices. The highest water use efficiency (WUE) reaching 10.0\u00a0kg\u00a0ha\u22121\u00a0mm\u22121 for wheat in MWR and 20.3\u00a0kg\u00a0ha\u22121\u00a0mm\u22121 for maize in SMC was obtained under ST treatment, while the significant WUE advantage of NT compared with CT was only obtained in SMC. At key growth stages, the higher soil water content (SWC) in the 0\u2013200\u00a0cm soil profile was maintained in the conservation tillage and MWR system for wheat but in the conservation tillage and SMC system for maize. The longer-duration fallows did not produce a better effect on SWS at the sowing stage, while the reduction of soil disturbance enhanced SWS compared with CT.  In summary, tillage, cropping system, and their interaction effect produced significant effects on crop production and soil water status, and the above findings might be helpful to draft appropriate management strategies to realize optimal crop yield based on water use.", "keywords": ["0106 biological sciences", "2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "6. Clean water"], "contacts": [{"organization": "Ningning Chen, Xiaoli Wang, Qian Wang, Shulan Wang, Rui Wang, Wei Lyu, Yujiao Zhang, Lei Sun, Jun Li,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2017.09.011"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2017.09.011", "name": "item", "description": "10.1016/j.agee.2017.09.011", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2017.09.011"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-01-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2017.10.023", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:58Z", "type": "Journal Article", "created": "2017-11-07", "title": "Critical review of the impacts of grazing intensity on soil organic carbon storage and other soil quality indicators in extensively managed grasslands", "description": "Livestock grazing intensity (GI) is thought to have a major impact on soil organic carbon (SOC) storage and soil quality indicators in grassland agroecosystems. To critically investigate this, we conducted a global review and meta-analysis of 83 studies of extensive grazing, covering 164 sites across different countries and climatic zones. Unlike previous published reviews we normalized the SOC and total nitrogen (TN) data to a 30\u00a0cm depth to be compatible with IPCC guidelines. We also calculated a normalized GI and divided the data into four main groups depending on the regional climate (dry warm, DW; dry cool, DC; moist warm, MW; moist cool, MC). Our results show that taken across all climatic zones and GIs, grazing (below the carrying capacity of the systems) results in a decrease in SOC storage, although its impact on SOC is climate-dependent. When assessed for different regional climates, all GI levels increased SOC stocks under the MW climate (+7.6%) whilst there were reductions under the MC climate (-19%). Under the DW and DC climates, only the low (+5.8%) and low to medium (+16.1%) grazing intensities, respectively, were associated with increased SOC stocks. High GI significantly increased SOC for C4-dominated grassland compared to C3-dominated grassland and C3-C4 mixed grasslands. It was also associated with significant increases in TN and bulk density but had no effect on soil pH. To protect grassland soils from degradation, we recommend that GI and management practices should be optimized according to climate region and grassland type (C3, C4 or C3-C4 mixed).", "keywords": ["330", "QH301 Biology", "630", "Article", "QH301", "NE/M021327/1", "Grazing intensity", "SDG 13 - Climate Action", "grazing", "2. Zero hunger", "Soil organic carbon", "Natural Environment Research Council (NERC)", "NE/P019455/1", "04 agricultural and veterinary sciences", "15. Life on land", "Grassland", "soil organic carbon", "Grazing", "grazing intensity", "total nitrogen", "13. Climate action", "NE/M016900/1", "NE/M019713/1", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "BB/N013484/1", "grassland", "BB/N013468/1"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2017.10.023"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2017.10.023", "name": "item", "description": "10.1016/j.agee.2017.10.023", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2017.10.023"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-02-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2020.107082", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:59Z", "type": "Journal Article", "created": "2020-07-23", "title": "Crop type and within-field location as sources of intraspecific variations in the phenology and the production of floral and fruit resources by weeds", "description": "Abstract   In arable farming, weeds provide