{"type": "FeatureCollection", "features": [{"id": "10.1002/jeq2.20119", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:14:30Z", "type": "Journal Article", "created": "2020-07-01", "title": "Global Research Alliance N2O chamber methodology guidelines: Summary of modeling approaches", "description": "Abstract

Measurements of nitrous oxide (N2O) emissions from agriculture are essential for understanding the complex soil\uffe2\uff80\uff93crop\uffe2\uff80\uff93climate processes, but there are practical and economic limits to the spatial and temporal extent over which measurements can be made. Therefore, N2O models have an important role to play. As models are comparatively cheap to run, they can be used to extrapolate field measurements to regional or national scales, to simulate emissions over long time periods, or to run scenarios to compare mitigation practices. Process\uffe2\uff80\uff90based models can also be used as an aid to understanding the underlying processes, as they can simulate feedbacks and interactions that can be difficult to distinguish in the field. However, when applying models, it is important to understand the conceptual process differences in models, how conceptual understanding changed over time in various models, and the model requirements and limitations to ensure that the model is well suited to the purpose of the investigation and the type of system being simulated. The aim of this paper is to give the reader a high\uffe2\uff80\uff90level overview of some of the important issues that should be considered when modeling. This includes conceptual understanding of widely used models, common modeling techniques such as calibration and validation, assessing model fit, sensitivity analysis, and uncertainty assessment. We also review examples of N2O modeling for different purposes and describe three commonly used process\uffe2\uff80\uff90based N2O models (APSIM, DayCent, and DNDC).Soil hydraulic properties are required in various modelling schemes. We propose a consistent spatial soil hydraulic database at 7 soil depths up to 2\uffc2\uffa0m calculated for Europe based on SoilGrids250m and 1\uffc2\uffa0km datasets and pedotransfer functions trained on the European Hydropedological Data Inventory. Saturated water content, water content at field capacity and wilting point, saturated hydraulic conductivity and Mualem\uffe2\uff80\uff90van Genuchten parameters for the description of the moisture retention, and unsaturated hydraulic conductivity curves have been predicted. The derived 3D soil hydraulic layers (EU\uffe2\uff80\uff90SoilHydroGrids ver1.0) can be used for environmental modelling purposes at catchment or continental scale in Europe. Currently, only EU\uffe2\uff80\uff90SoilHydroGrids provides information on the most frequently required soil hydraulic properties with full European coverage up to 2\uffc2\uffa0m depth at 250\uffc2\uffa0m resolution.This study analyses long\uffe2\uff80\uff90term changes in drought indices (Standardised Precipitation Index\uffe2\uff80\uff94SPI, Standardised Precipitation\uffe2\uff80\uff93Evapotranspiration Index\uffe2\uff80\uff94SPEI) at 1 and 3\uffe2\uff80\uff89months scales at 182 stations in 11 central and eastern European countries during 1949\uffe2\uff80\uff932018. For comparative purposes, the necessary atmospheric evaporative demand (AED) to obtain SPEI was calculated using two methods, Hargreaves\uffe2\uff80\uff90Samani (SPEIH) and Penman\uffe2\uff80\uff90Monteith (SPEIP). The results show some relevant changes and tendencies in the drought indices. Statistically significant increase in SPI and SPEI during the cold season (November\uffe2\uff80\uff93March), reflecting precipitation increase, was found in the northern part of the study region, in Estonia, Latvia, Lithuania, northern Belarus and northern Poland. In the rest of study domain, a weak and mostly insignificant decrease prevailed in winter. Summer season (June\uffe2\uff80\uff93August) is characterized by changes in the opposite sign. An increase was observed in the north, while a clear decrease in SPEI, reflecting a drying trend, was typical for the southern regions: the Czech Republic, Slovakia, Hungary, Romania, Moldova and southern Poland. A general drying tendency revealed also in April, which was statistically significant over a wide area in the Czech Republic and Poland. Increasing trends in SPI and SPEI for September and October were detected in Romania, Moldova and Hungary. The use of SPEI instead of SPI generally enhances drying trends.

Making agriculture sustainable is a global challenge. In the European Union (EU), the Common Agricultural Policy (CAP) is failing with respect to biodiversity, climate, soil, land degradation as well as socio\uffe2\uff80\uff90economic challenges.

The European Commission's proposal for a CAP post\uffe2\uff80\uff902020 provides a scope for enhanced sustainability. However, it also allows Member States to choose low\uffe2\uff80\uff90ambition implementation pathways. It therefore remains essential to address citizens' demands for sustainable agriculture and rectify systemic weaknesses in the CAP, using the full breadth of available scientific evidence and knowledge.

Concerned about current attempts to dilute the environmental ambition of the future CAP, and the lack of concrete proposals for improving the CAP in the draft of the European Green Deal, we call on the European Parliament, Council and Commission to adopt 10 urgent action points for delivering sustainable food production, biodiversity conservation and climate mitigation.

Knowledge is available to help moving towards evidence\uffe2\uff80\uff90based, sustainable European agriculture that can benefit people, nature and their joint futures.

The statements made in this article have the broad support of the scientific community, as expressed by above 3,600 signatories to the preprint version of this manuscript. The list can be found here (https://doi.org/10.5281/zenodo.3685632).

A free Plain Language Summary can be found within the Supporting Information of this article.

", "keywords": ["330", "333.7 Landfl\u00e4chen", " Naturr\u00e4ume f\u00fcr Freizeit und Erholung", " Naturreservate", " Energie", "public goods", "ddc:320", "0211 other engineering and technologies", "02 engineering and technology", "SMART targets", "01 natural sciences", "7. Clean energy", "630", "Article", "12. Responsible consumption", "GF1-900", "11. Sustainability", "evidence-based policy", "ddc:630", "European Green Deal", "QH540-549.5", "agriculture", "biodiversity", "0105 earth and related environmental sciences", "2. Zero hunger", "Ecology", "ddc:333", "1. No poverty", "15. Life on land", "320", "Agronomy", "Environmental sciences", "climate change", "Human ecology. Anthropogeography", "13. Climate action", "evidence\u2010based policy", "Common Agricultural Policy"]}, "links": [{"href": "https://besjournals.onlinelibrary.wiley.com/doi/pdf/10.1002/pan3.10080"}, {"href": "https://doi.org/10.1002/pan3.10080"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/People%20and%20Nature", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/pan3.10080", "name": "item", "description": "10.1002/pan3.10080", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/pan3.10080"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-08T00:00:00Z"}}, {"id": "10.1007/s10518-021-01083-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:12Z", "type": "Journal Article", "created": "2021-04-08", "title": "Model of seismic design lateral force levels for the existing reinforced concrete European building stock", "description": "As part of the development of a European Seismic Risk Model 2020 (ESRM20), the spatial and temporal evolution of seismic design across Europe has been studied in order to bet- ter classify reinforced concrete buildings (which represent more than 30% of the approxi- mately 145 million residential, commercial and industrial buildings in Europe) and map them to vulnerability models based on simulated seismic design. This paper summarises the model that has been developed to assign the years when different seismic design levels (low code, moderate code and high code) were introduced in a number of European coun- tries and the associated lateral forces that were specified spatially within each country for the low and moderate codes for typical reinforced concrete mid-rise buildings. This process has led to an improved understanding of how design regulations evolved across Europe and how this has impacted the vulnerability of the European residential building stock. The model estimates that ~ 60% of the reinforced concrete buildings in Europe have been seis- mically designed, and of those buildings ~ 60% have been designed to low code, ~ 25% to moderate code and 15% to high code. This seismic design model aims at being a dynamic source of information that will be continuously updated with additional feedback from local experts and datasets. To this end, all of the data has been made openly available as shapefiles on a GitLab repository.", "keywords": ["Seismic design evolution ; Lateral force levels ; European building stock ; Exposure model ; Seismic zonation maps ; Seismic risk", "Physics", "ddc:530", "0211 other engineering and technologies", "Seismic design evolution", "02 engineering and technology", "624", "Exposure model", "530", "Seismic zonation maps", "Seismic risk", "11. Sustainability", "Lateral force levels", "European building stock", "info:eu-repo/classification/ddc/530"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s10518-021-01083-3.pdf"}, {"href": "https://doi.org/10.1007/s10518-021-01083-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bulletin%20of%20Earthquake%20Engineering", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10518-021-01083-3", "name": "item", "description": "10.1007/s10518-021-01083-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10518-021-01083-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-08T00:00:00Z"}}, {"id": "10.1007/s10980-024-02037-1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:22Z", "type": "Journal Article", "created": "2025-01-12", "title": "Combining local monitoring data and scientific models to prioritize conservation for European ground squirrel and safeguard grassland habitats", "description": "Context: Promoting grassland habitat networks within agricultural landscapes is essential for supporting biodiversity. However, the characteristics of these networks are often poorly documented, making it difficult to prioritize conservation strategies and effectively protect grassland-dependent species. Objectives: We set to identify conservation priorities for (semi)natural grasslands by assessing habitat network characteristics based on a combination of monitoring data and scientific model output for European Ground Squirrel (EGS), a keystone grassland specialist, in agricultural settings of northern Serbia. Methods: We used the spatially explicit model, LARCH, to determine the current habitat networks and available monitoring data on presence/absence and habitat suitability together with Circuitscape to better understand the characteristics of those networks. The combination of modeling results and monitoring data was used to prioritize conservation measures for each network to support a stable and viable EGS metapopulation. Results: We identified 15 habitat networks. Our analysis showed that two of these need no interventions, but most of them need a mix of improving habitat quality and connections within and between the networks to support local populations and the metapopulation overall. Conclusions: Results revealed areas in which spatial adaptation measures (e.g., grassland restoration and corridor development) should be deployed to accommodate the long-term survival of EGS. It might be considered to stop conservation efforts in some abandoned networks as the network characteristics are too poor, and resources should be used to improve habitat networks that are still occupied. Our findings may guide the conservation of (semi)natural grasslands and future sustainable land-use planning in intensively farmed landscapes.", "keywords": ["European ground squirrel", "Connectivity", "Habitat monitoring data", "Grasslands", "Presence/absence data", "Conservation", "Presence/ absence data", "Habitat networks"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s10980-024-02037-1.pdf"}, {"href": "https://doi.org/10.1007/s10980-024-02037-1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Landscape%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10980-024-02037-1", "name": "item", "description": "10.1007/s10980-024-02037-1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10980-024-02037-1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-12T00:00:00Z"}}, {"id": "10.1007/s11104-019-03939-9", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:33Z", "type": "Journal Article", "created": "2019-02-01", "title": "Surface tension, rheology and hydrophobicity of rhizodeposits and seed mucilage influence soil water retention and hysteresis", "description": "Rhizodeposits collected from hydroponic solutions with roots of maize and barley, and seed mucilage washed from chia, were added to soil to measure their impact on water retention and hysteresis in a sandy loam soil at a range of concentrations. We test the hypothesis that the effect of plant exudates and mucilages on hydraulic properties of soils depends on their physicochemical characteristics and origin.Surface tension and viscosity of the exudate solutions were measured using the Du No\u00fcy ring method and a cone-plate rheometer, respectively. The contact angle of water on exudate treated soil was measured with the sessile drop method. Water retention and hysteresis were measured by equilibrating soil samples, treated with exudates and mucilages at 0.46 and 4.6\u00a0mg\u00a0g-1 concentration, on dialysis tubing filled with polyethylene glycol (PEG) solution of known osmotic potential.Surface tension decreased and viscosity increased with increasing concentration of the exudates and mucilage in solutions. Change in surface tension and viscosity was greatest for chia seed exudate and least for barley root exudate. Contact angle increased with increasing maize root and chia seed exudate concentration in soil, but not barley root. Chia seed mucilage and maize root rhizodeposits enhanced soil water retention and increased hysteresis index, whereas barley root rhizodeposits decreased soil water retention and the hysteresis effect. The impact of exudates and mucilages on soil water retention almost ceased when approaching wilting point at -1500\u00a0kPa matric potential.Barley rhizodeposits behaved as surfactants, drying the rhizosphere at smaller suctions. Chia seed mucilage and maize root rhizodeposits behaved as hydrogels that hold more water in the rhizosphere, but with slower rewetting and greater hysteresis.", "keywords": ["DYNAMICS", "/dk/atira/pure/subjectarea/asjc/1100/1111", "seed exudate", "FLOW", "QH301 Biology", "/dk/atira/pure/subjectarea/asjc/1100/1110", "root exudate", "630", "QH301", "soil water retention", "ROOT", "surface tension", "DIMR 646809", "Contact angle", "contact angle", "PHOSPHOLIPID SURFACTANTS", "2. Zero hunger", "STABILITY", "BB/J000868/1", "Surface tension", "Civil_env_eng", "Viscosity", "Hysteresis", "name=Soil Science", "Root exudate", "RHIZOSPHERE HYDRAULIC-PROPERTIES", "EXUDATION", "Regular Article", "04 agricultural and veterinary sciences", "15. Life on land", "540", "Soil water retention", "6. Clean water", "Seed exudate", "BB/J011460/1", "hysteresis", "BB/L026058/1", "viscosity", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "name=Plant Science", "MAIZE", "BB/P004180/1", "European Research Council"]}, "links": [{"href": "https://repository.uwl.ac.uk/id/eprint/5787/1/Naveed2019_Article_SurfaceTensionRheologyAndHydro.pdf"}, {"href": "https://eprints.soton.ac.uk/428238/1/Naveed2019_Article_SurfaceTensionRheologyAndHydro.pdf"}, {"href": "http://link.springer.com/content/pdf/10.1007/s11104-019-03939-9.pdf"}, {"href": "https://doi.org/10.1007/s11104-019-03939-9"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-019-03939-9", "name": "item", "description": "10.1007/s11104-019-03939-9", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-019-03939-9"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-02-02T00:00:00Z"}}, {"id": "10.1007/s11104-019-04308-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:33Z", "type": "Journal Article", "created": "2019-12-06", "title": "Significance of root hairs at the field scale \u2013 modelling root water and phosphorus uptake under different field conditions", "description": "Abstract Background and aims

