{"type": "FeatureCollection", "features": [{"id": "10.1016/j.jhazmat.2021.125292", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:16:14Z", "type": "Journal Article", "created": "2021-02-05", "title": "Reactive-transport modelling of Enterococcus faecalis JH2-2 passage through water saturated sediment columns", "description": "The reuse of treated wastewater (e.g. for irrigation) is a common practice to combat water scarcity problems world-wide. However, the potential spread of opportunistic pathogens and fecal contaminants like Enterococci within the subsoil could pose serious health hazards. Additional sources (e.g., leaky sewer systems, livestock farming) aggravate this situation. This study contributes to an understanding of pathogen spread in the environment, using a combined modelling and experimental approach. The impact of quartz sediment and certain wastewater characteristics on the dissemination of Enterococcus faecalis JH2-2 is investigated. The transport processes of advection-dispersion and straining were studied by injecting conservative saline tracer and fluorescent microspheres through sediment packed columns, and evaluating resulting breakthrough curves using models. Similarly, simultaneously occurring reactive processes of microbial attachment, decay, respiration and growth were studied by injecting Enterococcus faecalis JH2-2 suspended in water with or without dissolved oxygen (DO) and nutrients through sediment, and evaluating resulting inlet and outlet concentration curves. The processes of straining, microbial decay and growth, were important when DO was absent. Irreversible attachment was important when DO was present. Sensitivity analysis of each parameter was conducted, and field scale behavior of the processes was predicted, to facilitate future work.", "keywords": ["Physical Phenomena", "13. Climate action", "Enterococcus faecalis", "Water Movements", "0207 environmental engineering", "Water", "02 engineering and technology", "01 natural sciences", "Enterococcus", "6. Clean water", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.jhazmat.2021.125292"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Hazardous%20Materials", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jhazmat.2021.125292", "name": "item", "description": "10.1016/j.jhazmat.2021.125292", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jhazmat.2021.125292"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-07-01T00:00:00Z"}}, {"id": "10.1038/s41598-022-23318-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:17:09Z", "type": "Journal Article", "created": "2022-11-05", "title": "Optical photothermal infrared spectroscopy with simultaneously acquired Raman spectroscopy for two-dimensional microplastic identification", "description": "Abstract<p>In recent years, vibrational spectroscopic techniques based on Fourier transform infrared (FTIR) or Raman microspectroscopy have been suggested to fulfill the unmet need for microplastic particle detection and identification. Inter-system comparison of spectra from reference polymers enables assessing the reproducibility between instruments and advantages of emerging quantum cascade laser-based optical photothermal infrared (O-PTIR) spectroscopy. In our work, IR and Raman spectra of nine plastics, namely polyethylene, polypropylene, polyvinyl chloride, polyethylene terephthalate, polycarbonate, polystyrene, silicone, polylactide acid  and polymethylmethacrylate were simultaneously acquired using an O-PTIR microscope in non-contact, reflection mode. Comprehensive band assignments were presented. We determined the agreement of O-PTIR with standalone attenuated total reflection FTIR and Raman spectrometers based on the hit quality index (HQI) and introduced a two-dimensional identification (2D-HQI) approach using both Raman- and IR-HQIs. Finally, microplastic particles were prepared as test samples from known materials by wet grinding, O-PTIR data were collected and subjected to the 2D-HQI identification approach. We concluded that this framework offers improved material identification of microplastic particles in environmental, nutritious and biological matrices.</p", "keywords": ["Science", "Microplastics", "Q", "R", "Reproducibility of Results", "Spectrum Analysis", " Raman", "Polypropylenes", "01 natural sciences", "Article", "0104 chemical sciences", "Spectroscopy", " Fourier Transform Infrared", "Medicine", "Plastics", "Water Pollutants", " Chemical", "Environmental Monitoring"]}, "links": [{"href": "https://www.nature.com/articles/s41598-022-23318-2.pdf"}, {"href": "https://doi.org/10.1038/s41598-022-23318-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Scientific%20Reports", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41598-022-23318-2", "name": "item", "description": "10.1038/s41598-022-23318-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41598-022-23318-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-05T00:00:00Z"}}, {"id": "10.1038/srep06365", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:17:10Z", "type": "Journal Article", "created": "2014-09-15", "title": "Earthworms increase plant production: a meta-analysis", "description": "To meet the challenge of feeding a growing world population with minimal environmental impact, we need comprehensive and quantitative knowledge of ecological factors affecting crop production. Earthworms are among the most important soil dwelling invertebrates. Their activity affects both biotic and abiotic soil properties, in turn affecting plant growth. Yet, studies on the effect of earthworm presence on crop yields have not been quantitatively synthesized. Here we show, using meta-analysis, that on average earthworm presence in agroecosystems leads to a 25% increase in crop yield and a 23% increase in aboveground biomass. The magnitude of these effects depends on presence of crop residue, earthworm density and type and rate of fertilization. The positive effects of earthworms become larger when more residue is returned to the soil, but disappear when soil nitrogen availability is high. This suggests that earthworms stimulate plant growth predominantly through releasing nitrogen locked away in residue and soil organic matter. Our results therefore imply that earthworms are of crucial importance to decrease the yield gap of farmers who can't -or won't- use nitrogen fertilizer.", "keywords": ["Crops", " Agricultural", "agroecosystems", "Nitrogen", "growth", "n pools", "01 natural sciences", "nitrogen", "Article", "Animals", "Biomass", "soil carbon", "Oligochaeta", "Ecosystem", "agriculture", "0105 earth and related environmental sciences", "2. Zero hunger", "tolerance", "04 agricultural and veterinary sciences", "15. Life on land", "Carbon", "communities", "13. Climate action", "8. Economic growth", "0401 agriculture", " forestry", " and fisheries", "ecosystem services", "management"]}, "links": [{"href": "https://doi.org/10.1038/srep06365"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Scientific%20Reports", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/srep06365", "name": "item", "description": "10.1038/srep06365", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/srep06365"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-09-15T00:00:00Z"}}, {"id": "10.1073/pnas.2113148118", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:17:22Z", "type": "Journal Article", "created": "2021-09-14", "title": "Microbial self-recycling and biospherics", "description": "Microbes are well known as potent recyclers of leftover biomass in ecosystems, preventing nutrient cycles from simply getting stuck (1). However, a lot less is known about how microbes can recycle themselves, their own biomass. This is highly relevant, because microbes don\u2019t often find themselves in front of a lavish buffet, but rather have to eke out a living at the edge of nutrient and energy starvation. In their paper in PNAS, Shoemaker et al. (2) examine the ability of populations of bacteria to recycle their own biomass, elegantly combining long-term experiments with modeling. The authors enclosed 100 populations from 21 different taxa individually and followed their fate for 3 y\u2014all in the absence of matter or energy inputs. They find that almost all populations (except for one) survived, with extinction times estimated often in decades and far exceeding what would be expected from individual longevity under conditions of resource limitation. Thus, in many of the bacterial strains, when individuals die, living individuals can use the dead biomass of other individuals to increase their own survival and reproduction, thus greatly prolonging population persistence.  These results are relevant to many questions in environmental microbiology. For example, this recycling ability, and thus the ability to maintain oneself during periods of adversity, may be part of the remarkable \u2026   [\u21b5][1]1To whom correspondence may be addressed. Email: rillig{at}zedat.fu-berlin.de.   [1]: #xref-corresp-1-1", "keywords": ["2. Zero hunger", "15. Life on land", "Ecological Systems", " Closed", "Life Support Systems", "12. Responsible consumption", "3. Good health"]}, "links": [{"href": "https://pnas.org/doi/pdf/10.1073/pnas.2113148118"}, {"href": "https://doi.org/10.1073/pnas.2113148118"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20National%20Academy%20of%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1073/pnas.2113148118", "name": "item", "description": "10.1073/pnas.2113148118", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1073/pnas.2113148118"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-07T00:00:00Z"}}, {"id": "10.1111/gcb.12819", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:17:48Z", "type": "Journal Article", "created": "2014-12-05", "title": "Soil Warming And Co2 Enrichment Induce Biomass Shifts In Alpine Tree Line Vegetation", "description": "Abstract<p>Responses of alpine tree line ecosystems to increasing atmospheric CO2 concentrations and global warming are poorly understood. We used an experiment at the Swiss tree line to investigate changes in vegetation biomass after 9\uffc2\uffa0years of free air CO2 enrichment (+200\uffc2\uffa0ppm; 2001\uffe2\uff80\uff932009) and 6\uffc2\uffa0years of soil warming (+4\uffc2\uffa0\uffc2\uffb0C; 2007\uffe2\uff80\uff932012). The study contained two key tree line species, Larix decidua and Pinus uncinata, both approximately 40\uffc2\uffa0years old, growing in heath vegetation dominated by dwarf shrubs. In 2012, we harvested and measured biomass of all trees (including root systems), above\uffe2\uff80\uff90ground understorey vegetation and fine roots. Overall, soil warming had clearer effects on plant biomass than CO2 enrichment, and there were no interactive effects between treatments. Total plant biomass increased in warmed plots containing Pinus but not in those with Larix. This response was driven by changes in tree mass (+50%), which contributed an average of 84% (5.7\uffc2\uffa0kg\uffc2\uffa0m\uffe2\uff88\uff922) of total plant mass. Pinus coarse root mass was especially enhanced by warming (+100%), yielding an increased root mass fraction. Elevated CO2 led to an increased relative growth rate of Larix stem basal area but no change in the final biomass of either tree species. Total understorey above\uffe2\uff80\uff90ground mass was not altered by soil warming or elevated CO2. However, Vaccinium myrtillus mass increased with both treatments, graminoid mass declined with warming, and forb and nonvascular plant (moss and lichen) mass decreased with both treatments. Fine roots showed a substantial reduction under soil warming (\uffe2\uff88\uff9240% for all roots &lt;2\uffc2\uffa0mm in diameter at 0\uffe2\uff80\uff9320\uffc2\uffa0cm soil depth) but no change with CO2 enrichment. Our findings suggest that enhanced overall productivity and shifts in biomass allocation will occur at the tree line, particularly with global warming. However, individual species and functional groups will respond differently to these environmental changes, with consequences for ecosystem structure and functioning.</p>", "keywords": ["0106 biological sciences", "2. Zero hunger", "Models", " Statistical", "Temperature", "Larix", "Carbon Dioxide", "15. Life on land", "Pinus", "Global Warming", "01 natural sciences", "Soil", "Species Specificity", "13. Climate action", "Biomass", "Tundra", "Switzerland"]}, "links": [{"href": "https://doi.org/10.1111/gcb.12819"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.12819", "name": "item", "description": "10.1111/gcb.12819", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.12819"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-01-30T00:00:00Z"}}, {"id": "10.1111/gcb.70130", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:17:50Z", "type": "Journal Article", "created": "2025-03-18", "title": "What Are the Limits to the Growth of Boreal Fires?", "description": "ABSTRACT<p>Boreal forest regions, including East Siberia, have experienced elevated fire activity in recent years, leading to record\uffe2\uff80\uff90breaking greenhouse gas emissions and severe air pollution. However, our understanding of the factors that eventually halt fire spread and thus limit fire growth remains incomplete, hindering our ability to model their dynamics and predict their impacts. We investigated the locations and timing of 2.2 million fire stops\uffe2\uff80\uff94defined as 300\uffe2\uff80\uff89m unburned pixels along fire perimeters\uffe2\uff80\uff94across the vast East Siberian taiga. Fire stops were retrieved from remote sensing data covering over 27,000 individual fires that collectively burned 80 Mha between 2012 and 2022. Several geospatial datasets, including hourly fire weather data and landscape variables, were used to identify the factors contributing to individual fire stops. Our analysis attributed 87% of all fire stops to a statistically significant (p\uffe2\uff80\uff89&lt;\uffe2\uff80\uff890.01) change in one or more of these drivers, with fire\uffe2\uff80\uff90weather drivers limiting fire growth over time and landscape drivers constraining it across space. We found clear regional and temporal variations in the importance of these drivers. For instance, landscape drivers\uffe2\uff80\uff94such as less flammable land cover and the presence of roads\uffe2\uff80\uff94were key constraints on fire growth in southeastern Siberia, where the landscape is more populated and fragmented. In contrast, fire weather was the primary constraint on fire growth in the remote northern taiga. Additionally, in central Yakutia, a major fire hotspot in recent years, fuel limitations from previous fires increasingly restricted fire spread. The methodology we present is adaptable to other biomes and can be applied globally, providing a framework for future attribution studies on global fire growth limitations. In northeast Siberia, we found that with increasing droughts and heatwaves, remote northern fires could potentially grow even larger in the future, with major implications for the global carbon cycle and climate.</p", "keywords": ["Siberia", "Climate Change", "Taiga", "Remote Sensing Technology", "Life Science", "Weather", "Fires", "Research Article", "Wildfires"], "contacts": [{"organization": "Thomas A. J. Janssen, Sander Veraverbeke,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1111/gcb.70130"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.70130", "name": "item", "description": "10.1111/gcb.70130", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.70130"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-03-01T00:00:00Z"}}, {"id": "10.1111/gcbb.12255", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:17:51Z", "type": "Journal Article", "created": "2015-02-19", "title": "Bioenergy Harvest, Climate Change, And Forest Carbon In The Oregon Coast Range", "description": "Abstract<p>Forests provide important ecological, economic, and social services, and recent interest has emerged in the potential for using residue from timber harvest as a source of renewable woody bioenergy. The long\uffe2\uff80\uff90term consequences of such intensive harvest are unclear, particularly as forests face novel climatic conditions over the next century. We used a simulation model to project the long\uffe2\uff80\uff90term effects of management and climate change on above\uffe2\uff80\uff90 and belowground forest carbon storage in a watershed in northwestern Oregon. The multi\uffe2\uff80\uff90ownership watershed has a diverse range of current management practices, including little\uffe2\uff80\uff90to\uffe2\uff80\uff90no harvesting on federal lands, short\uffe2\uff80\uff90rotation clear\uffe2\uff80\uff90cutting on industrial land, and a mix of practices on private nonindustrial land. We simulated multiple management scenarios, varying the rate and intensity of harvest, combined with projections of climate change. Our simulations project a wide range of total ecosystem carbon storage with varying harvest rate, ranging from a 45% increase to a 16% decrease in carbon compared to current levels. Increasing the intensity of harvest for bioenergy caused a 2\uffe2\uff80\uff933% decrease in ecosystem carbon relative to conventional harvest practices. Soil carbon was relatively insensitive to harvest rotation and intensity, and accumulated slowly regardless of harvest regime. Climate change reduced carbon accumulation in soil and detrital pools due to increasing heterotrophic respiration, and had small but variable effects on aboveground live carbon and total ecosystem carbon. Overall, we conclude that current levels of ecosystem carbon storage are maintained in part due to substantial portions of the landscape (federal and some private lands) remaining unharvested or lightly managed.\uffc2\uffa0Increasing the intensity of harvest for bioenergy on currently harvested land, however,\uffc2\uffa0led to a relatively small reduction in the ability of forests to store carbon. Climate change is unlikely to substantially alter carbon storage in these forests, absent shifts in disturbance regimes.</p>", "keywords": ["0106 biological sciences", "Carbon dioxide mitigation", "Forest ecology -- Oregon -- Oregon Coast Range", "Forest biomass", "13. Climate action", "Carbon cycle (Biogeochemistry)", "Biomass energy", "Forest Biology", "15. Life on land", "01 natural sciences", "7. Clean energy", "Climatic change", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/gcbb.12255"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcbb.12255", "name": "item", "description": "10.1111/gcbb.12255", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcbb.12255"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-05-25T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2008.01809.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:17:55Z", "type": "Journal Article", "created": "2008-11-04", "title": "Soil Organic Carbon Contents In Long-Term Experimental Grassland Plots In The Uk (Palace Leas And Park Grass) Have Not Changed Consistently In Recent Decades", "description": "Abstract<p>A recent report of widespread declines in soil organic C (SOC) in the UK over the 10\uffe2\uff80\uff9325 years until the early 2000s has focussed attention on the importance of resampling previously characterized sites to assess long\uffe2\uff80\uff90term trends in SOC contents and the importance of soils as a potentially volatile and globally significant reservoir of terrestrial C. We have used two sets of long\uffe2\uff80\uff90term experimental plots which have been under constant and known management for over a century and for which historical data exist that allow comparison over recent decades to determine what, if any, changes in SOC content have occurred. The plots used are the Palace Leas (PL) Meadow Hay Plots in north\uffe2\uff80\uff90east England (UK) established in 1897, and from the Park Grass (PG) Continuous Hay experiment established in 1856 at Rothamsted in south\uffe2\uff80\uff90east England. Collectively, these plots represent the only grassland sites in the UK under long\uffe2\uff80\uff90term management where changes in SOC over several decades can be assessed, and are probably unique in the world. The plots have received different manure and fertilizer treatment and have been under known management for at least 100 years. In 1982, total SOC contents were determined for the 0\uffe2\uff80\uff9327\uffe2\uff80\uff83cm layer of six of the PL plots using measurements of SOC concentrations, bulk density and soil depth. In 2006, the same six PL plots were resampled and SOC contents determined again. Four of the plots showed no net change in SOC content, but two plots showed net loss of SOC of 15% and 17% (amounting to decreases of 18 and 15\uffe2\uff80\uff83t\uffe2\uff80\uff83C\uffe2\uff80\uff83ha\uffe2\uff88\uff921) since 1982. However, these differences in total SOC content were in a similar range to the variations in bulk density (6\uffe2\uff80\uff9331%) with changing soil water content. In 1959, the soil masses and SOC concentrations to 23\uffe2\uff80\uff83cm depth were measured on six PG plots with fertilizer and manure treatments corresponding closely with those measured on PL. In 2002, the SOC concentrations on the same plots were measured again. On three of the PG plots, SOC concentrations had declined by 2\uffe2\uff80\uff9310%, but in the other three it had increased by 4\uffe2\uff80\uff938% between 1959 and 2002. If it is assumed that the soil bulk density had not changed over this period, the losses of SOC from the top soils ranged range from 10 to 3\uffe2\uff80\uff83t\uffe2\uff80\uff83C\uffe2\uff80\uff83ha\uffe2\uff88\uff921, while the gains ranged from 4 to 7\uffe2\uff80\uff83t\uffe2\uff80\uff83C\uffe2\uff80\uff83ha\uffe2\uff88\uff921. When the differences with time in SOC contents for the six PL and the six PG plots were examined using paired t\uffe2\uff80\uff90tests, that is, regarding the plots as two sets of six replicate permanent grasslands, there were no significant differences between 1982 and 2006 for the PL plots or between 1959 and 2002 for the PG plots. Thus, these independent observations on similar plots at PL and PG indicate there has been no consistent decrease in SOC stocks in surface soils under old, permanent grassland in England in recent decades, even though meteorological records for both sites indicate significant warming of the soil and air between 1980 and 2000. Because the potential influences of changes in management or land use have been definitively excluded, and measured rather than derived bulk densities have been used to convert from SOC concentrations to SOC amounts, our observations question whether for permanent grassland in England, losses in SOC in recent decades reported elsewhere can be attributed to widespread environmental change.