important floral and seed resources that have the potential to support the provision of ecosystem services such as pollination or pest control. Estimating the production of these weed resources in the landscape is however not trivial as large-scale surveys of weed communities are usually conducted once in the season with a timing that may not coincide with the flowering and fruiting stages of all weed species. More, intraspecific variation in the mortality and phenology of individual weed species may arise from differences in the quality of the growing environment of each plant. In this study, we monitored the phenology of 30 common weed species in the field core and the field edge of 64 commercial fields grown with 6 crop types. Our hypothesis was that the production of resources by an individual plant would be modulated by its within-field location and by the crop type where it grows. We quantified floral (proportion, starting date and duration of flowering, dry biomass at flowering as a proxy for the amount of flowers) and seed resource production (proportion and starting date of fruiting). For most species, flowering and fruiting success were higher in field edges than in field cores and were lower in cereal crops than in other crops. Weeds flowered and fruited earlier and the flowering period was longer in field edges, except those of cereal crops. Dry biomass at flowering varied with field location either way, depending on the weed species, but tended to be lower in cereal crops than in other crops. This important intraspecific phenological variability in the production of seed and/or flower or resources should be considered when evaluating the contribution of weed communities to ecosystem services. It also suggests that within an agricultural landscape, the amount, timing and duration of provision of services by weeds could be enhanced by maintaining sufficient lengths of field edges and by growing a diversity of crop types.", "keywords": ["580", "[SDE] Environmental Sciences", "0106 biological sciences", "2. Zero hunger", "pollination", "farming management", "edge", "04 agricultural and veterinary sciences", "15. Life on land", "field", "phenology", "01 natural sciences", "630", "flowering success", "[SDE]Environmental Sciences", "0401 agriculture", " forestry", " and fisheries", "pest control"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2020.107082"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2020.107082", "name": "item", "description": "10.1016/j.agee.2020.107082", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2020.107082"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-10-01T00:00:00Z"}}, {"id": "10.1016/j.fcr.2022.108579", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:41Z", "type": "Journal Article", "created": "2022-05-23", "title": "Crop yield estimation and irrigation scheduling optimization using a root-weighted soil water availability based water production function", "description": "Project Co-ordinators: Dr. Jose Alfonso G\u00f3mez Calero (Instituto de Agricultura Sostenible (IAS-CISC), Dr. Weifeng Xu (Fujian Agriculture and Forest University, FAFU). -- Trabajo desarrollado bajo la financiaci\u00f3n del proyecto \u201cSoil Hydrology research platform underpinning innovation to manage water scarcity in European and Chinese cropping Systems\u201d (773903), coordinado por Jos\u00e9 Alfonso G\u00f3mez Calero, investigador del Instituto de Agricultura Sostenible (IAS). The crop-water production function (CWPF) is widely used to quantitatively describe relationships between crop water deficit and yield, and evaluate the effects of different irrigation strategies in agro-hydrological models. In order to reasonably and reliably estimate crop yield and optimize irrigation scheduling, a novel CWPF was proposed by combining the plant water deficit index (PWDI), estimated based on root-weighted soil water availability, with a daily water sensitivity index derived from a sigmoidal cumulative function. Parameterized using data from a two-year winter wheat field lysimetric experiment conducted in the North China Plain and from a previously published two-year spring maize field drip irrigation experiment in Inner Mongolia, China, the CWPFs provided reasonable estimation of different crop yields with different water stress response characteristics under different field environments. Through coupling the genetic algorithm with the integrated simulations of soil water dynamics, PWDI and CWPF in the soil-wheat system, an optimization procedure was developed to determine PWDI threshold combinations to timely trigger irrigation according to pre-designed crop water deficit status. Crop yield and water use efficiency (WUE) of winter wheat were estimated and compared under different optimized constant and variable PWDI threshold combinations. In addition, the effects of climate change on the optimized variable PWDI threshold combinations were investigated using 38 years of historic meteorological data. The results showed that regulated deficit irrigation (RDI) with a variable threshold combination, in which the sensitivity characteristics to water deficit were considered for the crop at different growth stages, was superior to a constant threshold in enhancing crop yield and WUE. Irrespective of the number of irrigation events (1, 2, 3 or 4) during the growing season, the coefficients of variation (CV) of optimized PWDI thresholds for different combinations of irrigation sequence and events were not very large under the same kind of hydrological year (wet, normal or dry), with CV < 0.39 and a median of 0.21. When the mean (MN) of the optimized PWDI threshold combinations for different irrigation sequence and events was used to schedule RDI of winter wheat in terms of various hydrological years, up to 91% of the estimated relative yield was found to be higher than 90% of the corresponding maximum values. Therefore, the MN can be valuable in formulating rational irrigation management strategies of winter wheat to achieve relatively high yields with limited water under changing climatic conditions. This research was supported partly by National Natural Science Foundation of China (U1706211, 51790532), National Key Research and Development Program of China (2017YFE0118100), and the European Union's Horizon 2020 research and innovation programme under Project SHui, grant agreement No 773903. Peer reviewed", "keywords": ["Winter wheat", "0106 biological sciences", "2. Zero hunger", "Root-weighted plant water deficit index", "13. Climate action", "Crop-water production function", "Cumulative function of water sensitivity index", "15. Life on land", "01 natural sciences", "Regulated deficit irrigation", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.fcr.2022.108579"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Field%20Crops%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.fcr.2022.108579", "name": "item", "description": "10.1016/j.fcr.2022.108579", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.fcr.2022.108579"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-08-01T00:00:00Z"}}, {"id": "10.1016/j.agwat.2020.106585", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:04Z", "type": "Journal Article", "created": "2020-10-18", "title": "Parameterization of the AquaCrop model for simulating table grapes growth and water productivity in an arid region of Mexico.", "description": "Abstract   Currently, the AquaCrop model has been widely tested for many fruit/grain crops; root and tuber crops; leafy vegetables, or forage crops, but is restricted to annual herbaceous species, while deciduous crops have received less if no attention. In this context, this study aims to test for the first time the ability of the AquaCrop model to simulate canopy cover (CC), actual evapotranspiration (ETa), total soil water content (TWC), biomass (B) and fruit yield (FY) of table grapes vineyards (Vitis vinifera L., cvs. Perlette and Superior) at the Costa de Hermosillo, Sonora in Northwest Mexico. Observed weather and soil physical parameters, with measured crop parameters from an experiment conducted during 2005 were used to develop climate, soil and crop input files for AquaCrop and for calibrating the model. While collected data during the 2006 growing season were used to validate the model.\u00a0The model adequately simulated CC, ETa and TWC during 2005 and 2006. The Root Mean Square Error (RMSE) between observed and measured CC, ETa and TWC were 5.18%, 0.46\u00a0mm/day and 10.11\u00a0mm during 2005, and 8.82%, 0.84\u00a0mm/day and 9.1\u00a0mm during 2006, respectively. The good accuracy of simulations of CC, ETa and TWC by the model have been confirmed by additional statistical parameters like the coefficient of determination (R2), The Mean Bias Error (MBE), the Willmott\u2019s index of agreement (d) and the Nash\u2013Sutcliffe Efficiency (NSE).  For the B and FY simulations, the results showed that the model correctly reproduced the B and FY with NRMSE value of 8.8%. The estimated average value of FY (14.56\u00a0t/ha) for both seasons are in the range of the potential yield (14\u201318\u00a0t/ha) of table grapes in the irrigated Costa de Hermosillo in northwest Mexico.  