Root hairs play a significant role in phosphorus (P) extraction at the pore scale. However, their importance at the field scale remains poorly understood.

Methods

This study uses a continuum model to explore the impact of root hairs on the large-scale uptake of P, comparing root hair influence under different agricultural scenarios. High vs low and constant vs decaying P concentrations down the soil profile are considered, along with early vs late precipitation scenarios.

Results

Simulation results suggest root hairs accounted for 50% of total P uptake by plants. Furthermore, a delayed initiation time of precipitation potentially limits the P uptake rate by over 50% depending on the growth period. Despite the large differences in the uptake rate, changes in the soil P concentration in the domain due to root solute uptake remains marginal when considering a single growth season. However, over the duration of 6\uffc2\uffa0years, simulation results showed that noticeable differences arise over time.

Conclusion

Root hairs are critical to P capture, with uptake efficiency potentially enhanced by coordinating irrigation with P application during earlier growth stages of crops.

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A pilot scale biorefinery platform for the treatment of agro-waste and the production of hydrogen, methane and volatile fatty acids was studied in real environment. The system adopted was a two stage anaerobic process where hydrogen and volatile fatty acids were produced in the first phase (fermentation) and methane in the second one (digestion). The study demonstrated the possibility to produce a biogas composed by hydrogen and methane (10% and 55%, respectively) while recovering volatile fatty acids. The yield for acids production was equivalent to 0.13\uffc2\uffa0gVFA/gTVS (as COD) with acetate and butyrate as dominant observed species.

Graphic Abstra", "keywords": ["Horizon 2020", "Environmental Engineering", "Circular economy", "Renewable Energy", " Sustainability and the Environment", "Polyhydroxyalkanoates", "7. Clean energy", "01 natural sciences", "6. Clean water", "Biorefinery", "12. Responsible consumption", "Bio-economy", "Bioresource recovery", "Euratom", "13. Climate action", "Volatile fatty acids", "European Union (EU)", "Waste Management and Disposal", "Agricultural waste", "0105 earth and related environmental sciences"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s12649-020-01023-3.pdf"}, {"href": "https://doi.org/10.1007/s12649-020-01023-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Waste%20and%20Biomass%20Valorization", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s12649-020-01023-3", "name": "item", "description": "10.1007/s12649-020-01023-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s12649-020-01023-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-26T00:00:00Z"}}, {"id": "10.1007/s13399-019-00590-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:45Z", "type": "Journal Article", "created": "2020-01-02", "title": "Nutrient recycling: from waste to crop", "description": "Abstract

Within the transition to a bio-based economy from a fossil reserve-based world, we face the vital dare of closing nutrient cycles and moving to a more practical and balanced resource management, taking into account not only the economical but also the environmental perspective. The manufacture and transportation of mineral fertilizers are activities that require large amounts of fossil energy. Therefore, the dependence that agriculture has on fertilizers based on mineral reserves (mainly P, N, and K) should be considered as a very serious threat to human food security and climate change. On the other hand, the existing forecast on phosphorus reserves is pessimistic. According to the latest published figures on population growth and estimated demand for nutrients in the future, depletion of this material is expected to occur within a maximum of 300\uffc2\uffa0years. At the same time, the agricultural demand that exists for mineral fertilizers is constantly growing. The main reason is the increase in the world population, together with the increase in meat consumption and the popularity of energy crops. Despite these negative perspectives, the processing or elimination of waste streams causes uncontrolled dispersion in the environment of a large amount of minerals. Thus, a new global effort is needed to draw a new scenario where improved nutrient use efficiency and, at the same time, reduced nutrient losses provide the bases for a more circular economy, to produce more necessary inputs, as food or energy, as the same time as decreasing environmental impact. This paper will show the process options which can \uffe2\uff80\uff9cupcycle\uffe2\uff80\uff9d and recover residual nutrients to high-quality end-products, defined by efficient nutrient use and will reveal the key issues to face with novel biofertilizer products and changing policies.