</p>", "keywords": ["2. Zero hunger", "Ecology", "0401 agriculture", " forestry", " and fisheries", "biodiversity conservation", "04 agricultural and veterinary sciences", "15. Life on land", "Environmental Sciences"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2008.01809.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2008.01809.x", "name": "item", "description": "10.1111/j.1365-2486.2008.01809.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2008.01809.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-06-05T00:00:00Z"}}, {"id": "10.1117/12.2624440", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:18:07Z", "type": "Journal Article", "created": "2022-05-19", "title": "Perfluorinated polymer fibre Bragg grating sensors for distributed low-dose clinical X-ray measurements", "description": "Optical fibres have played an important role in the advancement of real-time dosimetry in clinical applications in recent years. Significant work has been done to increase precision and accuracy in detecting radiation doses during treatment, to avoid the negative effect that can ensue from irradiating healthy tissue around the tumour. The drive to develop distributed measurement in optical fibres has been limited to the slow scanning speed systems from optical time domain reflectometry (OTDR), however for radiotherapy dosimetry, with often short radiation pulse durations, fibre Bragg grating (FBG) interrogation is a better alternative because of the fast-scanning speed. The work presented here includes the preliminary results in the characterisation of CYTOP FBGs on exposure to X-ray radiation emitted from a clinical linear accelerator (linac) machine. A blue shifted linear response of the Bragg wavelength with sensitivity of 6.655 pm/Gy, 6.519 pm/Gy and 7.153 pm/Gy at the three main peaks (1522 nm, 1542 and 1561 nm), was recorded for a 9 Gy of radiation at a dose rate of 1.758 Gy/min with an amplitude fluctuation within the duration of radiation. The response demonstrates the potential for its use in low dose radiation dosimetry, providing for quasi-distributed sensing in radiotherapy.", "keywords": ["0211 other engineering and technologies", "fibre optics dosimetry", "02 engineering and technology", "Electrical Engineering - Electronic Engineering - Information Engineering", "X-ray", "Fibre Bragg grating", "Optical fibres", "Radiation Monitoring", "Dosimetry", "fibre Bragg grating sensors", "0202 electrical engineering", " electronic engineering", " information engineering", "fibre optics sensors", "Engineering and Technology", "CYTOP", "low-dose clinical X-ray measurements"]}, "links": [{"href": "https://doi.org/10.1117/12.2624440"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Micro-Structured%20and%20Specialty%20Optical%20Fibres%20VII", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1117/12.2624440", "name": "item", "description": "10.1117/12.2624440", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1117/12.2624440"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-19T00:00:00Z"}}, {"id": "10.17026/dans-z8z-5t4e", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:18:35Z", "type": "Dataset", "title": "Consumers' attitudes towards microbial applications in food production", "description": "The data was collected using an online survey as part of the research activities of the European Horizon 2020 project SIMBA (Sustainable Innovation of Microbiome Applications in the Food System). Online surveys were used to collect consumer respondent data for three food products (wheat bread, consumer potatoes and tomato sauce). These food products were selected as part of the EU Horizon 2020 SIMBA project for reflecting the diversity of food value chains in terms of organisation, technology, climatic conditions and consumption patterns across the EU. Three questionnaires corresponding to the three food products were prepared. The questionnaires consisted of four main parts: (1) socio-demographic characteristics (e.g. gender, education, income; Part One), (2) health and environmental concerns related to chemical use in farming, knowledge about microbial applications, perceived microbial health risks and attitude towards microbial applications in food production (Part Two), (3) questions for eliciting a consumer\u2019s willingness-to-pay (WTP) for a food product that had been obtained through a microbial-enhanced production system with reduced or no chemical use (Part Three), and (4) questions for eliciting a respondent\u2019s food choice motives (FCMs) using de Boer et al.\u2019s (2007) FCM questionnaire (Part Four). In addition, the questionnaire had an introduction section containing information sheet about the study and a consent form. The consent form and the information sheet for safeguarding the ethical aspects of this study (e.g. data handling, privacy and potential risks to respondents) were approved by the General Assembly of the SIMBA project as well as the Social Sciences Ethics Committee of Wageningen University prior to distributing the surveys. We collected data primarily from three countries: Germany, Italy and Netherlands.The data was collected to undertake a study to support the uptake of food products that are produced and/or processed using microbial applications. The aim of the survey was to get some insights about food choice motives of consumers, and the socio-demographic and behavioural factors influencing their food choices. The survey specifically aimed to assess the preferences and perceptions, and willingness-to-pay of consumers to wheat, potato and tomato-based food products that are produced and/or processed using microbial applications.", "keywords": ["2. Zero hunger", "13. Climate action", "Economics", "Social and Behavioural Sciences", "Business and Management", "Food economics", "12. Responsible consumption"], "contacts": [{"organization": "BM Ali", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.17026/dans-z8z-5t4e"}, {"rel": "self", "type": "application/geo+json", "title": "10.17026/dans-z8z-5t4e", "name": "item", "description": "10.17026/dans-z8z-5t4e", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.17026/dans-z8z-5t4e"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.2139/ssrn.5084742", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:19:01Z", "type": "Journal Article", "created": "2025-05-25", "title": "ZnO-nanostructured electrochemical sensor for efficient detection of glyphosate in water", "description": "Glyphosate is a widely used broad-spectrum herbicide for controlling grassy weeds, despite having potential health hazards. Herein, we report on a solid-state electrochemical sensor based on ZnO nanoparticles (ZnO NPs) for on-site detection of glyphosate. Accordingly, ZnO NPs was drop-cast on the surface of a disposable screen-printed carbon electrode. Eco-friendly ZnO NPs of only 7 nm crystallite sizes were obtained by green sol-gel synthesis using lemon (Citrus limon) waste aqueous extract as the green reducing and capping/stabilizing agent and Zn nitrate precursor as evidenced by scanning electron microscopy (SEM), transmission electron microscopy (TEM), X-ray diffraction and diffuse reflectance. SEM confirmed successful electrode functionalization with the synthesized nanoparticles. Under laboratory conditions in acetate buffer (pH 5), the sensor demonstrated excellent selectivity and sensitivity, with a detection limit of 0.648 \u00b5M, a wide linear detection range (0.5 \u00b5M to 7.5 mM), and a rapid detection time of 30 min. When tested in river water, the sensor achieved a detection limit of 0.96 \u00b5M using differential pulse voltammetry. It also exceptionally tolerated interference from similar organophosphorus compounds and ions commonly found in river water. The excellent detection performance of the sensor was attributed to the strong coordination interactions between Zn atoms and phosphonate/carboxylate groups that are enhanced by a hydrogen bond at acidic pH, as determined by chemical calculations. This disposable sensor offers a cost-effective, efficient, and environmentally friendly solution for monitoring glyphosate in water systems.", "keywords": ["QD71-142", "Environmental water", "Eco-friendly ZnO nanoparticles", "Computational modeling", "Pesticides", "Eco-friendly ZnO nanoparticles;", "[SDV.MP] Life Sciences [q-bio]/Microbiology and Parasitology", "Analytical chemistry", "Sensor"]}, "links": [{"href": "https://doi.org/10.2139/ssrn.5084742"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Talanta%20Open", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2139/ssrn.5084742", "name": "item", "description": "10.2139/ssrn.5084742", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2139/ssrn.5084742"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-01T00:00:00Z"}}, {"id": "10.3389/fbioe.2019.00378", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:19:12Z", "type": "Journal Article", "created": "2019-12-04", "title": "Thickness of Polyelectrolyte Layers of Separately Confined Bacteria Alters Key Physiological Parameters on a Single Cell Level", "description": "Confinement of bacterial cells in a matrix or in capsules is an integral part of many biotechnological applications. Here, the well-known layer-by-layer method of deposition of a polyelectrolyte film a few nanometers in thickness to confine separated bacterial cells in permeable and physically durable shells has been examined. Due to the physical properties of such a confinement, we found that this method enables investigation of effects of physical barriers against mass gain and cell division. Using the method of time-lapse confocal microscopy, we observed a prolonged lag phase, dependent on the number of polyelectrolyte layers. In the confinement, both the GFP fluorescent signal from the leaking T7 promoter and the cell size were increased by factors of more than five and two, respectively. This creates a paradigm shift that enables use of mechanical entrapment for control of bacterial cell physiology and opens possibilities of controlling the division rate as well as gene expression. These effects can be attributed to the perturbation of the sensing of the cell size, which results in disproportional synthesis of a cell envelope impinging the intracellular material and compels cells to grow rapidly. In addition, the charged surface of cells enables prolonged intercellular physical interaction and results in spherically shaped microcolonies.", "keywords": ["polyelectrolytes", "0301 basic medicine", "0303 health sciences", "03 medical and health sciences", "layer-by-layer encapsulation", "time-lapse confocal microscopy", " polyelectrolytes", " layer-by-layer encapsulation", " electrostatic interactions", " cell surface modification", "cell surface modification", "Bioengineering and Biotechnology", "electrostatic interactions", "time-lapse confocal microscopy", "TP248.13-248.65", "Biotechnology"]}, "links": [{"href": "https://doi.org/10.3389/fbioe.2019.00378"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Bioengineering%20and%20Biotechnology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fbioe.2019.00378", "name": "item", "description": "10.3389/fbioe.2019.00378", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fbioe.2019.00378"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-04T00:00:00Z"}}, {"id": "10.3390/agronomy11040652", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:19:18Z", "type": "Journal Article", "created": "2021-03-29", "title": "Wheat Yield Forecasting for the Tisza River Catchment Using Landsat 8 NDVI and SAVI Time Series and Reported Crop Statistics", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Due to the increasing global demand of food grain, early and reliable information on crop production is important in decision making in agricultural production. Remote sensing (RS)-based forecast models developed from vegetation indices have the potential to give quantitative and timely information on crops for larger regions or even at farm scale. Different vegetation indices are being used for this purpose, however, their efficiency in estimating crop yield certainly needs to be tested. In this study, wheat yield was derived by linear regressing reported yield values against a time series of six different peak-seasons (2013\u20132018) using the Landsat 8-derived Normalized Difference Vegetation Index (NDVI) and Soil Adjusted Vegetation Index (SAVI). NDVI- and SAVI-based forecasting models were validated based on 2018\u20132019 datasets and compared to evaluate the most appropriate index that performs better in forecasting wheat production in the Tisza river basin. Nash-Sutcliffe efficiency index was positive with E1 = 0.716 for the model from NDVI and for SAVI E1 = 0.909, which means that the forecasting method developed and performed good forecast efficiency. The best time for wheat yield prediction with Landsat 8-SAVI and NDVI was found to be the beginning of full biomass period from the 138th to 167th day of the year (18 May to 16 June; BBCH scale: 41\u201371) with high regression coefficients between the vegetation indices and the wheat yield. The RMSE of the NDVI-based prediction model was 0.357 t/ha (NRMSE: 7.33%). The RMSE of the SAVI-based prediction model was 0.191 t/ha (NRMSE 3.86%). The validation of the results revealed that the SAVI-based model provided more accurate forecasts compared to NDVI. Overall, probable yield amount is possible to predict far before harvest (six weeks earlier) based on Landsat 8 NDVI and SAVI and generating simple thresholds for yield forecasting, and a potential loss of wheat yield can be mapped.</p></article>", "keywords": ["Landsat 8", "2. Zero hunger", "SAVI", "NDVI", "S", "13. Climate action", "wheat", "yield forecasting", "Agriculture", "15. Life on land", "6. Clean water"]}, "links": [{"href": "http://www.mdpi.com/2073-4395/11/4/652/pdf"}, {"href": "https://www.mdpi.com/2073-4395/11/4/652/pdf"}, {"href": "https://doi.org/10.3390/agronomy11040652"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/agronomy11040652", "name": "item", "description": "10.3390/agronomy11040652", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/agronomy11040652"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-03-29T00:00:00Z"}}, {"id": "10.3390/su12051962", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:19:30Z", "type": "Journal Article", "created": "2020-03-04", "title": "Transitioning European Protein-Rich Food Consumption and Production towards More Sustainable Patterns\u2014Strategies and Policy Suggestions", "description": "<p>Global and European diets have shifted towards greater consumption of animal proteins. Recent studies urge reversals of these trends and call for a rapid transition towards adoption of more plant-based diets. This paper explored mechanisms to increase the production and consumption of plant-proteins in Europe by 2030, using participatory backcasting. We identified pathways to the future (strategies), as well as interim milestones, barriers, opportunities and actions, with key European stakeholders in the agri-food chain. Results show that four strategies could be implemented to achieve the desired future: increased research and development, enriched consumer education and awareness, improved and connected supply and value chains and public policy supports. Actions needed to reach milestones were required immediately, reinforcing the need for urgent actions to tackle the protein challenge. This study concretely detailed how idealized dietary futures can be achieved in a real-world context. It can support EU protein transition by informing policy makers and the broader public on potential ways to move towards a more sustainable plant-based future. The outputs of this analysis have the potential to be combined with dietary scenarios to develop more temporally explicit models of future dietary changes and how to reach them.</p>", "keywords": ["future", "2. Zero hunger", "Agricultura", "pathways", "food security", "01 natural sciences", "stakeholders", "Econom\u00eda", "12. Responsible consumption", "sustainable agriculture", "meat substitutes", "Medio Ambiente", "plant protein", "13. Climate action", "backcasting", "value chain", "meat substitution", "europe", "diet", "plant proteins", "0105 earth and related environmental sciences"]}, "links": [{"href": "http://www.mdpi.com/2071-1050/12/5/1962/pdf"}, {"href": "https://www.mdpi.com/2071-1050/12/5/1962/pdf"}, {"href": "https://doi.org/10.3390/su12051962"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Sustainability", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/su12051962", "name": "item", "description": "10.3390/su12051962", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/su12051962"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-04T00:00:00Z"}}, {"id": "10.5194/bg-15-1933-2018", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:19:52Z", "type": "Journal Article", "created": "2017-11-21", "title": "Straw incorporation increases crop yield and soil organic carbon sequestration but varies under different natural conditions and farming practices in China: a system analysis", "description": "<p>Abstract. Loss of soil organic carbon (SOC) from agricultural soils is a key indicator of soil degradation associated with reductions in net primary productivity in crop production systems worldwide. Simple technical and locally appropriate solutions are required for farmers to increase SOC and to improve cropland management. In the last 30 years, straw incorporation has gradually been implemented across China in the context of agricultural intensification and rural livelihood improvement. A meta-analysis of data published before the end of 2016 was undertaken to investigate the effects of straw incorporation on crop production and SOC sequestration. The results of 68 experimental studies throughout China in different edaphic, climate regions and under different farming regimes were analyzed. Compared with straw removal, straw incorporation significantly sequestered SOC (0\uffe2\uff80\uff9320\uffe2\uff80\uff89cm depth) at the rate of 0.35 (range 0.31\uffe2\uff80\uff930.40)\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921, increased crop grain yield by 13.4\uffe2\uff80\uff89% (range 9.3\uffe2\uff80\uff89%\uffe2\uff80\uff9318.4\uffe2\uff80\uff89%) and had a conversion efficiency of the applied straw-C as 16\uffe2\uff80\uff89%\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff892\uffe2\uff80\uff89% across the whole of China. The combined straw incorporation at the rate of 3\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921 with mineral fertilizer of 200\uffe2\uff80\uff93400\uffe2\uff80\uff89kg N\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921 was demonstrated to be the best combination for farmers to use with crop yield increased by 32.7\uffe2\uff80\uff89% (range 17.9\uffe2\uff80\uff89%\uffe2\uff80\uff9356.4\uffe2\uff80\uff89%) and SOC sequestrated by the rate of 0.85 (range 0.54\uffe2\uff80\uff931.15)\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921. Straw incorporation achieved higher SOC sequestration rate and crop yield increment when applied to clay soils, under high cropping intensities, and in areas like Northeast China where the soil is being degraded. SOC responses were the greatest in the initial starting phase of straw incorporation and then declined and finally were negligible after 28\uffe2\uff80\uff9362 years, however, crop yield responses were initially low and then increased reaching their highest level at 11\uffe2\uff80\uff9315 years after straw incorporation. Overall, our study confirmed that straw incorporation did create a positive feedback loop of SOC enhancement together with increased crop production, and this is of great practical significance to straw management as agricultural intensifies in China and other regions in the world with different climate conditions.                         </p>", "keywords": ["2. Zero hunger", "QE1-996.5", "info:eu-repo/classification/ddc/550", "Ecology", "Life", "QH501-531", "0401 agriculture", " forestry", " and fisheries", "Geology", "04 agricultural and veterinary sciences", "15. Life on land", "QH540-549.5"]}, "links": [{"href": "https://doi.org/10.5194/bg-15-1933-2018"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biogeosciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5194/bg-15-1933-2018", "name": "item", "description": "10.5194/bg-15-1933-2018", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5194/bg-15-1933-2018"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-11-21T00:00:00Z"}}, {"id": "10.5194/bg-7-315-2010", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:19:54Z", "type": "Journal Article", "created": "2010-04-29", "description": "<p>Abstract. Global climate change in the real world always exhibits simultaneous changes in multiple factors. Prediction of ecosystem responses to multi-factor global changes in a future world strongly relies on our understanding of their interactions. However, it is still unclear how nitrogen (N) deposition and elevated atmospheric carbon dioxide concentration [CO2] would interactively influence forest floor soil respiration in subtropical China. We assessed the main and interactive effects of elevated [CO2] and N addition on soil respiration by growing tree seedlings in ten large open-top chambers under CO2 (ambient CO2 and 700 \uffce\uffbcmol mol\uffe2\uff88\uff921) and nitrogen (ambient and 100 kg N ha\uffe2\uff88\uff921 yr\uffe2\uff88\uff921) treatments. Soil respiration, soil temperature and soil moisture were measured for 30 months, as well as above-ground biomass, root biomass and soil organic matter (SOM). Results showed that soil respiration displayed strong seasonal patterns with higher values observed in the wet season (April\uffe2\uff80\uff93September) and lower values in the dry season (October\uffe2\uff80\uff93March) in all treatments. Significant exponential relationships between soil respiration rates and soil temperatures, as well as significant linear relationships between soil respiration rates and soil moistures (below 15%) were found. Both CO2 and N treatments significantly affected soil respiration, and there was significant interaction between elevated [CO2] and N addition (p&lt;0.001, p=0.003, and p=0.006, respectively). We also observed that the stimulatory effect of individual elevated [CO2] (about 29% increased) was maintained throughout the experimental period. The positive effect of N addition was found only in 2006 (8.17% increased), and then had been weakened over time. Their combined effect on soil respiration (about 50% increased) was greater than the impact of either one alone. Mean value of annual soil respiration was 5.32 \uffc2\uffb1 0.08, 4.54 \uffc2\uffb1 0.10, 3.56 \uffc2\uffb1 0.03 and 3.53 \uffc2\uffb1 0.03 kg CO2 m\uffe2\uff88\uff922 yr\uffe2\uff88\uff921 in the chambers exposed to elevated [CO2] and high N deposition (CN), elevated [CO2] and ambient N deposition (CC), ambient [CO2] and high N deposition (NN), and ambient [CO2] and ambient N deposition (CK as a control), respectively. Greater above-ground biomass and root biomass was obtained in the CN, CC and NN treatments, and higher soil organic matter was observed only in the CN treatment. In conclusion, the combined effect of elevated [CO2] and N addition on soil respiration was apparent interaction. They should be evaluated in combination in subtropical forest ecosystems in China where the atmospheric CO2 and N deposition have been increasing simultaneously and remarkably.                     </p>", "keywords": ["0106 biological sciences", "2. Zero hunger", "QE1-996.5", "Ecology", "Geology", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "6. Clean water", "Life", "13. Climate action", "QH501-531", "0401 agriculture", " forestry", " and fisheries", "QH540-549.5", "0105 earth and related environmental sciences"], "contacts": [{"organization": "Qi Deng, Shuangquan Liu, Honglang Duan, Guoyi Zhou, Juxiu Liu, Dainan Zhang,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5194/bg-7-315-2010"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biogeosciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5194/bg-7-315-2010", "name": "item", "description": "10.5194/bg-7-315-2010", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5194/bg-7-315-2010"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-08-24T00:00:00Z"}}, {"id": "10.5281/zenodo.10060810", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:03Z", "type": "Dataset", "title": "SoilCompDB: Global soil compressive properties database. Version 1.0", "description": "Data collection and processing Our data collection comprised published journal articles sourced from Web of Science and Scopus databases, using search terms such as 'soil precompression stress,' 'soil compression index,' 'soil compaction index,' 'soil recompression index,' 'soil swelling index,' 'soil precompaction stress,' and 'preconsolidation pressure' for articles published up to February 2022. \u00a0A total of 1235 publications were found. Duplicate records were eliminated using the Endnote Web citation management application. The remaining references were exported to Rayyan software for title and abstract screening based on predefined criteria for full-text selection. \u00a0After a careful review, we identified 128 papers where the data on soil compressive properties (precompression stress, compression index, and swelling index) were reported in numerical format or legible graphical format and considered suitable for inclusion in the database. \u00a0We employed the WebPlotDigitizer software to extract data from figures within the original publications. For each chosen study, we systematically recorded data concerning soil compressive properties and collected information on soil properties, soil conditions, site characteristics, and experimental settings. We compiled 4,743 individual data entries. Time and place The database includes data from 128 independent studies published between 1992 and 2021. Each study reported between 1 and 360 measurements, with a study median of 14 measurements and a mean of 38 measurements, totalling 4743 database entries. Our database includes data from 20 countries, with a significant concentration of the data originating from Brazil, followed by Germany, Switzerland, Sweden, and Denmark. The majority of the data came from arable soils, representing approximately 72% of data entries.\u00a0\u00a0 Instruments The soil compressive properties included in the database were based on soil compressive tests performed in the laboratory by uniaxial method. The procedure used for stress application on soil samples was mainly the stepwise stress application method, while the constant strain rate method was applied in few studies (less than 2% of the data). The component of the compressive curve related to the soil packing state was represented by soil bulk density, void ratio, and strain. The stress component of the curve was represented in a logarithmic form in the entirety of the database. The database also comprised eight different methods for calculating precompresion stress: Casagrande (1936), Dias Junior and Pierce (1995), Lamand\u00e9 et al. (2017), Sullivan and Robertson (1996), Casini (2012), Culley and Larson (1987), Pacheco Silva (1990), Gregory et al. (2006). Resources Web of Science, Scopus \u2013 literature search Endnote Web \u2013 removal of duplicates Rayyan software \u2013 initial paper selection based on title and abstract WebPlotDigitizer \u2013 data extraction from figures Microsoft Access \u2013 database platform Description of the collected data (column, unit, and description) Sample ID-\u00a0\u00a0\u00a0 A unique identification number assigned to each individual sample within the database\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Study ID- Identification number assigned to each research study in the database Reference - Research paper reference Year - Year of research paper publication \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Language - Language of the research paper \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Soil classification (SiBCS) - Soil Classification according to the Brazilian System (SiBCS), as described in portuguese-language papers Soil classification (original in paper) - Soil classification described in research paper\u00a0 Soil classification (convertion to Soil Taxonomy orders) -\u00a0 Soil classification aligned with the Soil Taxonomy system developed by the United States Department of Agriculture (USDA)\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Location - Study location country\u00a0\u00a0\u00a0 Texture classification (USDA) -\u00a0Soil textural classification according USDA Texture\u00a0 classification USDA (letter code) - Letter code for soil textural classification according USDA: S=sand; LS=loamy sand; SL=sandy loam; SiL=silt loam; Si=silt; L=loam; SCL= Sandy clay loam; SiCL=Silty clay loam; CL=clay loam; SC=Sandy clay; SiC=Silty clay; C=clay Clay (USDA) - % - Soil clay content (weight based) - (<0.002 mm) \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Silt (USDA) - % - Soil silt content (weight based) - (0.002 < x < 0.05 mm, interpolated for European samples where needed using the k-nearest neighbor technique by Nemes et al. 2006)\u00a0 Sand (USDA) - % - Soil sand content (weight based)\u00a0 - (0.05 < x < 2 mm, interpolated for European samples where needed using the k-nearest neighbor technique by Nemes et al. 2006) USDA PSD interpolated - =0 if the data was NOT interpolated; =1 if the data was interpolated Published texture class - Texture classification provided in the source publication when the values for clay, silt and sand were not available Clay - g kg-1 - Soil clay content - original in the paper Clay class upper boundary - \u00b5m - The clay class upper boundary informed in source publication Silt - g kg-1 - Silt clay content - original in the paper Silt class upper boundary - \u00b5m - The silt class upper boundary informed in source publication Sand - Soil sand content - original in the paper Sand class upper boundary - \u00b5m - The sand class upper boundary informed in source publication Particle size data flag - =0 if no issues; =1 if there are issues (summing) Sum particle size- g kg-1 - Sum of clay, silt, and sand content Soil depth FROM \u2013 cm - When soil depth is presented as a range (e.g., 0-10cm), it indicates the minimum depth at which soil samples were collected\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Soil depth TO \u2013 cm - When soil depth is presented as a range (e.g., 0-10cm), it indicates the maximum depth at which soil samples were collected\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Depth \u2013 cm -Specific depth value as presented in paper, or when soil depth is showed as a range (e.g., 0-10cm), it indicates the average depth at which soil samples were collected (e.g 5cm) \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 SOC - g kg-1 - Soil organic carbon content informed in research paper or soil organic carbon content calculate from soil organic matter content by multiplying by 0,58\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 SOC converted from SOM - 1= yes for soil organic carbon derived from soil organic matter content calculations Particle density - Mg m-3 - Soil particle density\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Initial matric potential \u2013 hPa - Soil water matric potential before loading log Initial matric potential - Soil water matric potential expressed by log\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Wetness (based on initial matric potential) - \u00a01=if initial matric potential (MP)<100 hPa; 2= if 100<=initial MP<1000 hPa; 3= initial MP>=1000 hPa Initial gravimetric water content - g g-1 - Gravimetric soil water content before loading provided by source publication, or calculated by volumetric water content divided by soil bulk density Initial volumetric water content - m3 m-3 - Volumetric soil water content before loading, when the soil bulk density was not reported Initial water content data source -\u00a0Graph or table from where the data was collected, or explanation on calculation used Matric potential type - Compressive tests performed on soil samples under different conditions: 1= equilibrated at matric potential; 2= field matric potential; 3= air-dried samples\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Initial bulk density - Mg m-3 - Soil bulk density before loading\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Initial BD data source - Graph or table from where the data was collected, or explanation on calculation used\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Initial volumetric water content calculated - m3 m-3 - Soil volumetric water content calculated by multiplying soil gravimetric water content by soil bulk density Precompression stress \u2013 kPa - Precompression stress \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Precompression stress (SD) \u2013 kPa - Standard deviation for precompression stress values reported in paper\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Precompression stress data source - Graph or table from where the data was collected, or explanation on calculation used Compression index - Compression index \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Compression index (SD) - Standard deviation of compression index values reported in paper\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Compression index data source - Graph or table from where the data was collected, or explanation on calculation used Swelling index - Swelling index\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Swelling index (SD) - Standard deviation of swelling index values reported in paper\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 \u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0 Swelling index data source - Graph or table from where the data was collected, or explanation on calculation used N -\u00a0Number of replicates used for calculating precompression stress, compression index, and swelling index when mean values are reported Land use (paper) -\u00a0Land use described in the research paper Land use (categories) -\u00a0Land use categorized Land use standardized -\u00a0Land use classified as: arable, forest, grassland, and native vegetation. The latter includes forest, grassland, and savanna Land use (number code) -\u00a0Number code for land use: 1=Arable, 2= forest, 3= grassland, and 4= native vegetation Tillage system -\u00a0Tillage system Tillage system (arable soils) - Tillage system for arable soils classified as 'conventional' and 'conservation' Coordinates -\u00a0\u00a0Geographical coordinates\u00a0 of study location Climate -\u00a0Climatic region classification: temperate, tropical, subtropical Climatecod -\u00a0\u00a0\u00a0 Code number assigned to each climatic region: 1=temperate, 2=tropical, 3=subtropical Sampling position (paper) -\u00a0Field position where soil samples were collected with details described in the paper Sampling position -\u00a0Field position where soil samples were collected standardized Treatment -\u00a0Experimental treatment type where the soil samples were collected Stress rate - \u00a0kPa - Stress applied in compressive tests\u00a0 Minimum stress \u2013\u00a0kPa - Minimum stress applied in compressive tests Maximum stress \u2013\u00a0kPa - Maximum stress applied in compressive tests Number of stress rate steps -\u00a0Number of steps in stepwise stress application procedure Stess application type -\u00a01=Stepwise stress 2=one sample per stress 3=Strain controlled Stess application type \u2013\u00a0min - Time for stress application in each step in stepwise stress application procedure Degree of deformation at the end of loading -\u00a0% - Degree of deformation at the end of compressive test Sample diameter \u2013\u00a0cm - Diameter of the soil samples Sample height \u2013\u00a0cm - Height of the soil samples Ratio sample diameter and height\u00a0-\u00a0Ratio between diameter and height of the soil samples Sample volume -\u00a0cm3 -Sample volume when the sample diameter and height are nor presented Precompression stress calculation method -\u00a0Calculation method of precompression stress Precompression stress calculation method (number code) -\u00a0Number code for calculation method PC:1=Casagrande (1936); 2=Dias Junior and Pierce (1995); 3= Lamand\u00e9 et al. (2017); 4=O`Sullivan and Robertson (1996); 5=Casini (2012); 6=Culley and Larson (1987);7=ABNT (1990); 8=Gregory et al. (2006) Description of precompression stress calculation -\u00a0Brief explanation of precompression stress calculation Soil compressive curve components -\u00a0Component of the soil compression curve related to the soil packing state: soil bulk density, void ratio, and strain.\u00a0 Soil compressive curve components (number code) -\u00a0Number code for component of the soil compressive curve related to the soil packing state: 1= soil bulk density; 2= strain; 3= void ratio Curve components source -\u00a0Source of the component of the soil compressive curve related to the soil packing state: 1= showed in the paper, 2= according to original method for precompression stress calculation, 3= described in method, but not clear in the paper Compressive curve available -\u00a0Original soil compressive curve available in the paper: 1= No 2=Yes Comments -\u00a0Brief comments on the paper Issues and remarks We sought out important information not included in the paper by directly communicating with the authors whenever possible. In cases where multiple papers covered the same experiment, we prioritized the one offering more comprehensive details. If two papers complemented each other, we included both. When analyzing studies comparing various methods for calculating soil precompression stress, we exclusively gathered data calculated using the widely accepted Casagrande (1936) method. To ensure comparability across studies, we standardized the collected data by converting it to the same unit. The standardization process involved: i) assuming that 58% of soil organic matter (SOM) was soil organic carbon (SOC) when only SOM was reported, ii) calculating soil bulk density using a soil particle density of 2.65 Mg m-3 when only total porosity data were provided, and iii) harmonizing all texture data to the USDA classification system, which defines the silt/sand boundary as 50 \u03bcm, utilizing the k-nearest neighbor approach (referred to as 'similarity method' by Nemes et al. (1999). \u00a0 Reference Associa\u00e7\u00e3o Brasileira de Normas T\u00e9cnicas - ABNT. NBR 12007: Ensaio de adensamento unidimensional. Rio de Janeiro: 1990. Casagrande, A., 1936. Determination of the preconsolidation load and its practical significance. In: Proceedings of the International Conference on Soil Mechanics and Foundation Engineering, vol. III, Harvard University, Cambridge, MA, pp. 60\u201364.Casini, F. 2012. Deformation induced by wetting: A simple model. Can. Geotech. J. 49:954\u2013960 10.1139/T2012-054. doi:10.1139/t2012-054 Culley, J.L.B., Larson, W.E., 1987. Susceptibility to compression of a clay loam Haplaquoll. Soil Sci. Soc. Am. J. 51, 562\u2013567. Dias Junior, M.S., Pierce, F.J., 1995. A simple procedure for estimating preconsolidation pressure from soil compression curves. Soil Technology 8, 139\u2013151. doi:10.1016/0933-3630(95)00015-8 Gregory, A.S., Whalley, W.R., Watts, C.W., Bird, N.R.A., Hallett, P.D., Whitmore, A.P., 2006. Calculation of the compression index and pre-compression stress from soil compression test data. Soil Till Res. 89:45-57. doi:10.1016/j.still.2005.06.012 Lamand\u00e9, M., Schj\u00f8nning, P., Labouriau, R., 2017. A novel method for estimating soil precompression stress from uniaxial confined compression tests. Soil Sci. Soc. Am. J. 81 https://doi.org/10.2136/sssaj2016.09.0274. Nemes, A., \u00a0W\u00f6sten, J.H.M., Lilly, A., \u00a0Oude Voshaar, J.H., 1999. Evaluation of different procedures to interpolate the cumulative particle-size distribution to achieve compatibility within a soil database.\u00a0Geoderma 90: 187-202. 129\u00a0 O'Sullivan, M.F., Robertson, E.A.G., 1996. Critical state parameters from intact samples of two agricultural topsoils. Soil Tillage Res 39(3 \u2013 4):161 \u2013 173.", "keywords": ["2. Zero hunger", "soil compression curve", "precompression stress", "15. Life on land", "soil mechanical properties", "compression index", "soil moisture", "uniaxial compression test", "swelling index"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.10060810"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.10060810", "name": "item", "description": "10.5281/zenodo.10060810", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.10060810"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-11-06T00:00:00Z"}}, {"id": "10.5281/zenodo.13374006", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:22Z", "type": "Dataset", "title": "Microbial biomass and water-extractable carbon on Mt. Kilimanjaro", "description": "This dataset presents the value of microbial biomass carbon (MBC) and water-extractable carbon (WOC) at study plots under KiLi project.  