After the validation of the AquaCrop model, it was used to evaluate the irrigation scheduling by the farmer as well as to assess the water productivity computed as the ratio of crop production to crop water use. The results showed that, the recommended irrigation by the model was about 547\u00a0mm and 509\u00a0mm, which it is about half of that applied by the farmer (1006\u00a0mm and 929\u00a0mm) during 2005 and 2006, respectively. This large difference, which represents approximately 54% and 57% of the irrigation supply, is lost through deep percolation and could be saved without vegetation suffering from water stress while maintaining the same yield. The high loss of water by percolation affects significantly the water productivity (WP), which decreases from 3.22 to 1.74\u00a0kg/m3 if we consider the transpiration (WPTr), and the sum of ETa and Percolation (WPETa+Pr) for WP computations, respectively. Consequently, the AquaCrop model can be used as an operational tool by decision makers and growers to improve irrigation management. This is of crucial importance in arid and semi-arid regions where water is becoming increasingly scarce.", "keywords": ["0106 biological sciences", "2. Zero hunger", "550", "Evapotranspiration", "Water productivity", "[SPI] Engineering Sciences [physics]", "Percolation", "04 agricultural and veterinary sciences", "15. Life on land", "Tablegrapes (Vitisvinifera L. cvs. Perletteand Superior)", "01 natural sciences", "630", "Irrigation scheduling", "AquaCrop", "[SPI]Engineering Sciences [physics]", "Vitisvinifera L cvs Perletteand Superior", "0401 agriculture", " forestry", " and fisheries", "Tablegrapes"]}, "links": [{"href": "https://doi.org/10.1016/j.agwat.2020.106585"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20Water%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agwat.2020.106585", "name": "item", "description": "10.1016/j.agwat.2020.106585", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agwat.2020.106585"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-02-01T00:00:00Z"}}, {"id": "10.1007/s13595-016-0547-4", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:45Z", "type": "Journal Article", "created": "2016-03-24", "title": "Effects Of Experimental Warming On Soil Respiration And Biomass In Quercus Variabilis Blume And Pinus Densiflora Sieb. Et Zucc. Seedlings", "description": "AbstractKey messageIn the open-field warming experiment using infrared heaters, 3\u00a0\u00b0C warming affected soil respiration more in the deciduousQuercus variabilisBlume plot than in the evergreenPinus densifloraSieb. et Zucc. plot, but did not affect the plant biomass in either species.ContextUnderstanding the species-specific responses of belowground carbon processes to warming is essential for the accurate prediction of forest carbon cycles in ecosystems affected by future climate change.AimsThis study aimed to investigate the effect of experimental warming on soil CO2 efflux, soil-air CO2 concentration, and plant biomass for two taxonomically different temperate tree species.MethodsExperimental warming was conducted in an open-field planted with Q. variabilis and P. densiflora seedlings. Infrared heaters increased the air temperature by 3\u00a0\u00b0C in the warmed plots compared with the air temperature in the control plots over a 2-year period.ResultsThe increase in air and soil temperature stimulated soil CO2 efflux by 29 and 22\u00a0% for the Q. variabilis and P. densiflora plots, respectively. Seasonal variation in the warming effect on soil CO2 efflux was species-specific. Soil CO2 efflux was also positively related to both soil temperature and soil water content. The soil moisture deficit decreased the difference in soil CO2 efflux between the control and warmed plots. Warming did not affect soil CO2 concentration and plant biomass in either species; however, the mean soil CO2 concentration was positively correlated with root and total biomass.ConclusionWarming increased soil CO2 efflux in both Q. variabilis and P. densiflora plots, while the increase showed remarkable seasonal variations and different magnitudes for the two species.", "keywords": ["0106 biological sciences", "soil temperature", "evergreen tree", "soil water", "Red pine", "seedling", "soil respiration", "01 natural sciences", "experimental study", "Pinus resinosa", "Climate change", "Pinus densiflora", "seasonal variation", "concentration (composition)", "Quercus variabilis", "Oriental oak", "carbon dioxide", "Soil respiration", "04 agricultural and veterinary sciences", "15. Life on land", "air temperature", "carbon flux", "[SDV] Life Sciences [q-bio]", "climate change", "13. Climate action", "coniferous tree", "phytomass", "0401 agriculture", " forestry", " and fisheries", "Experimental warming", "soil moisture", "deciduous