", "keywords": ["2. Zero hunger", "13. Climate action", "11. Sustainability", "15. Life on land", "European Commission", "01 natural sciences", "7. Clean energy", "6. Clean water", "0105 earth and related environmental sciences", "12. Responsible consumption"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s13399-019-00590-3.pdf"}, {"href": "https://doi.org/10.1007/s13399-019-00590-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biomass%20Conversion%20and%20Biorefinery", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s13399-019-00590-3", "name": "item", "description": "10.1007/s13399-019-00590-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s13399-019-00590-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-01-02T00:00:00Z"}}, {"id": "10.1016/j.agsy.2021.103251", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:02Z", "type": "Journal Article", "created": "2021-09-08", "title": "Manure management and soil biodiversity: Towards more sustainable food systems in the EU", "description": "In this review, authors explored the impact of manure from farmed animals on soil biodiversity by considering factors that determine the effects of manure and vice versa. By evaluating manure's potential to enhance soil biodiversity, but also its environmental risks, authors assessed current and future EU policy and legislations with the ultimate aim of providing recommendations that can enable a more sustainable management of farm manures. This work was funded by the European Commission Horizon 2020 project SoildiverAgro [grant agreement 817819].", "keywords": ["2. Zero hunger", "Common agricultural policy; Environmental policy; Nutrient losses; Soil organisms; Agricultural practices; Sustainability; European Union", "04 agricultural and veterinary sciences", "2511.08 Mec\u00e1nica de Suelos (Agricultura)", "15. Life on land", "16. Peace & justice", "01 natural sciences", "ddc:", "12. Responsible consumption", "2511 Ciencias del Suelo (Edafolog\u00eda)", "2511.06 Conservaci\u00f3n de Suelos", "13. Climate action", "11. Sustainability", "0401 agriculture", " forestry", " and fisheries", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.agsy.2021.103251"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20Systems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agsy.2021.103251", "name": "item", "description": "10.1016/j.agsy.2021.103251", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agsy.2021.103251"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-12-01T00:00:00Z"}}, {"id": "10.1016/j.agrformet.2020.108031", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:01Z", "type": "Journal Article", "created": "2020-05-29", "title": "Inter-individual variability in spring phenology of temperate deciduous trees depends on species, tree size and previous year autumn phenology", "description": "We explored the inter-individual variability in bud-burst and its potential drivers, in homogeneous mature stands of temperate deciduous trees. Phenological observations of leaves and wood formation were performed weekly from summer 2017 to summer 2018 for pedunculate oak, European beech and silver birch in Belgium. The variability of bud-burst was correlated to previous' year autumn phenology (i.e. the onset of leaf senescence and the cessation of wood formation) and tree size but with important differences among species. In fact, variability of bud-burst was primarily related to onset of leaf senescence, cessation of wood formation and tree height for oak, beech and birch, respectively. The inter-individual variability of onset of leaf senescence was not related to the tree characteristics considered and was much larger than the inter-individual variability in bud-burst. Multi-species multivariate models could explain up to 66% of the bud-burst variability. These findings represent an important advance in our fundamental understanding and modelling of phenology and tree functioning of deciduous tree species.", "keywords": ["Agriculture and Food Sciences", "0106 biological sciences", "Atmospheric Science", "polno olistanje", "Broadleaved forest", "Silver birch", "Edellauvskog", "coloration", "01 natural sciences", "fenologija", "navadna bukev", "Pedunculate oak", "FAGUS-SYLVATICA", "PHLOEM", "Global and Planetary Change", "LEAF PHENOLOGY", "CLIMATE-CHANGE", "VDP::\u00d8kologi: 488", "Physics", "Forestry", "VDP::Ecology: 488", "04 agricultural and veterinary sciences", "dob", "navadna breza", "Chemistry", "Phenology", "info:eu-repo/classification/udc/630*811", "rumenenje listov", "XYLEM", "MODELS", "Article", "leaf unfolding", "Fenologi", "Coloration", "nastanek lesa", "Biology", "Wood formation", "kambij", "Leaf unfolding", "RADIAL GROWTH", "15. Life on land", "listavci", "European beech", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "SENESCENCE", "13. Climate action", "wood formation", "0401 agriculture", " forestry", " and fisheries", "[SDE.BE]Environmental Sciences/Biodiversity and Ecology", "Agronomy and Crop Science"]}, "links": [{"href": "https://doi.org/10.1016/j.agrformet.2020.108031"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Forest%20Meteorology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agrformet.2020.108031", "name": "item", "description": "10.1016/j.agrformet.2020.108031", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agrformet.2020.108031"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-08-01T00:00:00Z"}}, {"id": "10.1016/j.agrformet.2022.108823", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:01Z", "type": "Journal Article", "created": "2022-01-20", "title": "Timing leaf senescence : a generalized additive models for location, scale and shape approach", "description": "Accurate estimations of phenophases in deciduous trees are important to understand forest ecosystems and their feedback on the climate. In particular, the timing of leaf senescence is of fundamental importance to trees' nutrient stoichiometry and drought tolerance and therefore to trees' vigor and fecundity. Nevertheless, there is no integrated view on the significance, and direction, of seasonal trends in leaf senescence, especially for years characterized by extreme weather events. Difficulties in the acquisition and analyses of hierarchical data can account for this. We collected four years of chlorophyll content index (CCI) measurements in thirty-eight individuals of four deciduous tree species (Betula pendula, Fagus sylvatica, Populus tremula and Quercus robur) in Belgium, Norway and Spain, and analyzed these data using generalized additive models for location, scale and shape (GAMLSS). As a result, (I) the phenological strategy and seasonal trend of leaf senescence in these tree species could be clarified for exceptionally dry and warm years, and (II) the daily average (air) temperature, global radiation, and vapor pressure deficit could be established as main drivers behind the variation in the timing of the senescence transition date. Our results show that the onset of the re-organization phase in the leaf senescence, which we approximated and defined as local minima in the second derivative of a CCI graph, was in all species mainly negatively affected by the average temperature, global radiation and vapor pressure deficit. All together the variables explained 89 to 98% of the variability in the leaf senescence timing. An additional finding is that the generalized beta type 2 and generalized gamma distributions are well suited to model the chlorophyll content index, while the senescence transition date can be modeled using the normal-exponential-student-t, generalized gamma and zero-inflated Box-Cox Cole and Green distributions for beech, oak and birch, and poplar, respectively.", "keywords": ["0106 biological sciences", "Physics", "ta1183", "Silver birch", "15. Life on land", "01 natural sciences", "Generalized additive models for location", "Scale and shape", "European beech", "Pedunculate oak", "Chemistry", "Leaf senescence", "13. Climate action", "European aspen", "ta1181", "0101 mathematics", "Biology"]}, "links": [{"href": "https://doi.org/10.1016/j.agrformet.2022.108823"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Forest%20Meteorology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agrformet.2022.108823", "name": "item", "description": "10.1016/j.agrformet.2022.108823", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agrformet.2022.108823"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-03-01T00:00:00Z"}}, {"id": "10.1016/j.cofs.2020.11.012", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:22Z", "type": "Journal Article", "created": "2020-12-09", "title": "Environmental microbiome mapping as a strategy to improve quality and safety in the food industry", "description": "In food industries, an environmentally-adapted microbiome can colonize the surfaces of equipment and tools and be transferred to the food product or intermediates of production. These complex microbial consortia may include microbial spoilers, pathogens, as well as beneficial microbes. Advances in sequencing technologies and metagenomics provide the opportunity to map the environmental microbiome in food industries at an unprecedented depth, highlighting the importance of the resident microbial communities in influencing food quality and safety, as well as the main factors shaping its composition and activities. However, specific technical issues must be considered. Although microbiome mapping in the food industry has the potential to revolutionize food safety and quality management systems, its application as routine practice is still challenging and technical issues limit the exploitation of the powerful information that can be obtained by the application of such state-of-the-art approaches.", "keywords": ["Aurora Universities Network", "0301 basic medicine", "2. Zero hunger", "0303 health sciences", "EC", "food industry", "H2020", "food quality", "Applied Microbiology and Biotechnology", "Horizon 2020 Framework Programme", "Innovation action", "food safety", "03 medical and health sciences", "contamination", "13. Climate action", "Metagenomics", "European Commission", "Knowmad Institut", "environmental microbiome", "Food Science"]}, "links": [{"href": "https://www.iris.unina.it/bitstream/11588/828326/1/COFS%2c2021_EnvMapping.pdf"}, {"href": "https://doi.org/10.1016/j.cofs.2020.11.012"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Current%20Opinion%20in%20Food%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.cofs.2020.11.012", "name": "item", "description": "10.1016/j.cofs.2020.11.012", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.cofs.2020.11.012"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-01T00:00:00Z"}}, {"id": "10.1016/j.colsurfb.2023.113433", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:22Z", "type": "Journal Article", "created": "2023-06-28", "title": "Contrasting transport and fate of hydrophilic and hydrophobic bacteria in wettable and water-repellent porous media: Straining or attachment?", "description": "Bacterial transport and retention likely depend on bacterial and soil surface properties, especially hydrophobicity. We used a controlled experimental setup to explore hydrophilic Escherichia coli (E. coli) and hydrophobic Rhodococcus erythropolis (PTCC1767) (R. erythropolis) transport through dry (-\u00a015,000\u00a0cm water potential) and water saturated (0\u00a0cm water potential) wettable and water-repellent sand columns. A pulse of bacteria (1\u00a0\u00d7\u00a0108 CFU mL-1) and bromide (10\u00a0mmol\u00a0L-1) moved through the columns under saturated flow (0\u00a0cm) for four pore volumes. A second bacteria and bromide pulse was then poured on the column surfaces and leaching was extended six more pore volumes. In dry wettable sand attachment dominated E. coli retention, whereas R. erythropolis was dominated by straining. Once wetted, the dominant retention mechanisms flipped between these bacteria. Attachment by either bacteria decreased markedly in water-repellent sand, so straining was the main retention mechanism. We explain this from capillary potential energy, which enhanced straining under the formation of water films at very early times (i.e., imbibing) and film thinning at much later times (i.e., draining). The interaction between the hydrophobicity of bacteria and soil on transport, retention and release mechanisms needs greater consideration in predictions.", "keywords": ["Bromides", "2040 Environment and Biodiversity", "570", "Supplementary Information", "Wetting characteristics", "Vadose zone", "610", "Soil", "Colloid and Surface Chemistry", "Sand", "Pore-scale processes", "Escherichia coli", "Physical and Theoretical Chemistry", "European Commission", "101026287", "SDG 15 - Life on Land", "Drought", "T", "Water", "Surfaces and Interfaces", "T Technology", "Interfacial processes", "3. Good health", "TC Hydraulic engineering. Ocean engineering", "Marie Sklodowska-Curie grant", "EU Horizon 2020", "SDG 6 - Clean Water and Sanitation", "TC", "Porosity", "Hydrophobic and Hydrophilic Interactions", "Biotechnology"]}, "links": [{"href": "https://doi.org/10.1016/j.colsurfb.2023.113433"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Colloids%20and%20Surfaces%20B%3A%20Biointerfaces", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.colsurfb.2023.113433", "name": "item", "description": "10.1016/j.colsurfb.2023.113433", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.colsurfb.2023.113433"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-08-01T00:00:00Z"}}, {"id": "10.1016/j.cub.2020.09.063", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:24Z", "type": "Journal Article", "created": "2020-10-15", "title": "Newly explored\u00a0Faecalibacterium\u00a0diversity is connected to age, lifestyle, geography, and disease.", "description": "Faecalibacterium is prevalent in the human gut and a promising microbe for the development of next-generation probiotics (NGPs) or biotherapeutics. Analyzing reference Faecalibacterium genomes and almost 3,000 Faecalibacterium-like metagenome-assembled genomes (MAGs) reconstructed from 7,907 human and 203 non-human primate gut metagenomes, we identified the presence of 22 different Faecalibacterium-like species-level genome bins (SGBs), some further divided in different strains according to the subject geographical origin. Twelve SGBs are globally spread in the human gut and show different genomic potential in the utilization of complex polysaccharides, suggesting that higher SGB diversity may be related with increased utilization of plant-based foods. Moreover, up to 11 different species may co-occur in the same subject, with lower diversity in Western populations, as well as intestinal inflammatory states and obesity. The newly explored Faecalibacterium diversity will be able to support the choice of strains suitable as NGPs, guided by the consideration of the differences existing in their functional potential.", "keywords": ["Adult", "0301 basic medicine", "pangenome", "Adolescent", "gut microbiome", "Datasets as Topic", "General Biochemistry", " Genetics and Molecular Biology", "Innovation action", "Feces", "03 medical and health sciences", "Animals", "Humans", "biotherapeutics", "European Commission", "Child", "Life Style", "Faecalibacterium", "Aged", "Aurora Universities Network", "Horizon 2020", "0303 health sciences", "EC", "Geography", "Faecalibacterium prausnitzii", "H2020", "Age Factors", "Infant", "Middle Aged", "Gastrointestinal Microbiome", "Faecalibacterium prausnitzii", " gut microbiome", " strain diversity", " pangenome", " novel probiotics", " biotherapeutics", "Child", " Preschool", "novel probiotics", "Dysbiosis", "Macaca", "Metagenome", "strain diversity", "Metagenomics", "General Agricultural and Biological Sciences"]}, "links": [{"href": "https://www.iris.unina.it/bitstream/11588/819607/1/PIIS0960982220314330.pdf"}, {"href": "https://doi.org/10.1016/j.cub.2020.09.063"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Current%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.cub.2020.09.063", "name": "item", "description": "10.1016/j.cub.2020.09.063", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.cub.2020.09.063"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-12-01T00:00:00Z"}}, {"id": "10.1098/rspa.2018.0149", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:07Z", "type": "Journal Article", "created": "2018-09-05", "title": "The effect of root exudates on rhizosphere water dynamics", "description": "

Most water and nutrients essential for plant growth travel across a thin zone of soil at the interface between roots and soil, termed the rhizosphere. Chemicals exuded by plant roots can alter the fluid properties, such as viscosity, of the water phase, potentially with impacts on plant productivity and stress tolerance. In this paper, we study the effects of plant exudates on the macroscale properties of water movement in soil. Our starting point is a microscale description of two fluid flow and exudate diffusion in a periodic geometry composed from a regular repetition of a unit cell. Using multiscale homogenization theory, we derive a coupled set of equations that describe the movement of air and water, and the diffusion of plant exudates on the macroscale. These equations are parametrized by a set of cell problems that capture the flow behaviour. The mathematical steps are validated by comparing the resulting homogenized equations to the original pore scale equations, and we show that the difference between the two models is \uffe2\uff89\uffb27% for eight cells. The resulting equations provide a computationally efficient method to study plant\uffe2\uff80\uff93soil interactions. This will increase our ability to predict how contrasting root exudation patterns may influence crop uptake of water and nutrients.

", "keywords": ["Richards\u2019 equation", "General Mathematics", "Porous media", "General Physics and Astronomy", "630", "646809DIMR", "QD", "BB/L025620/1", "/dk/atira/pure/subjectarea/asjc/2600/2600", "name=General Engineering", "BB/J00868/1", "NE/L00237/1", "/dk/atira/pure/subjectarea/asjc/2200/2200", "Research Articles", "Homogenization", "Natural Environment Research Council (NERC)", "General Engineering", "04 agricultural and veterinary sciences", "15. Life on land", "QD Chemistry", "name=General Mathematics", "EP/P020887/1", "Engineering and Physical Sciences Research Council (EPSRC)", "name=General Physics and Astronomy", "13. Climate action", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "/dk/atira/pure/subjectarea/asjc/3100/3100", "BB/P004180/1", "European Research Council"]}, "links": [{"href": "https://eprints.soton.ac.uk/423010/1/Paper_Final.pdf"}, {"href": "https://royalsocietypublishing.org/doi/pdf/10.1098/rspa.2018.0149"}, {"href": "https://doi.org/10.1098/rspa.2018.0149"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20Royal%20Society%20A%3A%20Mathematical%2C%20Physical%20and%20Engineering%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1098/rspa.2018.0149", "name": "item", "description": "10.1098/rspa.2018.0149", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1098/rspa.2018.0149"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-09-01T00:00:00Z"}}, {"id": "10.1016/j.eja.2019.125974", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:30Z", "type": "Journal Article", "created": "2019-11-29", "title": "Protein-rich legume and pseudo-cereal crop suitability under present and future European climates", "description": "Abstract Replacing animal proteins with plant proteins in diets has been demonstrated to have both health and environmental advantages, driving a debate about the potential of protein-rich crops as dietary replacements for animal products. However, there is a lack of knowledge on how climate change could influence the potential for producing protein-rich crops. This study addresses this knowledge gap for the European Union. We analysed 13 protein-rich crops, using the crop suitability model EcoCrop and climate projections for the 2050s, based on 30 Global Circulation Models, under the Representative Concentration Pathway 4.5. The results suggest that current protein-rich crop distributions reflect climatic suitability. We demonstrate the heterogeneous impacts of climate change on crop suitability. In general, conditions in northern Europe were modelled to become more favourable for protein-rich crops, while in southern Europe modelled future climates limit the production of traditional protein-rich crops commonly grown there, including chickpea and lentil. Model results show an expanded area of high suitability for quinoa. Our results confirm the need for concerted breeding and research planning strategies to improve the tolerance of faba bean, lentil, and chickpea to the abiotic stresses that are predicted to become more common with climate change. At the same time, production in northern Europe can benefit from experimentation with protein-rich crops predicted to become more suitable there. Production planning and agricultural policy should consider these likely impacts, to encourage shifts that follow the emerging geographic patterns of crop suitability, and to support the resilience of protein-rich crop production in regions that may be negatively impacted by climate change.", "keywords": ["2. Zero hunger", "Horizon 2020", "abiotic stress", "EC", "legumes", "H2020", "Soil Science", "Plant Science", "04 agricultural and veterinary sciences", "15. Life on land", "crops", "Energy Research", "01 natural sciences", "proteins", "Research and Innovation action", "climate change", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "European Commission", "Agronomy and Crop Science", "Knowmad Institut", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.eja.2019.125974"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/European%20Journal%20of%20Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.eja.2019.125974", "name": "item", "description": "10.1016/j.eja.2019.125974", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.eja.2019.125974"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-02-01T00:00:00Z"}}, {"id": "10.1016/j.ejsobi.2023.103590", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:32Z", "type": "Journal Article", "created": "2024-01-17", "title": "Testing the impacts of invasive jumping worms at their northern range limit", "description": "