Microbial biomass carbon (MBC) and water-extractable organic carbon (WOC) \u2013 as sensitive and important parameters for soil fertility and C turnover \u2013 are strongly affected by land-use changes all over the world. These effects are particularly distinct upon conversion of natural to agricultural ecosystems due to very fast carbon (C) and nutrient cycles and high vulnerability, especially in the tropics. The objective of this study was to use the unique advantage of Mt. Kilimanjaro \u2013 altitudinal gradient leading to different tropical ecosystems but developed all on the same soil parent material \u2013 to investigate the effects of land-use change and elevation on MBC and WOC contents during a transition phase from dry to wet season. Down to a soil depth of 50\u00a0cm, we compared MBC and WOC contents of 2 natural (Ocotea\u00a0and\u00a0Podocarpus forest), 3 seminatural (lower montane forest, grassland, savannah), 1 sustainably used (homegarden) and 2 intensively used (maize field, coffee plantation) ecosystems on an elevation gradient from 950 to 2850\u00a0m a.s.l.  The KiLi project (2010-2018) is a German Science Foundation (DFG) funded research unit (DFG research unit FOR1246) that focuses on biodiversity and ecosystem processes along altitudinal and disturbance gradients on Mt. Kilimanjaro (Tanzania, Africa), capitalizing on its world-wide unique range of climatic and vegetation zones. The research unit comprises 2 central projects and 7 subprojects from various disciplines. On a total of 60 study sites in both natural and human-disturbed ecosystems biodiversity (e.g. plants, soil arthropods, ants, bees, frogs, lizards, bats, birds), related ecosystem processes (decomposition, seed dispersal, pollination, herbivory, predation), and biogeochemical processes and properties of ecosystems (climate, soil properties and nutrient status, regulation of water and carbon fluxes, trace gas emissions, primary productivity, functional diversity) are analyzed.", "keywords": ["land-use change", "microbial carbon dynamics", "tropical ecosystem", "andosol", "elevation gradient", "water-extractable carbon"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.13374006"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.13374006", "name": "item", "description": "10.5281/zenodo.13374006", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.13374006"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-08-26T00:00:00Z"}}, {"id": "10.5281/zenodo.13952097", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:24Z", "type": "Dataset", "created": "2024-01-01", "title": "SERENA EJPSoil Soil erosion control in Tuscany (Italy)", "description": "Open AccessThe internal EJP SOIL project SERENA contributed to the evaluation of soil multifunctionality aiming at providing assessment tools for land planning and soil policies at different scales. By co-working with relevant stakeholders, the project provided co-developed indicators and associated cookbooks to assess and map them, to report both on soil degradation, soil-based ecosystem services and their bundles, under actual conditions and for climate and land-use changes, at the regional, national, and European scales.  One of the\u00a0objective of SERENA project was to develop methods to calculate and map soil-based ecosystem services and soil threats. The present data was prepared according to the methodology of the SERENA Soil erosion and soil erosion control cookbook.\u00a0 Soil loss was used as an indicator for soil erosion (ST). The map of soil mass not eroded was based on the RUSLE model. Soil erosion control was calculated as the difference between potential and actual soil erosion (SES, ecosystem service of soil erosion protection, i.e. soil eroded mass retained by vegetation, Mg/ha/y). For Italy, the cookbook was applied in the Tuscany region. \u00a0     To create the soil loss map we used:\u00a0       for R-factor, not freely available database of meteorological parameters spatialized at 250 m (minimum and maximum daily air temperature; cumulate daily precipitation) over Tuscany region (period 1990\u20132022, Lamma Consortium)\u00a0 and a local linear equation between R and mean annual precipitation (P);   for C -factor, Regional Land use map 1:10.000 (2018, freely available at:\u00a0https://www502.regione.toscana.it/geoscopio/usocoperturasuolo.html) and ESDAC method (https://doi.org/10.1016/j.landusepol.2015.05.021) ; \u00a0  for K-factor, sand, silt, clay, and O.C. (%) maps (built from 4.000 soil profiles, following FAO\u2019s methodology in GSP-GSOC map, Lamma Consortium), and Torri et al. (1997) function;   for LS-factor, DEM 10 m of Tuscany, (freely available at\u00a0https://www502.regione.toscana.it/geoscopio/cartoteca.html99) and Desmet & Govers (1996) SAGA tool (applied at 10 m and upscaled);   for P-factor, not freely available database 1:10.00 of terraced areas (Lamma Consortium, 2020) (for terraced areas a multiplication factor of\u00a0 0.5\u00a0 was considered, based on expert evaluation)   for P-factor, not freely available database 1:10.00 of terraced areas (Lamma Consortium, 2020) (for terraced areas a multiplication factor\u00a0of\u00a0 0.5\u00a0 was considered, based on expert evaluation)\u00a0      Maps was delivered in the GeoTIFF format in the resolution of 100m. \u00a0     Delivered data will be validated by stakeholders from Italy (scientist) in October, 2024.", "keywords": ["Italy", "Tuscany", "SERENA project", "Soil-based ecosystem service", "RUSLE", "soil erosion control", "Grant n. 862695", "EJP-Soil"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.13952097"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.13952097", "name": "item", "description": "10.5281/zenodo.13952097", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.13952097"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-10-18T00:00:00Z"}}, {"id": "10.5281/zenodo.14761001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:36Z", "type": "Software", "title": "PyretoClustR (executable version)", "description": "PyretoClustR (executable version)  Distilling the Pareto Optimal Front into Actionable Insights  ##Highlights:    Open-access tool to cluster and visualize complex multi-dimensional Pareto solutions  Bridging the gap between decision and objective space through intuitive visualizations  Implements k-means and k-medoids clustering without expert knowledge  Uses frequency maps to display hotspot locations for spatial optimization problems  Increasing stakeholder accessibility to Pareto solutions   Program languages: Python, RSoftware availability (source code version): https://github.com/SydneyEWhite/Pareto_ClusteringSoftware availability (executable version, with python and libraries implemented): Zenodo (10.5281/zenodo.14761001)  ## Overview    This framework performs k-means and k-medoids clustering on a set of Pareto optimal solutions derived from a multi-objective optimization algorithm.  (Optional) A correlation matrix of the input variables is returned (the goal is to help users reduce the input variable count).  Before clustering occurs, the data is cast onto principal component axes and extreme solutions are handled (if desired).  The code iterates through different possible inputs for the number of clusters, the number of principal components, and the variables that define 'extreme solutions'.  After these iterations, the best solution, as defined by silhouette score, is visualized in several ways:    Representative solutions are plotted on up to 4 dimensions  Distributions of values within the clusters are plotted in a violin plot  (optional) Maps with the frequency of a trait can be plotted, if locational data (*.shp file) is provided     ## Background: executable version  Unlike the version of PyretoClustR available on GitHub (https://github.com/SydneyEWhite/PyretoClustR), this version on Zenodo represents a standalone version of PyretoClustR not requiring a Python installation. The python_files folder contains three executables and one folder called _internal. The executables can be run by clicking on them. The _internal folder is crucial for the standalone operation of the executables and should not be modified or deleted.  ## Example Data  The data provided in the input folder (pareto_and_scen_solutions.csv and the shapefiles) are part of the BiodivERsA project TALE (\u2018Towards multifunctional agricultural landscapes in Europe\u2019). This project optimized four objectives, Agricultural gross margin (AY), Breeding habitat (BH), Low flow (LF), Nitrate load (NL) and four different land use scenarios (SQ, BAU, EXT, INT) were distinguished in the decision space.\u00a0The config.ini has been adapted to run with this dataset. To run it with your own data please alter the respective input values as outlined in config.ini.  ## Directory Structure  project_root/||\u2500\u2500 README.md||\u2500\u2500 input/|\u00a0 |\u2500\u2500 config.ini|\u00a0 |\u2500\u2500 [your_input_data].csv| \u2514\u2500\u2500 [shape_files]||\u2500\u2500 python_files/|\u00a0 |\u2500\u2500 _internal|\u00a0 |\u2500\u2500 correlation_matrix.exe|\u00a0 |\u2500\u2500 kmeans.exe| \u2514\u2500\u2500 kmedoid.exe||\u2500\u2500 r_files/| \u2514\u2500\u2500 plot_frequency_maps.R|\u2514\u2500\u2500 output/ (populated once code is run)\u00a0\u00a0 |\u2500\u2500 correlation_matrix.csv (if run)\u00a0\u00a0 |\u2500\u2500 kmeans_data_w_clusters_representativesolutions.csv (created with kmeans.exe when Extreme Solutions are not handled)\u00a0\u00a0\u00a0 |\u2500\u2500 kmeans_data_w_clusters_representativesolutions_outliers.csv (created with kmeans.exe when Extreme Solutions are handled)\u00a0\u00a0 |\u2500\u2500 kmedoid_data_w_clusters_representativesolutions.csv (created with kmedoid.exe when Extreme Solutions are not handled)\u00a0\u00a0 |\u2500\u2500 kmedoid_data_w_clusters_representativesolutions_outliers.csv (created with kmedoid.exe when Extreme Solutions are handled)\u00a0 \u2514\u2500\u2500 freq_map_cluster_X.png (if run)", "keywords": ["Multi-objective optimization", "Pareto pruning", "Land management", "Pareto optimal data", "visualization", "clustering"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.14761001"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.14761001", "name": "item", "description": "10.5281/zenodo.14761001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.14761001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-29T00:00:00Z"}}, {"id": "10.5281/zenodo.15096788", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:42Z", "type": "Dataset", "title": "HWSD2_Climate_and_Socioeconomic_agriculturalsoil_dataset_mainland_portugal", "description": "The study uses the Harmonized World Soil Database (HWSD v2.0) developed by FAO and IIASA for biophysical models and agroecological queries. This database consolidates information from various sources, including the European Soil Database, the 1:1 million soil map of China, and national soil maps from Afghanistan, Ghana, and T\u00fcrkiye. It has a spatial resolution of around 1 km and is revised in 2013 and 2023. HWSD v2.0 includes detailed information on soil mapping units, general soil unit information, and specific physical and chemical soil unit characteristics across seven depth layers.  The database fields cover a wide range of attributes, such as soil texture, bulk density, organic carbon content, pH, and cation exchange capacity. The harmonization process ensures that data from different sources is standardized and integrated, providing a consistent and reliable dataset for various applications. However, the HWSD v2.0 has some limitations, such as combining soil inventories gathered at different times, scales, and precision, which may affect its reliability for national studies. It is recommended to use national-level harmonized soil databases for more accurate results in specific regions.  For Portugal's mainland, the data presented in the HWSD v2.0 dataset is sourced from the European Soil Data Centre (ESDAC), which contains various metrics of chemical and physical soil properties. Out of the 2882 Portuguese parishes, only 22 are left out, representing 0.76% percent of the total number of parishes.  The study uses several datasets to analyze land use and occupation in Portugal. The Land Use and Occupation Map (COS2007v3.0) is a detailed thematic map of land use and occupation for mainland Portugal, developed by the Directorate-General for Territory (DGT). The data is organized hierarchically and includes 83 classes of land use and occupation. The CHELSA database, maintained by the Swiss Federal Institute for Forest, Snow, and Landscape Research (WSL), provides bioclimatic indexes for precipitation and average temperature over various temporal intervals and variables.  The National Institute of Statistics (INE) provides data on agricultural machinery distribution across different geographical locations. The dataset covers the total number of agricultural machines, as well as specific categories such as wheeled and tracked tractors, motor cultivators, power hoes, motor mowers, and combine harvesters. The dataset also examines the distribution of farms with access to irrigation based on geographical location.  The burned land data from 1975 to 2023 provides a comprehensive overview of fire occurrences and their impact over time. This data is crucial for understanding long-term patterns, assessing the effectiveness of fire prevention measures, and informing future land management and policy decisions.  Lastly, the population density dataset from the 2021 Census and the 2011 Census provides a decennial comparison of total population density across different geographical regions. These data are essential for understanding the evolution of land use and occupation in Portugal and their implications for environmental and agricultural consequences.", "keywords": ["Soil", "Total organic carbon", "Land use", "Soil use", "Atmospheric precipitation", "Soil type", "Organic carbon", "Land surface temperature"], "contacts": [{"organization": "Almeida Santos, R. G. F.", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15096788"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15096788", "name": "item", "description": "10.5281/zenodo.15096788", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15096788"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-03-27T00:00:00Z"}}, {"id": "10.5281/zenodo.15328215", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:45Z", "type": "Dataset", "title": "1000 Soils Pilot Dataset, version 8, May 2025", "description": "This record hosts data generated by the 1000 Soils Pilot. Data will be updated as more become available. Please see the most recent data upload for current data.  A beta visualization tool is available for some data types at\u00a0https://shinyproxy.emsl.pnnl.gov/app/1000soils. Please submit any suggestions or comments through the 'contact' tab. We are actively working to improve visualizations and value all feedback.  Data completed include:    Geochemistry, texture, respiration, and enzyme activities  FTICR-MS organic matter chemistry  Microbial biomass C and N  TOC/TDN of water-extractable OM  X-ray computed tomography (derived metrics available here, raw data available upon request)  Metagenomes; a variety of data formats are available upon request  Soil hydraulic properties   Data in progress:    LC-MS/MS in development, timeline TBD, inquire for status   1000S_processed_BGC_summary.csv contains all available biogeochemical data; microbial biomass C and N; and TOC/TDN of water-extractable OM; and\u00a0  1000S_Tomography.xslx contains a summary of data generated via X-ray computed tomography.  icr_v2_corems2.csv contains FTICR-MS data processed by CoreMS version 2. These data are merged by formula across instrument runs to enable cross-sample comparisons. Technical replicates are merged by retaining peaks present in 2 out of 3 replicates.  1000Soils_Metadata_Site_Mastersheet_v1.csv contains site information.  Soil Hydraulics_corrected_02042025.xlsx contains soil hydraulics information.  Readme File_v4.xlsx is the readme file.  Please contact the MONet project (monet.emsl@pnnl.gov) or Emily Graham (emily.graham@pnnl.gov) with questions.  The following file and all raw data are\u00a0available upon request:  icr_by_mass_for_single_sample_analysis_only.csv\u00a0contains FTICR-MS data processed by CoreMS and is intended for usage in the calculation of biochemical transformations within samples only. These data are not acceptable for cross-sample comparison of masses because they are from multiple instrument runs.  For more information, please see: https://www.emsl.pnnl.gov/monet and https://sc-data.emsl.pnnl.gov/monet  Acknowledgment:\u00a0  Soil data were provided by the Molecular Observation Network (MONet) at the Environmental Molecular Sciences Laboratory (https://ror.org/04rc0xn13), a DOE Office of Science user facility sponsored by the Biological and Environmental Research program under Contract No. DE-AC05-76RL01830. The work (proposal: 10.46936/10.25585/60008970) conducted by the U.S. Department of Energy, Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science user facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.\u00a0  The Molecular Observation Network (MONet) database is an open, FAIR, and publicly available compilation of the molecular and microstructural properties of soil. Data in the MONet open science database can be found at\u00a0https://sc-data.emsl.pnnl.gov/.", "keywords": ["2. Zero hunger", "decomposition", "13. Climate action", "FTICR-MS", "biogeochemistry", "carbon", "molecular", "15. Life on land", "6. Clean water", "soil"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15328215"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15328215", "name": "item", "description": "10.5281/zenodo.15328215", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15328215"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-02T00:00:00Z"}}, {"id": "10.5281/zenodo.15680931", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:51Z", "type": "Journal Article", "created": "2025-06-15", "title": "Investigating the extent of PFAS contamination in the Upper Danube Basin across environmental compartments", "description": "Abstract                        Background             <p>Per- and polyfluoroalkyl substances (PFAS) are emerging organic pollutants widely detected in environmental systems, posing risks to human health and the ecosystem. Despite increasing efforts to monitor PFAS in river systems, knowledge gaps remain regarding sources and emissions via different pathways. This study investigates PFAS contamination across multiple environmental compartments in the Upper Danube Basin, including surface water, groundwater, wastewater, landfill leachate, surface runoff, and atmospheric deposition. The primary objectives are to assess the extent of PFAS contamination, identify key emission sources and transport pathways, and evaluate associated risks in terms of the potential exceedance of current and proposed environmental regulatory thresholds in the European Union.</p>                                   Results             <p>The findings reveal a widespread presence of PFAS, with PFOA, PFOS and short-chain compounds being predominant. The Alz River and Gendorf chemical park emerge as hotspots with far-reaching effects downstream, contributing significantly to diffuse legacy contamination of PFOA and being a significant source of two industrial PFOA substitutes, ADONA and GenX. Wastewater treatment plants, old municipal landfills, and sites with a history of fire-fighting foam application are identified as key pathways or sources of legacy pollution, exhibiting higher concentrations compared to the other matrices. Notably, no significant removal is observed when comparing influent and effluent samples from conventional WWTPs. The study further demonstrates that groundwater is vulnerable to contamination from point sources and to infiltration from rivers, with bank filtration proving largely ineffective in preventing PFAS contamination.</p>                                   Conclusions             <p>The study underscores the necessity for source and pathway control measures to mitigate PFAS pollution, the implementation of advanced treatment technologies to safeguard drinking water and surface water quality, and targeted remediation for legacy soil and groundwater contamination. Additionally, strong use regulations should be explored to minimize ongoing emissions. The multi-compartment monitoring proves to be a crucial approach to understand the complexity of PFAS distribution at the catchment scale. Comparative analysis and risk assessment highlight challenging situations for water management, offering an indispensable basis for emission modeling as a next step for quantitative assessment of the relevance of different sources and pathways for surface water pollution.