tree"]}, "links": [{"href": "https://doi.org/10.1007/s13595-016-0547-4"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Annals%20of%20Forest%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s13595-016-0547-4", "name": "item", "description": "10.1007/s13595-016-0547-4", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s13595-016-0547-4"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-03-24T00:00:00Z"}}, {"id": "10.1016/j.jenvman.2010.05.011", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:17:04Z", "type": "Journal Article", "created": "2010-06-11", "title": "Effects Of Liming On Soil Properties And Plant Performance Of Temperate Mountainous Grasslands", "description": "The application of lime or liming materials to acid-soil grasslands might help mitigate soil acidity, a major constraint to forage productivity in many temperate mountainous grasslands. Nowadays, in these mountainous grasslands, it is essential to promote agricultural practices to increase forage yield and nutritive value while preserving biodiversity and agroecosystem functioning. Two different field experiments were conducted in the Gorbeia Natural Park, northern Spain: (i) one in a calcareous mountainous grassland (Arraba) and (ii) the other in a siliceous mountainous grassland (Kurtzegan) to study the effects of a single application of two liming products, i.e. 2429 kg lime (164.3% CaCO(3)) ha(-1) and 4734 kg calcareous sand (84.3% CaCO(3)) ha(-1), applied one month before the beginning of the sheep grazing season (May-October), on soil chemical (pH, organic C, total N, C/N ratio, %Al saturation, Olsen P, exchangeable K(+) and Ca(2+)) and biological parameters (dehydrogenase, beta-glucosidase, urease, acid phosphatase and arylsulphatase activity) as well as on botanical diversity (graminoids, forbs, shrubs) and forage yield and nutritive value (crude protein, modified acid detergent fibre, digestibility). Untreated control plots were also included in the experiment. Soil sampling was carried out at the end of the sheep grazing season (6 months after liming treatment), while botanical composition was determined one year after treatments application. Although no increase in soil pH was observed in Arraba, liming significantly increased dehydrogenase activity (an indicator of soil microbial activity) by 30.4 and 86.7% at Arraba and Kurtzegan site, respectively. Liming treatments significantly improved forage yield and nutritive value in Arraba but not in Kurtzegan. Furthermore, no differences in soil biological quality, evaluated using the 'treated-soil quality index' as proposed in this work, were observed between treated and untreated soils, and between the two different lime treatments (lime, calcareous sand). It was concluded that, in acid-soil temperate mountainous grasslands, moderate liming treatments have no negative short-term effects either on soil quality or botanical composition, while resulting in improvements in forage yield and nutritive value under some conditions.", "keywords": ["2. Zero hunger", "Oxides", "Biodiversity", "04 agricultural and veterinary sciences", "Calcium Compounds", "Hydrogen-Ion Concentration", "15. Life on land", "6. Clean water", "Soil", "Spain", "0401 agriculture", " forestry", " and fisheries", "Oxidoreductases", "Soil Microbiology", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.1016/j.jenvman.2010.05.011"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Environmental%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jenvman.2010.05.011", "name": "item", "description": "10.1016/j.jenvman.2010.05.011", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jenvman.2010.05.011"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-10-01T00:00:00Z"}}, {"id": "10.1016/j.fcr.2003.08.013", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:38Z", "type": "Journal Article", "created": "2003-11-05", "title": "Crop Yields, Soil Fertility And Phosphorus Fractions In Response To Long-Term Fertilization Under The Rice Monoculture System On A Calcareous Soil", "description": "Abstract   A 14-year field trial was conducted on a calcareous soil to evaluate the effects of continuous rice (Oryza sativa L.) cropping and fertilization on crop yield, soil fertility and phosphorus fractions. The application of N and P enhanced rice yields, while K had no yield-increasing effect because of large available soil K resource. The soil organic carbon remained at a stable level except for a decrease in the unfertilized treatment after 1988. Total N did not show clear changes with time or between treatments despite some fluctuation. The available soil K trend after 1985 as well as the comparison between treatments indicated clearly decreasing available soil K, particularly in the NP treatment. Available soil P