{"type": "FeatureCollection", "features": [{"id": "10.5281/zenodo.7687513", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:24:29Z", "type": "Report", "title": "Effects of a fungal invasion on soil bacteria", "description": "Presentation by F.Pinzari at The World Congress of Soil Science 2022, which took place in Glasgow from 31st July - 5th August 2022 Abstract: Effects of a fungal invasion on soil bacteria Pinzari F.1,2, Clark M.D.1, Misra R. 3, Chooneea D.3, Xu X.-M.4, Jungblut A.D.1 1Life Sciences Department, Natural History Museum, Cromwell Road, SW7 5BD London, UK 2Institute for Biological Systems, Council of National Research of Italy (CNR), Monterotondo (RM), Italy 3Core Research Laboratories, Molecular Biology, Natural History Museum, London, United Kingdom 4National Institute of Agricultural Botany, East Malling Research Station (EMR), East Malling, UK Fungal bioinoculants have a vast potential in agriculture because they can help increase crop yields and quality and reduce the application of chemicals. Their effectiveness has been widely tested (Malus\u00e0 et al., 2016). However, little is known about the effect of bioinoculants on microbial assemblages in non-rhizospheric soil. A sudden artificial introduction of a fungal species in soil could theoretically impact the biodiversity of local microbial communities and lead to changes in nutrient availability (van Elsas et al., 2012). We assessed the impact of a competitive fungal inoculum, the globally-used biofertiliser Trichoderma afroharzianum T22, on soil microcosms to understand 1) to what extent the native microbial community richness and relative abundance are influenced by a fungal strain introduced to soil; 2) whether microbial taxa are resilient to the disturbance caused by the fungus; 3) how far the bioinoculant impacts the soil microorganisms functions. We used bacterial 16S rRNA gene amplicon sequencing (Illumina) and a shotgun metagenomic analysis (Oxford Nanopore Sequencing) to analyse the microbial communities in bioreactors after seven weeks of incubation with and without the fungus. The presence of the fungus had a negative impact on the abundance of some groups of bacteria, such as the genus Pseudomonas, and it stimulated the presence of species metabolically linked to the fungus, including chitin degrading Chitinophagaceae. In conclusion, the results suggest that more than an impact on bacteria's overall biodiversity, the fungus has favoured some groups at the expense of others, even creating new food webs and trophic niches. References Malus\u00e0 E, Pinzari F, Canfora L (2016) Efficacy of Biofertilizers: Challenges to Improve Crop Production. In: D.P. Singh et al. (eds.), Microbial Inoculants in Sustainable Agricultural Productivity: Microbial Inoculants in Sustainable Agricultural Productivity, pp.17-40 Springer India doi.org/10.1007/978-81-322-2644-4_2 van Elsas JD, Chiurazzi M, Mallon CA, Elhottova D, Kristufek V, Salles JF. (2012) Microbial diversity determines the invasion of soil by a bacterial pathogen. Proc Natl Acad Sci U S A. 24;109(4):1159-64. doi: 10.1073/pnas.1109326109.", "keywords": ["2. Zero hunger", "soil", " Trichoderma", " invasion", " microbial community", " bioinoculants", " T22", "13. Climate action", "15. Life on land", "6. Clean water", "12. Responsible consumption"], "contacts": [{"organization": "Pinzari, Flavia, Jungblut, Anne D., Clark, M.D., Misra, R., Xu, X.-M., Chooneea, D.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.7687513"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.7687513", "name": "item", "description": "10.5281/zenodo.7687513", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.7687513"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-03-01T00:00:00Z"}}, {"id": "10.5281/zenodo.7695462", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:24:29Z", "type": "Report", "title": "Knowedge needs and gaps on soil and land management", "description": "Soil health is vital for many ecosystem services. The Horizon Europe (HE) Mission \u201cA Soil Deal for Europe\u201d aims to accelerate the transition to sustainable soil and land management and healthy soils through an am-bitious transdisciplinary research and innovation (R&I) programme, largely based on actor engagement, Liv-ing Labs and Lighthouses. The H2020 Soil Mission Support (SMS) project supported the implementation of the HE Mission, and aimed to improve the coordination of R&I on sustainable soil and land management. Through a co-creation process together with actors, SMS collated available knowledge, actors R&I needs and identified R&I gaps that need to be addressed for successful transition towards sustainable soil and land management.
The first step was to identify existing R&I knowledge through a keyword-based analysis of scientific literature published and peer reviewed, related to sustainable soil and land management. The literature analysis ad-dressed the full range of societal challenges, soil health objectives, land use types and knowledge domains necessary to capture the socio-ecological complexity of soil health. Covering some 15,700 scientific articles, this literature analysis represents the current peer reviewed knowledge stock on sustainable soil and land management. A textual analysis using the digital platform CorTexT was undertaken to explore the identified literature and submitted to project consortium internal experts, who analysed and processed the collected information of their respective area of expertise (Annex III). The literature analysis revealed that the societal challenges \u201creduce soil degradation\u201d and \u201cimprove disaster control\u201d have been studied extensively. Con-versely, the societal challenges \u201cmitigate land take\u201d and \u201cincrease biodiversity\u201d and the knowledge domains \u201cscience-based policy support\u201d and \u201cawareness, training & education\u201d are less discussed. Factsheets present-ing the results of the literature analysis per societal challenge were developed and can be found in Annex VIII. Note that as the key-word based literature search was limited to Scopus-indexed scientific journals, other publishing formats such as conference papers, books, book chapters, non-digitalized articles, grey literature, reports, patents, etc., may be underrepresented or not included in the used data base. The exclusive use of Scopus-indexed scientific articles provided quality insurance of the material through the publication peer-review system. Nonetheless, important documents and knowledge have been incorporated by the consor-tium experts when analysing the collected literature.
The second step was to consult actors through online workshops and surveys in order to gain a practice-oriented \u2018real-life\u2019 picture of current knowledge and R&I needs for swift implementation of sustainable soil and land management. This step was seen as complementary of the published and peer-reviewed literature.
Finally, after exploring our stocktaking of R&I from existing knowledge evidenced by literature review and the actor\u2019s knowledge needs identified from actor consultations, we identified R&I gaps. The main knowledge gaps across all Mission Objectives were of socio-economic nature: drivers and causes of land degradation, knowledge management, governance and policies for inciting improved management, and interaction with other sectors are not sufficiently understood. Second, the HE Missions\u2019 focus on improving soil literacy was supported by the literature analysis and by the actor consultation, which both revealed knowledge gaps re-lated to education and capacity building in all land use types and domains affecting soil health: production, consumption, trade, policy and governance. Thirdly, there is a gap in the long-term implementation of a new mode of knowledge co-design, where researchers and practitioners together develop solutions for sustaina-ble soil and land management in a real-world context. The HE Missions\u2019 focus on Living Labs and Lighthouses has the potential to close this gap. Finally, there is a need to define several concepts (e.g. soil health, soil degradation, footprint). Such definitions should be shared and will be a basis to identify relevant indicators and respective thresholds, and to develop guidelines to support monitoring programmes in order to translate knowledge into evidence for decision making.
The outcome of the deliverable is a list of validated R&I gaps across all Mission Objectives which will feed into the SMS roadmap and the HE Mission.", "keywords": ["2. Zero hunger", "13. Climate action", "11. Sustainability", "15. Life on land", "6. Clean water", "12. Responsible consumption"], "contacts": [{"organization": "Mason, Elo\u00efse, L\u00f6bmann, Michael, Matt, Mireille, Sharif, Ibrat, Maring, Linda, Ittner, Sophie, Bispo, Antonio,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.7695462"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.7695462", "name": "item", "description": "10.5281/zenodo.7695462", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.7695462"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-02-17T00:00:00Z"}}, {"id": "10.5281/zenodo.7695641", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:24:30Z", "type": "Report", "title": "Soil and land management ontology reference document", "description": "The Soil Mission Support (SMS) project supports the European Commission and the Mission Board of the Horizon Europe
Mission in the area of Soil Health and Food in delivering its objectives and related targets. It is assumed that the
Soil Mission and its related objectives and specific targets can only be achieved through healthy soils and for that,
stakeholder engagement is needed. Healthy soils are defined as soils that are in good chemical, biological and physical
condition and thus are able to continuously provide as many ecosystem services as possible (EC, 2021a). Stakeholders
are defined as those who are affected in their interest or concern by changes in soil and land management (Brils et al.,
2022).
With multi-stakeholder processes, language and use of language is very important. The capability to understand each
other is critical. Communication difficulties originate to a large extent from the \u2018jargon\u2019 used in the different communities.
A common language facilitates \u2018learning together\u2019 which helps to build trust, develop a common view on the issues
at stake, resolve conflicts and arrive at joint solutions that are technically sound and that can be implemented in
practice. Ontology defines a common vocabulary for those who, for example, need to converse about a common issue
or share information in a specific domain.
In first instance the shared domain of discourse was defined and then at different levels of hierarchy:
\u00b7 Primary objects of relevance for the domain of discourse were selected;
\u00b7 The inter-relational links between these objects was conceptualized (conceptual model); and
\u00b7 These objects were defined in a representational vocabulary (a common language).
The domain of discourse covers soil and land management aimed to achieve the first six (of the eight) Soil Mission
objectives, which are: 1. reduce desertification, 2. conserve soil organic carbon stocks, 3. stop soil sealing and increase
re-use of urban soils, 4. reduce soil pollution and enhance restoration, 5. prevent erosion, and 6. improve soil structure
to enhance soil biodiversity.
The first level of hierarchy covers soil and land and its use. At this level the following objects have been selected, interrelated
in a conceptual model (i.e. visual of soil and land-use) and defined in a common language: soil, land, landuse
and land-use types (including: urban, industrial, agriculture, forest, nature and protected land).
The second level of hierarchy covers soil management. At his level the following objects have been selected, interrelated
in a conceptual soil management model and defined in a common language: soil management (including: soil
management strategy, measures, program of measures), soil ecosystems (including: ecosystem services, pressures,
healthy soil ecosystems), users (stakeholders) and information.
Lastly, the third level of hierarchy covers the achievement of the first six Soil Mission objectives. At this level the
most relevant objects related to each of these objectives are selected and interrelated to their position in the DPSIR
(Drivers-Pressures-State-Impact-Response) framework which is at this 3rd level superimposed on the soil management
model as used for level 2.
The remaining two Soil Mission objectives, i.e. 7. reduce the EU global footprint on soils and 8. improve soil literacy in
society, do not directly relate to the actual management of soil and land. However, also for these mission objectives
some important objects have been selected and defined in a common language.
Experts in the SMS project \u2013 jointly covering the fields of expertise related to all the 8 Soil Mission objectives \u2013 developed
this ontology. This ontology should now be used in soil policy and management practice, such as Living Labs. In
such settings, the ontology can be improved through interaction with stakeholders from different backgrounds, further
increasing its value.
The key-recommendations are:
\u00b7 use this ontology in soil policy and management practice (e.g. Living Labs)
\u00b7 soil policy makers and managers should promote its use in such practice
\u00b7 use the feedback from stakeholders to further improve the ontology
In support of the dissemination of this document a policy brief is prepared and attached as annex in this document.
Both documents are made publicly available via de SMS website: https://www.soilmissionsupport.eu/outputs", "keywords": ["2. Zero hunger", "13. Climate action", "11. Sustainability", "15. Life on land", "12. Responsible consumption"], "contacts": [{"organization": "Nougues, Laura, Brils, Jos,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.7695641"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.7695641", "name": "item", "description": "10.5281/zenodo.7695641", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.7695641"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-02-04T00:00:00Z"}}, {"id": "10.5281/zenodo.8089699", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:24:33Z", "type": "Journal Article", "created": "2019-11-28", "title": "High-resolution and three-dimensional mapping of soil texture of China", "description": "The lack of detailed three-dimensional soil texture information largely restricts many applications in agriculture, hydrology, climate, ecology and environment. This study predicted 90 m resolution spatial variations of sand, silt and clay contents at a national extent across China and at multiple depths 0\u20135, 5\u201315, 15\u201330, 30\u201360, 60\u2013100 and 100\u2013200 cm. We used 4579 soil profiles collected from a national soil series inventory conducted recently and currently available environmental covariates. The covariates characterized environmental factors including climate, parent materials, terrain, vegetation and soil conditions. We constructed random forest models and employed a parallel computing strategy for the predictions of soil texture fractions based on its relationship with the environmental factors. Quantile regression forest was used to estimate the uncertainty of the predictions. Results showed that the predicted maps were much more accurate and detailed than the conventional linkage maps and the SoilGrids250m product, and could well represent spatial variation of soil texture across China. The relative accuracy improvement was around 245\u2013370% relative to the linkage maps and 83\u2013112% relative to the SoilGrids250m product with regard to the R2, and it was around 24\u201326% and 14\u201319% respectively with regard to the RMSE. The wide range between 5% lower and 95% upper prediction limits may suggest that there was a substantial room to improve current predictions. Besides, we found that climate and terrain factors are major controllers for spatial patterns of soil texture in China. The heat and water-driven physical and chemical weathering and wind-driven erosion processes primarily shape the pattern of clay content. The terrain, wind and water-driven deposition, erosion and transportation sorting processes of soil particles primarily shape the pattern of silt. The findings provide clues for modeling future soil evolution and for national soil security management under the background of global and regional environmental changes.", "keywords": ["2. Zero hunger", "Digital soil mapping", "13. Climate action", "Large extent", "Machine learning", "Environmental factors", "Uncertainty", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.8089699"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.8089699", "name": "item", "description": "10.5281/zenodo.8089699", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.8089699"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-01T00:00:00Z"}}, {"id": "10.5281/zenodo.8320433", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:24:36Z", "type": "Dataset", "title": "Carbon storage and carbon-equivalent albedo impact for US forests, by age and forest type", "description": "These tables document estimates of carbon storage (Mg/ha +/- Standard Error) and carbon-equivalent albedo impacts (same units) of US forests by age and forest type (Healey et al., in review). Carbon estimates are derived from field measurements made by the USDA Forest Service on approximately 125,000 forested field plots (Domke et al., 2022). Soil organic carbon is omitted from these estimates, but all other above- and below-ground pools are included. Albedo impacts (time-dependent emissions equivalent, TDEE; Bright et al., 2016) were developed by applying atmospheric kernels (Bright and O'Halloran) to a new Landsat blue sky albedo product for the Landsat archive (Erb et al., 2022), as described by Healey et al. (in review). Standard error is supplied for each age/forest type bin for carbon storage, but upper and lower standard error bounds are specified for TDEE because log transformation creates an asymmetrical uncertainty envelope. Bright, Bogren, Bernier, Astrup, (2016). Carbon-equivalent metrics for albedo changes in land management contexts: Relevance of the time dimension. Ecol. Appl. 26, 1868\u20131880 Bright, R. M., & O'Halloran, T. L. (2019). Developing a monthly radiative kernel for surface albedo change from satellite climatologies of Earth's shortwave radiation budget: CACK v1. 0. Geoscientific Model Development, 12(9), 3975-3990. Domke, Walters, Nowak, Greenfield, Smith, Nichols, Ogle, Coulston, Wirth (2022). Greenhouse Gas Emissions and Removals From Forest Land, Woodlands, Urban Trees, and Harvested Wood Products in the United States, 1990\u20132020. (US Dept. Ag. For. Service, Madison, WI; https://doi.org/10.2737/FS-RU-382). Erb, Li, Sun, Paynter, Wang, & Schaaf, (2022). Evaluation of the Landsat-8 Albedo Product across the Circumpolar Domain. Remote Sensing, 14(21), 5320. Healey, Yang, Erb, Bright, Domke, Frescino, Schaaf, (in review) New satellite observations expose albedo dynamics offsetting half of carbon storage benefits in US forests.", "keywords": ["climate change", "forest carbon", "13. Climate action", "15. Life on land", "Landsat", "albedo"], "contacts": [{"organization": "Healey, Sean, Yang, Zhiqiang,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.8320433"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.8320433", "name": "item", "description": "10.5281/zenodo.8320433", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.8320433"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-09-06T00:00:00Z"}}, {"id": "10.6084/m9.figshare.19498606", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:25:09Z", "type": "Report", "created": "2022-04-02", "title": "Additional file 1 of Rhizosheath\u2013root system changes exopolysaccharide content but stabilizes bacterial community across contrasting seasons in a desert environment", "description": "Additional file 1. Result S1. Analysis of rhizosheath sand composition. Result S2. Analysis of cultivable bacteria. Table S1. Climatic conditions throughout the year in Ksar Ghilane, Sahara Desert (Tunisia); data elaborated from https://www.worldweatheronline.com ; data as reported as monthly average measurement from January 2019 to now. Table S2. List of FISH probes used and conditions applied; probe sequence (5\u2019-3\u2019), attached fluorochrome (fluor.), bacterial target group, percentage of formaldehyde (FA) used during treatment, and references are also reported. Table S3. Number of KTUs and sequences used for each sample. RH: rhizosphere, RS: rhizosheath, RT: root tissue, BS: bulk sand. Table S4. Humidity (RH%) and temperature (T\u00b0C) measured in summer (June, 2016) and winter (November, 2016) for bulk sand and belowground speargrasses (i.e., plant rhizosheath\u2013root system, RS). Table S5. Physico-chemical analyses conducted on bulk sand (BS) and rhizosheath matrix (RS) collected in summer (S) and winter (W). Table S6. PERMANOVA pair-wise comparison test of physico-chemical conditions (Table S5) in rhizosheath (RS) and bulk sand (BS) collected during summer (S) and winter (W) seasons. Table S7. Multivariate test (pairwise comparison) of beta-diversity associated with root tissue, rhizosheath, rhizosphere, and bulk sand. Table S8. Mean and standard error of multivariate dispersions from centroid calculated for each compartment (within-betadiversity). Table S9. Relative importance of different ecological processes in the assembly of bacterial community associated with the rhizosheath-root system compartments and bulk sand in two contrasting seasons. Table S10. Generalized linear model univariate test indicates the KTUs contributing to the difference in bulk soil among summer and winter. Table S11. Tukey\u2019s honest significance difference (TukeyHSD) pairwise comparison tests for the degree, betweenness and keystone species detected across the four co-occurrence networks, namely bulk sand winter, bulk sand winter summer, rhizosheath\u2013root system winter and rhizosheath\u2013root system summer. Table S12. List of bacterial isolates, PGP activity, and abiotic resistance tested in vitro. Figure S1. Stipagrostis pungens rhizosheath-root system. Figure S2. Rarefaction curves of bacterial reads obtained by pair-ends MiSeq Illumina sequencing in bulk sand, rhizosheath, rhizosphere, and root tissues. Figure S3. Visualization of Stipagrostis pungens rhizosheath with scanning electron microscopy (SEM). Figure S4. SEM images and electron micrographs of the sand grains and root tissue within the rhizosheath of Stipagrostis pungens using environmental scanning electron microscopy (ESEM) to reveal chemical composition. Figure S5. Localization of bacteria in rhizosheath-root system by confocal laser-scanning microscopy (CLSM) and fluorescence in situ hybridization (FISH). Figure S6. Bacterial KTUs distribution across samples. Figure S7. Venn diagram shows the distribution of bacterial KTUs across compartment categories. Figure S8. Alpha diversity expressed as richness (number of KTUs) and Shannon diversity across the compartment categories. Figure S9. Quantification of betadiversity components in bulk sand bacterial communities across seasons (summer and winter). Figure S10. Alpha diversity expressed as richness (number of KTUs) and Shannon diversity across the compartments in summer and winter. Figure S11. Venn diagrams showing the number of KTUs present in summer and/or in winter in each compartment category. Figure S12. Analysis of 2-fold change was performed to evaluate the KTUs that had a significantly (p < 0.01) different relative abundance (2-fold change) over summer and winter. Figure S13. Taxonomy of co-occurrence network degrees in bulk sand and rhizosheath matrix across seasons. Figure S14. Microcosms to evaluate sand wettability in vitro. Evaluation of sand weight at 48 h and along the entire incubation (0, 24 and 48 h).", "keywords": ["2. Zero hunger", "13. Climate action", "15. Life on land", "6. Clean water"], "contacts": [{"organization": "Marasco, Ramona, Fusi, Marco, Mosqueira, Maria, Booth, Jenny Marie, Rossi, Federico, Cardinale, Massimiliano, Michoud, Gr\u00e9goire, Rolli, Eleonora, Mugnai, Gianmarco, Vergani, Lorenzo, Borin, Sara, De Philippis, Roberto, Cherif, Ameur, Daffonchio, Daniele,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.6084/m9.figshare.19498606"}, {"rel": "self", "type": "application/geo+json", "title": "10.6084/m9.figshare.19498606", "name": "item", "description": "10.6084/m9.figshare.19498606", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.6084/m9.figshare.19498606"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "11567/1075584", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:25:53Z", "type": "Report", "title": "Assessment of toxicity of particulate matter in the sub-micrometric range by an Atmospheric Simulation Chamber", "description": "Atmospheric aerosols (or Particulate Matter, PM) play an important role in human health and global climate changes, being a central topic in atmospheric physics and chemistry. PM consists of solid and liquid particles suspended in the atmosphere, with high variability in size, composition, concentration, shape, life-time and sources. Among PM constituents, carbonaceous compounds cover a substantial fraction. My thesis focuses on soot particles that are carbonaceous particles generated as by-products of incomplete combustion of hydrocarbon fuels. Soot particles are responsible of negative impacts, both on climate and health. Therefore, it is necessary to investigate their properties and behaviour in the atmosphere in order to fully understand their adverse effects. Aerosols properties can be investigated by experiments performed in Atmospheric Simulation Chambers (ASCs), which are exploratory platforms that allow to study atmospheric processes under realistic but controlled conditions, for long enough time periods to reproduce realistic environments. My PhD took place in the Laboratory for Environmental Physics at the Physics Department of the University of Genoa, where the only Italian ASC, ChAMBRe, is installed. The employ of a soot generator is useful to perform experiments concerning soot particles. They are stable source that generate particles with controlled and known properties, similar to the real atmospheric ones. During my PhD, the Mini-Inverted Soot Generator (MISG) was used, fuelled with both ethylene and propane and varying the oxygen-fuel ratio. The main objective of this thesis was to develop an experimental setup and a procedure that allow to perform systematic studies on soot particles exposed and maintained in different conditions thus investigating their properties, effects and interactions with the other atmospheric pollutants. Combustion conditions and resulting flame shapes were classified; a deep characterization of MISG exhaust, in connection to ChAMBRe, was performed in terms of concentration of emitted particles and gases, particle size distribution, composition and optical properties. The characterization of the MISG exhausts is an important piece of information to design the subsequent experiments. Well-characterized soot particles could be used to investigate the effects that atmospheric parameters can have on soot particles, and to study the interactions between soot particles and other pollutants. During my PhD work, preliminary studies on the soot oxidative potential and toxicological effects as well on interactions between soot particles and bio-aerosols were performed.", "keywords": ["13. Climate action", "11. Sustainability", "atmospheric simulation chamber", " soot particle", " soot generator", "7. Clean energy"], "contacts": [{"organization": "VERNOCCHI, VIRGINIA", "roles": ["creator"]}]}, "links": [{"href": "https://iris.unige.it/bitstream/11567/1075584/4/phdunige_4709983.pdf"}, {"href": "https://doi.org/11567/1075584"}, {"rel": "self", "type": "application/geo+json", "title": "11567/1075584", "name": "item", "description": "11567/1075584", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11567/1075584"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-04-13T00:00:00Z"}}, {"id": "1854/LU-8732814", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:26:06Z", "type": "Journal Article", "created": "2021-11-09", "title": "Litter quality, mycorrhizal association, and soil properties regulate effects of tree species on the soil fauna community", "description": "Abstract Forest management, including selection of appropriate tree species to mitigate climate change and sustain biodiversity, requires a better understanding of factors that affect the composition of soil fauna communities. These communities are an integral part of the soil ecosystem and play an essential role in forest ecosystem functioning related to carbon and nitrogen cycling. Here, by performing a field study across six common gardens in Denmark, we evaluated the effects of tree species identity and mycorrhizal association (i.e., arbuscular mycorrhiza (AM) and ectomycorrhiza (ECM)) on soil fauna (meso- and macrofauna) taxonomic and functional community composition by using diversity, abundance, and biomass as proxies. We found that (1) tree species identity and mycorrhizal association both showed significant effects on soil fauna communities, but the separation between community characteristics in AM and ECM tree species was not entirely consistent; (2) total soil fauna abundance, biomass, as well as taxonomic and functional diversity were generally significantly higher under AM tree species, as well as lime, with higher litter quality (high N and base cation and low lignin:N ratio); (3) tree species significantly influenced the properties of litter, forest floor, and soil, among which litter and/or forest floor N, P, Ca, and Mg concentrations, soil pH, and soil moisture predominantly affected soil fauna abundance, biomass, and taxonomic and functional diversity. Our results from this multisite common garden experiment provide strong and consistent evidence of positive effects of tree species with higher litter quality on soil fauna communities in general, which helps to better understand the effects of tree species selection on soil biodiversity and its functions related to forest soil carbon sequestration.", "keywords": ["DECOMPOSITION", "EARTHWORMS", "Diversity", "PH", "FOREST FLOOR", "Common garden experiment", "Soil meso- and macrofauna", "DIVERSITY", "Biology and Life Sciences", "04 agricultural and veterinary sciences", "15. Life on land", "NITROGEN", "CARBON", "Taxonomic group", "FUNCTIONAL TRAITS", "Abundance", "13. Climate action", "Earth and Environmental Sciences", "Functional group", "0401 agriculture", " forestry", " and fisheries", "BIODIVERSITY", "ABUNDANCE", "Biomass"]}, "links": [{"href": "https://doi.org/1854/LU-8732814"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1854/LU-8732814", "name": "item", "description": "1854/LU-8732814", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1854/LU-8732814"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-01T00:00:00Z"}}, {"id": "1871.1/bbc7e25d-d1b9-4c7d-baa4-1a09012f06b2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:26:08Z", "type": "Journal Article", "created": "2022-11-21", "title": "Global biomass burning fuel consumption and emissions at 500\u2009m spatial resolution based on the Global Fire Emissions Database (GFED)", "description": "