</p>", "keywords": ["Emerging contaminants", "Emerging Pollutants", "PFAS", "Source identification", "Watershed management", "Environmental sciences", "Emission", "Water Framework Directive", "Environmental law", "Water pollution", "GE1-350", "K3581-3598", "Catchment monitoring", "Environmental Monitoring"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1186/s12302-025-01141-6.pdf"}, {"href": "https://doi.org/10.5281/zenodo.15680931"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Sciences%20Europe", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15680931", "name": "item", "description": "10.5281/zenodo.15680931", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15680931"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-06-15T00:00:00Z"}}, {"id": "10.5281/zenodo.15772619", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:52Z", "type": "Dataset", "title": "Dataset to: Foundation for an Austrian NIR Soil Spectral Library for Soil Health Assessments", "description": "Dataset description  This is the corresponding dataset to the publication 'Foundation for an Austrian NIR Soil Spectral Library for Soil Health Assessments' by Fohrafellner et al. (2025). In this publication, we created the first Near-Infrared (NIR) Austrian Soil Spectral Library (ASSL, 680 \u2013 2500 nm) using 2,129 legacy samples from all environmental zones of Austria. Additionally, we utilized partial least squares regression modeling to evaluate the dataset's current effectiveness for soil health assessments. The dataset contains three tabs, 'Document meta data', 'Legend' and 'Dataset'. Tab 'Document meta data' gives information on the authors, the data collection time frame, terms of use, etc. In 'Legend', each column of the 'Dataset' is described. The 'Dataset' contains information on the legacy soil samples including:\u00a0    meta data (e.g. sample number, sampling year, zip code, environmental zone, land use),   soil properties (soil organic carbon [SOC], SOC to clay ratio, total carbon, labile carbon, CaCO3, total nitrogen, plant available phosphorus, pH measured in CaCl2 and acetate, cation exchange capacity, texture [sand, silt, clay content], and clay content measured by density in suspension), and  measured NIR soil spectra, also for the standards.   Project description  This Austrian Soil Spectral Library was built within the ProbeField project (November 2021 \u2013 January 2025), which was part of the European Joint Program for SOIL \u2018Towards climate-smart sustainable management of agricultural soils\u2019 (EJP SOIL) funded by the European Union Horizon 2020 research and innovation programme (Grant Agreement N\u00b0 862695). The project aimed to create a protocol detailing procedures and methodologies for accurately estimating fertility-related properties in agricultural soils in the field. Additionally, the potential for extending this data to two- and three-dimensional mapping using co-variates was demonstrated. ProbeField further collected field spectra that closely match laboratory spectra, enabling the prediction of soil properties using models calibrated with soil spectral libraries.  References  Fohrafellner, J., Lippl, M., Bajraktarevic, A., Baumgarten, A., Spiegel, H., K\u00f6rner, R. and Sand\u00e9n, T.: Foundation for an Austrian NIR Soil Spectral Library for Soil Health Assessments, 2025, in review.", "keywords": ["EJP SOIL", "ProbeField", "Spectroscopy", " Near-Infrared", "data"], "contacts": [{"organization": "Fohrafellner, Julia", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15772619"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15772619", "name": "item", "description": "10.5281/zenodo.15772619", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15772619"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-07T00:00:00Z"}}, {"id": "10.5281/zenodo.15781488", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:53Z", "type": "Report", "title": "Results of stakeholder surveys on preferred NSWRM implementation plans. Deliverable D5.3 of the EU Horizon 2020 project OPTAIN.", "description": "Deliverable report D5.3 of the EU Horizon 2020 Project OPTAIN (Grant agreement No. 862756)    The objective of this deliverable is to convey OPTAIN\u2019s optimisation approach, methodologies and results to stakeholders of each case study\u2019s Multi-Actor Reference Groups. More importantly, it will create a common understanding of the potential of the NSWRMs for improving water and nutrient retention in the CS, as well as of the associated trade-offs such as costs and potential reductions in crop production. Finally, this task will determine those NSWRM implementation plans preferred by individual actors using the tool, ParetoPick-R, developed in the previous task 5.3. This sets the stage for the subsequent in-depth, cross-sectoral discussion about a spatially targeted implementation of NSWRM.    Summary\u00a0  This deliverable from the EU Horizon 2020 OPTAIN project presents the results from stakeholder interviews across eleven European case studies, focusing on the identification of preferred implementation plans for Natural/Small Water Retention Measures (NSWRMs).\u00a0It builds on the modelling and multi-objective optimisation workflows employed in OPTAIN, which explored numerous options for potential measure implementation optimised for environmental and economic objectives.  Stakeholders of each case study\u2019s Multi-Actor Reference Groups (MARG) participated in structured interviews. Using the interactive ParetoPick-R app, they developed a common understanding of the potential of NSWRMs and explored trade-offs among four optimisation objectives, such as water/nutrient retention, crop production, and cost. They then selected their preferred implementation plans based on weights assigned to each objective and filter options applied to the solution space.  Key Findings:    Trade-offs & preferences: Stakeholders' preferences varied significantly across sectors and case studies. Agricultural actors typically prioritised crop production and cost-efficiency, while those in the water and nature conservation sectors leaned towards environmental benefits.  Common measures: Frequently preferred NSWRMs included soil and/or crop management measures, followed by greening measures and engineered solutions.  Feasibility issues: Technical feasibility, land ownership, and institutional hurdles (e.g., need for permits) influenced stakeholder choices.  Tool feedback: The ParetoPick-R tool was generally well-received for visualising trade-offs and supporting decision-making. However, some users found it too complex and suggested improvements in usability, guidance, and map functionality.   This deliverable D5.3 sets the foundation for the final MARG workshops in the case studies, which will seek to negotiate compromise solutions that are acceptable to all actors. The report underscores the importance of participatory modelling tools and multi-sector engagement in water and land management planning.", "keywords": ["multiobjective optimisation", "trade-offs", "NSWRM", "agricultural production", "H2020", "OPTAIN", "SWAT", "NWRM", "stakeholder", "water retention"], "contacts": [{"organization": "Strauch, Michael, Wittekind, Cordula,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15781488"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15781488", "name": "item", "description": "10.5281/zenodo.15781488", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15781488"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-01T00:00:00Z"}}, {"id": "10.5281/zenodo.15797289", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:53Z", "type": "Dataset", "title": "Database of soil characteristics under specific pesticide management", "description": "Database of soil characteristics under specific pesticide management  Contributors: Mark\u00e9ta Mayerov\u00e1 and Veronika \u0158ez\u00e1\u010dov\u00e1  Affiliation: Czech Agrifood Research Center, Drnovsk\u00e1 507/73, CZ-160 00 Prague 6, Czech Republic  Database of soil characteristics will contribute to the realization of the project\u00b4s goal to identify appropriate and inappropriate pesticides from the point of the view of their impact on the non-target organisms and soil characteristics.  Field I.  The field experiment was established in 2024 in the experimental area of the Czech Agrifood Research Center in Prague \u2013 Ruzyn\u011b (previously Crop Research Institute). The experiment took place at the site of the experiment that had been running there since 2013 and included 5 different herbicide treatments in 4 replications (Mayerov\u00e1 et al. 2018)  The new trial area was split into 20 randomised plots with 2 different herbicide treatments in 8 replications and control without herbicides in 4 replications. Herbicide treatments differed in the mode of action (Table 1)  Table 1. Summary of the herbicides and active ingredients used in the trial. Classification Group by Herbicide Resistance Action Committee (HRAC).       herbicide     dose    formulation    active ingredient    content of a.i.    HRAC group    target weeds      Agritox 50 SL    1.5 l/ha    EC    MCPA    500 g/l    O    dicot      Glean 75 PX    15 g/ha    WG    chlorsulfuron    750 g/l    B    dicot + annual grasses       \u00a0  The area of each plot was 100 m2 and the 10 by 10 m plots were separated from field boundaries and from each other by 2 m on all sides to eliminate interaction between plots. Herbicides were applied post emergency in spring (April 26, 2024) from the tillering crop stage to the beginning of stem elongation (BBCH 21\u201331) by the Agrio-Napa 12 sprayer. Winter wheat was grown in the experimental field in 2024. At the beginning of March, it was mineral fertilized with LAD (ammonium nitrate with dolomite - NH4NO3\u00a0+\u00a0CaMg (CO3)2; 27 % N) at a dose 100 kg/ha.   Mixed disturbed soil samples for microbiological and physicochemical analyses were taken from the 0-15cm upper soil layer in each replication before herbicide application (April 24, 2024), 14 days after herbicide application (May 9, 2024) and 7 weeks after herbicide application (June 14, 2024). \u00a0A total of 20 soil samples were collected at each sampling. The soil samples were subsequently dried and sieved through a 2 mm sieve, thus simultaneously homogenised. The following soil properties were determined: pH (H2O), electric conductivity, available P and K, concentration NH4 and NO3, soil organic carbon, and total organic nitrogen content. Available P and K were assessed according to the Mehlich III method (Mehlich, 1984) on an Agilant ICP-OES 5110 VDV instrument. NO3 and NH4 were determined using calcium chloride solution as extractant according to ISO 14255:1998 on automated chemistry analyser SKALAR. Soil organic carbon and soil organic matter content were determined by sulfochromic oxidation according to ISO 14235:1998.   Field II  The field experiment was established in 2024 in the experimental area of the Czech Agrifood Research Center in Prague \u2013 Ruzyn\u011b (previously Crop Research Institute). The total area of the experiment is about 11 ha including the protective area around the entire experiment. The experimental area is divided into two halves, 120m wide and 300m long.\u00a0 One half was treated on June 17, 2024, with insecticide Decis forte (active ingredient deltamethrin) at a dose 62.5ml/ha, the other half was without insecticide treatment. Both areas are further divided into other halves. One half was treated on May 15, 2024, with herbicide Agritox (active ingredient MCPA) at a dose 1.5l/ha, the other was treated with hoeing only. We thus obtained 4 strips 60m wide with following treatment combinations: (A) herbicide + insecticide; (B) hoeing + insecticide; (C) hoeing; (D) herbicide. Spring wheat was grown in the experimental field in 2024. It was fertilized with mineral nitrogen at a dose of 150 kg N/ha before sowing and with 39 kg N/ha (DAM 390 - ammonium nitrate with urea) in the tillering phenophase.  In the middle of each strip (i.e. treatment), 8 sampling sites were marked in a row, 20 m apart from each other. Mixed disturbed soil samples for microbiological and physicochemical analyses were taken from the 0-15cm upper soil layer at each sampling site 14 days after herbicide application and 14 days after insecticide application. A total of 32 soil samples were collected at each sampling. Further sample processing was the same as for Field I.  The database will be gradually supplemented in the following years.   Funding: Development for this work is funded primarily by the Technology Agency of the Czech Republic, project SS07020100: \u201cThe impact of plant protection products on non-target biodiversity: soil microorganisms, invertebrates and wild plants\u201d, and the Ministry of Agriculture of the Czech Republic, institutional support MZE-RO0425.  The database was approved on September 2, 2025, by the Ministry of Agriculture of the Czech Republic.  References:  Mayerov\u00e1 M., Mikulka J., Soukup J. (2018): Effects of selective herbicide treatment on weed community in cereal crop rotation. Plant Soil Environ., 64: 413\u2013420. https://doi.org/10.17221/289/2018-PSE  \u00a0Mehlich A. (1984): Mehlich 3 Soil Test Extractant. A Modification of the Mehlich 2 Extractant. Commun. Soil Sci. Plant Anal. 15, 1409-1416. http://dx.doi.org/10.1080/00103628409367568.", "keywords": ["field trial", " herbicides", " insecticides", " soil properties"], "contacts": [{"organization": "Mayerov\u00e1, Mark\u00e9ta, \u0158ez\u00e1\u010dov\u00e1, Veronika,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15797289"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15797289", "name": "item", "description": "10.5281/zenodo.15797289", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15797289"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-03T00:00:00Z"}}, {"id": "10.5281/zenodo.16017208", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:54Z", "type": "Dataset", "title": "Cashew orchard soil properties, Dodamarg, Northern Western Ghats, India", "description": "Soil properties of cashew orchards of the Northern Western Ghats, India  This project contains chemical properties of soil collected from cashew orchards of Dodamarg, Northern Western Ghats, for a study investigating the factors influencing the effects of forest cover, flower abundance, temperature and (potentially) soil composition on cashew pollinators.  Taxonomic Coverage:\u00a0Not applicable  Geographic Coverage: Dodamarg, Sindhudurg District, Maharashtra, India  Temporal Coverage: March 2025  \u00a0  Description of field and lab methods  Soil collection: Soil samples were collected from 30 cashew orchards, using soil core sampler. The diameter of the core sampler was measured before soil collection. All soil samples were collected from 10 cm depth after removing all the leaf litter from the ground. From each orchard, 10 soil columns were collected for analysis of chemical properties.  Chemical Properties: We estimated thirteen soil chemical properties for all soil samples collected. The following parameters were analyzed by Zuari Farmhubs Laboratory: pH, electrical conductivity (E.C.) at 25\u00b0C, organic carbon (O.C.), available phosphorus (P\u2082O\u2085), available potassium (K\u2082O), available calcium (Ca), magnesium (Mg), sulfur (S), boron (B), zinc (Zn), iron (Fe), copper (Cu), and manganese (Mn).  More details about the data can be obtained from Aditya Satish (adityasatish@ncf-india.org) and Rohit Naniwadekar (rohit@ncf-india.org) from the Nature Conservation Foundation (www.ncf-india.org).  File Descriptions:  Data file: Dodamarg_2025_Cashew_Soil_Properties.csv  We have also included a ReadMe.txt file that explains the data file, akin to the description in the metadata.  Description of the columns of the data file:    Sl no: Serial number  Site: Site ID  Code: Site code (General location)  Latitude: latitude co-ordinate of the plot (in decimal degrees, \u00b0N)  Longitude: longitude co-ordinate of the plot (in decimal degrees, \u00b0E)  pH: pH of the soil  E.C.: Electrical Conductivity at 25\u00b0C (in dS/m)  O.C.: Organic Carbon (in %)  P\u2082O\u2085: Available P\u2082O\u2085 (in Kg /acre)  K\u2082O: Available Potassium (in Kg /acre)  Ca: Available Calcium (in mg/Kg)  Mg: Available Magnesium (in mg/Kg)  S: Available Sulphur (in mg/Kg)  B: Available Boron (in mg/Kg)  Zn: Available Zinc (in mg/Kg)  Fe: Available Iron (in mg/Kg)  Cu: Available Copper (in mg/Kg)  Mn: Available Manganese (in mg/Kg)   Funding:\u00a0  Godrej Consumer Products Limited  Arvind Datar  Rohini Nilekani Philanthropies", "keywords": ["Soil chemical properties", "Cashew orchards", "Ecology", "FOS: Biological sciences", "Northern Western Ghats"], "contacts": [{"organization": "Sadekar, Vishal, Satish, Aditya, Naniwadekar, Rohit,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.16017208"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.16017208", "name": "item", "description": "10.5281/zenodo.16017208", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.16017208"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-17T00:00:00Z"}}, {"id": "10.5281/zenodo.16261617", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:54Z", "type": "Dataset", "title": "Dataset to: Austrian NIR Soil Spectral Library for Soil Health Assessments", "description": "Dataset description  This is the corresponding dataset to the publication 'Austrian NIR Soil Spectral Library for Soil Health Assessments' by Fohrafellner et al. (2025). In this publication, we created the first Austrian Near-Infrared (NIR) Soil Spectral Library (680 \u2013 2500 nm) using 2,129 legacy samples from all environmental zones of Austria. Additionally, we utilized partial least squares regression modeling to evaluate the dataset's current effectiveness for soil health assessments. The dataset contains three tabs, 'Document meta data', 'Legend' and 'Dataset'. Tab 'Document meta data' gives information on the authors, the data collection time frame, terms of use, etc. In 'Legend', each column of the 'Dataset' is described. The 'Dataset' contains information on the legacy soil samples including:\u00a0    meta data (e.g. sample number, sampling year, zip code, environmental zone, land use),   soil properties (soil organic carbon [SOC], SOC to clay ratio, total carbon, labile carbon, CaCO3, total nitrogen, plant available phosphorus, pH measured in CaCl2 and acetate, cation exchange capacity, texture [sand, silt, clay content], and clay content measured by density in suspension), and  measured NIR soil spectra, also for the standards.   Project description  This Austrian NIR Soil Spectral Library was built within the ProbeField project (November 2021 \u2013 January 2025), which was part of the European Joint Program for SOIL 'Towards climate-smart sustainable management of agricultural soils' (EJP SOIL) funded by the European Union Horizon 2020 research and innovation programme (Grant Agreement N\u00b0 862695). The project aimed to create a protocol detailing procedures and methodologies for accurately estimating fertility-related properties in agricultural soils in the field. Additionally, the potential for extending this data to two- and three-dimensional mapping using co-variates was demonstrated. ProbeField further collected field spectra that closely match laboratory spectra, enabling the prediction of soil properties using models calibrated with soil spectral libraries.  References  Fohrafellner, J., Lippl, M., Bajraktarevic, A., Baumgarten, A., Spiegel, H., K\u00f6rner, R. and Sand\u00e9n, T.: Austrian NIR Soil Spectral Library for Soil Health Assessments, 2025, in review.", "keywords": ["EJP SOIL", "ProbeField", "spectroscopy", "data", "near-infrared"], "contacts": [{"organization": "Fohrafellner, Julia, Lippl, Maximilian, Bajraktarevic, Armin, Baumgarten, Andreas, Spiegel, Heide, K\u00f6rner, Robert, Sand\u00e9n, Taru,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.16261617"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.16261617", "name": "item", "description": "10.5281/zenodo.16261617", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.16261617"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-21T00:00:00Z"}}, {"id": "10.5281/zenodo.17941270", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:20:59Z", "type": "Dataset", "title": "Dataset to: Austrian NIR Soil Spectral Library for Soil Health Assessments", "description": "Dataset description  This is the corresponding dataset to the publication 'Austrian NIR Soil Spectral Library for Soil Health Assessments' by Fohrafellner et al. (2025). In this publication, we created the first Austrian Near-Infrared (NIR) Soil Spectral Library (680 \u2013 2500 nm) using 2,129 legacy samples from all environmental zones of Austria. Additionally, we utilized partial least squares regression modeling to evaluate the dataset's current effectiveness for soil health assessments. The dataset contains three tabs, 'Document meta data', 'Legend' and 'Dataset'. Tab 'Document meta data' gives information on the authors, the data collection time frame, terms of use, etc. In 'Legend', each column of the 'Dataset' is described. The 'Dataset' contains information on the legacy soil samples including:\u00a0    meta data (e.g. sample number, sampling year, zip code, environmental zone, land use),   soil properties (soil organic carbon [SOC], SOC to clay ratio, total carbon, labile carbon, CaCO3, total nitrogen, plant available phosphorus, pH measured in CaCl2 and acetate, cation exchange capacity, texture [sand, silt, clay content], and clay content measured by density in suspension), and  measured NIR soil spectra, also for the standards.   