Several studies have reported how tillage and cropping systems affect quantity, quality, and distribution of soil organic matter (SOM) along the profile. However, the effect of soil management on the chemical structure of SOM and on its hydrophobic and hydrophilic components has been little investigated. In this work, the long\uffe2\uff80\uff90term (19\uffe2\uff80\uff89years) effects of two cropping systems (wheat monoculture and wheat/faba bean rotation) and three tillage managements (conventional, reduced, and no tillage) on some chemical characteristics of SOM and their relationships with labile carbon (C) pools were evaluated. Soil samples were taken from the topsoil (0\uffe2\uff80\uff9315\uffe2\uff80\uff89cm) of a Chromic Haploxerert (central Sicily, Italy). After 19\uffe2\uff80\uff89years of different tillage and cropping systems management, total organic C significantly differed among treatments with the labile organic C pools showing the greater amount in no till and in wheat/faba bean plots. Hydrophobic and hydrophilic components of SOM, determined by diffuse reflectance infrared Fourier transform spectroscopy, were mainly affected by cropping system, whereas aromatic components of SOM by tillage. Soil organic matter components and characteristics showed significant correlations with the soil biochemical parameters, confirming the expected synergism between chemical and biochemical properties. This study demonstrated that (i) no tillage and crop rotation improve the chemical and biochemical properties of SOM of Vertisols under semiarid environment; and (ii) tillage management and cropping systems have affected, after 19\uffe2\uff80\uff89years, more the chemical and biochemical properties of SOM than its quantity. Copyright \uffc2\uffa9 2014 John Wiley & Sons, Ltd.
", "keywords": ["2. Zero hunger", "3303 Development", "Soil Science", "04 agricultural and veterinary sciences", "15. Life on land", "Development", "6. Clean water", "2300 General Environmental Science", "10122 Institute of Geography", "13. Climate action", "2304 Environmental Chemistry", "Environmental Chemistry", "0401 agriculture", " forestry", " and fisheries", "910 Geography & travel", "1111 Soil Science", "General Environmental Science"]}, "links": [{"href": "https://doi.org/10.1002/ldr.2293"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Land%20Degradation%20%26amp%3B%20Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ldr.2293", "name": "item", "description": "10.1002/ldr.2293", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ldr.2293"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-06-11T00:00:00Z"}}, {"id": "10.1002/ldr.1055", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:14:13Z", "type": "Journal Article", "created": "2010-10-15", "title": "Long-Term Cropping Systems And Tillage Management Effects On Soil Organic Carbon Stock And Steady State Level Of C Sequestration Rates In A Semiarid Environment", "description": "AbstractA calcareous and clayey xeric Chromic Haploxerept of a long\uffe2\uff80\uff90term experimental site in Sicily (Italy) was sampled (0\uffe2\uff80\uff9315\uffe2\uff80\uff89cm depth) under different land use management and cropping systems (CSs) to study their effect on soil aggregate stability and organic carbon (SOC). The experimental site had three tillage managements (no till [NT], dual\uffe2\uff80\uff90layer [DL] and conventional tillage [CT]) and two CSs (durum wheat monocropping [W] and durum wheat/faba bean rotation [WB]). The annually sequestered SOC with W was 2\uffc2\uffb775\uffe2\uff80\uff90times higher than with WB. SOC concentrations were also higher. Both NT and CT management systems were the most effective in SOC sequestration whereas with DL system no C was sequestered. The differences in SOC concentrations between NT and CT were surprisingly small. Cumulative C input of all cropping and tillage systems and the annually sequestered SOC indicated that a steady state occurred at a sequestration rate of 7\uffc2\uffb74\uffe2\uff80\uff89Mg\uffe2\uff80\uff89C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89y\uffe2\uff88\uff921. Independent of the CSs, most of the SOC was stored in the silt and clay fraction. This fraction had a high N content which is typical for organic matter interacting with minerals. Macroaggregates (>250\uffe2\uff80\uff89\uffc2\uffb5m) and large microaggregates (75\uffe2\uff80\uff93250\uffe2\uff80\uff89\uffc2\uffb5m) were influenced by the treatments whereas the finest fractions were not. DL reduced the SOC in macroaggregates while NT and CT gave rise to higher SOC contents. In Mediterranean areas with Vertisols, agricultural strategies aimed at increasing the SOC contents should probably consider enhancing the proportion of coarser soil fractions so that, in the short\uffe2\uff80\uff90term, organic C can be accumulated. Copyright \uffc2\uffa9 2010 John Wiley & Sons, Ltd.