significantly decreased in the P-omitted treatments, but remained at a stable level in the P-applied treatments with time. Of the total inorganic P (Pi), Ca phosphates (Ca-P) were the dominant Pi forms, accounting for 69\u201371%, followed by Fe phosphates (Fe-P), P occluded within Fe oxides (O-P) and then Al phosphates (Al-P). Of the Ca-P fractions, Ca2-P [CaHPO4\u00b7nH2O], Ca8-P [Ca8H2(PO4)6\u00b7nH2O] and Ca10-P [Ca10(PO4)6\u00b7(OH)2] accounted for 3.1\u20136.2, 5.8\u20136.4 and 87\u201391%, respectively. The NK treatment had significant Ca2-P depletion with time compared with the NPK treatment, and the similar trend was observed for Ca8-P despite decreasing Ca8-P with time for the two treatments. In the NK treatment, Ca2-P and Ca8-P had a good correlation with Olsen-P. The significant changes with time were not observed for Fe-P, O-P and Ca10-P. The P application caused a weak accumulation of Fe-P, O-P and Ca10-P, but had no significant effect on total Pi over time. The results suggest that (i) P application is indispensable to maintain high yields of rice under N application and (ii) there was a substantial P release from Ca2-P and Ca8-P linked to P uptake by crops. Hence, soil indigenous P supply, P transformation and the yield responses to fertilizer P application must be synthetically considered to optimize fertilization strategies for irrigated rice production on the calcareous soil at the experimental site.", "keywords": ["2. Zero hunger", "0106 biological sciences", "070300 Crop and Pasture Production", "0703 (four-digit-FOR)", "Flooding", "etc.)", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "300105 Applied Hydrology (Drainage", "Irrigation", "Quality", "01 natural sciences", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.fcr.2003.08.013"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Field%20Crops%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.fcr.2003.08.013", "name": "item", "description": "10.1016/j.fcr.2003.08.013", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.fcr.2003.08.013"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-03-01T00:00:00Z"}}, {"id": "10.1016/j.fcr.2014.07.017", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:40Z", "type": "Journal Article", "created": "2014-08-23", "title": "High-Yielding Traits Of Heavy Panicle Varieties Under Triangle Planting Geometry: A New Plant Spatial Configuration For Hybrid Rice In China", "description": "Abstract   Triangle planting geometry (TPG) is a new rice arrangement mode, whereby plants form a \u201cdense intra-hill, sparse inter-hill\u201d group structure. This allows them to have more spatial options, thus avoiding excessive infra-hill competition when compared to conventional row configurations. However, there is limited information on how TPG might affect rice production, especially for newly-bred varieties featuring a heavy panicle size (5\u00a0g panicle\u22121). This study was conducted to evaluate grain yield performance and yield component changes of heavy panicle varieties under TPG. Moreover, to identify any promising agronomy traits and population structural features that might explain the difference in yield performance as well as to probe whether the high-yielding performance of TPG is reproducible in other circumstances. In 2012, Eryou498 (a heavy panicle variety) was grown under four planting geometries (PGs) in two fields that had similar soil fertility, but that were conducted with either conventional tillage or zero-tillage systems. In 2013, two heavy panicle varieties and two medium panicle varieties (2\u20135\u00a0g panicle\u22121) were grown under three PGs in two ecological regions. Grain yield and effective panicles were significantly affected by both variety and PG. A significant interaction of PG and variety was seen on grain yield, but the high-yielding performance of TPG was consistent with all varieties. Sufficient total spikelets were the basis of achieving a high grain yield. Effective panicles predominantly attributed to total spikelets across all four experiments. Robust spikelets were crucial when grain yield was at a high level. Heavy panicle varieties and TPG showed some similar high-yielding traits. These included rapid crop growth rate (CGR) during the two weeks before full heading, plenty non-structural carbohydrate (NSC) accumulated at full heading, mass NSC output in two weeks after full heading, and high radiation use efficiency (RUE). Rice under TPG presented a more compact top three leaves as well as more stretched lower leaves when compared to other PGs. Overall, all leaves of heavy panicle varieties were more stretched than those found in medium ones. Heavy panicle varieties accumulated more