Abstract. In fire emission models, the spatial resolution of both the modelling framework and the satellite data used to quantify burned area can have considerable impact on emission estimates. Consideration of this sensitivity is especially important in areas with heterogeneous land cover and fire regimes and when constraining model output with field measurements. We developed a global fire emissions model with a spatial resolution of 500\u2009m using MODerate resolution Imaging Spectroradiometer (MODIS) data. To accommodate this spatial resolution, our model is based on a simplified version of the Global Fire Emissions Database (GFED) modelling framework. Tree mortality as a result of fire, i.e.\u00a0fire-related forest loss, was modelled based on the overlap between 30\u2009m forest loss data and MODIS burned area and active fire detections. Using this new 500\u2009m model, we calculated global average carbon emissions from fire of 2.1\u00b10.2 (\u00b11\u03c3 interannual variability, IAV)\u2009Pg\u2009C\u2009yr\u22121 during 2002\u20132020. Fire-related forest loss accounted for 2.6\u00b10.7\u2009% (uncertainty range =1.9\u2009%\u20133.3\u2009%) of global burned area and 24\u00b16\u2009% (uncertainty range =16\u2009%\u201331\u2009%) of emissions, indicating that fuel consumption in forest fires is an order of magnitude higher than the global average. Emissions from the combustion of soil organic carbon (SOC) in the boreal region and tropical peatlands accounted for 13\u00b14\u2009% of global emissions. Our global fire emissions estimate was higher than the 1.5\u2009Pg\u2009C\u2009yr\u22121 from GFED4 and similar to 2.1\u2009Pg\u2009C\u2009yr\u22121 from GFED4s. Even though GFED4s included more burned area by accounting for small fires undetected by the MODIS burned area mapping algorithm, our emissions were similar to GFED4s due to higher average fuel consumption. The global difference in fuel consumption could mainly be explained by higher SOC emissions from the boreal region as constrained by additional measurements. The higher resolution of the 500\u2009m model also contributed to the difference by improving the simulation of landscape heterogeneity and reducing the scale mismatch in comparing field measurements to model grid cell averages during model calibration. Furthermore, the fire-related forest loss algorithm introduced in our model led to more accurate and widespread estimation of high-fuel-consumption burned area. Recent advances in burned area detection at resolutions of 30\u2009m and finer show a substantial amount of burned area that remains undetected with 500\u2009m sensors, suggesting that global carbon emissions from fire are likely higher than our 500\u2009m estimates. The ability to model fire emissions at 500\u2009m resolution provides a framework for further improvements with the development of new satellite-based estimates of fuels, burned area, and fire behaviour, for use in the next generation of GFED.