Project description  This Austrian NIR Soil Spectral Library was built within the ProbeField project (November 2021 \u2013 January 2025), which was part of the European Joint Program for SOIL 'Towards climate-smart sustainable management of agricultural soils' (EJP SOIL) funded by the European Union Horizon 2020 research and innovation programme (Grant Agreement N\u00b0 862695). The project aimed to create a protocol detailing procedures and methodologies for accurately estimating fertility-related properties in agricultural soils in the field. Additionally, the potential for extending this data to two- and three-dimensional mapping using co-variates was demonstrated. ProbeField further collected field spectra that closely match laboratory spectra, enabling the prediction of soil properties using models calibrated with soil spectral libraries.  References  Fohrafellner, J., Lippl, M., Bajraktarevic, A., Baumgarten, A., Spiegel, H., K\u00f6rner, R. and Sand\u00e9n, T.: Austrian NIR Soil Spectral Library for Soil Health Assessments, 2025, in review.", "keywords": ["EJP SOIL", "ProbeField", "spectroscopy", "data", "near-infrared"], "contacts": [{"organization": "Fohrafellner, Julia, Lippl, Maximilian, Bajraktarevic, Armin, Baumgarten, Andreas, Spiegel, Heide, K\u00f6rner, Robert, Sand\u00e9n, Taru,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.17941270"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.17941270", "name": "item", "description": "10.5281/zenodo.17941270", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.17941270"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-21T00:00:00Z"}}, {"id": "10.5281/zenodo.4487144", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:21:04Z", "type": "Dataset", "title": "Eddy Covariance data from ICOS-associated station IT-NIV \u2013 August-November 2019", "description": "RestrictedData stored here refer to Eddy Covariance (EC) data measured in 2019 between August and November at the Alpine CZO (Critical Zone Observatory, hereafter CZO@Nivolet) which was established at the Nivolet Plain (Piani del Nivolet) in the Gran Paradiso National Park (GPNP), located in the western Italian Alps. The EC site (IT-NIV) is an ICOS-associated station. CZO@Nivolet is aimed at investigating the cross-scale interactions between climatic shifts and ecosystem functions multiple scales, involving multidisciplinary studies. The main research questions that we aim to answer are concerning: (a) the effect of bedrock lithology, soil physics and chemisty, topographic hetereogenity, biotic components and meteo-climatic parameters in modulating CO<sub>2</sub> flux in alpine grassland; and (b) what are the controlling factors of organic C and weathering under geologic substrates and different topographic positions. The investigations started in 2017. In 2019, the EC tower was added to deeply study CO<sub>2</sub>, H<sub>2</sub>0, latent and sensible heat exchanges between soil, vegetation, and atmosphere. Carbon dioxide fluxes and environmental variables are recorded during the snow-free season to estimate carbon storage and explore CO<sub>2</sub> fluxes drivers in high-altitude grasslands. Further developments will regard the integration of different techniques (Eddy Covariance, Remote Sensing, Flux chambers) to improve both spatial and temporal extent of carbon fluxes estimates to finally assess grasslands' productivity.", "keywords": ["13. Climate action", "alpine grassland", "15. Life on land", "Gran Paradiso National Park", "Mountain", "EO_Data", "Eddy Covariance", "Net Ecosystem Exchange", "ecosystem-atmosphere carbon exchange"], "contacts": [{"organization": "Vivaldo, Gianna, Raco, Brunella, Baneschi, Ilaria, Giamberini, Maria Silvia,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.4487144"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.4487144", "name": "item", "description": "10.5281/zenodo.4487144", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.4487144"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-05-20T00:00:00Z"}}, {"id": "10.5281/zenodo.5574882", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:21:05Z", "type": "Report", "created": "2020-03-09", "title": "Hyperspectral imaging for high resolution mapping of soil profile organic carbon distribution in an Austrian Alpine landscape", "description": "<p>         &amp;lt;p&amp;gt;Studies on soil organic carbon (SOC) stocks mostly focus on topsoils (&amp;lt; 30 cm). However, 30 to 63% of the SOC are stored in the subsoils (30 to 100 cm), and the factors controlling SOC storage in subsoils may be substantially different than in topsoils. The low mean SOC content in subsoils makes its quantification and characterization challenging. Thus, new approaches are required to depict the SOC stocks distribution in full soil profile. Hyperspectral imaging of soil core samples can provide high spatial resolution of the vertical distribution of SOC in a soil profile. The main objective of the ongoing study, within the Horizon 2020 European Project Circular Agronomics, is to apply laboratory hyperspectral imaging with a variety of machine learning approaches for the mapping of OC distribution in undisturbed soil cores. Soil cores were collected down to a depth of one meter in grasslands of 15 organic farms located in the Lungau Valley, in Austria. Some samples were divided into five depths in the field for classical bulk soil measurements (total carbon and nitrogen, texture, pH, EC and bulk density) on disturbed samples. Undisturbed soil cores were sliced vertically for laboratory hyperspectral imaging in the range of Vis-NIR (400-1000 nm). We were able to reveal the hotspots of OC and map the OC distribution in soil profile by applying a variety of machine learning approaches (i.e. partial least square and random forest regression) as a function of spectral responses. A digital elevation model was further exploited to investigate the effects of topographical factors such as elevation, aspect and slope on SOC profile distribution. Landsat 8 data were also used to depict the spatial variability of land insensitive cover/vegetation in study area.&amp;lt;/p&amp;gt;         </p>", "keywords": ["2. Zero hunger", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Vis-NIR imaging spectroscopy", " Alpine grassland", " Digital elevation model", " Subsoils"], "contacts": [{"organization": "YASER OSTOVARI, K\u00f6ppend\u00f6rfer, Baptist, Guigue, Julien, Van Groenigen, Jan Willem, Creamer, Rachel, Guggenberger, Thomas, Grassauer, Florian, Hobley, Eleanor, Ferron, Laura, Martens, Henk, K\u00f6gel-Knabner, Ingrid, Vidal, Alix,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.5574882"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.5574882", "name": "item", "description": "10.5281/zenodo.5574882", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.5574882"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-23T00:00:00Z"}}, {"id": "10.5281/zenodo.6202061", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:21:07Z", "type": "Dataset", "title": "Bias-corrected EURO-CORDEX RCM simulations for the OPTAIN case studies", "description": "Open AccessBias-corrected EURO-CORDEX RCM simulations are available on a daily timescale for: -period 1981-2099/2100, -6 RCM, -3 scenarios (RCPs 2.6, 4.5 and 8.5), -7 variables (mean, minimum and maximum temperature, precipitation, solar radiation, wind speed at 2 m and relative humidity) and -18 domains and 23 locations within these domains. Bias correction and further downscaling to 0.1\ufffd\ufffd was done using ERA5-Land reanalysis data with non-parametric empirical quantile mapping. Moreover, the interpolation of gridded bias-corrected climate model simulations to the locations was made using universal kriging. <strong>Organization of the data</strong> The name of the files are <em>domain</em>-<em>type</em>.zip, where <em>type</em> is gridded (NetCDF) or point (csv). Each zip file contains multiple files, organized in subfolders: <em>experiment</em>/<em>modelNumber</em>/<em>variable</em>.nc for gridded and <em>experiment</em>/<em>modelNumber</em>/<em>variable-pilotFieldNumber</em>.txt for point data, where <em>experiment </em>is rcp26, rcp45 or rcp85. <em>domain and pilotFieldNumber</em> <strong>domain</strong> <strong>domain </strong><strong>location (min and max. Longitude, min and max latitude</strong><strong>)</strong> <strong>pilotFieldNumber</strong> <strong>pilot field </strong><strong>location (longitude, latitude)</strong> <strong>case study</strong><strong> number</strong> <strong>country</strong> <strong>Name (OPTAIN case study)</strong> 01 50.95 51.45 14.55 15.05 1 DEU Schoeps 02 46.35 47.05 6.55 7.15 2 46.816667 6.95 2 CHE Petite Glane 02_1 46.75 47.25 7.25 7.75 1 46.983333 7.466667 02_34 47.35 47.85 8.35 3 4 47.433333 8.516667 47.683333 8.616667 02_5 46.15 46.65 5.95 6.45 5 46.4 6.233333 03a 46.65 47.15 17.45 17.95 1 2 3 4 46.92649 17.68246 46.9166 17.68976 46.91283 17.69754 46.91283 17.69723 3a HUN Csorsza 03b 46.45 46.95 16.65 17.15 3b HUN Felso Valicka 04 52.35 52.85 18.45 18.95 1 52.597469 18.728617 4 POL Upper Zglowiaczka 05 46.35 46.85 15.35 15.85 5 SVN Pesnica 06 46.45 46.95 16.15 16.65 6 HUN/SVN Kebele/Kobiljski 07 49.85 50.35 4.75 5.25 7 BEL La Wimbe 08 55.15 55.75 23.55 24.05 1 2 55.522057 23.799235 55.42233194 23.82580339 8 LTU Dotnuvele 09 45.45 45.95 9.65 10.15 9 ITA Cherio 10 59.45 59.95 10.75 11.25 1 2 3 4 5 6 7 8 59.71949 10.83576 59.6833306 10.8833298 59.6833306 10.8833298 59.665 10.9475 59.665 10.9475 59.841012 10.903597 59.757631 11.072031 59.539623 10.856447 10 NOR Krogstad 11 46.45 46.95 17.55 18.05 1 2 46.658333 17.75583 46.656944 17.75833 11 HUN Tetves 12 49.35 49.85 14.75 15.25 1 49.616837 15.078266 12 CZE Cechticky 13 55.85 56.35 25.85 26.45 13 LVA Dviete 14 59.75 60.25 17.55 18.05 14 SWE Ingvastaan Lehstaan <em>modelNumber</em> <strong>modelNumber</strong> <strong>Driving Model (GCM)</strong> <strong>Ensemble</strong> <strong>RCM </strong> <strong>End date</strong> 1 EC-EARTH r12i1p1 CCLM4-8-17 31.12.2100 2 EC-EARTH r3i1p1 HIRHAM5 31.12.2100 3 HadGEM2-ES r1i1p1 HIRHAM5 30.12.2099 4 HadGEM2-ES r1i1p1 RACMO22E 30.12.2099 5 HadGEM2-ES r1i1p1 RCA4 30.12.2099 6 MPI-ESM-LR r2i1p1 REMO2009 31.12.2100 <em>variable</em> <strong>variable</strong> <strong>description</strong> <strong>Unit</strong> Tmean Mean temperature \ufffd\ufffdC Tmin Min temperature \ufffd\ufffdC Tmax Max temperature \ufffd\ufffdC prec Precipitation mm solarRad Solar radiation MJ/m2 windSpeed Wind speed at 2m m/s relHum Relative humidity % <strong>Methodolody</strong> Bias correction was done using non-parametric empirical quantile mapping with modified method from R package qmap. Parameters selected were: corrections for each day of the year using a moving windows for a 31 days; 100 quantiles; wet days corrections for precipitation. The reference period is 1981-2010. The interpolation of gridded bias-corrected climate model simulations to the location was made using universal kriging with R packages automap and gstat with (external) variables x, y, x2, y2, x*y, z, where x is latitude, y is longitude, and z is elevation. For Digital Elevation Model Shuttle Radar Topography Mission was used. If there was an error using above mentioned variables, the number of variables was reduced to x, y, x*y, z and if there was still an error to x, y, z. <strong>Funding</strong> This project has received funding from the European Union\ufffd\ufffd\ufffds Horizon 2020 research and innovation programme under grant agreement No 862756.", "keywords": ["CORDEX", "13. Climate action", "RCM", "ERA5-Land", "OPTAIN", "EURO-CORDEX", "bias correction"], "contacts": [{"organization": "Honzak, Luka", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6202061"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6202061", "name": "item", "description": "10.5281/zenodo.6202061", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6202061"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-21T00:00:00Z"}}, {"id": "10.5281/zenodo.6380872", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:21:07Z", "type": "Journal Article", "title": "Optimization of a hemolymph protein extraction method from native polyacrylamide gel", "description": "<strong>INTRODUCTION:</strong> Although there are indications that insect-based proteins may have potential biomedical applications (anticancer and antimicrobial), as well as in cellular agriculture (food and feed), they have not been sufficiently investigated. The hemolymph of insect larvae is protein-rich, particularly in storage proteins that are involved in amino acid metabolism and protein synthesis. In order to characterize these proteins, the first step is their successful isolation. Using diapausing 5th instar larvae of the economically important European corn borer moth (ECB) <em>Ostrinia nubilalis </em>(Hbn.) as a model system, in this study we optimized a method for isolating individual native hemolymph proteins from polyacrylamide gels and we performed initial tests of isolated proteins bioactivity. <strong>OBJECTIVES:</strong> The main objective in this study was to optimize an easy and affordable method for isolation of individual hemolymph proteins in the native state, without the use of chemicals that would affect their structure and function (e.g. sodium dodecyl sulfate, SDS). This allows further testing of these proteins for biomedical and application in cellular agriculture, and further work with isolated proteins in downstream in vitro proteome research, which will bring new knowledge and directions for different in silico proteome research. <strong>METHOD / DESIGN: </strong>Hemolymph was collected from diapausing 5th instar ECB larvae, after which hemocytes were removed from the hemolymph by centrifuging the samples for 30 min. at 16 000 g. Hemolymph proteins were separated by native polyacrylamide gel electrophoresis (PAGE) on a customized discontinuous gel without a well comb, using the BIO-RAD Mini-PROTEAN\ufffd\ufffd Tetra cell. <br> In order to determine the position of protein fractions of interest on the gel after electrophoresis, thin vertical strips were cut from the sides of the polyacrylamide gel and stained with Coomassie Brilliant Blue, after which the same gel strips were destained. The strips were placed next to the original gels and 5 protein fractions were cut from the unstained part of the polyacrylamide gel, chopped and transferred to microtubes. Ultrapure water was added to the tubes and they were placed on the Biometra TSC ThermoShaker overnight at 30\ufffd\ufffdC to elute the proteins from the gels. After elution, the protein samples were centrifuged for 15 min. at 10 000 g. The concentration of isolated proteins was determined by measuring the absorbance at 230 nm using the Shimadzu BioSpec-nano, with a serial dilution of bovine \ufffd\ufffd-globulin used as the protein standard. To confirm that the proteins were well isolated, the individual fractions were run in duplicate wells on discontinuous native PAGE using the BIO-RAD Mini-PROTEAN\ufffd\ufffd 3 Cell, after which the gels were stained, destained and imaged. Finally, the effect of successfully isolated proteins on MRC-5 cell viability was examined using an MTT assay. <strong>RESULTS: </strong>Five distinct protein fractions were detected after the first native PAGE (P1-P5). After elution from the gel, these fractions and the method for their isolation were validated with a second native PAGE. Regarding the testing of isolated protein bioactivity, the results of the MTT assay indicate an antiproliferative effect of all 5 protein fractions, especially in the P4 fraction. <strong>CONCLUSIONS: </strong>The insect hemolymph protein extraction method optimized in this study proved to be simple and successful and could potentially be applied to other insect species as well. Also, the structure and function of the proteins remained intact during the isolation process, which allows further use of the isolated proteins in downstream in vitro proteome research, the results of which will contribute to protein identification and in silico proteome research based on different bioinformatics tools (e.g. protein-protein interaction analysis, in silico bioactivity analyses, etc.). Finally, since the isolated proteins showed antiproliferative effects on the selected cell line, their anticancer and antimicrobial activity will be further tested.", "keywords": ["insects; hemolymph proteins; native PAGE; protein isolation; proteomics"], "contacts": [{"organization": "Teodora, Kne\u017ei\u0107, Milo\u0161, Avramov, \u017deljko, Popovi\u0107 D., Ljiljana, Janju\u0161evi\u0107, Mila, Djisalov, Ivana, Gadjanski,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6380872"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Book%20of%20Abstracts%20-%20Bioscience%20Conference%20and%20the%208th%20International%20PSU%20%E2%80%93%20UNS%20Bioscience%20Conference%20%28IBSC2021%29", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6380872", "name": "item", "description": "10.5281/zenodo.6380872", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6380872"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.5281/zenodo.8407642", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:21:21Z", "type": "Report", "title": "Shedding light on the genetic diversity and evolutionary dynamics of geographic populations of Wisteria vein mosaic virus: a case study for the spread of emerging potyviruses in Europe?", "description": "Wisteria vein mosaic virus (WVMV) is a member of the genus Potyvirus associated with Wisteria mosaic disease (WMD), the most serious disease affecting Wisteria spp. In 2022, severe symptoms of WMD were observed on the leaves of a Chinese wisteria (W. sinensis) tree growing in an urban area in Apulia (Italy). The presence of WVMV was ascertained by RT-PCR analysis. Although the occurrence of WVMV in Italy had been posited in the late 1960s, no molecular information had been reported for any Italian isolate prior to this study. Subsequent phylogenetic analyses based on NIb and CP genes placed the WVMV Italian isolate within a large clade identified in the genus Potyvirus as the BCMV supergroup. Based on the increasing number of reports of the virus worldwide, we attempted an exploratory analysis of its genetic diversity and possible mechanisms that may have shaped its geographic population structure. Relying on the N-terminus of the CP, available for twenty WVMV isolates from Europe, Asia, and Oceania, sixteen different haplotypes were identified. A high haplotype diversity was found, particularly relevant in the European population. The measured dN/dS ratio led to the assumption that the target region is under purifying selection. Tests evaluating the neutrality of nucleotide variability showed different results for the European and Asian groups. The estimation of inter-population genetic differentiation showed a high level of gene flow between the two populations. Overall, our results provide a possible approach to understanding the mechanisms of WVMV emergence in Europe and draw attention to its further spread and the increasing threat of this and other neglected potyvirus species to the ornamental nursery sector.", "keywords": ["WVMV; selection pressure; population genetics; genetic diversity; gene flow; haplotype diversity; neutrality tests; FastME phylogeny", "3. Good health"], "contacts": [{"organization": "G. D'Attoma, A. Minafra", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.8407642"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.8407642", "name": "item", "description": "10.5281/zenodo.8407642", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.8407642"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-09-18T00:00:00Z"}}, {"id": "10.7910/DVN/GVNJAB", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:21:49Z", "type": "Dataset", "created": "2019-06-24", "title": "Physical topsoil  properties in Murugusi, Western Kenya", "description": "Open Access&lt;b&gt;General:&lt;/b&gt; Lab determined topsoil bulk density, contents of sand, clay and organic carbon in Murugusi, W. Kenya, together with spatial coordinates of where the soil samples were taken (rounded to the closest center point of a 250 m \u00d7 250 m raster). All lab analyses were carried out at the ILRI/CIAT lab in Nairob, Kenya.  &lt;br&gt;  &lt;b&gt;Soil sampling:&lt;/b&gt; At each sample location, one composite topsoil sample was taken; three cores of 7 cm in diameter taken within an area of one square meter. The soil was taken from 0-0.2 m depth below any organic (O) horizon.   &lt;br&gt;  &lt;b&gt;Determination of soil properties:&lt;/b&gt; The bulk density of the soil was determined by taking two undisturbed soil samples (0-10 cm and 10-20 cm depth) of known volume (100 cm2) and weighting them after air drying. Soil fractions of clay (&lt;0.002 mm) and sand (0.05-2 mm) were determined by the hydrometer method (Estefan et al., 2014), using 10% sodium hexametaphosphate as the dispersing agent. Soil pH was determined potentiometrically on a soil suspension of 1:2 (soil: water). Total carbon was measured after dry combustion using an elemental analyser (Elementar Vario max cube; ISO 10694, first edition 1995-03-01)  &lt;br&gt;  &lt;b&gt;Reference: &lt;/b&gt;Estefan G., Sommer R., Ryan J. (2014) Analytical Methods for Soil-Plant and Water in Dry Areas. A Manual of Relevance to the West Asia and North Africa Region. 3rd Edition, International Center for Agricultural Research in the Dry Areas, Aleppo, 255 pp. Available online at: http://repo.mel.cgiar.org:8080/handle/20.500.11766/7512?show=full. Verified: October 9, 2018.  &lt;br&gt;  &lt;b&gt;Acknowledgements: &lt;/b&gt; We are deeply thankful for the good services provided by John Mukulama (soil sampling), John Yumbya Mutua (soil sampling) and Francis Mungthu Njenga (lab analyses) The project was carried out within the CGIAR Research Program on Water, Land and Ecosystems (WLE).", "keywords": ["Soil organic matter", "Agricultural Sciences", "Soil organic carbon", "sand", "Kenya", "Carbon", "Latin America and the Caribbean", "soil", "Soil", "Soil bulk density", "Sand", "soil organic matter", "Earth and Environmental Sciences", "Soil texture", "Murugusi", "Africa", "Clay", "Texture", "Western Kenya", "Agroecosystems and Sustainable Landscapes - ASL"], "contacts": [{"organization": "Piikki, Kristin, S\u00f6derstr\u00f6m, Mats, Sommer, Rolf, Da Silva, Mayesse,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.7910/DVN/GVNJAB"}, {"rel": "self", "type": "application/geo+json", "title": "10.7910/DVN/GVNJAB", "name": "item", "description": "10.7910/DVN/GVNJAB", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.7910/DVN/GVNJAB"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-01-01T00:00:00Z"}}, {"id": "10.7910/DVN/HXAH87", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:21:49Z", "type": "Dataset", "title": "Arbuscular and ectomycorrhizal fungi diversity in the Indian subcontinent", "description": "Mycorrhizal fungi (MF) are below-ground organisms playing a key role in terrestrial ecosystems as they regulate nutrient and carbon cycles, and influence soil structure and ecosystem multifunctionality. Arbuscular and ectomycorrhizal fungi are the two mycorrhizal types most relevant to worldwide ecosystems, but areas like the Indian sub-continent remain under-represented in global maps. The dataset presented here reports the available information regarding arbuscular and ectomycorrhizal fungi diversity in cultivated and natural ecosystems of the Indian subcontinent. We have selected studies published in English in ISI Web of Science during the years 2005 - 2020 that provided a taxonomic classification of MF and their associated abundance in terms of percentage of root colonization or number of spores per quantity of soil. From the screening of 74 studies, we have recorded: i. the scientific or common name of the plant or the generic habitat sampled for MF identification; ii the MF genus and species; iii. the location of the study with associated altitude and geographic coordinates; iv. main soil physico-chemical properties (soil pH, texture, organic Carbon, Total Nitrogen, available Phosphorus); climatic variables such as mean annual precipitation and temperature.&lt;br&gt;&lt;br&gt;", "keywords": ["ecosystem management", "Asia", "Agricultural Sciences", "CGIAR Research Program on Water", " Land and Ecosystems", "Multifunctional Landscapes", "gesti\u00f3n de ecosistemas", "soil biology", "MYCORRHIZAE", "CGIAR Research Program", "Earth and Environmental Sciences", "SOIL BIOLOGY", "BIODIVERSITY", "mycorrhizae", "biolog\u00eda del suelo"], "contacts": [{"organization": "Beggi, Francesca, Dasgupta, Debarshi,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.7910/DVN/HXAH87"}, {"rel": "self", "type": "application/geo+json", "title": "10.7910/DVN/HXAH87", "name": "item", "description": "10.7910/DVN/HXAH87", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.7910/DVN/HXAH87"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.7910/DVN/ZTMDUR", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:21:50Z", "type": "Dataset", "created": "2005-01-01", "title": "Pilot Analysis of Global Ecosystems (PAGE), Agroecosystems dataset", "description": "&lt;br&gt;The Pilot Analysis of Global Ecosystems (PAGE): Agroecosystems was one of four pilot studies undertaken as precursors to the Millennium Ecosystem Assessment. The study identifies linkages between crop production systems and environmental services such as food, soil resources, water, biodiversity, and carbon cycling, in the hopes that a better understanding of these linkages might lead to policies that can contribute both to improved food output and to improved ecosystem service provision. Th e PAGE Agroecosystems report includes a series of 24 maps that provide a detailed spatial perspective on agroecosystems a nd agroecosystem services. Pilot Analysis of Global Ecosystems (PAGE): Agroecosystems Dataset offers the 9 geospatial datasets used to build these maps. &lt;/br&gt;  &lt;br&gt;The datasets are:&lt;/br&gt;  &lt;br&gt;PAGE Global Agricultural Extent. The data describe the location and extent of global agriculture and are derived from GLLCCD 1998; USGS EDC1999a.&lt;/br&gt;  &lt;br&gt;PAGE Global Agricultural Extent version 2. The data are an update of the original PAGE Global Agricultural Extent, based on version 2 of the Global Land Cover Characteristics Dataset (GLCCD v2.0, USGS/EDC 2000). The methods used to create this dataset were the same as those employed to create the origina l PAGE Global Agricultural Extent.&lt;/br&gt;  &lt;br&gt;Mask of the Global Extent of Agriculture. This dataset displays the global extent of agricultural areas as defined by the PAGE study. The other datasets made available on this site (eg. tree cover, soil carbon, area free of soil constraints) only show values for areas within this agricultural extent.&lt;/br&gt;  &lt;br&gt;PAGE Global Agroecosystems. These data characterize agroecosystems, defined as 'a biological and natural resource system managed by humans for the primary purpose of producing food as well as other socially valuable nonfood products and environmental services.' &lt;/br&gt;  &lt;br&gt;Percentage Tree Cover within the Extent of Agriculture. This is a raster dataset that shows the proportion of land area within the PAGE agricultural extent that is occupied by 'woody vegetation' (mature vegetation whose approximate height is greater than 5 meters).&lt;/br&gt;  &lt;br&gt;Carbon Storage in Soils within the PAGE Agricultural Extent. The data give a global estimate of soil organic carbon storage in agricultural lands, calculated by applying Batjes' (1996 and 2000) soil organic carbon content values by soil type area share of each 5 x 5 minute of the Digital Soil Map of the World (FAO 1995). &lt;/br&gt;  &lt;br&gt;Agriculture Share of Watershed. This dataset depicts agricultural area as a share of total watershed area. The share of each watershed that is agricultural was calculated by applying a weighted percentage to each PAGE agricultural land cover class.&lt;/br&gt;  &lt;br&gt;Area Free of Soil Constraints. The data show the proportional area within the PAGE agricultural extent that is free from soil constraints. The area free of soil constraints is based on fertility capability classification (FCC) app lied to FAO's Digital Soil Map of the World (1995).&lt;/br&gt;  &lt;br&gt;Outline of Land and Water Area. These data are used to provide a boundary for land areas and facilitate the readability of maps.&lt;/br&gt;", "keywords": ["Pilot Analysis of Global Ecosystems (PAGE)", "Agroecosystems"], "contacts": [{"organization": "Wood, Stanley, Sebastian, Kate, Scherr, Sara,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.7910/DVN/ZTMDUR"}, {"rel": "self", "type": "application/geo+json", "title": "10.7910/DVN/ZTMDUR", "name": "item", "description": "10.7910/DVN/ZTMDUR", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.7910/DVN/ZTMDUR"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-01-01T00:00:00Z"}}, {"id": "11369/372709", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:22:11Z", "type": "Journal Article", "created": "2018-09-07", "title": "Soil resources and element stocks in drylands to face global issues", "description": "Abstract<p>Drylands (hyperarid, arid, semiarid, and dry subhumid ecosystems) cover almost half of Earth\uffe2\uff80\uff99s land surface and are highly vulnerable to environmental pressures. Here we provide an inventory of soil properties including carbon (C), nitrogen (N), and phosphorus (P) stocks within the current boundaries of drylands, aimed at serving as a benchmark in the face of future challenges including increased population, food security, desertification, and climate change. Aridity limits plant production and results in poorly developed soils, with coarse texture, low C:N and C:P, scarce organic matter, and high vulnerability to erosion. Dryland soils store 646 Pg of organic C to 2\uffe2\uff80\uff89m, the equivalent of 32% of the global soil organic C pool. The magnitude of the historic loss of C from dryland soils due to human land use and cover change and their typically low C:N and C:P suggest high potential to build up soil organic matter, but coarse soil textures may limit protection and stabilization processes. Restoring, preserving, and increasing soil organic matter in drylands may help slow down rising levels of atmospheric carbon dioxide by sequestering C, and is strongly needed to enhance food security and reduce the risk of land degradation and desertification.</p", "keywords": ["2. Zero hunger", "0301 basic medicine", "Conservation of Natural Resources", "0303 health sciences", "Multidisciplinary", "Nitrogen", "Climate", "Climate Change", "Phosphorus", "15. Life on land", "Article", "Carbon", "Food Supply", "Soil", "03 medical and health sciences", "element cycles", "13. Climate action", "carbon cycle", "Life Science", "Humans", "Desert Climate", "Ecosystem", "geochemistry"]}, "links": [{"href": "https://iris.univr.it/bitstream/11562/1001390/1/Soil%20resources%20and%20element%20stocks%20in%20drylands%20to%20face%20global%20issues.pdf"}, {"href": "https://www.nature.com/articles/s41598-018-32229-0.pdf"}, {"href": "https://doi.org/11369/372709"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Scientific%20Reports", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11369/372709", "name": "item", "description": "11369/372709", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11369/372709"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-09-13T00:00:00Z"}}, {"id": "11379/629705", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:22:11Z", "type": "Journal Article", "created": "2025-07-19", "title": "Role of Biodegradable and Non-Biodegradable Microplastic in Modulating the toxicological Effects of Organic Pollutants in the Soil Organism Folsomia candida", "description": "Abstract                   <p>                     The ecotoxicological effects of microplastics in soil ecosystems are complex, particularly in areas of intensive agriculture and livestock production, where plant protection products and veterinary drugs commonly coexist with plastic residues. In this study, we investigated the impact, under laboratory conditions, of 3 MP types (non-biodegradable low-density polyethylene (LDPE) and biodegradable polybutylene adipate terephthalate-based (PBAT-based) and a starch-based polymer) on the soil-dwelling species                     Folsomia candida                     (Willem, 1902) in soils contaminated with the anthelmintic albendazole and the fungicide pyraclostrobin. These organic pollutants (OPs) are frequently found in areas of intensive agriculture and livestock production.                     F. candida                     individuals were exposed for 28\uffc2\uffa0days to soils contaminated by the OPs at 0.0001 w/w% (1\uffc2\uffa0mg/kg), with and without MPs at 0.01 and 0.1 w/w% concentrations (100 and 1000\uffc2\uffa0mg/kg respectively), under laboratory conditions (21\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff891 C\uffc2\uffb0, 80%\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff891 RH). Adults\uffe2\uff80\uff99 survival, egg production, and juveniles\uffe2\uff80\uff99 occurrence were recorded as endpoints. Our findings indicate that microplastics alone did not significantly affect the survival and reproductive outcomes of                     F. candida                     . However, in soils contaminated with albendazole and pyraclostrobin, the presence of biodegradable MPs resulted in significant effects compared to the control and the treatment with only microplastics. Specifically, PBAT-based MPs significantly impacted adult survival, juvenile occurrence, and egg counts, while starch-based MPs primarily affected egg counts. On the contrary, co-exposure to OPs and LDPE MPs did not show significant effects. These results suggest that different MPs influence the bioavailability and toxicity of co-occurring fungicides and veterinary drug in soil ecosystems in different ways, with implications for assessing the ecological risks of biodegradable and non-biodegradable plastics in contaminated soils. The potential of MPs to influence the spatial distribution and bioavailability of organic pollutants for soil mesofauna needs further investigation.                   </p", "keywords": ["Soil ecotoxicology", "Pyraclostrobin", "Microplastics (MPs)", "Organic pollutants (OPs)", "Albendazole", "Biodegradable plastics", "Microplastics (MPs)", " Biodegradable plastics", " Organic pollutants (OPs)", " Albendazole", " Pyraclostrobin", " Soil ecotoxicology", " Folsomia candida", "Folsomia candida"]}, "links": [{"href": "https://iris.unibs.it/bitstream/11379/629705/1/s11270-025-08351-x.pdf"}, {"href": "https://doi.org/11379/629705"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Water%2C%20Air%2C%20%26amp%3B%20Soil%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11379/629705", "name": "item", "description": "11379/629705", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11379/629705"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-19T00:00:00Z"}}, {"id": "11572/255256", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:22:12Z", "type": "Journal Article", "created": "2019-09-23", "title": "Elastica catastrophe machine: theory, design and experiments", "description": "Open Access31 pages, 18 figures", "keywords": ["Nonlinear mechanics; Snap mechanisms; Structural instability", "0203 mechanical engineering", "FOS: Physical sciences", "02 engineering and technology", "Chaotic Dynamics (nlin.CD)", "Nonlinear Sciences - Chaotic Dynamics", "0210 nano-technology"]}, "links": [{"href": "https://iris.unitn.it/bitstream/11572/255256/1/1-s2.0-S002250961930523X-main.pdf"}, {"href": "https://doi.org/11572/255256"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20the%20Mechanics%20and%20Physics%20of%20Solids", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11572/255256", "name": "item", "description": "11572/255256", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11572/255256"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-01T00:00:00Z"}}, {"id": "11585/996230", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:22:15Z", "type": "Journal Article", "created": "2023-10-10", "title": "Beyond PLFA: Concurrent extraction of neutral and glycolipid fatty acids provides new insights into soil microbial communities", "description": "The analysis of phospholipid fatty acids (PLFAs) is one of the most common methods used to quantify the abundance, and analyse the community structure, of soil microbes. The PLFA extraction method can yield two additional lipid fractions\u2014neutral lipids and glycolipids\u2014which potentially hold additional, valuable information on soil microbial communities. Yet its quantitative sensitivity on complete neutral lipid (NLFA) and glycolipid fatty acid (GLFA) profiles has never been validated. In this study we tested (i) if the high-throughput PLFA method can be expanded to concurrently extract complete NLFA and GLFA profiles, as well as sterols, (ii) whether taxonomic specificities of signature fatty acids are retained across the three lipid fractions in pure culture strains, and (iii) whether NLFAs and GLFAs allow soil-specific fingerprinting to the same extent as PLFA analysis. By adjusting the polarity of chloroform with 2% ethanol for solid phase extraction, pure lipid standards were fully fractionated into neutral lipids, glycolipids, and phospholipids. Sterols eluted in the neutral lipid fraction, and a betaine lipid co-eluted with phospholipids. We found consistent taxonomic specificities of fatty acid markers across the three lipid fractions by analysing pure culture extracts representative of soil microbes. Fatty acid profiles from soil extracts, however, showed stronger differences between PLFAs, NLFAs, and GLFAs than between soil types. This indicates that PLFAs and NLFAs signify different community properties (biomass vs. carbon storage, putatively), and that GLFAs are sensitive markers for community traits which behave differently than PLFAs. Although we consistently found high abundances of characteristic sterols in fungal extracts, the PLFA extraction method only yielded miniscule amounts of ergosterol from soil extracts. We argue that concomitant measurement of fatty acid profiles from all three lipid fractions is a low-effort and potentially information-rich addition to the PLFA method, and discuss its applicability for soil microbial community analyses.", "keywords": ["0301 basic medicine", "2. Zero hunger", "106022 Mikrobiologie", "0303 health sciences", "15. Life on land", "Soil lipids", "03 medical and health sciences", "106026 \u00d6kosystemforschung", "NLFA", "Ergosterol", "Ergosterol; GLFA; NLFA; Phospholipid fatty acids; Soil lipids", "Phospholipid fatty acid", "soil lipids", "Phospholipid fatty acids", "106022 Microbiology", "GLFA", "106026 Ecosystem research"]}, "links": [{"href": "https://doi.org/11585/996230"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11585/996230", "name": "item", "description": "11585/996230", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11585/996230"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-12-01T00:00:00Z"}}, {"id": "11586/524923", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:22:15Z", "type": "Journal Article", "created": "2024-12-03", "title": "Addressing the environmental sustainability of plastics used in agriculture: a multi-actor perspective", "description": "Abstract                   <p>Plastics used in agriculture, commonly known as agriplastics (AP), offer numerous advantages in terrestrial agriculture, forestry, fisheries and aquaculture, but the diffusion of AP-intensive practices has led to extensive pollution. This review aims to synthesise scientific and policy discussions surrounding AP, examining evidence of their benefits and detrimental environmental and agricultural impacts. Following the proposal of a preliminary general taxonomy of AP, this paper presents the findings from a survey conducted among international experts from the plastic industry, farmer organisations, NGOs and environmental research institutes. This analysis highlights knowledge gaps, demands and perspectives for the sustainable future use of AP. Stakeholder positions vary on the options of \uffe2\uff80\uff98rejection\uffe2\uff80\uff99 or \uffe2\uff80\uff98reduction\uffe2\uff80\uff99 of AP, as well as the role of alternative materials such as (bio)degradable and compostable plastics. However, there is consensus on critical issues such as redesign, labelling, traceability, environmental safety standards, deployment and retrieval standards, as well as innovative waste management approaches. All stakeholders express concern for the environment. A \uffe2\uff80\uff98best practice\uffe2\uff80\uff99-based circular model was elaborated capturing these perspectives. In the context of global food systems increasingly reliant on AP, scientists emphasise the need to simultaneously preserve nature-based and traditional knowledge-based sustainable agricultural practices to enhance food system resilience.