", "keywords": ["2300 General Environmental Science", "2. Zero hunger", "10122 Institute of Geography", "3303 Development", "2304 Environmental Chemistry", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "910 Geography & travel", "15. Life on land", "1111 Soil Science"]}, "links": [{"href": "https://doi.org/10.1002/ldr.1055"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Land%20Degradation%20%26amp%3B%20Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ldr.1055", "name": "item", "description": "10.1002/ldr.1055", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ldr.1055"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-10-14T00:00:00Z"}}, {"id": "10.1016/j.eti.2023.103229", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:16:23Z", "type": "Journal Article", "created": "2023-06-02", "title": "Modeling biochar-soil depth dependency on fecal coliform straining under subsurface drip irrigation", "description": "Funding Information: This work was supported by Shahrekord University, Iran. N. Sepehrnia is funded by a Marie Sk\u0142odowska-Curie Individual Fellowship, United Kingdom under the grant agreement No. 101026287. We acknowledge University of Aberdeen, UK for supporting this project. ; Peer reviewed", "keywords": ["GE", "Soil Science", "610", "Plant Science", "04 agricultural and veterinary sciences", "01 natural sciences", "6. Clean water", "510", "Biochar", "Maximum allowable depletion", "0401 agriculture", " forestry", " and fisheries", "Mathematical modeling", "Irrigation strategy", "HYDRUS", "Soil bacteria contamination", "GE Environmental Sciences", "General Environmental Science", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.eti.2023.103229"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Technology%20%26amp%3B%20Innovation", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.eti.2023.103229", "name": "item", "description": "10.1016/j.eti.2023.103229", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.eti.2023.103229"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-08-01T00:00:00Z"}}, {"id": "10.1016/j.jclepro.2020.121922", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:16:50Z", "type": "Journal Article", "created": "2020-05-04", "title": "The influence of nutrient management on soil organic carbon storage, crop production, and yield stability varies under different climates", "description": "Abstract Our understanding on how soil organic carbon (SOC) storage, crop yield, and yield stability are influenced by climate is limited. To critically examine this, the impact of long-term (\u226510 years) application of nutrient management practices on SOC storage, crop productivity, and yield stability were evaluated under different climatic conditions in China using a meta-analysis approach. The cropping area of China was divided into four distinct groups based on local climatic conditions (warm dry, DW; warm moist, WM; cool dry, CD; cool moist, CM). Results indicated that the impact of nutrient management practices on SOC storage, crop yield, and yield stability varies under different climatic zone in China. The use of unbalanced mineral fertilizer (UMF), and balanced mineral fertilizer (BMF) led to a loss in SOC storage by 6%, and 11% under CM climatic zone and gains in DW, WM, and CD climates. Organic fertilizers (OF), combined unbalanced mineral and organic fertilizers (UMOF), and combined balanced mineral and organic fertilizers (BMOF) were able to sustain and enhance SOC storage under all climatic conditions. However, the largest increase in SOC storage across all climates was seen for BMOF. Further, corresponding values of crop productivity and yield stability were also highest for BMOF among all the nutrient management treatments. A linear-plateau model indicated that maximal yield responsive SOC stock (Copt) levels ranged from 33.43 to 45.51\u00a0Mg\u00a0C ha\u22121 for rice (Oryza sativa), maize (Zea mays), and wheat (Triticum aestivum) production. To enhance and sustain SOC storage, and crop productivity of croplands under different climates, BMOF appears to be the most appropriate nutrient management strategy. Our findings demonstrate that it is essential to optimize nutrient management strategies according to the local climate to protect soil from SOC losses, and for achieving sustainable crop production.", "keywords": ["Yield stability", "AGRICULTURE", "550", "INCREASES", "Supplementary Data", "QH301 Biology", "Strategy and Management", "SEQUESTRATION", "CHINA", "Industrial and Manufacturing Engineering", "630", "12. Responsible consumption", "QH301", "Critical level", "SDG 13 - Climate Action", "Climate change", "SDG 7 - Affordable and Clean Energy", "Renewable Energy", "SDG 2 - Zero Hunger", "General Environmental Science", "2. Zero hunger", "Sustainability