", "keywords": ["QE1-996.5", "13. Climate action", "11. Sustainability", "Geology", "15. Life on land", "7. Clean energy", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/1871.1/bbc7e25d-d1b9-4c7d-baa4-1a09012f06b2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoscientific%20Model%20Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1871.1/bbc7e25d-d1b9-4c7d-baa4-1a09012f06b2", "name": "item", "description": "1871.1/bbc7e25d-d1b9-4c7d-baa4-1a09012f06b2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1871.1/bbc7e25d-d1b9-4c7d-baa4-1a09012f06b2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-30T00:00:00Z"}}, {"id": "1887/4246123", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:26:09Z", "type": "Journal Article", "created": "2023-08-30", "title": "Inland Waters Increasingly Produce and Emit Nitrous Oxide", "description": "Nitrous oxide (N2O) is a long-lived greenhouse gas and currently contributes \u223c10% to global greenhouse warming. Studies have suggested that inland waters are a large and growing global N2O source, but whether, how, where, when, and why inland-water N2O emissions changed in the Anthropocene remains unclear. Here, we quantify global N2O formation, transport, and emission along the aquatic continuum and their changes using a spatially explicit, mechanistic, coupled biogeochemistry-hydrology model. The global inland-water N2O emission increased from 0.4 to 1.3 Tg N yr-1 during 1900-2010 due to (1) growing N2O inputs mainly from groundwater and (2) increased inland-water N2O production, largely in reservoirs. Inland waters currently contribute 7 (5-10)% to global total N2O emissions. The highest inland-water N2O emissions are typically in and downstream of reservoirs and areas with high population density and intensive agricultural activities in eastern and southern Asia, southeastern North America, and Europe. The expected continuing excessive use of nutrients, dam construction, and development of suboxic conditions in aging reservoirs imply persisting high inland-water N2O emissions.", "keywords": ["Inland waters", "N2O cycling", " long-term temporal changes", "long-term temporal changes", "Nitrous oxide", "Asia", " Southern", "Nitrous Oxide", "Integrated process-based modeling", "Water", "Agriculture", "General Chemistry", "15. Life on land", "N2O cycling", "6. Clean water", "Greenhouse gas emission", "13. Climate action", "Environmental Chemistry", "14. Life underwater", "Spatial distributions", "closed N2O budget"]}, "links": [{"href": "https://doi.org/1887/4246123"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20%26amp%3B%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1887/4246123", "name": "item", "description": "1887/4246123", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1887/4246123"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-08-30T00:00:00Z"}}, {"id": "1959.7/uws:75008", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:26:13Z", "type": "Journal Article", "created": "2023-10-04", "title": "Plant footprint decreases the functional diversity of molecules in topsoil organic matter after millions of years of ecosystem development", "description": "AbstractAim