Earthworms can act as ecosystem engineers by altering soil structure, which impacts other organisms and ecosystem functioning. Jumping worms (family Megascolecidae) originating in Asia have been spreading in North America, extending their northern range limits to Ontario, Canada in the last decade and to New Brunswick in 2021. At the northern limits of their current range, little research has been done to examine the effects of jumping worms in these new habitats since their recent establishment. Our objectives were to evaluate: (1) how jumping worms impact soil nitrogen and soil carbon; (2) how their presence impacts the abundance of non-native European earthworms (family Lumbricidae); and (3) whether two sampling methods (i.e., mustard solution and wooden discs) are equally effective at detecting jumping worms. We sampled a residential property in Oromocto, New Brunswick, which was the first location where jumping worms were found in the province. Jumping worms did not have significant impacts on the abundance and biomass of European earthworms or soil carbon content in the top 5 cm of the soil, but they did significantly affect soil nitrogen levels. Both sampling methods were equally effective at detecting the presence of jumping worms. Further research is needed in managed landscapes, urban areas, and forests to determine the ecosystem impacts and invasion dynamics of jumping worms in Canada as this invasion progresses.

", "keywords": ["0106 biological sciences", "Ecosystem engineer", "13. Climate action", "Megascolecidae", "Non-native species", "European earthworm", "Citizen science", "15. Life on land", "01 natural sciences", "Lumbricidae", "Community science"]}, "links": [{"href": "https://doi.org/10.1016/j.ejsobi.2023.103590"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/European%20Journal%20of%20Soil%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ejsobi.2023.103590", "name": "item", "description": "10.1016/j.ejsobi.2023.103590", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ejsobi.2023.103590"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-03-01T00:00:00Z"}}, {"id": "10.1016/j.envint.2022.107555", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:34Z", "type": "Journal Article", "created": "2022-09-30", "title": "The European exposure science strategy 2020\u20132030", "description": "Open AccessISSN:1873-6750", "keywords": ["Human exposure", "Ecosystem exposure", "01 natural sciences", "12. Responsible consumption", "3. Good health", "Environmental sciences", "Europe", "03 medical and health sciences", "13. Climate action", "11. Sustainability", "Exposure assessment", "Humans", "Safe and sustainable-by-design (SSbD)", "Human exposure; Ecosystem exposure; Exposure assessment; Risk assessment; Safe and sustainable-by-design (SSbD); International Society of Exposure Science", "GE1-350", "International Society of Exposure Science", "/dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_being; name=SDG 3 - Good Health and Well-being", "European Union", "0305 other medical science", "Environmental Sciences", "Ecosystem", "Risk assessment", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envint.2022.107555"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environment%20International", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envint.2022.107555", "name": "item", "description": "10.1016/j.envint.2022.107555", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envint.2022.107555"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-12-01T00:00:00Z"}}, {"id": "10.1016/j.firesaf.2017.03.082", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:41Z", "type": "Journal Article", "created": "2017-05-20", "title": "Pyrolysis kinetics and multi-objective inverse modelling of cellulose at the microscale", "description": "Abstract The chemistry of pyrolysis, together with heat transfer, drives ignition and flame spread of biomass materials under many fire conditions, but it is poorly understood. Cellulose is the main component of biomass and is often taken as a surrogate for biomass. Its chemistry of pyrolysis is simpler and dominates the pyrolysis of biomass. Many reaction schemes with corresponding kinetic parameters can be found in the literature for the pyrolysis of cellulose, but their appropriateness for fire is unknown. This study investigated inverse modelling and blind predictions of six reaction schemes of different complexities for isothermal and non-isothermal thermogravimetric experiments. We used multi-objective optimisation to simultaneously and separately inverse model the kinetic parameters of each reaction scheme to several experiments. Afterwards we tested these parameters with blind predictions. For the first time, we reveal a set of equally viable solutions for the modelling of pyrolysis chemistry of different experiments. This set of solutions is called a Pareto front, and represents a trade-off between predictions of different experiments. It stems from the uncertainty in the experiments and in the modelling. Parameters derived from non-isothermal experiments compared well with the literature, and performed well in blind predictions of both isothermal and non-isothermal experiments. Complexity beyond the Broido-Shafizadeh scheme with seven parameters proved to be unnecessary to predict the mass loss of cellulose; hence, simple reaction schemes are most appropriate for macroscale fire models. Modellers should, therefore, use simple reaction schemes to model pyrolysis in macroscale fire models.", "keywords": ["13. Climate action", "0904 Chemical Engineering", "General Physics and Astronomy", "General Materials Science", "General Chemistry", "Building and Construction", "624", "540", "Safety", " Risk", " Reliability and Quality", "Civil Engineering", "7. Clean energy", "European Research Council"], "contacts": [{"organization": "Richter, F, Rein, G,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.firesaf.2017.03.082"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Fire%20Safety%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.firesaf.2017.03.082", "name": "item", "description": "10.1016/j.firesaf.2017.03.082", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.firesaf.2017.03.082"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-07-01T00:00:00Z"}}, {"id": "10.1016/j.gexplo.2025.107868", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:58Z", "type": "Journal Article", "created": "2025-07-21", "title": "Improving spatial interpolation for anomaly analysis in presence of sparse, clustered or imprecise data sets", "description": "In this study, we present a new method of interpolation and anomaly detection especially designed for sparse, clustered or imprecise environmental data (SIC). Such data cannot be processed by current state of the art spatial methods and models, including the most widely used, such as kriging. Indeed, the statistics obtained on SIC data (on the order of 5\u201330) do not allow us to define a covariance or to calibrate the numerous hyper-parameters of sophisticated Bayesian or deep image prior models. We therefore adapted an information dissemination algorithm to handle SIC data. This probabilistic model has been enriched (anisotropy, de-clustering, auto-variography, multi-support, treatment of covariates, and censored data) in a way that fully meets the needs for environmental SIC data and can be used in conjunction with hybrid propagation of epistemic and aleatoric uncertainties and anomaly detection, whatever their mathematical form. The new interpolator for anomaly detection was applied on a very small set of 13 sparse data points characteristic of small-scale environmental studies, on digital-challenge datasets and on two real datasets, i.e., a large-scale geochemical dataset and a SIC urban soil dataset. Results highlight the added value of the proposed algorithm, that is able to pinpoint anomalies in SIC data, while avoiding in particular the smoothing effects of certain previous methods", "keywords": ["Sparse clustered", "Uncertainty", "[SDU.STU] Sciences of the Universe [physics]/Earth Sciences", "Spatial interpolation", "Anomaly detection", "European geochemistry"], "contacts": [{"organization": "Belb\u00e8ze, St\u00e9phane, Rohmer, J\u00e9r\u00e9my, Guyonnet, Dominique, N\u00e9grel, Philippe, Tarvainen, Timo,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.gexplo.2025.107868"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Geochemical%20Exploration", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.gexplo.2025.107868", "name": "item", "description": "10.1016/j.gexplo.2025.107868", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.gexplo.2025.107868"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-12-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2024.116862", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:16:57Z", "type": "Journal Article", "created": "2024-03-27", "title": "Is the organic carbon-to-clay ratio a reliable indicator of soil health?", "description": "Climate action plans under the Paris Climate Agreement and other national commitments aimed at improving soil-based ecosystem services require the operational monitoring of soil carbon (C). The European Union is aiming to enhance soil health, and as part of the proposed Soil Monitoring Law, the European Commission recommends the monitoring of the soil C loss indicator among other soil health indicators. In this study, we evaluate the feasibility of the proposed soil C loss indicator by assessing its performance using the EU-wide 2009 LUCAS soil survey data. The proposed indicator is the soil organic carbon (SOC) to clay ratio, with a threshold value of 1:13. The results are also compared with the C stock changes reported by countries to the climate convention (UNFCCC). Our results reveal that the variation in SOC and clay content at European scale exceeds that of the data used to develop the proposed indicator. We also found that the variation in the SOC content was influenced not only by clay content but also by climate and land-use reflecting C input levels. Therefore, the defined threshold is inadequate for detecting degraded soils if the SOC and clay content are beyond the conditions used to establish the criteria. Furthermore, major discrepancies were observed between the soil carbon stock changes reported by the national greenhouse gas (GHG) inventories and the proportions of degraded soils identified by using the soil C loss indicator. We conclude that employing a single indicator such as SOC:Clay ratio with one threshold value for all soils across various land covers, management practices, and climatic conditions, as defined by the European Commission for the Soil Monitoring Law, is inappropriate for monitoring soil C loss.", "keywords": ["2. Zero hunger", "agricultural soil", "550", "Forest soil", " agricultural soil", "Science", "Q", "Soil organic carbon (SOC)", "Soil monitoring", "04 agricultural and veterinary sciences", "SOC:Clay ratio", "15. Life on land", "forest soil", "01 natural sciences", "630", "6. Clean water", "12. Responsible consumption", "soil organic carbon", "13. Climate action", "soil monitoring", "LUCAS soil survey", "11. Sustainability", "soc:clay ratio", "0401 agriculture", " forestry", " and fisheries", "European mineral soils", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2024.116862"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2024.116862", "name": "item", "description": "10.1016/j.geoderma.2024.116862", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2024.116862"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-01T00:00:00Z"}}, {"id": "10.1016/j.jece.2020.104657", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:17:04Z", "type": "Journal Article", "created": "2020-10-24", "title": "Reductive/oxidative sequential bioelectrochemical process for Perchloroethylene (PCE) removal: effect of the applied reductive potential and microbial community characterization", "description": "Abstract In this paper, a bioelectrochemical process has been developed by the combination of two membrane-less reactors equipped with an internal graphite granules counterelectrode for the perchloroethylene (PCE) removal through a reductive/oxidative sequence. In the reductive reactor, the cathodic chamber supplied the reducing power to PCE dechlorinating biomass while a rutile electrode promoted the aerobic dechlorination of the less chlorinated PCE byproducts by oxygen in situ evolution. Two potentiostatic conditions, -350 and -550 mV vs SHE, were tested on the reductive reactor, which showed the capability to completely reduce the PCE into vinyl chloride (VC) and ethylene (Eth). These compounds were completely removed by the oxidative reactor with an average VC and Eth removal efficiency of 94 \u00b1 1% and 98 \u00b1 1%. The -350 mV vs SHE condition resulted in the higher coulombic efficiency for the reductive dechlorination which reached 22 \u00b1 7 % while by increasing the reductive potential to -550 mV the coulombic efficiency drop down to 6 \u00b1 1 % in favor of the methanogenesis reaction. Dehalococcoides mccartyi was found at high abundance in the reducing reactor while a heterogeneous bacterial consortium was observed in the oxidative reactor. Microbiome characterization of the reductive and oxidative reactors showed the concomitant presence of different redox niches in each compartment suggesting that the exchange of ionic species between the electrode and the counterelectrode allowed the co-existence of both reducing and oxidative reactions.", "keywords": ["0301 basic medicine", "0303 health sciences", "EC", "reductive dechlorination; oxidative dechlorination; bioremediation; bioelectrochemical systems; chlorinated aliphatic hydrocarbons; groundwater remediation", "Reductive dechlorination", "Process Chemistry and Technology", "H2020", "Pollution", "Horizon 2020 Framework Programme", "6. Clean water", "Research and Innovation action", "Bioelectrochemical systems", "03 