and the Environment", "Crop yields", "Soil organic carbon", "PADDY FIELDS", "Nutrient management", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water", "NITROGEN", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "STRAW", "LONG-TERM FERTILIZATION", "MATTER"]}, "links": [{"href": "https://doi.org/10.1016/j.jclepro.2020.121922"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Cleaner%20Production", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jclepro.2020.121922", "name": "item", "description": "10.1016/j.jclepro.2020.121922", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jclepro.2020.121922"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-09-01T00:00:00Z"}}, {"id": "10.1038/s43247-023-00830-5", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-13T16:18:19Z", "type": "Journal Article", "created": "2023-05-08", "title": "Soil organic carbon models need independent time-series validation for reliable prediction", "description": "AbstractNumerical models are crucial to understand and/or predict past and future soil organic carbon dynamics. For those models aiming at prediction, validation is a critical step to gain confidence in projections. With a comprehensive review of ~250 models, we assess how models are validated depending on their objectives and features, discuss how validation of predictive models can be improved. We find a critical lack of independent validation using observed time series. Conducting such validations should be a priority to improve the model reliability. Approximately 60% of the models we analysed are not designed for predictions, but rather for conceptual understanding of soil processes. These models provide important insights by identifying key processes and alternative formalisms that can be relevant for predictive models. We argue that combining independent validation based on observed time series and improved information flow between predictive and conceptual models will increase reliability in predictions.An increase in the frequency of extremely hot and dry events has been experienced over the past few decades in South America, and particularly in Brazil. Regional climate change projections indicate a future aggravation of this trend. However, a comprehensive characterization of drought and heatwave compound events, as well as of the main land\uffe2\uff80\uff93atmosphere mechanisms involved, is still lacking for most of South America. This study aims to fill this gap, assessing for the first time the historical evolution of compound summer drought and heatwave events for the heavily populated region of Southeast Brazil and for the period of 1980\uffe2\uff80\uff932018. The main goal is to undertake a detailed analysis of the surface and synoptic conditions, as well as of the land\uffe2\uff80\uff93atmosphere coupling processes that led to the occurrence of individual and compound dry and hot extremes. Our results confirm that the S\uffc3\uffa3o Paulo, Rio de Janeiro and Minas Gerais states have recorded pronounced and statistically significant increases in the number of compound summer drought and heatwave episodes. In particular, the last decade was characterized by two austral summer seasons (2013/14 and 2014/15) with outstanding concurrent drought and heatwave conditions stemmed by severe precipitation deficits and a higher-than-average occurrence of blocking patterns. As result of these land and atmosphere conditions, a high coupling (water-limited) regime was imposed, promoting the re-amplification of hot spells that resulted in mega heatwave episodes. Our findings reveal a substantial contribution of persistent dry conditions to heatwave episodes, highlighting the vulnerability of the region to climate change.
", "keywords": ["heatwaves", "Sustainability and the Environment", "droughts", "Science", "Physics", "QC1-999", "Environmental and Occupational Health", "Q", "15. Life on land", "Environmental technology. Sanitary engineering", "01 natural sciences", "6. Clean water", "Southeast Brazil", "Environmental sciences", "13. Climate action", "Earth and Environmental Sciences", "compound events", "GE1-350", "Renewable Energy", "Public Health", "TD1-1066", "General Environmental Science", "climate extremes", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1088/1748-9326/abe0eb"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Research%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1088/1748-9326/abe0eb", "name": "item", "description": "10.1088/1748-9326/abe0eb", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1088/1748-9326/abe0eb"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-02-25T00:00:00Z"}}, {"id": "10.1088/1748-9326/ab9a6d", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:18:54Z", "type": "Journal