Theory suggests that the diversity of molecules in soil organic matter (SOM functional diversity) provides key insights on multiple ecosystem services. We aimed to investigate how and why SOM functional diversity and composition change as topsoils develop, and its implications for key soil functions (e.g., from nutrient pool to water regulation).

Location

We reported data on 16 soil chronosequences globally distributed in nine countries from six continents.

Time Period

2016\uffe2\uff80\uff932017.

Major Taxa Studied

Soil microbes (bacteria and fungi) and vascular plants.

Methods

SOM functional diversity and composition without mineral interference were measured using diffuse reflectance mid\uffe2\uff80\uff90infrared Fourier transform spectroscopy (DRIFT). We aimed to characterize the main environmental factors related to SOM functional diversity and composition. Also, we calculated the links among SOM functional diversity and key soil functions.

Results

We found that SOM functional diversity declines after millions of years of soil formation (pedogenesis). We further showed that increases in plant cover and productivity led to a higher ratio of reduced (e.g., alkanes) over oxidized carbon forms (i.e., C: O\uffe2\uff80\uff90functional groups ratio), which was positively correlated to SOM functional diversity as soils age. Our findings indicated that the plant footprint (i.e., the accumulation of plant\uffe2\uff80\uff90derived material promoting the C: O\uffe2\uff80\uff90functional group ratio) would explain the reduction of SOM functional diversity as ecosystems develop. Moreover, the dissimilarity in SOM composition consistently increased with soil age, with the soil development stage emerging as the main predictor of SOM dissimilarity across contrasting biomes.

Main Conclusions

Our global survey contextualized the natural history of SOM functional diversity and composition during long\uffe2\uff80\uff90term soil development. Together, we showed how plant footprint drives the losses of SOM functional diversity with increasing age, which might provide a novel mechanism to explain typically reported losses in ecosystem functions during ecosystem retrogression.Proper assessment of environmental quality or degradation requires knowledge of how terrestrial C pools respond to land use change. Forest plantations offer a considerable potential to sequester C in aboveground biomass. However, their impact on initial levels of soil organic carbon (SOC) varies from strong losses to gains, possibly affecting C balances in afforestation or reforestation initiatives. We compiled paired\uffe2\uff80\uff90plot studies on how SOC stocks under native vegetation change after planting fast\uffe2\uff80\uff90growth Eucalyptus species in Brazil, where these plantations are becoming increasingly important. SOC changes for the 0\uffe2\uff80\uff9320 and 0\uffe2\uff80\uff9340\uffe2\uff80\uff89cm depths varied between \uffe2\uff88\uff9225 and 42\uffe2\uff80\uff89Mg\uffe2\uff80\uff89ha\uffe2\uff88\uff921, following a normal distribution centered near zero. After replacing native vegetation by Eucalyptus plantations, mean SOC changes were \uffe2\uff88\uff921\uffc2\uffb75 and 0\uffc2\uffb73\uffe2\uff80\uff89Mg\uffe2\uff80\uff89ha\uffe2\uff88\uff921 for the 0\uffe2\uff80\uff9320 and 0\uffe2\uff80\uff9340\uffe2\uff80\uff89cm depths, respectively. These are very low figures in comparison to C stocks usually sequestered in aboveground biomass and were statistically nonsignificant as demonstrated by a t\uffe2\uff80\uff90test at p\uffe2\uff80\uff89<\uffe2\uff80\uff890\uffc2\uffb705. Similar low, nonsignificant SOC changes were estimated after data were stratified into first or second rotation cycles, soil texture and biome (savanna, rainforest or grassland). Although strong SOC losses or gains effectively occurred in some cases, their underpinning causes could not be generally identified in the present work and must be ascribed in a case basis, considering the full set of environmental and management conditions. We conclude that Eucalyptus spp. plantations in average have no net effect on SOC stocks in Brazil. Copyright \uffc2\uffa9 2012 John Wiley & Sons, Ltd.