nitrogen (N) in leaves from elongation to 30 days after full heading while PG showed no significant effect on leaf N concentration during the late grain-filling period. These results suggest that the high-yielding performance of TPG is reproducible in other circumstances. The combination of TPG and heavy panicle varieties is advantageous, allowing for a more efficient canopy structure for heavy panicle varieties and a more robust photosynthetic ability at late grain-filling period under TPG.", "keywords": ["2. Zero hunger", "0106 biological sciences", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "Yongjian Sun, Zhiyuan Yang, Na Li, Hui Xu, Jun Ma,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.fcr.2014.07.017"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Field%20Crops%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.fcr.2014.07.017", "name": "item", "description": "10.1016/j.fcr.2014.07.017", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.fcr.2014.07.017"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-11-01T00:00:00Z"}}, {"id": "10.3389/fenvs.2021.650155", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:21:36Z", "type": "Journal Article", "created": "2021-04-06", "title": "Effects of Microplastic Fibers on Soil Aggregation and Enzyme Activities Are Organic Matter Dependent", "description": "<p>Microplastic as an anthropogenic pollutant accumulates in terrestrial ecosystems over time, threatening soil quality and health, for example by decreasing aggregate stability. Organic matter addition is an efficient approach to promote aggregate stability, yet little is known about whether microplastic can reduce the beneficial effect of organic matter on aggregate stability. We investigated the impacts of microplastic fibers in the presence or absence of different organic materials by carrying out a soil incubation experiment. This experiment was set up as a fully factorial design containing all combinations of microplastic fibers (no microplastic fiber addition, two different types of polyester fibers, and polyacrylic) and organic matter (no organic matter addition, Medicago lupulina leaves, Plantago lanceolata leaves, wheat straw, and hemp stems). We evaluated the percentage of water-stable aggregates (WSA) and activities of four soil enzymes (\uffce\uffb2-glucosidase, \uffce\uffb2-D-celluliosidase, N-acetyl-b-glucosaminidase, phosphatase). Organic matter addition increased WSA and enzyme activities, as expected. In particular, Plantago or wheat straw addition increased WSA and enzyme activities by 224.77 or 281.65% and 298.51 or 55.45%, respectively. Microplastic fibers had no effect on WSA and enzyme activities in the soil without organic matter addition, but decreased WSA and enzyme activities by 26.20 or 37.57% and 23.85 or 26.11%, respectively, in the presence of Plantago or wheat straw. Our study shows that the effects of microplastic fibers on soil aggregation and enzyme activities are organic matter dependent. A possible reason is that Plantago and wheat straw addition stimulated soil aggregation to a greater degree, resulting in more newly formed aggregates containing microplastic, the incorporated microplastic fibers led to less stable aggregates, and decrease in enzyme activities This highlights an important aspect of the context dependency of microplastic effects in soil and on soil health. Our results also suggest risks for soil stability associated with organic matter additions, such as is common in agroecosystems, when microplastics are present.</p>", "keywords": ["2. Zero hunger", "570", "soil health", "soil aggregate stability", "500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; Biologie", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "enzyme activity", "Environmental sciences", "plastic pollution", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "GE1-350", "soil structure", "microplastic", "organic matter", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.3389/fenvs.2021.650155"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Environmental%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fenvs.2021.650155", "name": "item", "description": "10.3389/fenvs.2021.650155", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fenvs.2021.650155"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-06T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Biolog&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Biolog&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Biolog&", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Biolog&offset=50", "hreflang": "en-US"}], "numberMatched": 4975, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-05-31T01:17:26.337911Z"}