Article", "created": "2020-06-08", "title": "The next generation of climate model should account for the evolution of mineral-organic interactions with permafrost thaw", "description": "The Earth\u2019s high latitude regions are warming twice as fast as the global average which enhances the thawing of permafrost, i.e. the perennially frozen ground which underlies about 25% of the exposed land surface in the Northern Hemisphere (Brown et al 1998). Permafrost thaw exposes previously frozen organic carbon (OC) to microbial decomposition with subsequent emission of the greenhouse gases carbon dioxide (CO2) and methane (CH4) into the atmosphere, creating positive feedback on global warming, i.e. the permafrost carbon feedback (Schuur et al 2015). Permafrost contains 1460\u20131600 GtC, almost twice the C in the atmosphere (IPCC 2019), and 15 \u00b1 3% of that OC stock could be emitted as greenhouse gases by 2100 (Schuur et al 2015). On an annual basis, this would represent 22%\u201331% of the current anthropogenic C emissions (considering anthropogenic C emissions from IPCC 2019). Most of that C would be emitted as CO2 but it is estimated that 2.3% of the permafrost C emissions will be released as CH4 (Schuur et al 2015). This has implications for the Earth\u2019s radiative balance, given the larger global warming potential of CH4 at the century time scale. Therefore, evidence is mounting that permafrost thaw represents a tipping element in the Earth climate system (Lenton et al 2019). Yet uncertainties are associated with how this will unfold.", "keywords": ["organic", "Science", "QC1-999", "Environmental technology. Sanitary engineering", "01 natural sciences", "7. Clean energy", "arctic", "GE1-350", "Renewable Energy", "TD1-1066", "General Environmental Science", "0105 earth and related environmental sciences", "Sustainability and the Environment", "carbon", "organic carbon", "Physics", "Environmental and Occupational Health", "Q", "minerals", "15. Life on land", "artic", "Environmental sciences", "13. Climate action", "Public Health", "thaw", "carbon emissions", "permafrost"], "contacts": [{"organization": "Sophie Opfergelt", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1088/1748-9326/ab9a6d"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Research%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1088/1748-9326/ab9a6d", "name": "item", "description": "10.1088/1748-9326/ab9a6d", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1088/1748-9326/ab9a6d"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-08-21T00:00:00Z"}}, {"id": "10.1111/gcb.14644", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:19:22Z", "type": "Journal Article", "created": "2019-04-07", "title": "A critical review of the impacts of cover crops on nitrogen leaching, net greenhouse gas balance and crop productivity", "description": "AbstractCover crops play an increasingly important role in improving soil quality, reducing agricultural inputs and improving environmental sustainability. The main objectives of this critical global review and systematic analysis were to assess cover crop practices in the context of their impacts on nitrogen leaching, net greenhouse gas balances (NGHGB) and crop productivity. Only studies that investigated the impacts of cover crops and measured one or a combination of nitrogen leaching, soil organic carbon (SOC), nitrous oxide (N2O), grain yield and nitrogen in grain of primary crop, and had a control treatment were included in the analysis. Long\uffe2\uff80\uff90term studies were uncommon, with most data coming from studies lasting 2\uffe2\uff80\uff933\uffc2\uffa0years. The literature search resulted in 106 studies carried out at 372 sites and covering different countries, climatic zones and management. Our analysis demonstrates that cover crops significantly (p\uffc2\uffa0<\uffc2\uffa00.001) decreased N leaching and significantly (p\uffc2\uffa0<\uffc2\uffa00.001) increased SOC sequestration without having significant (p\uffc2\uffa0>\uffc2\uffa00.05) effects on direct N2O emissions. Cover crops could mitigate the NGHGB by 2.06\uffc2\uffa0\uffc2\uffb1\uffc2\uffa02.10\uffc2\uffa0Mg CO2\uffe2\uff80\uff90eq\uffc2\uffa0ha\uffe2\uff88\uff921\uffc2\uffa0year\uffe2\uff88\uff921. One of the potential disadvantages of cover crops identified was the reduction in grain yield of the primary crop by \uffe2\uff89\uff884%, compared to the control treatment. This drawback could be avoided by selecting mixed cover crops with a range of legumes and non\uffe2\uff80\uff90legumes, which increased the yield by \uffe2\uff89\uff8813%. These advantages of cover crops justify their widespread adoption. However, management practices in relation to cover crops will need to be adapted to specific soil, management and regional climatic conditions.