medical and health sciences", "bioremediation", "Chemical Engineering (miscellaneous)", "European Commission", "Waste Management and Disposal"]}, "links": [{"href": "https://doi.org/10.1016/j.jece.2020.104657"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Environmental%20Chemical%20Engineering", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jece.2020.104657", "name": "item", "description": "10.1016/j.jece.2020.104657", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jece.2020.104657"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-02-01T00:00:00Z"}}, {"id": "10.1016/j.jenvman.2024.121882", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:17:06Z", "type": "Journal Article", "created": "2024-07-17", "title": "A systematic benchmarking framework for future assessments of soil health: An example from Denmark", "description": "Based on current evidence and established critical thresholds for soil degradation indicators, it is concerning that over 60-70% of European soils are unhealthy due to unsustainable management and the impact of climate change. Despite European and national efforts to improve soil health, significant gaps remain. The proposal for a Soil Monitoring and Resilience Law, to be implemented by the European Union, seeks to establish a framework for soil monitoring and promote sustainable management practices to achieve healthy soils by 2050. This requires extensive data collection and soil monitoring systems to accurately estimate soil health across Europe, considering the diversity of soil types, climates, and land uses. To establish a framework for soil monitoring, we must understand the site-specific status of soil and the ranges of soil health indicators across specific pedoclimatic regions. In our study, we evaluated the soil status in agricultural areas in Denmark using soil health indicators and a site-specific benchmarking approach. We compiled nationally representative datasets, combining point and model-informed data of soil parameters such as organic carbon content, bulk density, pH, electrical conductivity, clay-to-soil organiccarbon ratio, water erosion, and nitrogen leaching. By categorizing Danish agricultural soils into monitoring units based on textural classes, landscape elements, and wetland types, we calculated benchmarks for these indicators, considering different cropping systems. Our approach provided detailed point-based results and a spatially explicit overview of the status of soil health indicators in Denmark. We identified areas where soil deviates from the benchmarks of different indicators. Such deviations might indicate soil functions operating outside the normal range, posing potential threats to soil health. This proposed framework could support the establishment of a baseline for assessing the directionality of future changes in soil health. Moreover, it is adaptable for implementation by other countries to support assessments of soil health.", "keywords": ["2. Zero hunger", "Conservation of Natural Resources", "European soil monitoring and resilience law", "Soil monitoring units", "Denmark", "Climate Change", "Agriculture", "15. Life on land", "6. Clean water", "12. Responsible consumption", "Soil districts", "Soil", "13. Climate action", "11. Sustainability", "Soil health indicators", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.1016/j.jenvman.2024.121882"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Environmental%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jenvman.2024.121882", "name": "item", "description": "10.1016/j.jenvman.2024.121882", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jenvman.2024.121882"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-08-01T00:00:00Z"}}, {"id": "10.1016/j.nbt.2019.10.010", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:17:11Z", "type": "Journal Article", "created": "2019-11-12", "title": "Advances in combined enzymatic extraction of ferulic acid from wheat bran", "description": "Wheat bran could be utilised as feedstock for innovative and sustainable biorefinery processes. Here, an enzymatic hydrolysis process for ferulic acid (FA) extraction was optimised step by step for total wheat bran (Tritello) and then also applied to the outer bran layer (Bran 1). Proteins, reducing sugars, total phenols and FA were quantified. The highest FA yields (0.82-1.05\u202fg/kg bran) were obtained either by rehydrating the bran by autoclaving (Tritello) or by steam explosion (Bran 1) using a bran/water ratio of 1:20, followed by enzymatic pre-treatment with Alcalase and Termamyl, to remove protein and sugars, and a final enzymatic hydrolysis with Pentopan and feruloyl esterase to solubilise phenol. FA was recovered from the final digestate via solid phase extraction. A 40-fold scale-up was also performed and the release of compounds along all the process steps and at increasing incubation times was monitored. Results showed that FA was initially present at a minimum level while it was specifically released during the enzymatic treatment. In the final optimized process, the FA extraction yield was higher than that obtained with NaOH control hydrolysis while, in comparison with other FA enzymatic extraction methods, fewer process steps were required and no buffers, strong acid/alkali nor toxic compounds were used. Furthermore, the proposed process may be easily scaled-up, confirming the feasibility of wheat bran valorisation by biorefinery processes to obtain valuable compounds having several areas of potential industrial exploitation.", "keywords": ["Dietary Fiber", "0106 biological sciences", "0301 basic medicine", "Coumaric Acids", "Bioengineering", "Wheat bran", "01 natural sciences", "Bio-based Industries Innovation action - Demonstration", "Enzymatic extraction", "03 medical and health sciences", "Subtilisins", "European Commission", "Molecular Biology", "Knowmad Institut", "2. Zero hunger", "EC", "Hydrolysis", "H2020", "Polyphenols", "General Medicine", "Ferulic acid", "Biorefinery", "Biorefinery; Enzymatic extraction; Ferulic acid; Polyphenols; Steam explosion; Wheat bran", "Steam explosion", "alpha-Amylases", "Biotechnology"]}, "links": [{"href": "https://cris.unibo.it/bitstream/11585/706995/1/Ferri%20et%20al%202020%20New%20Biotech.pdf"}, {"href": "https://doi.org/10.1016/j.nbt.2019.10.010"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Biotechnology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.nbt.2019.10.010", "name": "item", "description": "10.1016/j.nbt.2019.10.010", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.nbt.2019.10.010"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-05-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2018.10.441", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:17:20Z", "type": "Journal Article", "created": "2018-11-06", "title": "Pesticide residues in European agricultural soils \u2013 A hidden reality unfolded", "description": "Pesticide use is a major foundation of the agricultural intensification observed over the last few decades. As a result, soil contamination by pesticide residues has become an issue of increasing concern due to some pesticides' high soil persistence and toxicity to non-target species. In this study, the distribution of 76 pesticide residues was evaluated in 317 agricultural topsoil samples from across the European Union. The soils were collected in 2015 and originated from 11 EU Member States and 6 main cropping systems. Over 80% of the tested soils contained pesticide residues (25% of samples had 1 residue, 58% of samples had mixtures of two or more residues), in a total of 166 different pesticide combinations. Glyphosate and its metabolite AMPA, DDTs (DDT and its metabolites) and the broad-spectrum fungicides boscalid, epoxiconazole and tebuconazole were the compounds most frequently found in soil samples and the compounds found at the highest concentrations. These compounds occasionally exceeded their predicted environmental concentrations in soil but were below the respective toxic endpoints for standard in-soil organisms. Maximum individual pesticide content assessed in a soil sample was 2.05\u202fmg\u202fkg-1 while maximum total pesticide content was 2.87\u202fmg\u202fkg-1. This study reveals that the presence of mixtures of pesticide residues in soils are the rule rather than the exception, indicating that environmental risk assessment procedures should be adapted accordingly to minimize related risks to soil life and beyond. This information can be used to implement monitoring programs for pesticide residues in soil and to trigger toxicity assessments of mixtures of pesticide residues on a wider range of soil species in order to perform more comprehensive and accurate risk assessments.", "keywords": ["2. Zero hunger", "Mixtures of pesticide residues", "Predicted environmental concentrations in soil (PECs)", "13. Climate action", "Agricultural soils", "European Union", "15. Life on land", "01 natural sciences", "6. Clean water", "Risk assessment", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2018.10.441"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2018.10.441", "name": "item", "description": "10.1016/j.scitotenv.2018.10.441", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2018.10.441"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-02-01T00:00:00Z"}}, {"id": "10.1021/es103410q", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:18:00Z", "type": "Journal Article", "created": "2011-02-14", "title": "Identification Of \u2018Carbon Hot-Spots\u2019 And Quantification Of Ghg Intensities In The Biodiesel Supply Chain Using Hybrid Lca And Structural Path Analysis", "description": "It is expected that biodiesel production in the EU will remain the dominant contributor as part of a 10% minimum binding target for biofuel in transportation fuel by 2020 within the 20% renewable energy target in the overall EU energy mix. Life cycle assessments (LCA) of biodiesel to evaluate its environmental impacts have, however, remained questionable, mainly because of the adoption of a traditional process analysis approach resulting in system boundary truncation and because of issues regarding the impacts of land use change and N(2)O emissions from fertilizer application. In this study, a hybrid LCA methodology is used to evaluate the life cycle CO(2) equivalent emissions of rape methyl ester (RME) biodiesel. The methodology uses input-output analysis to estimate upstream indirect emissions in order to complement traditional process LCA in a hybrid framework. It was estimated that traditional LCA accounted for 2.7 kg CO(2)-eq per kg of RME or 36.6% of total life cycle emissions of the RME supply chin. Further to the inclusion of upstream indirect impacts in the LCA system (which accounted for 23% of the total life cycle emissions), emissions due to direct land use change (6%) and indirect land use change (16.5%) and N(2)O emissions from fertilizer applications (17.9%) were also calculated. Structural path analysis is used to decompose upstream indirect emissions paths of the biodiesel supply chain in order to identify, quantify, and rank high carbon emissions paths or 'hot-spots' in the biodiesel supply chain. It was shown, for instance, that inputs from the 'Other Chemical Products' sector (identified as phosphoric acid, H(3)PO(4)) into the biodiesel production process represented the highest carbon emission path (or hot-spot) with 5.35% of total upstream indirect emissions of the RME biodiesel supply chain.", "keywords": ["Air Pollutants", "Conservation of Natural Resources", "Nitrogen Dioxide", "02 engineering and technology", "Carbon Dioxide", "15. Life on land", "7. Clean energy", "12. Responsible consumption", "Models", " Structural", "13. Climate action", "Biofuels", "11. Sustainability", "0202 electrical engineering", " electronic engineering", " information engineering", "European Union", "Carbon Footprint", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.1021/es103410q"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20%26amp%3B%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1021/es103410q", "name": "item", "description": "10.1021/es103410q", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1021/es103410q"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-02-14T00:00:00Z"}}, {"id": "10.1186/s40793-023-00479-9", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:20:08Z", "type": "Journal Article", "created": "2023-03-30", "title": "Abundance, classification and genetic potential of Thaumarchaeota in metagenomes of European agricultural soils: a meta-analysis", "description": "Abstract Background

For a sustainable production of food, research on agricultural soil microbial communities is inevitable. Due to its immense complexity, soil is still some kind of black box. Soil study designs for identifying microbiome members of relevance have various scopes and focus on particular environmental factors. To identify common features of soil microbiomes, data from multiple studies should be compiled and processed. Taxonomic compositions and functional capabilities of microbial communities associated with soils and plants have been identified and characterized in the past few decades. From a fertile Loess\uffe2\uff80\uff93Chernozem-type soil located in Germany, metagenomically assembled genomes (MAGs) classified as members of the phylum Thaumarchaeota/Thermoproteota were obtained. These possibly represent keystone agricultural soil community members encoding functions of relevance for soil fertility and plant health. Their importance for the analyzed microbiomes is corroborated by the fact that they were predicted to contribute to the cycling of nitrogen, feature the genetic potential to fix carbon dioxide and possess genes with predicted functions in plant-growth-promotion (PGP). To expand the knowledge on soil community members belonging to the phylum Thaumarchaeota, we conducted a meta-analysis integrating primary studies on European agricultural soil microbiomes.