", "keywords": ["Soil organic matter", "Carbon stocks", "Tropical soils", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Fast-growth tree plantations", "Land use change"]}, "links": [{"href": "https://doi.org/10.1002/ldr.2158"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Land%20Degradation%20%26amp%3B%20Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ldr.2158", "name": "item", "description": "10.1002/ldr.2158", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ldr.2158"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-04-03T00:00:00Z"}}, {"id": "2950304570", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:26:56Z", "type": "Journal Article", "created": "2019-06-21", "title": "Novel tetrahedral Ag3PO4@N-rGO for photocatalytic detoxification of sulfamethoxazole: Process optimization, transformation pathways and biotoxicity assessment", "description": "Abstract Global spreading of antibiotic resistant microorganisms and genes calls for the development of effective strategy to eliminate antibiotic pollution from the environment. Tetrahedral silver phosphate (Ag3PO4) is one of the master visible light photocatalysts but encountered the drawback of low stability due to photocorrosion. Integration of Ag3PO4 with N-doped reduced graphene oxide (N-rGO) that has large specific surface area, ample functional groups and hetero atoms doping is anticipated to overcome the problem. Thus, the present study prepared high stability Ag3PO4@N-rGO hybrid catalysts and applied for detoxification of sulfamethoxazole (SMX). Further, the operational parameters towards the photocatalytic degradation was systematically optimized to maximize the efficiency through response surface methodology (RSM) based on central composite design (CCD). The parameters that influenced the SMX degradation efficiency was as follows: pH\u202f>\u202fN-content\u202f>\u202fcatalyst dosage. Under the optimal conditions (catalyst dosage\u202f=\u202f0.2\u202fg/L, pH\u202f=\u202f5.8, and N-content\u2009of 5.14%), 93.8% of SMX degradation was obtained within 60\u202fmin. The plausible degradation products generation during the photocatalytic degradation of SMX was analyzed by LC-ESI/MS and the degradation pathway was proposed. In addition, the toxicity of the degradation products was investigated through Escherichia coli colony forming unit assay and a substantial biotoxicity reduction by this photodegradation was observed.", "keywords": ["13. Climate action", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/2950304570"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Chemical%20Engineering%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "2950304570", "name": "item", "description": "2950304570", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/2950304570"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-11-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2004.04.001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:16:04Z", "type": "Journal Article", "created": "2004-08-26", "title": "Carbon Sequestration In Tropical And Temperate Agroforestry Systems: A Review With Examples From Costa Rica And Southern Canada", "description": "Deforestation in the tropics, and fossil fuel burning in temperate regions contribute to the largest flux of CO 2 to the atmosphere. Therefore, land-use systems that increase the soil organic matter (SOM) pool and stabilize soil organic carbon (SOC) need to be implemented. Agroforestry systems have the potential to sequester atmospheric carbon (C) in trees and soil while maintaining sustainable productivity. The potential to sequester C in agroforestry systems in tropical and temperate regions is promising, but little information is available to date. The objective of this paper is to give an overview of the history of agroforestry and to outline differences in management practices between tropical and temperate systems. This review focuses on C inputs, SOC pools and SOC stabilization with highlights from Costa Rican and Canadian systems, and their role in C sequestration and trading. The potential to sequester C in aboveground components in agroforestry systems is estimated to be 2.1 \u00d7 10 9 Mg C year \u22121 in tropical and 1.9 \u00d7 10 9 Mg C year \u22121 in temperate biomes. However, the type of agroforestry systems and their capacity to sequester C vary globally. For example, alley cropping is an agroforestry practice where trees are integrated with crops, therefore storing C in the woody components of the trees and in the soil, with a continual addition of organic material from tree prunings and crop residues. Studies from Costa Rica have shown that a 10-year-old system with E. poeppigianasequestered C at a rate of 0.4 Mg C ha \u22121 year \u22121 in coarse roots and 0.3 Mg C ha \u22121 year \u22121 in tree trunks. Tree branches and leaves are added to the soil as mulch, contributing 1.4 Mg C ha \u22121 year \u22121 in addition to 3.0 Mg ha \u22121 year \u22121 from crop residues. This resulted in an annual increase of the SOC pool by 0.6 Mg ha \u22121 year \u22121 . Despite the two crop rotations in tropical agroforests, C input from crop residues is similar between the two biomes. The total organic matter input, however, is still greater in tropical systems due to the larger addition from tree prunings. This greater input does not necessarily increase the SOC pool significantly when compared to a temperate system of similar age as a result of faster turnover rates of the SOM pool. \u00a9 2004 Elsevier B.V. All rights reserved.", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2004.04.001"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2004.04.001", "name": "item", "description": "10.1016/j.agee.2004.04.001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2004.04.001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-12-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2005.09.013", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:16:05Z", "type": "Journal Article", "created": "2005-11-18", "title": "Responses Of Soil Microbial Biomass And N Availability To Transition Strategies From Conventional To Organic Farming Systems", "description": "Abstract Organic farming can enhance soil biodiversity, alleviate environmental concerns and improve food safety through eliminating the applications of synthetic chemicals. However, yield reduction due to nutrient limitation and pest incidence in the early stages of transition from conventional to organic systems is a major concern for organic farmers, and is thus a barrier to implementing the practice of organic farming. Therefore, identifying transition strategies that minimize yield loss is critical for facilitating the implementation of organic practices. Soil microorganisms play a dominant role in nutrient cycling and pest control in organic farming systems, and their responses to changes in soil management practices may critically impact crop growth and yield. Here we examined soil microbial biomass and N supply in response to several strategies for transitioning from conventional to organic farming systems in a long-term field experiment in Goldsboro, NC, USA. The transitional strategies included one fully organic strategy (ORG) and four reduced-input strategies (withdrawal of each or gradual reduction of major conventional inputs\u2014synthetic fertilizers, pesticides (insecticides/fungicides), and herbicides), with a conventional practice (CNV) serving as a control. Microbial biomass and respiration rate were more sensitive to changes in soil management practices than total C and N. In the first 2 years, the ORG was most effective in enhancing soil microbial biomass C and N among the transition strategies, but was accompanied with high yield losses. By the third year, soil microbial biomass C and N in the reduced-input transition strategies were statistically significantly greater than those in the CNV (averaging 32 and 35% higher, respectively), although they were slightly lower than those in the ORG (averaging 13 and 17% lower, respectively). Soil microbial respiration rate and net N mineralization in all transitional systems were statistically significantly higher than those in the CNV (averagely 83 and 66% greater, respectively), with no differences among the various transition strategies. These findings suggest that the transitional strategies that partially or gradually reduce conventional inputs can serve as alternatives that could potentially minimize economic hardships as well as benefit microbial growth during the early stages of transition to organic farming systems.", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2005.09.013"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2005.09.013", "name": "item", "description": "10.1016/j.agee.2005.09.013", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2005.09.013"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2006-04-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2006.01.008", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:16:05Z", "type": "Journal Article", "created": "2006-03-14", "title": "Promising Indicators For Assessment Of Agroecosystems Alteration Among Natural, Reforested And Agricultural Land Use In Southern Brazil", "description": "Microbiological soil-quality indicators, especially related to C and N cycles, and microbial diversity may be useful tools to determine whether a particular environment responds to an imposed management or reclamation strategy. External influences such as forest clearance and soil management affect biological indicators making them useful to point out whether the land use strategy is sustainable. Accordingly, the aim of this work was to assess the utility of some soil chemical and microbiological properties and 16S rDNA diversity in bacteria domain and their significance as soil-quality indicators in different land use systems in southern Brazil, Parana State. Nine sites with soil originated from basalt (Rhodic Ferralsol), previously covered with the Atlantic native forest were evaluated: a native forest tract as reference; three sites artificially reforested with native species, but with understory differently managed; secondary forest naturally regenerated from abandoned pasture; artificially reforested with eucalyptus; two wheat-cropped sites at differing vegetative stages; one site in fallow. Twenty-four chemical and microbiological properties and their derivatives were assessed, in addition to molecular diversity of bacteria domain based on denaturating gradient gel electrophoresis (DGGE) analysis. Amongst all variables, the most dissimilar along the sites were total organic C, microbial biomass C and N, and ammonification rate. Total organic C was highest in the native forest, followed by secondary forest, eucalyptus and the artificially reforested sites; the wheat-cropped and fallow sites produced the lowest values. This trend was also observed for ammonification rate, which was closely correlated to organic C. Microbial biomass C and N were also higher in the reforested sites, whereas for microbial N biomass, the eucalyptus site resembled to the wheat-cropped and fallow sites. The DGGE analysis revealed that the fallow, eucalyptus and wheat-cropped sites had less bacterial diversity. All the sites reforested with native species grouped with the native forest, while the eucalyptus, fallow and wheat-cropped sites formed separate clusters. A similar clustering pattern was observed when all chemical and microbiological properties were considered in a grouping analysis. The results for reforestation employing native species tended to be similar to those of the stable native forest, while the use of an exotic species (eucalyptus) tended to be similar to those of the cropped sites. In addition, the fallow site showed general unfavorable trends in microbiological indicators and less bacterial diversity, suggesting that such soil management is not sustainable at least in subtropical areas. In this case, would be preferable provide the soil with vegetal covering that increase the organic C inputs and consequently microbial diversity and activity.", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2006.01.008"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2006.01.008", "name": "item", "description": "10.1016/j.agee.2006.01.008", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2006.01.008"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2006-07-01T00:00:00Z"}}, {"id": "10.1002/2017jg004269", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:14:50Z", "type": "Journal Article", "created": "2017-12-18", "title": "Soil Carbon Dynamics in Soybean Cropland and Forests in Mato Grosso, Brazil", "description": "Abstract