</p", "keywords": ["multi-actor approach", "330", "Multi-actor approach", "Agriculture", "Environmental technology. Sanitary engineering", "630", "Environmental sciences", "plastic pollution", "plastic waste", "Agriplastics", "Plastic pollution", "Plastic waste", "agriplastics", "GE1-350", "TD1-1066", "agriculture"]}, "links": [{"href": "https://doi.org/11586/524923"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Cambridge%20Prisms%3A%20Plastics", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11586/524923", "name": "item", "description": "11586/524923", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11586/524923"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-12-04T00:00:00Z"}}, {"id": "1808.10328", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:22:20Z", "type": "Journal Article", "created": "2018-09-05", "title": "Asymptotically Optimal Codes Correcting Fixed-Length Duplication Errors in DNA Storage Systems", "description": "Open AccessTo appear in IEEE Communications Letters", "keywords": ["FOS: Computer and information sciences", "Discrete Mathematics (cs.DM)", "Computer Science - Information Theory", "Information Theory (cs.IT)", "0202 electrical engineering", " electronic engineering", " information engineering", "0102 computer and information sciences", "02 engineering and technology", "94B20", " 94B25", " 94B50", " 94B65", " 68P20", " 68P30", " 68R05", "01 natural sciences", "Computer Science - Discrete Mathematics"]}, "links": [{"href": "https://doi.org/1808.10328"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/IEEE%20Communications%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1808.10328", "name": "item", "description": "1808.10328", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1808.10328"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-11-01T00:00:00Z"}}, {"id": "1854/LU-8732814", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:22:21Z", "type": "Journal Article", "created": "2021-11-09", "title": "Litter quality, mycorrhizal association, and soil properties regulate effects of tree species on the soil fauna community", "description": "Abstract   Forest management, including selection of appropriate tree species to mitigate climate change and sustain biodiversity, requires a better understanding of factors that affect the composition of soil fauna communities. These communities are an integral part of the soil ecosystem and play an essential role in forest ecosystem functioning related to carbon and nitrogen cycling. Here, by performing a field study across six common gardens in Denmark, we evaluated the effects of tree species identity and mycorrhizal association (i.e., arbuscular mycorrhiza (AM) and ectomycorrhiza (ECM)) on soil fauna (meso- and macrofauna) taxonomic and functional community composition by using diversity, abundance, and biomass as proxies. We found that (1) tree species identity and mycorrhizal association both showed significant effects on soil fauna communities, but the separation between community characteristics in AM and ECM tree species was not entirely consistent; (2) total soil fauna abundance, biomass, as well as taxonomic and functional diversity were generally significantly higher under AM tree species, as well as lime, with higher litter quality (high N and base cation and low lignin:N ratio); (3) tree species significantly influenced the properties of litter, forest floor, and soil, among which litter and/or forest floor N, P, Ca, and Mg concentrations, soil pH, and soil moisture predominantly affected soil fauna abundance, biomass, and taxonomic and functional diversity. Our results from this multisite common garden experiment provide strong and consistent evidence of positive effects of tree species with higher litter quality on soil fauna communities in general, which helps to better understand the effects of tree species selection on soil biodiversity and its functions related to forest soil carbon sequestration.", "keywords": ["DECOMPOSITION", "EARTHWORMS", "Diversity", "PH", "FOREST FLOOR", "Common garden experiment", "Soil meso- and macrofauna", "DIVERSITY", "Biology and Life Sciences", "04 agricultural and veterinary sciences", "15. Life on land", "NITROGEN", "CARBON", "Taxonomic group", "FUNCTIONAL TRAITS", "Abundance", "13. Climate action", "Earth and Environmental Sciences", "Functional group", "0401 agriculture", " forestry", " and fisheries", "BIODIVERSITY", "ABUNDANCE", "Biomass"]}, "links": [{"href": "https://doi.org/1854/LU-8732814"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1854/LU-8732814", "name": "item", "description": "1854/LU-8732814", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1854/LU-8732814"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-01T00:00:00Z"}}, {"id": "1959.7/uws:72836", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:22:25Z", "type": "Journal Article", "created": "2023-04-24", "title": "Different Cerrado Ecotypes Show Contrasting Soil Microbial Properties, Functioning Rates, and Sensitivity to Changing Water Regimes", "description": "Abstract<p>Soil moisture is among the most important factors regulating soil biodiversity and functioning. Models forecast changes in the precipitation regime in many areas of the planet, but how these changes will influence soil functioning, and how biotic drivers modulate such effects, is far from being understood. We evaluated the responses of C and N fluxes, and soil microbial properties to different soil water regimes in soils from the main three ecotypes of the world's largest and most diverse tropical savanna. Further, we explored the direct and indirect effects of changes in the ecotype and soil water regimes on these key soil processes. Soils from the woodland savanna showed a better nutritional status than the other ecotypes, as well as higher potential N cycling rates, N2O emissions, and soil bacterial abundance but lower bacterial richness, whereas potential CO2 emissions and CH4 uptake peaked in the intermediate savanna. The ecotype also modulated the effects of changes in the soil water regime on nutrient cycling, greenhouse gas fluxes, and soil bacterial properties, with more intense responses in the intermediate savanna. Further, we highlight the existence of multiple contrasting direct and indirect (via soil microbes and abiotic properties) effects of an intensification of the precipitation regime on soil C- and N-related processes. Our results confirm that ecotype is a fundamental driver of soil properties and functioning in the Cerrado and that it can determine the responses of key soil processes to changes in the soil water regime.</p", "keywords": ["2. Zero hunger", "Ecotype", "0301 basic medicine", "Take urgent action to combat climate change and its impacts", "Naturgeografi", "ecotype", "Cerrado", "greenhouse gases.", "04 agricultural and veterinary sciences", "15. Life on land", "precipitation regime", "Precipitation regime", "cerrado", "03 medical and health sciences", "Greenhouse gases", "Physical Geography", "13. Climate action", "N cycle", "XXXXXX - Unknown", "0401 agriculture", " forestry", " and fisheries", "C cycle", "http://metadata.un.org/sdg/13", "cerrado; ecotype; precipitation regime; C cycle; N cycle; greenhouse gases"]}, "links": [{"href": "https://doi.org/1959.7/uws:72836"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecosystems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1959.7/uws:72836", "name": "item", "description": "1959.7/uws:72836", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1959.7/uws:72836"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-04-24T00:00:00Z"}}, {"id": "1F20D517-4F12-4194-B9EC-544A45676839", "type": "Feature", "geometry": null, "properties": {"updated": "2020-02-11T00:00:00Z", "type": "Dataset", "language": "de", "title": "Boden\u00fcbersichtskarte 1:200.000 (B\u00dcK200) - CC7110 Mannheim", "description": "Die Boden\u00fcbersichtskarte 1:200.000 (B\u00dcK200) wird von der Bundesanstalt f\u00fcr Geowissenschaften und Rohstoffe (BGR) in Zusammenarbeit mit den Staatlichen Geologischen Diensten (SGD) der Bundesl\u00e4nder im Blattschnitt der Topographischen \u00dcbersichtskarte 1:200.000 (T\u00dcK200) erarbeitet und in 55 einzelnen Kartenbl\u00e4ttern herausgegeben. Die digitale, blattschnittfreie Datenhaltung bildet eine detaillierte, bundesweit einheitliche und fl\u00e4chendeckende Informationsgrundlage f\u00fcr L\u00e4nder \u00fcbergreifende Aussagen zu Bodennutzung und Bodenschutz. \u00dcber den aktuellen Bearbeitungsstand des Kartenwerks informieren die Internetseiten der BGR zum Thema Boden. Die Verbreitung und Vergesellschaftung der B\u00f6den auf dem Gebiet dieses Kartenblattes wird anhand von 97 Legendeneinheiten (gegliedert nach Bodenregionen und Bodengro\u00dflandschaften) beschrieben. Jede Legendeneinheit beinhaltet bodensystematische Informationen (Bodensubtyp) und Informationen zum Bodenausgangsgestein sowohl f\u00fcr die Leitb\u00f6den als auch f\u00fcr deren Begleiter. Im Rahmen der Qualit\u00e4tssicherung wurde die Linienf\u00fchrung der Bodengrenzen im gesamten Blattgebiet verbessert (Stand 12. Juli 2016).", "formats": [{"name": "PDF"}], "keywords": ["ackerbauliches-ertragspotential", "baden-wu\u0308rttemberg", "boden", "bodenart", "bodenausgangsgestein", "bodenauslaugung", "bodenbearbeitung", "bodenbelastung", "bodenbildung", "bodenbiologie", "bodenchemie", "bodendegradation", "bodendekontamination", "bodeneigenschaften", "bodenerosion", "bodenfeuchtigkeit", "bodenform", "bodenfruchtbarkeit", "bodenfunktion", "bodengefu\u0308ge", "bodengesellschaft", "bodengestaltung", "bodengruppe", "bodengu\u0308te", "bodenhorizont", "bodeninformationssystem", "bodenkarte", "bodenluft", "bodenmechanik", "bodenmineralogie", "bodennutzbarkeit", "bodennutzung", "bodenphysikalische-eigenschaften", "bodenprofil", "bodenskelett", "bodensubstrat", "bodensystematik", "bodentyp", "bodenverbreitung", "de", "durchla\u0308ssigkeit", "effektive-durchwurzelungstiefe", "fachinformationssystem", "hessen", "mannheim", "opendata", "rheinland-pfalz", "saarland", "soil"], "contacts": [{"organization": "Bundesanstalt f\u00fcr Geowissenschaften und Rohstoffe (BGR)", "roles": ["creator"]}]}, "links": [{"href": "https://download.bgr.de/bgr/Boden/BUEK200/7110/jpg/buek200_7110.zip"}, {"href": "https://download.bgr.de/bgr/Boden/BUEK200/7110/pdf/buek200_7110.zip"}, {"href": "https://download.bgr.de/bgr/Boden/BUEK200/7110/png/buek200_7110.zip"}, {"href": "https://download.bgr.de/bgr/Boden/BUEK200/7110/shp/buek200_7110.zip"}, {"href": "https://download.bgr.de/bgr/Boden/BUEK200/7110/tiff/buek200_7110.zip"}, {"href": "http://data.europa.eu/88u/dataset/1f20d517-4f12-4194-b9ec-544a45676839"}, {"rel": "self", "type": "application/geo+json", "title": "1F20D517-4F12-4194-B9EC-544A45676839", "name": "item", "description": "1F20D517-4F12-4194-B9EC-544A45676839", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1F20D517-4F12-4194-B9EC-544A45676839"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"null": "date"}}, {"id": "10.1002/ece3.71670", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:14:25Z", "type": "Journal Article", "created": "2025-07-17", "title": "Ground\u2010Dwelling Spider Community Responses to Forest Management in a Mediterranean Oak Forest", "description": "ABSTRACT<p>Timber production is one of the most important ecosystem services provided by hardwood forests, but clear\uffe2\uff80\uff90cutting causes severe soil disturbance. There is a current need to develop alternative forest management practices to clear\uffe2\uff80\uff90cutting in order to simultaneously promote timber production, preserve biodiversity and enhance forest health and economic value. Here, we experimentally manipulated a Quercus pubescens forest to evaluate the effects of a thinning gradient (i.e., partial tree removal) ranging from 25% to 75% basal area reduction and a logging residue retention (i.e., slash management) on ground\uffe2\uff80\uff90dwelling spider abundance and species richness. These two alternative management practices were compared with clear\uffe2\uff80\uff90cutting (100% basal area reduction) and logging residue exportation methods. In each treatment, we recorded soil temperature and moisture, understorey vegetation cover, richness and functional traits and mesologic factors describing habitat characteristics. We found clear\uffe2\uff80\uff90cutting had a stronger effect than thinning on the microclimatic conditions, i.e., higher temperatures, drier soils and reduced forest buffering capacity. The 25% thinning intensity was sufficient to drastically reduce both spider abundance and richness, but we did not find a more significant reduction when more intensive cutting was applied. This result suggests a threshold effect in the response of spiders to cutting. Significant changes in the functional diversity of understory plant communities in response to basal area were observed, along with strong effects on spider communities. Unexpectedly, slash retention appeared to have little or no effect on the forest microclimate, spider abundance and species richness. This work is intended for forest managers and policymakers and aims to contribute to the development of relevant practices that address current environmental and economic challenges. While our findings provide valuable insights into understudied forest management practices in Mediterranean climates, additional research is required, particularly through multi\uffe2\uff80\uff90seasonal and long\uffe2\uff80\uff90term spider sampling.</p", "keywords": ["[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "Ecology", "slash management", "spider community", "thinning", "forest management", "herbaceous vegetation", "clear\u2010cut", "QH540-549.5", "Research Article"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1002/ece3.71670"}, {"href": "https://doi.org/10.1002/ece3.71670"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology%20and%20Evolution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ece3.71670", "name": "item", "description": "10.1002/ece3.71670", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ece3.71670"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-01T00:00:00Z"}}, {"id": "10.1007/s00436-025-08483-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:14:46Z", "type": "Journal Article", "created": "2025-04-08", "title": "Implementation of real-time PCR assays for diagnosing intestinal protozoa infections", "description": "Abstract           <p>Intestinal protozoa infections present a major public health challenge, particularly in areas with poor sanitation and limited access to clean water. Effective diagnostic methods are critical, yet traditional microscopy, though widely used for its simplicity, lacks the sensitivity and specificity of modern techniques like real-time Polymerase Chain Reaction (qPCR), making the latter a more effective tool for monitoring and assessing the burden of intestinal protozoa diseases. In this study, we implemented two duplex qPCR assays to detect Entamoeba dispar\uffe2\uff80\uff89+\uffe2\uff80\uff89Entamoeba histolytica and Cryptosporidium spp.\uffe2\uff80\uff89+\uffe2\uff80\uff89Chilomastix mesnili, along with singleplex assays for Giardia duodenalis and Blastocystis spp., using a 10 \uffc2\uffb5L reaction volume. This marks the first molecular detection of Chilomastix mesnili by qPCR, enhancing diagnostic precision. Using these, we analyzed stool samples from 70 patients on Pemba Island, Tanzania, before and 54 samples after treatment with 20, 25, or 30\uffc2\uffa0mg of emodepside or placebo, aiming to assess protozoa prevalence for this region and emodepside\uffe2\uff80\uff99s potential antiprotozoal effects. Our qPCR reliably detected protozoa in 74.4% of samples, with Entamoeba histolytica and Entamoeba dispar in 31.4% of cases. Notably, one-third of these infections were caused by Entamoeba histolytica. No significant reduction in protozoa was observed after emodepside treatment compared to placebo. The study highlights the utility of qPCR in providing species-level differentiation and improving the speed and cost-effectiveness of testing. The high prevalence of protozoa in this region underscores the need for continued monitoring and control efforts, though emodepside was not effective against protozoa infections. </p", "keywords": ["Protozoan Infections", "Research", "Entamoeba histolytica", "Cryptosporidium", "Real-Time Polymerase Chain Reaction", "Sensitivity and Specificity", "Tanzania", "Entamoeba", "Feces", "Molecular Diagnostic Techniques", "Blastocystis", "Humans", "Intestinal Diseases", " Parasitic", "Giardia lamblia"]}, "links": [{"href": "https://doi.org/10.1007/s00436-025-08483-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Parasitology%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00436-025-08483-3", "name": "item", "description": "10.1007/s00436-025-08483-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00436-025-08483-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-04-01T00:00:00Z"}}, {"id": "10.1007/s00442-004-1788-8", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:14:46Z", "type": "Journal Article", "created": "2005-02-01", "title": "Effects Of Fire On Properties Of Forest Soils: A Review", "description": "Many physical, chemical, mineralogical, and biological soil properties can be affected by forest fires. The effects are chiefly a result of burn severity, which consists of peak temperatures and duration of the fire. Climate, vegetation, and topography of the burnt area control the resilience of the soil system; some fire-induced changes can even be permanent. Low to moderate severity fires, such as most of those prescribed in forest management, promote renovation of the dominant vegetation through elimination of undesired species and transient increase of pH and available nutrients. No irreversible ecosystem change occurs, but the enhancement of hydrophobicity can render the soil less able to soak up water and more prone to erosion. Severe fires, such as wildfires, generally have several negative effects on soil. They cause significant removal of organic matter, deterioration of both structure and porosity, considerable loss of nutrients through volatilisation, ash entrapment in smoke columns, leaching and erosion, and marked alteration of both quantity and specific composition of microbial and soil-dwelling invertebrate communities. However, despite common perceptions, if plants succeed in promptly recolonising the burnt area, the pre-fire level of most properties can be recovered and even enhanced. This work is a review of the up-to-date literature dealing with changes imposed by fires on properties of forest soils. Ecological implications of these changes are described.", "keywords": ["Nitrogen", "Phosphorus", "Fire", " Forest ecosystems", " Forest soils", " Soil ecology", " Soil properties.", "04 agricultural and veterinary sciences", "15. Life on land", "Invertebrates", "01 natural sciences", "Carbon", "Fires", "Trees", "Soil", "13. Climate action", "Animals", "0401 agriculture", " forestry", " and fisheries", "Hydrophobic and Hydrophilic Interactions", "Soil Microbiology", "0105 earth and related environmental sciences"], "contacts": [{"organization": "CERTINI, GIACOMO", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s00442-004-1788-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-004-1788-8", "name": "item", "description": "10.1007/s00442-004-1788-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-004-1788-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-02-02T00:00:00Z"}}, {"id": "10.1002/ecs2.1663", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-22T16:14:26Z", "type": "Journal Article", "created": "2017-01-13", "title": "Restoring Surface Fire Stabilizes Forest Carbon Under Extreme Fire Weather In The Sierra Nevada", "description": "Abstract<p>Climate change in the western United States has increased the frequency of extreme fire weather events and is projected to increase the area burned by wildfire in the coming decades. This changing fire regime, coupled with increased high\uffe2\uff80\uff90severity fire risk from a legacy of fire exclusion, could destabilize forest carbon (C), decrease net ecosystem exchange (NEE), and consequently reduce the ability of forests to regulate climate through C sequestration. While management options for minimizing the risk of high\uffe2\uff80\uff90severity fire exist, little is known about the longer\uffe2\uff80\uff90term carbon consequences of these actions in the context of continued extreme fire weather events. Our goal was to compare the impacts of extreme wildfire events on carbon stocks and fluxes in a watershed in the Sierra National Forest. We ran simulations to model wildfire under contemporary and extreme fire weather conditions, and test how three management scenarios (no\uffe2\uff80\uff90management, thin\uffe2\uff80\uff90only, thin and maintenance burning) influence fire severity, forest C stocks and fluxes, and wildfire C emissions. We found that the effects of treatment on wildfire under contemporary fire weather were minimal, and management conferred neither significant reduction in fire severity nor increases in C stocks. However, under extreme fire weather, the thin and maintenance burning scenario decreased mean fire severity by 25%, showed significantly greater C stability, and unlike the no\uffe2\uff80\uff90management and thin\uffe2\uff80\uff90only management options, the thin and maintenance burning scenario showed no decrease in NEE relative to the contemporary fire weather scenarios. Further, under extreme fire weather conditions, wildfire C emissions were lowest in the thin and maintenance burning scenario, (reduction of 13.7\uffc2\uffa0Mg\uffc2\uffa0C/ha over the simulation period) even when taking into account the C costs associated with prescribed burning. Including prescribed burning in thinning operations may be critical to maintaining C\uffc2\uffa0stocks and reducing C emissions in the future where extreme fire weather events are more frequent.</p>", "keywords": ["Carbon sequestration", "13. Climate action", "Forest management -- Environmental aspects", "Wildfires -- West (U.S.) -- Effect of climatic changes on", "15. Life on land", "01 natural sciences", "Environmental Sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://pdxscholar.library.pdx.edu/context/esm_fac/article/1188/viewcontent/Krofcheck_et_al_2017_Ecosphere__1_.pdf"}, {"href": "https://doi.org/10.1002/ecs2.1663"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecosphere", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ecs2.1663", "name": "item", "description": "10.1002/ecs2.1663", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ecs2.1663"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-01-01T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=EC&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=EC&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=EC&", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=EC&offset=50", "hreflang": "en-US"}], "numberMatched": 8198, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-09-23T10:47:13.694720Z"}