Results

Taxonomic classification of the selected soil metagenomes revealed the shared agricultural soil core microbiome of European soils from 19 locations. Metadata reporting was heterogeneous between the different studies. According to the available metadata, we separated the data into 68 treatments. The phylum Thaumarchaeota is part of the core microbiome and represents a major constituent of the archaeal subcommunities in all European agricultural soils. At a higher taxonomic resolution, 2074 genera constituted the core microbiome. We observed that viral genera strongly contribute to variation in taxonomic profiles. By binning of metagenomically assembled contigs, Thaumarchaeota MAGs could be recovered from several European soil metagenomes. Notably, many of them were classified as members of the family Nitrososphaeraceae, highlighting the importance of this family for agricultural soils. The specific Loess-Chernozem Thaumarchaeota MAGs were most abundant in their original soil, but also seem to be of importance in other agricultural soil microbial communities. Metabolic reconstruction of Switzerland_1_MAG_2 revealed its genetic potential i.a. regarding carbon dioxide (CO$$_2$$ 2 ) fixation, ammonia oxidation, exopolysaccharide production and a beneficial effect on plant growth. Similar genetic features were also present in other reconstructed MAGs. Three Nitrososphaeraceae MAGs are all most likely members of a so far unknown genus.

Conclusions

On a broad view, European agricultural soil microbiomes are similarly structured. Differences in community structure were observable, although analysis was complicated by heterogeneity in metadata recording. Our study highlights the need for standardized metadata reporting and the benefits of networking open data. Future soil sequencing studies should also consider high sequencing depths in order to enable reconstruction of genome bins. Intriguingly, the family Nitrososphaeraceae commonly seems to be of importance in agricultural microbiomes.

", "keywords": ["2. Zero hunger", "570", "Soil microbial diversity", "Metagenomically assembled genomes", "Research", "European soil", "Open metagenome data analysis", "15. Life on land", "Microbiology", "Thaumarchaeota", "QR1-502", "Environmental sciences", "Agricultural microbiome", "Soil health", "GE1-350"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1186/s40793-023-00479-9.pdf"}, {"href": "https://doi.org/10.1186/s40793-023-00479-9"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Microbiome", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1186/s40793-023-00479-9", "name": "item", "description": "10.1186/s40793-023-00479-9", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1186/s40793-023-00479-9"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-03-30T00:00:00Z"}}, {"id": "10.1038/ngeo844", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:18:17Z", "type": "Journal Article", "created": "2010-04-25", "title": "Reduction of forest soil respiration in response to nitrogen deposition", "description": "The use of fossil fuels and fertilizers has increased the amount of biologically reactive nitrogen in the atmosphere over the past century. As a consequence, forests in industrialized regions have experienced greater rates of nitrogen deposition in recent decades. This unintended fertilization has stimulated forest growth, but has also affected soil microbial activity, and thus the recycling of soil carbon and nutrients. A meta-analysis suggests that nitrogen deposition impedes organic matter decomposition, and thus stimulates carbon sequestration, in temperate forest soils where nitrogen is not limiting microbial growth. The concomitant reduction in soil carbon emissions is substantial, and equivalent in magnitude to the amount of carbon taken up by trees owing to nitrogen fertilization. As atmospheric nitrogen levels continue to rise, increased nitrogen deposition could spread to older, more weathered soils, as found in the tropics; however, soil carbon cycling in tropical forests cannot yet be assessed", "keywords": ["[SDE] Environmental Sciences", "2. Zero hunger", "570", "EUROPEAN FORESTS", "NORTHERN HARDWOOD FORESTS", "ORGANIC-MATTER DECOMPOSITION", "MICROBIAL BIOMASS", "04 agricultural and veterinary sciences", "15. Life on land", "LITTER DECOMPOSITION", "BOREAL FOREST", "TEMPERATE FOREST", "Soils Nitrogen content", "CARBON SEQUESTRATION", "13. Climate action", "[SDE]Environmental Sciences", "SDG 13 - Climate Action", "0401 agriculture", " forestry", " and fisheries", "Soil aeration Environmental aspects", "HUMIC SUBSTANCES", "Forest ecology", "ATMOSPHERIC NITRATE DEPOSITION"]}, "links": [{"href": "https://doi.org/10.1038/ngeo844"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Geoscience", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/ngeo844", "name": "item", "description": "10.1038/ngeo844", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/ngeo844"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-04-25T00:00:00Z"}}, {"id": "10.1038/s41467-022-29161-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:18:19Z", "type": "Journal Article", "created": "2022-03-17", "title": "Structure and function of the soil microbiome underlying N2O emissions from global wetlands", "description": "Abstract

Wetland soils are the greatest source of nitrous oxide (N2O), a critical greenhouse gas and ozone depleter released by microbes. Yet, microbial players and processes underlying the N2O emissions from wetland soils are poorly understood. Using in situ N2O measurements and by determining the structure and potential functional of microbial communities in 645 wetland soil samples globally, we examined the potential role of archaea, bacteria, and fungi in nitrogen (N) cycling and N2O emissions. We show that N2O emissions are higher in drained and warm wetland soils, and are correlated with functional diversity of microbes. We further provide evidence that despite their much lower abundance compared to bacteria, nitrifying archaeal abundance is a key factor explaining N2O emissions from wetland soils globally. Our data suggest that ongoing global warming and intensifying environmental change may boost archaeal nitrifiers, collectively transforming wetland soils to a greater source of N2O.An anoxic sulfur-oxidizing moving bed biofilm reactor (MBBR) treating sulfur and nitrate-contaminated synthetic wastewater was monitored for 306 days under feed nitrogen-to-sulfur (N/S) molar ratios of 0.5, 0.3 and 0.1.

", "keywords": ["Aurora Universities Network", "570", "Horizon 2020", "EC", "Environmental Engineering", "218 Environmental engineering", "116 Chemical sciences", "H2020", "116", "6. Clean water", "218", "European Joint Doctorates", "11. Sustainability", "European Commission", "Knowmad Institut", "Netherlands", "Water Science and Technology"]}, "links": [{"href": "http://pubs.rsc.org/en/content/articlepdf/2019/EW/C9EW00220K"}, {"href": "https://doi.org/10.1039/c9ew00220k"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%3A%20Water%20Research%20%26amp%3B%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1039/c9ew00220k", "name": "item", "description": "10.1039/c9ew00220k", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1039/c9ew00220k"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-01-01T00:00:00Z"}}, {"id": "10.1163/18760104-20020007", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:20:04Z", "type": "Journal Article", "created": "2023-06-30", "title": "Nature-Based Solution to Man-Made Problems: Fostering the Uptake of Phytoremediation and Low-iluc Biofuels in the EU", "description": "Abstract

Soil contamination represents a major global environmental threat. Only in the European Union, around 340.000 contaminated sites are inventoried. At the same time, the need to foster the uptake of sustainable biofuels to curb greenhouse gas emissions from the transport sector is one of the pillars of the EU\uffe2\uff80\uff99s climate action to achieve the overarching goals set under the European Climate Law and the Renewable Energy Directive. Against this backdrop, nature-based solutions for soil remediation are increasingly being advocated as sustainable options to enhance soil biodiversity while addressing soil contamination in line with the UN Sustainable Development Goals and, in the EU, the European Green Deal and the EU Biodiversity Strategy for 2030. Among several nature-based soil remediation techniques, phytoremediation consists of the use of plants and their associated microbes to stabilise, degrade, volatilise and extract soil pollutants. Furthermore, the non-food biomass generated as a result of phytoremediation could provide a meaningful low Indirect Land Use Change (iluc) feedstock for the production of advanced biofuels to reduce climate change.

This paper addresses the policy and legal background surrounding the uptake of phytoremediation and recovery of output materials focusing on existing roadblocks currently hampering the full-scale adoption of such a complex yet inherently circular value chain. The paper concludes that meaningful steps must yet be taken to properly embed nature-based soil remediation techniques, such as phytoremediation, in the current legal framework and to ensure social ownership of the same to maximise its environmental benefits.Meeting end\uffe2\uff80\uff90of\uffe2\uff80\uff90century global warming targets requires aggressive action on multiple fronts. Recent reports note the futility of addressing mitigation goals without fully engaging the agricultural sector, yet no available assessments combine both nature\uffe2\uff80\uff90based solutions (reforestation, grassland and wetland protection, and agricultural practice change) and cellulosic bioenergy for a single geographic region. Collectively, these solutions might offer a suite of climate, biodiversity, and other benefits greater than either alone. Nature\uffe2\uff80\uff90based solutions are largely constrained by the duration of carbon accrual in soils and forest biomass; each of these carbon pools will eventually saturate. Bioenergy solutions can last indefinitely but carry significant environmental risk if carelessly deployed. We detail a simplified scenario for the United States that illustrates the benefits of combining approaches. We assign a portion of non\uffe2\uff80\uff90forested former cropland to bioenergy sufficient to meet projected mid\uffe2\uff80\uff90century transportation needs, with the remainder assigned to nature\uffe2\uff80\uff90based solutions such as reforestation. Bottom\uffe2\uff80\uff90up mitigation potentials for the aggregate contributions of crop, grazing, forest, and bioenergy lands are assessed by including in a Monte Carlo model conservative ranges for cost\uffe2\uff80\uff90effective local mitigation capacities, together with ranges for (a) areal extents that avoid double counting and include realistic adoption rates and (b) the projected duration of different carbon sinks. The projected duration illustrates the net effect of eventually saturating soil carbon pools in the case of most strategies, and additionally saturating biomass carbon pools in the case of forest management. Results show a conservative end\uffe2\uff80\uff90of\uffe2\uff80\uff90century mitigation capacity of 110 (57\uffe2\uff80\uff93178) Gt CO2e for the U.S., ~50% higher than existing estimates that prioritize nature\uffe2\uff80\uff90based or bioenergy solutions separately. Further research is needed to shrink uncertainties, but there is sufficient confidence in the general magnitude and direction of a combined approach to plan for deployment now.

The parameters in Richards' equation are usually calculated from experimentally measured values of the soil\u2013water characteristic curve and saturated hydraulic conductivity. The complex pore structures that often occur in porous media complicate such parametrization due to hysteresis between wetting and drying and the effects of tortuosity. Rather than estimate the parameters in Richards' equation from these indirect measurements, image-based modelling is used to investigate the relationship between the pore structure and the parameters. A three-dimensional, X-ray computed tomography image stack of a soil sample with voxel resolution of 6\u2009\u03bcm has been used to create a computational mesh. The Cahn\u2013Hilliard\u2013Stokes equations for two-fluid flow, in this case water and air, were applied to this mesh and solved using the finite-element method in COMSOL Multiphysics. The upscaled parameters in Richards' equation are then obtained via homogenization. The effect on the soil\u2013water retention curve due to three different contact angles, 0\u00b0, 20\u00b0 and 60\u00b0, was also investigated. The results show that the pore structure affects the properties of the flow on the large scale, and different contact angles can change the parameters for Richards' equation.