Climate and land use models predict that tropical deforestation and conversion to cropland will produce a large flux of soil carbon (C) to the atmosphere from accelerated decomposition of soil organic matter (SOM). However, the C flux from the deep tropical soils on which most intensive crop agriculture is now expanding remains poorly constrained. To quantify the effect of intensive agriculture on tropical soil C, we compared C stocks, radiocarbon, and stable C isotopes to 2\uffc2\uffa0m depth from forests and soybean cropland created from former pasture in Mato Grosso, Brazil. We hypothesized that soil disturbance, higher soil temperatures (+2\uffc2\uffb0C), and lower OM inputs from soybeans would increase soil C turnover and deplete C stocks relative to nearby forest soils. However, we found reduced C concentrations and stocks only in surface soils (0\uffe2\uff80\uff9310\uffc2\uffa0cm) of soybean cropland compared with forests, and these differences could be explained by soil mixing during plowing. The amount and \uffce\uff9414C of respired CO2 to 50\uffc2\uffa0cm depth were significantly lower from soybean soils, yet CO2 production at 2\uffc2\uffa0m deep was low in both forest and soybean soils. Mean surface soil \uffce\uffb413C decreased by 0.5\uffe2\uff80\uffb0 between 2009 and 2013 in soybean cropland, suggesting low OM inputs from soybeans. Together these findings suggest the following: (1) soil C is relatively resistant to changes in land use and (2) conversion to cropland caused a small, measurable reduction in the fast\uffe2\uff80\uff90cycling C pool through reduced OM inputs, mobilization of older C from soil mixing, and/or destabilization of SOM in surface soils.This study explores a novel approach that combines soil recovery with biofuel production, presenting a strategy that addresses the increasing demand for biofuels while sidestepping the food\uffe2\uff80\uff93fuel debate. It also introduces an innovative method for recovering heavy metals from soils through their translocation into the solid product of the conversion process. Phytoremediation trials were conducted under real field conditions, and the thermochemical conversion of the harvested biomass was carried out at lab scale. Field trials took place in 2021\uffe2\uff80\uff932023 in Lithuania and Serbia. In Serbia, the contamination primarily involved heavy metals, whereas the Lithuanian site was predominantly contaminated with hydrocarbons from petroleum products. The harvested biomass underwent pretreatment and was then used as feedstock for conversion into high\uffe2\uff80\uff90energy carriers. The conversion products were evaluated for their potential to substitute fossil fuels. Finally, the value chain, encompassing key stakeholders and factors impacting the profitability of this approach, was established, and initial estimates were made regarding the size of individual cost components.\u00a050\u00a0\u03bcm, the first method showed a higher MP abundance, namely 418-2571 MP m-3 with MP mass estimates of 703-1900\u00a0\u03bcg\u00a0m-3, while the second method yielded 16.7-72.1 MP m-3 with mass estimates of 222-439\u00a0\u03bcg\u00a0m-3. Looking deeper into the steps of the methods showed that the MP isolation procedure contributed slightly to the difference in the result. However, the variability between individual samples was larger than the difference caused by the methods. Somewhat sample-dependent, the use of two different substrates (zinc selenide windows versus Anodisc filters) caused a substantial difference between results. This was due to a higher tendency for particles to agglomerate on the Anodisc filters, and an 'IR-halo' around particles on ZnSe windows when scanning with \u03bcFTIR. Finally, the \u03bcFTIR settings and nominal resolution caused significant differences in identifying MP size and mass estimate, which showed that the smaller the pixel size, the more accurately the particle boundary can be defined. These findings contributed to explaining disagreements between studies and addressed the importance of harmonization of methods.", "keywords": ["Methodological approaches", "Microplastic isolation", "Comparisons", "13. Climate action", "Microplastics", "0211 other engineering and technologies", "02 engineering and technology", "FTIR analysis", "01 natural sciences", "6. Clean water", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/37619728"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "37619728", "name": "item", "description": "37619728", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/37619728"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-12-01T00:00:00Z"}}, {"id": "10.1007/s00248-003-9001-x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:15:12Z", "type": "Journal Article", "created": "2004-06-15", "title": "Microbial Community Structure And Oxidative Enzyme Activity In Nitrogen-Amended North Temperate Forest Soils", "description": "Large regions of temperate forest are subject to elevated atmospheric nitrogen (N) deposition which can affect soil organic matter dynamics by altering mass loss rates, soil respiration, and dissolved organic matter production. At present there is no general model that links these responses to changes in the organization and operation of microbial decomposer communities. Toward that end, we studied the response of litter and soil microbial communities to high levels of N amendment (30 and 80 kg ha(-1) yr(-1)) in three types of northern temperate forest: sugar maple/basswood (SMBW), sugar maple/red oak (SMRO), and white oak/black oak (WOBO). We measured the activity of extracellular enzymes (EEA) involved directly in the oxidation of lignin and humus (phenol oxidase, peroxidase), and indirectly, through the production of hydrogen peroxide (glucose oxidase, glyoxal oxidase). Community composition was analyzed by extracting and quantifying phospholipid fatty acids (PLFA) from soils. Litter EEA responses at SMBW sites diverged from those at oak-bearing sites (SMRO, BOWO), but the changes were not statistically significant. For soil, EEA responses were consistent across forests types: phenol oxidase and peroxidase activities declined as a function of N dose (33-73% and 5-41%, respectively, depending on forest type); glucose oxidase and glyoxal oxidase activities increased (200-400% and 150-300%, respectively, depending on forest type). Principal component analysis (PCA) ordinated forest types and treatment responses along two axes; factor 1 (44% of variance) was associated with phenol oxidase and peroxidase activities, factor 2 (31%) with glucose oxidase. Microbial biomass did not respond to N treatment, but nine of the 23 PLFA that formed >1 mol% of total biomass showed statistically significant treatment responses. PCA ordinated forest types and treatment responses along three axes (36%, 26%, 12% of variance). EEA factors 1 and 2 correlated negatively with PLFA factor 1 ( r = -0.20 and -0.35, respectively, n = 108) and positively with PLFA factor 3 ( r = +0.36 and +0.20, respectively, n = 108). In general, EEA responses were more strongly tied to changes in bacterial PLFA than to changes in fungal PLFA. Collectively, our data suggests that N inhibition of oxidative activity involves more than the repression of ligninase expression by white-rot basidiomycetes.", "keywords": ["Michigan", "Nitrogen", "Science", "Ecology and Evolutionary Biology", "Nature Conservation", "Microbiology", "Trees", "Soil", "Geoecology/Natural Processes", "Health Sciences", "Cellular and Developmental Biology", "Ecosystem", "Phospholipids", "Soil Microbiology", "2. Zero hunger", "Analysis of Variance", "Principal Component Analysis", "Ecology", "Life Sciences", "Natural Resources and Environment", "Molecular", "04 agricultural and veterinary sciences", "15. Life on land", "Enzymes", "13. Climate action", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "https://doi.org/10.1007/s00248-003-9001-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Microbial%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00248-003-9001-x", "name": "item", "description": "10.1007/s00248-003-9001-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00248-003-9001-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-04-19T00:00:00Z"}}, {"id": "10.1002/ecs2.1804", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:14:53Z", "type": "Journal Article", "created": "2017-05-10", "title": "Non-Target Impacts Of Weed Control On Birds, Mammals, And Reptiles", "description": "Abstract

The impacts of invasive plant control on native animals are rarely evaluated. Using data from an eight\uffe2\uff80\uff90year study in southeastern Australia, we quantified the effects on native bird, mammal, and reptile species of (1) the abundance of the invasive Bitou Bush, Chrysanthemoides monilifera ssp. rotundata, and (2) a Bitou Bush control program, which involved repeated herbicide spraying interspersed with prescribed burning. We found that overall species richness of birds, mammals, and reptiles and the majority of individual vertebrate species were unresponsive to Bitou Bush cover and the number of plants. Two species including the nationally endangered Eastern Bristlebird (Dasyurus brachypterus) responded positively to measures of native vegetation cover following the control of Bitou Bush. Analyses of the effects of different components of the treatment protocol employed to control Bitou Bush revealed (1) no negative effects of spraying on vertebrate species richness; (2) negative effects of spraying on only one individual species (Scarlet Honeyeater); and (3) lower bird species richness but higher reptile species richness after fire. The occupancy of most individual vertebrates species was unaffected by burning; four species responded negatively and one positively to fire. Our study indicated that actions to remove Bitou Bush generally have few negative impacts on native vertebrates. We therefore suggest that controlling this highly invasive exotic plant species has only very limited negative impacts on vertebrate biota.

", "keywords": ["0106 biological sciences", "weed control", "570", "Secondary effects", "off-target impacts", "animal response to weed control", "Indirect impacts", "Fire management", "590", "Non-target impacts", "herbicide impact on animals", "Herbicide impact on animals", "01 natural sciences", "invasive alien plant management", "fire management", "indirect impacts", "14. Life underwater", "non-target impacts", "Invasive alien plant management", "weed management impacts", "Animal response to weed control", "Bitou Bush", "580", "secondary effects", "Weed management impacts", "15. Life on land", "Weed control", "Off-target impacts", "3. Good health", "13. Climate action"]}, "links": [{"href": "https://eprints.soton.ac.uk/407435/1/Lindenmayer_et_al_2017_Ecopshere.pdf"}, {"href": "https://openresearch-repository.anu.edu.au/bitstream/1885/244051/3/01_Lindenmayer_Non-target_impacts_of_weed_2017.pdf.jpg"}, {"href": "https://doi.org/10.1002/ecs2.1804"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecosphere", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ecs2.1804", "name": "item", "description": "10.1002/ecs2.1804", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ecs2.1804"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-05-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2004.12.006", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:17:01Z", "type": "Journal Article", "created": "2005-01-05", "title": "Importance Of Canopy Herbivores To Dissolved And Particulate Organic Matter Fluxes To The Forest Floor", "description": "Few studies deal with the origin and contribution of organic matter (OM) fluxes from forest canopies to the variability of DOM and nutrient dynamics in the' forest floor. Recent studies indicate a microbial and phytophages origin of OM in the throughfall of temperate forest ecosystems and reported inputs of dissolved (<0.45 \u03bcm) organic carbon (DOC) with throughfall range between 40 and 160 kg C ha -1 year -1 . Data on particulate organic matter (0.45 \u03bcmIncreasing temperatures and a reduction in the frequency and severity of freezing events have been linked to species distribution shifts. Across the globe, mangrove ranges are expanding toward higher latitudes, likely due to diminishing frequency of freezing events associated with climate change. Continued warming will alter coastal wetland plant dynamics both above\uffe2\uff80\uff90 and belowground, potentially altering plant capacity to keep up with sea level rise. We conducted an in situ warming experiment, in northeast Florida, to determine how increased temperature (+2\uffc2\uffb0C) influences co\uffe2\uff80\uff90occurring mangrove and salt marsh plants. Warming was achieved using passive warming with three treatment levels (ambient, shade control, warmed). Avicennia germinans, the black mangrove, exhibited no differences in growth or height due to experimental warming, but displayed a warming\uffe2\uff80\uff90induced increase in leaf production (48%). Surprisingly, Distichlis spicata, the dominant salt marsh grass, increased in biomass (53% in 2013 and 70% in 2014), density (41%) and height (18%) with warming during summer months. Warming decreased plant root mass at depth and changed abundances of anaerobic bacterial taxa. Even while the poleward shift of mangroves is clearly controlled by the occurrences of severe freezes, chronic warming between these freeze events may slow the progression of mangrove dominance within ecotones.

