{"type": "FeatureCollection", "features": [{"id": "10.1093/femsec/fiz133", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:18:12Z", "type": "Journal Article", "created": "2019-08-22", "title": "Restriction of plant roots in boreal forest organic soils affects the microbial community but does not change the dominance from ectomycorrhizal to saprotrophic fungi", "description": "ABSTRACT                <p>Boreal forest soils store significant amounts of carbon and are cohabited by saprotrophic and ectomycorrhizal fungi (ECM). The \uffe2\uff80\uff98Gadgil effect\uffe2\uff80\uff99 implies antagonistic interactions between saprotrophic fungi and ECM. Plant photosynthates support the competitive fitness of the ECM, and may also shape the soil bacterial communities. Many \uffe2\uff80\uff98Gadgil effect\uffe2\uff80\uff99 experiments have focused on litter layer (OL) or have litter and root-fragments present, and thus possibly favor the saprotrophs. We compared how the restriction of plant roots and exudates affect soil microbial community structures in organic soil (mixed OF and OH). For this, we established a 3-yr field experiment with 3 different mesh treatments affecting the penetration of plant roots and external fungal hyphae. Exclusion of plant photosynthates induced modest changes in both fungal and bacterial community structures, but not to potential functionality of the microbial community. The microbial community was resilient towards rather short-term disturbances. Contrary to the \uffe2\uff80\uff98Gadgil effect\uffe2\uff80\uff99, mesh treatments restricting the entrance of plant roots and external fungal hyphae did not favor saprotrophs that originally inhabited the soil. Thus, we propose that different substrate preferences (fresh litter vs. fermented or humified soil), rather than antagonism, maintain the spatial separation of saprotrophs and mycorrhizal fungi in boreal forest soils.</p>", "keywords": ["0301 basic medicine", "570", "Hyphae", "577", "Plant Roots", "ectomycorrhiza", "Trees", "Soil", "03 medical and health sciences", "boreal forest soil", "Mycorrhizae", "Taiga", "saprotrophs", "Soil Microbiology", "2. Zero hunger", "0303 health sciences", "Microbiota", "Fungi", "Plants", "15. Life on land", "Gadgil effect", "Carbon", "functional gene profile", "13. Climate action", "ta1181", "microbial community"]}, "links": [{"href": "http://academic.oup.com/femsec/article-pdf/95/9/fiz133/29808832/fiz133.pdf"}, {"href": "https://doi.org/10.1093/femsec/fiz133"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/FEMS%20Microbiology%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/femsec/fiz133", "name": "item", "description": "10.1093/femsec/fiz133", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/femsec/fiz133"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-08-23T00:00:00Z"}}, {"id": "10.3389/fpls.2021.682142", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:20:37Z", "type": "Journal Article", "created": "2021-07-21", "title": "Shifts in the Abundances of Saprotrophic and Ectomycorrhizal Fungi With Altered Leaf Litter Inputs", "description": "<p>Ectomycorrhizal (EcM) and saprotrophic fungi interact in the breakdown of organic matter, but the mechanisms underlying the EcM role on organic matter decomposition are not totally clear. We hypothesized that the ecological relations between EcM and saprotroph fungi are modulated by resources availability and accessibility, determining decomposition rates. We manipulated the amount of leaf litter inputs (No-Litter, Control Litter, Doubled Litter) on Trenched (root exclusion) and Non-Trenched plots (with roots) in a temperate deciduous forest of EcM-associated trees. Resultant shifts in soil fungal communities were determined by phospholipid fatty acids and DNA sequencing after 3 years, and CO2 fluxes were measured throughout this period. Different levels of leaf litter inputs generated a gradient of organic substrate availability and accessibility, altering the composition and ecological relations between EcM and saprotroph fungal communities. EcM fungi dominated at low levels of fresh organic substrates and lower organic matter quality, where short-distances exploration types seem to be better competitors, whereas saprotrophs and longer exploration types of EcM fungi tended to dominate at high levels of leaf litter inputs, where labile organic substrates were easily accessible. We were, however, not able to detect unequivocal signs of competition between these fungal groups for common resources. These results point to the relevance of substrate quality and availability as key factors determining the role of EcM and saprotroph fungi on litter and soil organic matter decay and represent a path forward on the capacity of organic matter decomposition of different exploration types of EcM fungi.</p", "keywords": ["Plant detritus", "0301 basic medicine", "570", "litter decomposition", "Plant Science", "630", "SB1-1110", "03 medical and health sciences", "environment/Symbiosis", "[SDV.EE.ECO] Life Sciences [q-bio]/Ecology", " environment/Ecosystems", "plant detritus", "106026 Ecosystem research", "Biology", "soil fungal communities", "0303 health sciences", "Ectomycorrhiza fungal exploration types", "ectomycorrhiza fungal exploration types", "Litter decomposition", "Plant culture", "Soil fungal communities", "[SDV.EE.IEO] Life Sciences [q-bio]/Ecology", " environment/Symbiosis", "15. Life on land", "Gadgil effect", "CO2 fluxes", "106026 \u00d6kosystemforschung", "CO fluxes", "[SDV.EE.ECO]Life Sciences [q-bio]/Ecology", "[SDV.EE.IEO]Life Sciences [q-bio]/Ecology", "environment/Ecosystems"]}, "links": [{"href": "https://doi.org/10.3389/fpls.2021.682142"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fpls.2021.682142", "name": "item", "description": "10.3389/fpls.2021.682142", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fpls.2021.682142"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-07-21T00:00:00Z"}}, {"id": "10.5061/dryad.8gtht76q3", "type": "Feature", "geometry": null, "properties": {"license": "unspecified", "updated": "2026-07-26T16:21:23Z", "type": "Dataset", "title": "Mycorrhizal effects on decomposition and soil CO2 flux depend on changes in nitrogen availability during forest succession", "description": "Mycorrhizal fungi play a central role in plant nutrition and nutrient  cycling, yet our understanding on their effects on free-living microbes,  soil carbon (C) decomposition and soil CO2 fluxes remains limited. Here we  used trenches lined with mesh screens of varying sizes to isolate  mycorrhizal hyphal effects on soil C dynamics in subtropical successional  forests. We found that the presence of mycorrhizal hyphae suppressed soil  CO2 fluxes by 17% in early-successional forests, but enhanced CO2 losses  by 20% and 32% in mid- and late-successional forests, respectively. The  inhibitory effects of mycorrhizal fungi on soil CO2 fluxes in the young  stands were associated with changes in soil nitrogen (N) mineralization  and microbial activities, suggesting that competition between mycorrhizae  and saprotrophs for N likely suppressed soil C decomposition. In the mid-  and late-successional stands, mycorrhizal enhancement of CO2 release from  soil likely resulted from both hyphal respiration and mycorrhizal-induced  acceleration of organic matter decay. Synthesis. Our results highlight the  sensitivity of mycorrhizal fungi-saprotroph interactions to shifts in  nutrient availability and demand, with important consequences for soil  carbon dynamics particularly in ecosystems with low nutrient conditions.  Incorporating such interactions into models should improve the simulations  of forest biogeochemical cycles under global change.", "keywords": ["mycelial respiartion", "soil carbon stabilization", "soil nitrogen", "15. Life on land", "Gadgil effect", "enzyme activity", "mycorrhizae-saprotroph competition"]}, "links": [{"href": "https://doi.org/10.5061/dryad.8gtht76q3"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.8gtht76q3", "name": "item", "description": "10.5061/dryad.8gtht76q3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.8gtht76q3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-06T00:00:00Z"}}, {"id": "10067/1804720151162165141", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-26T16:24:31Z", "type": "Journal Article", "created": "2021-07-21", "title": "Shifts in the Abundances of Saprotrophic and Ectomycorrhizal Fungi With Altered Leaf Litter Inputs", "description": "<p>Ectomycorrhizal (EcM) and saprotrophic fungi interact in the breakdown of organic matter, but the mechanisms underlying the EcM role on organic matter decomposition are not totally clear. We hypothesized that the ecological relations between EcM and saprotroph fungi are modulated by resources availability and accessibility, determining decomposition rates. We manipulated the amount of leaf litter inputs (No-Litter, Control Litter, Doubled Litter) on Trenched (root exclusion) and Non-Trenched plots (with roots) in a temperate deciduous forest of EcM-associated trees. Resultant shifts in soil fungal communities were determined by phospholipid fatty acids and DNA sequencing after 3 years, and CO2 fluxes were measured throughout this period. Different levels of leaf litter inputs generated a gradient of organic substrate availability and accessibility, altering the composition and ecological relations between EcM and saprotroph fungal communities. EcM fungi dominated at low levels of fresh organic substrates and lower organic matter quality, where short-distances exploration types seem to be better competitors, whereas saprotrophs and longer exploration types of EcM fungi tended to dominate at high levels of leaf litter inputs, where labile organic substrates were easily accessible. We were, however, not able to detect unequivocal signs of competition between these fungal groups for common resources. These results point to the relevance of substrate quality and availability as key factors determining the role of EcM and saprotroph fungi on litter and soil organic matter decay and represent a path forward on the capacity of organic matter decomposition of different exploration types of EcM fungi.</p", "keywords": ["liti\u00e8re v\u00e9g\u00e9tale", "Plant detritus", "0301 basic medicine", "570", "Quercus petraea", "http://aims.fao.org/aos/agrovoc/c_24064", "Champignon", "http://aims.fao.org/aos/agrovoc/c_14083", "litter decomposition", "Plant Science", "630", "SB1-1110", "03 medical and health sciences", "Saprophyte", "http://aims.fao.org/aos/agrovoc/c_33550", "environment/Symbiosis", "[SDV.EE.ECO] Life Sciences [q-bio]/Ecology", " environment/Ecosystems", "plant detritus", "106026 Ecosystem research", "http://aims.fao.org/aos/agrovoc/c_3047", "Biology", "http://aims.fao.org/aos/agrovoc/c_3145", "http://aims.fao.org/aos/agrovoc/c_5023", "http://aims.fao.org/aos/agrovoc/c_35657", "http://aims.fao.org/aos/agrovoc/c_5387", "soil fungal communities", "Mycorhiz\u00e9", "0303 health sciences", "liti\u00e8re foresti\u00e8re", "Ectomycorrhiza fungal exploration types", "ectomycorrhiza fungal exploration types", "http://aims.fao.org/aos/agrovoc/c_24692", "Litter decomposition", "Plant culture", "Soil fungal communities", "[SDV.EE.IEO] Life Sciences [q-bio]/Ecology", " environment/Symbiosis", "15. 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