", "keywords": ["0301 basic medicine", "Richards\u2019 equation", "330", "EP/M020355/1", "QH301 Biology", "530", "QH301", "03 medical and health sciences", "porous media", "646809DIMR", "Journal Article", "BB/L025620/1", "BB/J00868/1", "NE/L00237/1", "Research Articles", "0303 health sciences", "Civil_env_eng", "Natural Environment Research Council (NERC)", "621", "6. Clean water", "004", "620", "3. Good health", "image-based modelling", "Richards' equation", "Engineering and Physical Sciences Research Council (EPSRC)", "Biotechnology and Biological Sciences Research Council (BBSRC)", "BB/P004180/1", "BB/L025825/1", "European Research Council"]}, "links": [{"href": "https://repository.uwl.ac.uk/id/eprint/4979/1/20170178.full.pdf"}, {"href": "https://eprints.soton.ac.uk/415076/1/ImageBasedRichardsPRST.pdf"}, {"href": "https://eprints.soton.ac.uk/415076/2/SupplementaryFigure.pdf"}, {"href": "https://royalsocietypublishing.org/doi/pdf/10.1098/rspa.2017.0178"}, {"href": "https://doi.org/10.1098/rspa.2017.0178"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20Royal%20Society%20A%3A%20Mathematical%2C%20Physical%20and%20Engineering%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1098/rspa.2017.0178", "name": "item", "description": "10.1098/rspa.2017.0178", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1098/rspa.2017.0178"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-11-01T00:00:00Z"}}, {"id": "10.1098/rstb.2020.0169", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:07Z", "type": "Journal Article", "created": "2021-08-08", "title": "The role of soils in delivering Nature's Contributions to People", "description": "

This theme issue provides an assessment of the contribution of soils to Nature's Contributions to People (NCP). The papers in this issue show that soils can contribute positively to the delivery of all NCP. These contributions can be maximized through careful soil management to provide healthy soils, but poorly managed, degraded or polluted soils may contribute negatively to the delivery of NCP. Soils are also shown to contribute positively to the UN Sustainable Development Goals. Papers in the theme issue emphasize the need for careful soil management. Priorities for soil management must include: (i) for healthy soils in natural ecosystems, protect them from conversion and degradation, (ii) for managed soils, manage in a way to protect and enhance soil biodiversity, health, productivity and sustainability and to prevent degradation, and (iii) for degraded soils, restore to full soil health. Our knowledge of what constitutes sustainable soil management is mature enough to implement best management practices, in order to maintain and improve soil health. The papers in this issue show the vast potential of soils to contribute to NCP. This is not only desirable, but essential to sustain a healthy planet and if we are to deliver sustainable development in the decades to come.

This article is part of the theme issue \uffe2\uff80\uff98The role of soils in delivering Nature\uffe2\uff80\uff99s Contributions to People\uffe2\uff80\uff99.This special issue provides an assessment of the contribution of soils to Nature's Contributions to People (NCP). Here, we combine this assessment and previously published relationships between NCP and delivery on the UN Sustainable Development Goals (SDGs) to infer contributions of soils to the SDGs. We show that in addition to contributing positively to the delivery of all NCP, soils also have a role in underpinning all SDGs. While highlighting the great potential of soils to contribute to sustainable development, it is recognized that poorly managed, degraded or polluted soils may contribute negatively to both NCP and SDGs. The positive contribution, however, cannot be taken for granted, and soils must be managed carefully to keep them healthy and capable of playing this vital role. A priority for soil management must include: (i) for healthy soils in natural ecosystems,protectthem from conversion and degradation; (ii) for managed soils,managein a way to protect and enhance soil biodiversity, health and sustainability and to prevent degradation; and (iii) for degraded soils, restore to full soil health. We have enough knowledge now to move forward with the implementation of best management practices to maintain and improve soil health. This analysis shows that this is not just desirable, it is essential if we are to meet the SDG targets by 2030 and achieve sustainable development more broadly in the decades to come.

This article is part of the theme issue \uffe2\uff80\uff98The role of soils in delivering Nature's Contributions to People\uffe2\uff80\uff99.Environmental factors relating to soil pH are widely known to be important in structuring soil bacterial communities, yet the relationship between taxonomic community composition and functional diversity remains to be determined. Here, we analyze geographically distributed soils spanning a wide pH gradient and assess the functional gene capacity within those communities using whole genome metagenomics. Low pH soils consistently had fewer taxa (lower alpha and gamma diversity), but only marginal reductions in functional alpha diversity and equivalent functional gamma diversity. However, coherent changes in the relative abundances of annotated genes between pH classes were identified; with functional profiles clustering according to pH independent of geography. Differences in gene abundances were found to reflect survival and nutrient acquisition strategies, with organic-rich acidic soils harboring a greater abundance of cation efflux pumps, C and N direct fixation systems and fermentation pathways indicative of anaerobiosis. Conversely, high pH soils possessed more direct transporter-mediated mechanisms for organic C and N substrate acquisition. These findings show that bacterial functional versatility may not be constrained by taxonomy, and we further identify the range of physiological adaptations required to exist in soils of varying nutrient availability and edaphic conditions.The food industry faces numerous challenges to assure provision of tasty and convenient food that possesses extended shelf life and shows long\uffe2\uff80\uff90term high\uffe2\uff80\uff90quality preservation. Research and development of antimicrobial materials for food applications have provided active antibacterial packaging technologies that are able to meet these challenges. Furthermore, consumers expect and demand sustainable packaging materials that would reduce environmental problems associated with plastic waste. In this review, we discuss antimicrobial composite materials for active food packaging applications that combine highly efficient antibacterial nanoparticles (i.e., metal, metal oxide, mesoporous silica and graphene\uffe2\uff80\uff90based nanomaterials) with biodegradable and environmentally friendly green polymers (i.e., gelatin, alginate, cellulose, and chitosan) obtained from plants, bacteria, and animals. In addition, innovative syntheses and processing techniques used to obtain active and safe packaging are showcased. Implementation of such green active packaging can significantly reduce the risk of foodborne pathogen outbreaks, improve food safety and quality, and minimize product losses, while reducing waste and maintaining sustainability.Biochar amendment is one of the most promising agricultural approaches to tackle climate change by enhancing soil carbon (C) sequestration. Microbial\uffe2\uff80\uff90mediated decomposition processes are fundamental for the fate and persistence of sequestered C in soil, but the underlying mechanisms are uncertain. Here, we synthesise 923 observations regarding the effects of biochar addition (over periods ranging from several weeks to several years) on soil C\uffe2\uff80\uff90degrading enzyme activities from 130 articles across five continents worldwide. Our results showed that biochar addition increased soil ligninase activity targeting complex phenolic macromolecules by 7.1%, but suppressed cellulase activity degrading simpler polysaccharides by 8.3%. These shifts in enzyme activities explained the most variation of changes in soil C sequestration across a wide range of climatic, edaphic and experimental conditions, with biochar\uffe2\uff80\uff90induced shift in ligninase:cellulase ratio correlating negatively with soil C sequestration. Specifically, short\uffe2\uff80\uff90term (<1\uffc2\uffa0year) biochar addition significantly reduced cellulase activity by 4.6% and enhanced soil organic C sequestration by 87.5%, whereas no significant responses were observed for ligninase activity and ligninase:cellulase ratio. However, long\uffe2\uff80\uff90term (\uffe2\uff89\uffa51\uffc2\uffa0year) biochar addition significantly enhanced ligninase activity by 5.2% and ligninase:cellulase ratio by 36.1%, leading to a smaller increase in soil organic C sequestration (25.1%). These results suggest that shifts in enzyme activities increased ligninase:cellulase ratio with time after biochar addition, limiting long\uffe2\uff80\uff90term soil C sequestration with biochar addition. Our work provides novel evidence to explain the diminished soil C sequestration with long\uffe2\uff80\uff90term biochar addition and suggests that earlier studies may have overestimated soil C sequestration with biochar addition by failing to consider the physiological acclimation of soil microorganisms over time.We hypothesized that plant exudates could either gel or disperse soil depending on their chemical characteristics. Barley (Hordeum vulgare L. cv. Optic) and maize (Zea mays L. cv. Freya) root exudates were collected using an aerated hydroponic method and compared with chia (Salvia hispanica L.) seed exudate, a commonly used root exudate analogue. Sandy loam soil was passed through a 500\uffe2\uff80\uff90\uffce\uffbcm mesh and treated with each exudate at a concentration of 4.6 mg exudate g\uffe2\uff88\uff921 dry soil. Two sets of soil samples were prepared. One set of treated soil samples was maintained at 4\uffc2\uffb0C to suppress microbial processes. To characterize the effect of decomposition, the second set of samples was incubated at 16\uffc2\uffb0C for 2 weeks at \uffe2\uff88\uff9230 kPa matric potential. Gas chromatography\uffe2\uff80\uff93mass spectrometry (GC\uffe2\uff80\uff93MS) analysis of the exudates showed that barley had the largest organic acid content and chia the largest content of sugars (polysaccharide\uffe2\uff80\uff90derived or free), and maize was in between barley and chia. Yield stress of amended soil samples was measured by an oscillatory strain sweep test with a cone plate rheometer. When microbial decomposition was suppressed at 4\uffc2\uffb0C, yield stress increased 20\uffe2\uff80\uff90fold for chia seed exudate and twofold for maize root exudate compared with the control, whereas for barley root exudate decreased to half. The yield stress after 2 weeks of incubation compared with soil with suppressed microbial decomposition increased by 85% for barley root exudate, but for chia and maize it decreased by 87 and 54%, respectively. Barley root exudation might therefore disperse soil and this could facilitate nutrient release. The maize root and chia seed exudates gelled soil, which could create a more stable soil structure around roots or seeds.

Highlights

Rheological measurements quantified physical behaviour of plant exudates and effect on soil stabilization.

Barley root exudates dispersed soil, which could release nutrients and carbon.

Maize root and chia seed exudates had a stabilizing effect on soil.

Physical engineering of soil in contact with plant roots depends on the nature and origin of exudates.

", "keywords": ["construction", "0301 basic medicine", "EP/M020355/1", "seed exudate", "QH301 Biology", "610", "root exudate", "630", "QH301", "03 medical and health sciences", "DIMR 646809", "microbial decompisition", "Physical Processes and Function", "NE/L00237/1", "2. Zero hunger", "soil gelling", "BB/J000868/1", "Civil_env_eng", "Natural Environment Research Council (NERC)", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water", "yield stress", "BB/J011460/1", "BB/L026058/1", "Engineering and Physical Sciences Research Council (EPSRC)", "soil dispersion", "viscosity", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "microbial decomposition", "yeild stress", "European Research Council"]}, "links": [{"href": "https://repository.uwl.ac.uk/id/eprint/4980/1/Naveed_et_al-2017-European_Journal_of_Soil_Science.pdf"}, {"href": "https://eprints.soton.ac.uk/414238/1/EJSS_submitted_Manuscript.pdf"}, {"href": "http://onlinelibrary.wiley.com/wol1/doi/10.1111/ejss.12487/fullpdf"}, {"href": "https://doi.org/10.1111/ejss.12487"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/European%20Journal%20of%20Soil%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/ejss.12487", "name": "item", "description": "10.1111/ejss.12487", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/ejss.12487"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-10-27T00:00:00Z"}}, {"id": "10.1111/ejss.13039", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:20Z", "type": "Journal Article", "created": "2021-07-02", "title": "Spatial evaluation and trade\u2010off analysis of soil functions through Bayesian networks", "description": "Abstract

There is increasing recognition that soils fulfil many functions for society. Each soil can deliver a range of functions, but some soils are more effective at some functions than others due to their intrinsic properties. In this study we mapped four different soil functions on agricultural lands across the European Union. For each soil function, indicators were developed to evaluate their performance. To calculate the indicators and assess the interdependencies between the soil functions, data from continental long\uffe2\uff80\uff90term simulation with the DayCent model were used to build crop\uffe2\uff80\uff90specific Bayesian networks. These Bayesian Networks were then used to calculate the soil functions' performance and trade\uffe2\uff80\uff90offs between the soil functions under current conditions. For each soil function the maximum potential was estimated across the European Union and changes in trade\uffe2\uff80\uff90offs were assessed. By deriving current and potential soil function delivery from Bayesian networks a better understanding is gained of how different soil functions and their interdependencies can differ depending on soil, climate and management.

Highlights

When increasing a soil function, how do trade\uffe2\uff80\uff90offs affect the other functions under different conditions?

Bayesian networks evaluate trade\uffe2\uff80\uff90offs between soil functions and estimate their maximal delivery.

Maximizing a soil function has varied effects on other functions depending on soil, climate and management.

Differences in trade\uffe2\uff80\uff90offs make some locations more suitable for increasing a soil function then others.