", "keywords": ["0106 biological sciences", "Time Factors", "13. Climate action", "Climate Change", "Wetlands", "Florida", "Avicennia", "14. Life underwater", "15. Life on land", "Poaceae", "Plant Roots", "01 natural sciences", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1002/ecy.1539"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ecy.1539", "name": "item", "description": "10.1002/ecy.1539", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ecy.1539"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-11-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2007.06.012", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:17:02Z", "type": "Journal Article", "created": "2007-07-24", "title": "Soil And Crop Response To Harvesting Corn Residues For Biofuel Production", "description": "Corn (Zea mays L.) stover is considered one of the prime lignocellulosic feedstocks for biofuel production. While producing renewable energy from biomass is necessary, impacts of harvesting corn stover on soil organic carbon (SOC) sequestration, agricultural productivity, and environmental quality must be also carefully and objectively assessed. We conducted a 2 1/2 year study of stover management in long-term (N8 yr) no-tillage (NT) continuous corn systems under three contrasting soils in Ohio to determine changes in SOC sequestration, CO2 emissions, soil physical properties, and agronomic productivity. These measurements were made on a Rayne silt loam (RSL) (fine-loamy, mixed, active, mesic Typic Hapludult) with 6% slope, Celina silt loam (CSL) (fine, mixed, active, mesic Aquic Hapludalfs) with 2% slope, and Hoytville clay loam (HCL) (fine, illitic, mesic Mollic Epiaqualfs) with b1% slope. Stover treatments consisted of removing 0, 25, 50, 75, and 100% of corn stover following each harvest. At the start of the experiment in May 2004, these percentages of removal corresponded to 5, 3.75, 2.5, 1.25, and 0M g ha \u22121 yr \u22121 of stover left on the soil surface, respectively. Annual stover removal rate of N25% reduced SOC and soil productivity, but the magnitude of impacts depended on soil type and topographic conditions. Stover removal rate of 50% reduced grain yield by about 1.94 Mg ha \u22121 , stover yield by 0.97 Mg ha \u22121 , and SOC by 1.63 Mg ha \u22121 in an unglaciated, sloping, and erosion-prone soil (Pb0.05). The initial water infiltration rates were significantly reduced by N25% of stover removal on a RSL and CSL. Plant available water reserves and earthworm population were significantly reduced by 50% of stover removal at all soils. Increases in soil compaction due to stover removal were moderate. Stover removal impacts on SOC, crop yield, and water infiltration for HCL were not significant. Results from this study following 2 1/2 yr of stover management suggest that only a small fraction (\u226425%) of the total corn stover produced can be removed for biofuel feedstocks from sloping and erosion-prone soils.", "keywords": ["2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "7. Clean energy", "6. Clean water"], "contacts": [{"organization": "Rattan Lal, Humberto Blanco-Canqui,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2007.06.012"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2007.06.012", "name": "item", "description": "10.1016/j.geoderma.2007.06.012", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2007.06.012"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-10-01T00:00:00Z"}}, {"id": "10.1002/etc.4147", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:14:54Z", "type": "Journal Article", "created": "2018-04-10", "title": "Nanomaterials in the environment: Behavior, fate, bioavailability, and effects-An updated review", "description": "Abstract \uffe2\uff80\uff83

The present review covers developments in studies of nanomaterials (NMs) in the environment since our much cited review in 2008. We discuss novel insights into fate and behavior, metrology, transformations, bioavailability, toxicity mechanisms, and environmental impacts, with a focus on terrestrial and aquatic systems. Overall, the findings were that: 1) despite substantial developments, critical gaps remain, in large part due to the lack of analytical, modeling, and field capabilities, and also due to the breadth and complexity of the area; 2) a key knowledge gap is the lack of data on environmental concentrations and dosimetry generally; 3) substantial evidence shows that there are nanospecific effects (different from the effects of both ions and larger particles) on the environment in terms of fate, bioavailability, and toxicity, but this is not consistent for all NMs, species, and relevant processes; 4) a paradigm is emerging that NMs are less toxic than equivalent dissolved materials but more toxic than the corresponding bulk materials; and 5) translation of incompletely understood science into regulation and policy continues to be challenging. There is a developing consensus that NMs may pose a relatively low environmental risk, but because of uncertainty and lack of data in many areas, definitive conclusions cannot be drawn. In addition, this emerging consensus will likely change rapidly with qualitative changes in the technology and increased future discharges. Environ Toxicol Chem 2018;37:2029\uffe2\uff80\uff932063. \uffc2\uffa9 2018 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals, Inc. on behalf of SETAC.

", "keywords": ["aquatic and soil organisms", "hazard/risk assessment", "Nanoecotoxicity", "Biological Availability", "Environmental Exposure", "Nanometrology", "Aquatic and soil organisms; Nanometrology; Hazard/risk assessment; Nanoecotoxicity; Nanomaterials", "Ecotoxicology", "nanometrology", "01 natural sciences", "Nanostructures", "nanoecotoxicity", "13. Climate action", "Aquatic and soil organisms", "Oxidation-Reduction", "Hazard/risk assessment", "Ecosystem", "Nanomaterials", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://setac.onlinelibrary.wiley.com/doi/pdf/10.1002/etc.4147"}, {"href": "https://doi.org/10.1002/etc.4147"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Toxicology%20and%20Chemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/etc.4147", "name": "item", "description": "10.1002/etc.4147", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/etc.4147"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-04-06T00:00:00Z"}}, {"id": "10.1002/etc.5400", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:14:54Z", "type": "Journal Article", "created": "2022-06-09", "title": "Arbuscular Mycorrhizal Fungi and the Need for a Meaningful Regulatory Plant Protection Product Testing Strategy", "description": "Abstract

Arbuscular mycorrhizal fungi (AMF) perform key soil ecosystem services and, because of their symbiotic relationship with plant roots, may be exposed to the plant protection products (PPPs) applied to soils and crops. In 2017, the European Food Safety Authority (EFSA) released a scientific opinion addressing the state of the science on risk assessment of PPPs for in-soil organisms, recommending the inclusion of AMF ecotoxicological testing in the PPP regulatory process. However, it is not clear how this can be implemented in a tiered, robust, and ecologically relevant manner. Through a critical review of current literature, we examine the recommendations made within the EFSA report and the methodologies available to integrate AMF into the PPP risk assessment and provide perspective and commentary on their agronomic and ecological relevance. We conclude that considerable research questions remain to be addressed prior to the inclusion of AMF into the in-soil organism risk assessment, many of which stem from the unique challenges associated with including an obligate symbiont within the PPP risk assessment. Finally, we highlight critical knowledge gaps and the further research required to enable development of relevant, reliable, and robust scientific tests alongside pragmatic and scientifically sound guidance to ensure that any future risk-assessment paradigm is adequately protective of the ecosystem services it aims to preserve. Environ Toxicol Chem 2022;41:1808\uffe2\uff80\uff931823. \uffc2\uffa9 2022 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC.Observed responses of upland\uffe2\uff80\uff90oak vegetation of the eastern deciduous hardwood forest to changing CO2, temperature, precipitation and tropospheric ozone (O3) were derived from field studies and interpreted with a stand\uffe2\uff80\uff90level model for an 11\uffe2\uff80\uff90year range of environmental variation upon which scenarios of future environmental change were imposed. Scenarios for the year 2100 included elevated [CO2] and [O3] (+385\uffe2\uff80\uff83ppm and +20\uffe2\uff80\uff83ppb, respectively), warming (+4\uffc2\uffb0C), and increased winter precipitation (+20% November\uffe2\uff80\uff93March). Simulations were run with and without adjustments for experimentally observed physiological and biomass adjustments.

Initial simplistic model runs for single\uffe2\uff80\uff90factor changes in CO2 and temperature predicted substantial increases (+191% or 508\uffe2\uff80\uff83g\uffe2\uff80\uff83C\uffe2\uff80\uff83m\uffe2\uff88\uff922\uffe2\uff80\uff83yr\uffe2\uff88\uff921) or decreases (\uffe2\uff88\uff92206% or \uffe2\uff88\uff92549\uffe2\uff80\uff83g\uffe2\uff80\uff83C\uffe2\uff80\uff83m\uffe2\uff88\uff922\uffe2\uff80\uff83yr\uffe2\uff88\uff921), respectively, in mean annual net ecosystem carbon exchange (NEEa\uffe2\uff89\uff88266\uffc2\uffb123\uffe2\uff80\uff83g\uffe2\uff80\uff83C\uffe2\uff80\uff83m\uffe2\uff88\uff922\uffe2\uff80\uff83yr\uffe2\uff88\uff921 from 1993 to 2003). Conversely, single\uffe2\uff80\uff90factor changes in precipitation or O3 had comparatively small effects on NEEa (0% and \uffe2\uff88\uff9235%, respectively). The combined influence of all four environmental changes yielded a 29% reduction in mean annual NEEa. These results suggested that future CO2\uffe2\uff80\uff90induced enhancements of gross photosynthesis would be largely offset by temperature\uffe2\uff80\uff90induced increases in respiration, exacerbation of water deficits, and O3\uffe2\uff80\uff90induced reductions in photosynthesis. However, when experimentally observed physiological adjustments were included in the simulations (e.g. acclimation of leaf respiration to warming), the combined influence of the year 2100 scenario resulted in a 20% increase in NEEa not a decrease. Consistent with the annual model's predictions, simulations with a forest succession model run for gradually changing conditions from 2000 to 2100 indicated an 11% increase in stand wood biomass in the future compared with current conditions.

These model\uffe2\uff80\uff90based analyses identify critical areas of uncertainty for multivariate predictions of future ecosystem response, and underscore the importance of long term field experiments for the evaluation of acclimation and growth under complex environmental scenarios.