The importance of soils to society has gained increasing recognition over the past decade, with the potential to contribute to most of the United Nations\uffe2\uff80\uff99 Sustainable Development Goals (SDGs). With unprecedented and growing demands for food, water and energy, there is an urgent need for a global effort to address the challenges of climate change and land degradation, whilst protecting soil as a natural resource. In this paper, we identify the contribution of soil science over the past decade to addressing gaps in our knowledge regarding major environmental challenges: climate change, food security, water security, urban development, and ecosystem functioning and biodiversity. Continuing to address knowledge gaps in soil science is essential for the achievement of the SDGs. However, with limited time and budget, it is also pertinent to identify effective methods of working that ensure the research carried out leads to real\uffe2\uff80\uff90world impact. Here, we suggest three strategies for the next decade of soil science, comprising a greater implementation of research into policy, interdisciplinary partnerships to evaluate function trade\uffe2\uff80\uff90offs and synergies between soils and other environmental domains, and integrating monitoring and modelling methods to ensure soil\uffe2\uff80\uff90based policies can withstand the uncertainties of the future.

Highlights

We highlight the contributions of soil science to five major environmental challenges since 2010.

Researchers have contributed to recommendation reports, but work is rarely translated into policy.

Interdisciplinary work should assess trade\uffe2\uff80\uff90offs and synergies between soils and other domains.

Integrating monitoring and modelling is key for robust and sustainable soils\uffe2\uff80\uff90based policymaking.

Soils store vast amounts of carbon (C) on land, and increasing soil organic carbon (SOC) stocks in already managed soils such as croplands may be one way to remove C from the atmosphere, thereby limiting subsequent warming. The main objective of this study was to estimate the amount of additional C input needed to annually increase SOC stocks by 4\uffe2\uff80\uffb0 at 16 long\uffe2\uff80\uff90term agricultural experiments in Europe, including exogenous organic matter (EOM) additions. We used an ensemble of six SOC models and ran them under two configurations: (1) with default parametrization and (2) with parameters calibrated site\uffe2\uff80\uff90by\uffe2\uff80\uff90site to fit the evolution of SOC stocks in the control treatments (without EOM). We compared model simulations and analysed the factors generating variability across models. The calibrated ensemble was able to reproduce the SOC stock evolution in the unfertilised control treatments. We found that, on average, the experimental sites needed an additional 1.5 \uffc2\uffb1\uffe2\uff80\uff891.2\uffc2\uffa0Mg C ha\uffe2\uff88\uff921\uffc2\uffa0year\uffe2\uff88\uff921 to increase SOC stocks by 4\uffe2\uff80\uffb0 per year over 30\uffe2\uff80\uff89years, compared to the C input in the control treatments (multi\uffe2\uff80\uff90model median \uffc2\uffb1 median standard deviation across sites). That is, a 119% increase compared to the control. While mean annual temperature, initial SOC stocks and initial C input had a significant effect on the variability of the predicted C input in the default configuration (i.e., the relative standard deviation of the predicted C input from the mean), only water\uffe2\uff80\uff90related variables (i.e., mean annual precipitation and potential evapotranspiration) explained the divergence between models when calibrated. Our work highlights the challenge of increasing SOC stocks in agriculture and accentuates the need to increasingly lean on multi\uffe2\uff80\uff90model ensembles when predicting SOC stock trends and related processes. To increase the reliability of SOC models under future climate change, we suggest model developers to better constrain the effect of water\uffe2\uff80\uff90related variables on SOC decomposition.

Highlights

The feasibility of the 4\uffe2\uff80\uffb0 target was studied at 16 long\uffe2\uff80\uff90term agricultural experiments.

An ensemble of soil organic carbon models was used to estimate the uncertainty of the predictions.

On average across the sites, carbon input had to increase by 119% compared to initial conditions.

High uncertainty of the simulations was mainly driven by water\uffe2\uff80\uff90related variables.

Soils are key components of our ecosystems and provide 95%\uffe2\uff80\uff9399% of our food. This importance is reflected by an increase in participatory citizen science projects on soils. Citizen science is a participatory research method that actively involves and engages the public in scientific enquiry to generate new knowledge or understanding. Here, we review past and current citizen science projects on agricultural soils across Europe. We conducted a web\uffe2\uff80\uff90based survey and described 24 reviewed European citizen science projects in the light of the 10 principles of citizen science and identified success factors for citizen science. Over 66% of the projects generated soil biodiversity data; 54% and 42% of the projects generated data on vegetation cover and soil organic carbon, respectively. Our findings show that soil citizen science projects aligned with the 10 principles of citizen science offer an unexploited resource for European soil health research. We conclude that promoting co\uffe2\uff80\uff90creation, fostering knowledge\uffe2\uff80\uff90sharing networks and enabling long\uffe2\uff80\uff90term communication and commitment with citizens are success factors for further development of citizen science on soils.Simulation models represent soil organic carbon (SOC) dynamics in global carbon (C) cycle scenarios to support climate\uffe2\uff80\uff90change studies. It is imperative to increase confidence in long\uffe2\uff80\uff90term predictions of SOC dynamics by reducing the uncertainty in model estimates. We evaluated SOC simulated from an ensemble of 26 process\uffe2\uff80\uff90based C models by comparing simulations to experimental data from seven long\uffe2\uff80\uff90term bare\uffe2\uff80\uff90fallow (vegetation\uffe2\uff80\uff90free) plots at six sites: Denmark (two sites), France, Russia, Sweden and the United Kingdom. The decay of SOC in these plots has been monitored for decades since the last inputs of plant material, providing the opportunity to test decomposition without the continuous input of new organic material. The models were run independently over multi\uffe2\uff80\uff90year simulation periods (from 28 to 80\uffc2\uffa0years) in a blind test with no calibration (Bln) and with the following three calibration scenarios, each providing different levels of information and/or allowing different levels of model fitting: (a) calibrating decomposition parameters separately at each experimental site (Spe); (b) using a generic, knowledge\uffe2\uff80\uff90based, parameterization applicable in the Central European region (Gen); and (c) using a combination of both (a) and (b) strategies (Mix). We addressed uncertainties from different modelling approaches with or without spin\uffe2\uff80\uff90up initialization of SOC. Changes in the multi\uffe2\uff80\uff90model median (MMM) of SOC were used as descriptors of the ensemble performance. On average across sites, Gen proved adequate in describing changes in SOC, with MMM equal to average SOC (and standard deviation) of 39.2 (\uffc2\uffb115.5)\uffc2\uffa0Mg\uffc2\uffa0C/ha compared to the observed mean of 36.0 (\uffc2\uffb119.7)\uffc2\uffa0Mg\uffc2\uffa0C/ha (last observed year), indicating sufficiently reliable SOC estimates. Moving to Mix (37.5\uffc2\uffa0\uffc2\uffb1\uffc2\uffa016.7\uffc2\uffa0Mg\uffc2\uffa0C/ha) and Spe (36.8\uffc2\uffa0\uffc2\uffb1\uffc2\uffa019.8\uffc2\uffa0Mg\uffc2\uffa0C/ha) provided only marginal gains in accuracy, but modellers would need to apply more knowledge and a greater calibration effort than in Gen, thereby limiting the wider applicability of models.There is growing international interest in better managing soils to increase soil organic carbon (SOC) content to contribute to climate change mitigation, to enhance resilience to climate change and to underpin food security, through initiatives such as international \uffe2\uff80\uff984p1000\uffe2\uff80\uff99 initiative and the FAO's Global assessment of SOC sequestration potential (GSOCseq) programme. Since SOC content of soils cannot be easily measured, a key barrier to implementing programmes to increase SOC at large scale, is the need for credible and reliable measurement/monitoring, reporting and verification (MRV) platforms, both for national reporting and for emissions trading. Without such platforms, investments could be considered risky. In this paper, we review methods and challenges of measuring SOC change directly in soils, before examining some recent novel developments that show promise for quantifying SOC. We describe how repeat soil surveys are used to estimate changes in SOC over time, and how long\uffe2\uff80\uff90term experiments and space\uffe2\uff80\uff90for\uffe2\uff80\uff90time substitution sites can serve as sources of knowledge and can be used to test models, and as potential benchmark sites in global frameworks to estimate SOC change. We briefly consider models that can be used to simulate and project change in SOC and examine the MRV platforms for SOC change already in use in various countries/regions. In the final section, we bring together the various components described in this review, to describe a new vision for a global framework for MRV of SOC change, to support national and international initiatives seeking to effect change in the way we manage our soils.

", "keywords": ["[SDE] Environmental Sciences", "550", "BULK-DENSITY", "QH301 Biology", "Climate", "[SDV]Life Sciences [q-bio]", "NEW-ZEALAND", "630", "Soil", "NE/M021327/1", "11. Sustainability", "SDG 13 - Climate Action", "AGRICULTURAL SOILS", "SDG 15 - Life on Land", "General Environmental Science", "agriculture", "2. Zero hunger", "Global and Planetary Change", "reporting", "Measurement", "Ecology", "IN-SITU", "Agricultura", "NE/P019455/1", "carbono org\u00e1nico del suelo", "Agriculture", "LAND-USE CHANGE", "04 agricultural and veterinary sciences", "[SDV] Life Sciences [q-bio]", "climate change", "Sustainability", "[SDE]Environmental Sciences", "Carbon Sequestration", "DIFFUSE-REFLECTANCE SPECTROSCOPY", "LONG-TERM EXPERIMENTS", "330", "Monitoring", "STOCK CHANGES", "MRV", "secuestro de carbon", "12. Responsible consumption", "QH301", "Greenhouse Gases", "ORGANIC-CARBON", "soil organic matter", "greenhouse gases", "Invited Research Reviews", "Environmental Chemistry", "774378", "SDG 2 - Zero Hunger", "European Commission", "resilience", "Climate Solutions", "Soil organic matter", "Soil organic carbon", "Natural Environment Research Council (NERC)", "Verification", "food security", "15. Life on land", "carbon sequestration", "Sustainable Agriculture", "Carbon", "EDDY-COVARIANCE", "soil organic carbon", "monitoring", "Reporting", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "measurement", "verification"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/gcb.14815"}, {"href": "https://scholarworks.uvm.edu/context/rsfac/article/1079/viewcontent/Lini2019b.pdf"}, {"href": "https://doi.org/10.1111/gcb.14815"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.14815", "name": "item", "description": "10.1111/gcb.14815", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.14815"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-10-06T00:00:00Z"}}, {"id": "10.1111/gcb.14878", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:24Z", "type": "Journal Article", "created": "2019-10-22", "title": "Which practices co\u2010deliver food security, climate change mitigation and adaptation, and combat land degradation and desertification?", "description": "Abstract

There is a clear need for transformative change in the land management and food production sectors to address the global land challenges of climate change mitigation, climate change adaptation, combatting land degradation and desertification, and delivering food security (referred to hereafter as \uffe2\uff80\uff9cland challenges\uffe2\uff80\uff9d). We assess the potential for 40 practices to address these land challenges and find that: Nine options deliver medium to large benefits for all four land challenges. A further two options have no global estimates for adaptation, but have medium to large benefits for all other land challenges. Five options have large mitigation potential (>3\uffc2\uffa0Gt CO2eq/year) without adverse impacts on the other land challenges. Five options have moderate mitigation potential, with no adverse impacts on the other land challenges. Sixteen practices have large adaptation potential (>25 million people benefit), without adverse side effects on other land challenges. Most practices can be applied without competing for available land. However, seven options could result in competition for land. A large number of practices do not require dedicated land, including several land management options, all value chain options, and all risk management options. Four options could greatly increase competition for land if applied at a large scale, though the impact is scale and context specific, highlighting the need for safeguards to ensure that expansion of land for mitigation does not impact natural systems and food security. A number of practices, such as increased food productivity, dietary change and reduced food loss and waste, can reduce demand for land conversion, thereby potentially freeing\uffe2\uff80\uff90up land and creating opportunities for enhanced implementation of other practices, making them important components of portfolios of practices to address the combined land challenges.