", "keywords": ["0106 biological sciences", "13. Climate action", "15. Life on land", "01 natural sciences"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2005.00991.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2005.00991.x", "name": "item", "description": "10.1111/j.1365-2486.2005.00991.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2005.00991.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-07-19T00:00:00Z"}}, {"id": "10.1002/ldr.2784", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:14:58Z", "type": "Journal Article", "created": "2017-08-24", "title": "Alleviating Nitrogen Limitation in Mediterranean Maquis Vegetation Leads to Ecological Degradation", "description": "Abstract

Soils are being degraded at an alarming rate and thereby also crucial ecosystem goods and services. Nitrogen (N) enrichment is a major driver of this degradation. While the negative impacts of N enrichment on vegetation are well known globally, those on various ecological interactions, and on ecosystem functioning, remain largely unknown. Because Mediterranean ecosystems are N limited, they are good model systems for evaluating how N enrichment impacts not only vegetation but also ecological partnerships and ecosystem functioning. Using a 7\uffe2\uff80\uff90year N\uffe2\uff80\uff90manipulation (dose and form) field experiment running in a Mediterranean Basin maquis located in a region with naturally low ambient N deposition (<4\uffc2\uffa0kg\uffc2\uffa0N\uffc2\uffa0ha\uffe2\uff88\uff921\uffc2\uffa0y\uffe2\uff88\uff921), we assessed the impacts of the N additions on (i) the dominant plant species (photosynthetic N\uffe2\uff80\uff90use efficiency); (ii) plant\uffe2\uff80\uff93soil ecological partnerships with ectomycorrhiza and N\uffe2\uff80\uff90fixing bacteria; and (iii) ecosystem degradation (plant\uffe2\uff80\uff93soil cover, biological mineral weathering and soil N fixation). N additions significantly disrupted plant\uffe2\uff80\uff93soil cover, plant\uffe2\uff80\uff93soil biotic interactions, and ecosystem functioning compared with ambient N deposition conditions. However, the higher the ammonium dose (alone or with nitrate), the more drastic these disruptions were. We report a critical threshold at 20\uffe2\uff80\uff9340\uffc2\uffa0kg ammonium ha\uffe2\uff88\uff921\uffc2\uffa0y\uffe2\uff88\uff921 whereby severe ecosystem degradation can be expected. These observations are critical to help explain the mechanisms behind ecosystem degradation, to describe the collective loss of organisms and multifunction in the landscape, and to predict potential fragmentation of Mediterranean maquis under conditions of unrelieved N enrichment. Copyright \uffc2\uffa9 2017 John Wiley & Sons, Ltd.
We incubated temperate forest soil at constant temperature (20 \u00b0C) and water content, and exposed it to strong single-pulse perturbations, which nonetheless mimic common pulse-events in temperate soils (glucose addition at 4 mg g\u22121 soil, or freeze-thawing overnight at \u221220 \u00b0C). We subsequently measured microbial community composition and microbial storage compounds via phospho- and neutral lipid fatty acid (PLFA and NLFA) profiling, as well as C/N stoichiometry of microbial biomass and dissolved organic carbon and nitrogen in the soil solution shortly after (0.4, 1, 4, and 6 days) and after longer time periods (84 and 160 days) following the perturbations.

Transferring the soils from their natural environment to the laboratory and incubating them under controlled conditions led to a continuous change of microbial community structure over time, along with an increase in microbial biomass and dissolved N in both perturbed and control soils over the time of the experiment. Against the background of this \u2018press-disturbance\u2019, caused by the permanently changed conditions, we see immediate and long-lasting effects of the single pulse events on microbial community composition, C storage and C/N stoichiometry. Both perturbations significantly influenced the microbial community structure (based on PLFA profiles), microbial biomass N and dissolved N up to 160 days, as well as fungal and bacterial biomass and storage (based on absolute PLFA and NLFA concentrations) up to 84 days. Both perturbations increased microbial N (+59.6 \u00b5g g\u22121 dw) and decreased dissolved N (\u221240.3 \u00b5g g\u22121 dw) after 160 days, and significantly altered C/N ratios in microbial and dissolved pools (particularly in the first 6 days of the experiment).

Our results demonstrate that single-pulse perturbations can have long-term legacies in soil microbial ecosystems. In our experiment they led to alternative system states which differed from the unperturbed control in multiple parameters even after 160 days. This indicates that soil microbial communities exhibit a low resistance and resilience towards single-pulse perturbations, and may easily be pushed on alternative trajectories by short but strong environmental pulses.", "keywords": ["0301 basic medicine", "2. Zero hunger", "106022 Mikrobiologie", "0303 health sciences", "Resilience", "04 agricultural and veterinary sciences", "15. Life on land", "Perturbations", "6. Clean water", "Transient state", "Pulse event", "03 medical and health sciences", "106026 \u00d6kosystemforschung", "13. Climate action", "Soil microbial community", "106022 Microbiology", "0401 agriculture", " forestry", " and fisheries", "106026 Ecosystem research"]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2023.116399"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2023.116399", "name": "item", "description": "10.1016/j.geoderma.2023.116399", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2023.116399"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-04-01T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2005.00935.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:19:28Z", "type": "Journal Article", "created": "2005-04-07", "title": "Elevated Atmospheric Co2 Effects On Biomass Production And Soil Carbon In Conventional And Conservation Cropping Systems", "description": "Abstract

Increasing atmospheric CO2 concentration has led to concerns about potential effects on production agriculture as well as agriculture's role in sequestering C. In the fall of 1997, a study was initiated to compare the response of two crop management systems (conventional and conservation) to elevated CO2. The study used a split\uffe2\uff80\uff90plot design replicated three times with two management systems as main plots and two CO2 levels (ambient=375\uffe2\uff80\uff83\uffce\uffbcL\uffe2\uff80\uff83L\uffe2\uff88\uff921 and elevated CO2=683\uffe2\uff80\uff83\uffce\uffbcL\uffe2\uff80\uff83L\uffe2\uff88\uff921) as split\uffe2\uff80\uff90plots using open\uffe2\uff80\uff90top chambers on a Decatur silt loam (clayey, kaolinitic, thermic Rhodic Paleudults). The conventional system was a grain sorghum (Sorghum bicolor (L.) Moench.) and soybean (Glycine max (L.) Merr.) rotation with winter fallow and spring tillage practices. In the conservation system, sorghum and soybean were rotated and three cover crops were used (crimson clover (Trifolium incarnatum L.), sunn hemp (Crotalaria juncea L.), and wheat (Triticum aestivum L.)) under no\uffe2\uff80\uff90tillage practices. The effect of management on soil C and biomass responses over two cropping cycles (4 years) were evaluated. In the conservation system, cover crop residue (clover, sunn hemp, and wheat) was increased by elevated CO2, but CO2 effects on weed residue were variable in the conventional system. Elevated CO2 had a greater effect on increasing soybean residue as compared with sorghum, and grain yield increases were greater for soybean followed by wheat and sorghum. Differences in sorghum and soybean residue production within the different management systems were small and variable. Cumulative residue inputs were increased by elevated CO2 and conservation management. Greater inputs resulted in a substantial increase in soil C concentration at the 0\uffe2\uff80\uff935\uffe2\uff80\uff83cm depth increment in the conservation system under CO2\uffe2\uff80\uff90enriched conditions. Smaller shifts in soil C were noted at greater depths (5\uffe2\uff80\uff9310 and 15\uffe2\uff80\uff9330\uffe2\uff80\uff83cm) because of management or CO2 level. Results suggest that with conservation management in an elevated CO2 environment, greater residue amounts could increase soil C storage as well as increase ground cover.

", "keywords": ["0106 biological sciences", "2. Zero hunger", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2005.00935.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2005.00935.x", "name": "item", "description": "10.1111/j.1365-2486.2005.00935.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2005.00935.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-03-23T00:00:00Z"}}, {"id": "10.1016/j.jenvman.2014.05.032", "type": "Feature", "geometry": null, "properties": {"updated": "2026-06-24T16:17:13Z", "type": "Journal Article", "created": "2014-06-18", "title": "Five Crop Seasons' Records Of Greenhouse Gas Fluxes From Upland Fields With Repetitive Applications Of Biochar And Cattle Manure", "description": "The application of char to agricultural land is recognized as a potential way to sequester atmospheric carbon (C) assimilated by plants in soil, thus decelerating global warming. Such a process would also be expected to improve plant growth and the physical and chemical properties of soil. However, field investigations of the effects of continuous char application have not been reported. In the present study, the effects of repetitive bamboo char application on CO2, CH4, and N2O flux from soil, soil C content, and crop yield were investigated at two upland fields over five crop seasons. Three treatments: chemical fertilizer (CF) applied plots (Control plot); cattle manure (CM) (10\u00a0t\u00a0ha(-1)) and CF applied plot (CM plot); and bamboo char (20\u00a0t\u00a0ha(-1)), cattle manure (10\u00a0t\u00a0ha(-1)), and CF applied plot (Char/CM plot), were arranged in each field. After three crop seasons, the fourth treatment with char was applied without CF (Char plot) was given to one of the fields. CM and/or char were applied every crop season. Gas fluxes were measured using the static chamber method. Seasonal variations in CO2 flux and total CO2 emissions were consistently similar between the CM and Char/CM plots and between the Char and Control plots. As such, the decomposition rate of bamboo char was quite small, and the positive or negative effect of char on CM decomposition was not significant in the fields. Soil C analysis provided confirmation of this. CM application enhanced N2O emission mainly in the summer crop season. The differences in total N2O emission between the Char/CM and CM plots as well as between the Char and Control plots were insignificant in most cases. Total CH4 flux was negligibly small in all cases. Although the yield of winter crop (broccoli) in the Char/CM plots was twice observed to be higher than that in the Control and CM plots at one of the fields, in general, the char application had no effect on overall crop yield. Thus, the repeated application of bamboo char had no significant influence on greenhouse gas emissions and crop yields, but a high C accumulating function was found.", "keywords": ["Crops", " Agricultural", "Greenhouse Effect", "2. Zero hunger", "Air Pollutants", "Nitrous Oxide", "Agriculture", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "01 natural sciences", "12. Responsible consumption", "Manure", "Random Allocation", "Soil", "Japan", "13. Climate action", "Charcoal", "Animals", "0401 agriculture", " forestry", " and fisheries", "Cattle", "Gases", "Seasons", "Fertilizers", "Methane", "0105 earth and related environmental sciences"], "contacts": [{"organization": "Naoya Kanazaki, Akira Watanabe, Akira Shibata, Shuhei Makabe, Kosuke Ikeya, Yuki Sugiura,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.jenvman.2014.05.032"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Environmental%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jenvman.2014.05.032", "name": "item", "description": "10.1016/j.jenvman.2014.05.032", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jenvman.2014.05.032"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-11-01T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Climate&offset=50&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Climate&offset=50&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "prev", "title": "items (prev)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Climate&offset=0", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Climate&offset=100", "hreflang": "en-US"}], "numberMatched": 7981, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-06-25T11:13:58.116469Z"}