", "keywords": ["Crops", " Agricultural", "net greenhouse gas balance", "330", "Supplementary Data", "Nitrogen", "QH301 Biology", "Supplementary data available", "12. Responsible consumption", "Nitrous oxide emissions", "QH301", "Greenhouse Gases", "Soil", "N content", "nitrate", "C sequestration", "N leaching", "Environmental Chemistry", "General Environmental Science", "NE/M019691/1", "2. Zero hunger", "Global and Planetary Change", "Catch crop", "Ecology", "Soil organic carbon", "green manure", "Natural Environment Research Council (NERC)", "Research Review", "Agriculture", "04 agricultural and veterinary sciences", "15. Life on land", "yield", "Crop Production", "13. Climate action", "N in grain", "Biotechnology and Biological Sciences Research Council (BBSRC)", "Cover crop", "0401 agriculture", " forestry", " and fisheries", "BB/N013484/1", "BB/N013468/1"]}, "links": [{"href": "https://doi.org/10.1111/gcb.14644"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.14644", "name": "item", "description": "10.1111/gcb.14644", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.14644"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-05-13T00:00:00Z"}}, {"id": "10.1111/gcb.12666", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:19:20Z", "type": "Journal Article", "created": "2014-06-21", "title": "Interactive Effects Of Elevated Co2 And Nitrogen Deposition On Fatty Acid Molecular And Isotope Composition Of Above- And Belowground Tree Biomass And Forest Soil Fractions", "description": "AbstractAtmospheric carbon dioxide (CO2) and reactive nitrogen (N) concentrations have been increasing due to human activities and impact the global carbon (C) cycle by affecting plant photosynthesis and decomposition processes in soil. Large amounts of C are stored in plants and soils, but the mechanisms behind the stabilization of plant\uffe2\uff80\uff90 and microbial\uffe2\uff80\uff90derived organic matter (OM) in soils are still under debate and it is not clear how N deposition affects soil OM dynamics. Here, we studied the effects of 4\uffc2\uffa0years of elevated (13C\uffe2\uff80\uff90depleted) CO2 and N deposition in forest ecosystems established in open\uffe2\uff80\uff90top chambers on composition and turnover of fatty acids (FAs) in plants and soils. FAs served as biomarkers for plant\uffe2\uff80\uff90 and microbial\uffe2\uff80\uff90derived OM in soil density fractions. We analyzed above\uffe2\uff80\uff90 and belowground plant biomass of beech and spruce trees as well as soil density fractions for the total organic C and FA molecular and isotope (\uffce\uffb413C) composition. FAs did not accumulate relative to total organic C in fine mineral fractions, showing that FAs are not effectively stabilized by association with soil minerals. The \uffce\uffb413C values of FAs in plant biomass increased under high N deposition. However, the N effect was only apparent under elevated CO2 suggesting a N limitation of the system. In soil fractions, only isotope compositions of short\uffe2\uff80\uff90chain FAs (C16+18) were affected. Fractions of \uffe2\uff80\uff98new\uffe2\uff80\uff99 (experimental\uffe2\uff80\uff90derived) FAs were calculated using isotope depletion in elevated CO2 plots and decreased from free light to fine mineral fractions. \uffe2\uff80\uff98New\uffe2\uff80\uff99 FAs were higher in short\uffe2\uff80\uff90chain compared to long\uffe2\uff80\uff90chain FAs (C20\uffe2\uff88\uff9230), indicating a faster turnover of short\uffe2\uff80\uff90chain compared to long\uffe2\uff80\uff90chain FAs. Increased N deposition did not significantly affect the quantity of \uffe2\uff80\uff98new\uffe2\uff80\uff99 FAs in soil fractions, but showed a tendency of increased amounts of \uffe2\uff80\uff98old\uffe2\uff80\uff99 (pre\uffe2\uff80\uff90experimental) C suggesting that decomposition of \uffe2\uff80\uff98old\uffe2\uff80\uff99 C is retarded by high N inputs.
", "keywords": ["UFSP13-8 Global Change and Biodiversity", "2306 Global and Planetary Change", "Chemical Fractionation", "Forests", "2300 General Environmental Science", "Soil", "Fagus", "Environmental Chemistry", "Biomass", "Photosynthesis", "Picea", "General Environmental Science", "2. Zero hunger", "Global and Planetary Change", "Analysis of Variance", "Carbon Isotopes", "Ecology", "Atmosphere", "Fatty Acids", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "Reactive Nitrogen Species", "13. Climate action", "2304 Environmental Chemistry", "570 Life sciences; biology", "0401 agriculture", " forestry", " and fisheries", "2303 Ecology"]}, "links": [{"href": "https://doi.org/10.1111/gcb.12666"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.12666", "name": "item", "description": "10.1111/gcb.12666", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.12666"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-07-08T00:00:00Z"}}, {"id": "10.1111/gcb.14878", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:19:22Z", "type": "Journal Article", "created": "2019-10-22", "title": "Which practices co\u2010deliver food security, climate change mitigation and adaptation, and combat land degradation and desertification?", "description": "AbstractThere is a clear need for transformative change in the land management and food production sectors to address the global land challenges of climate change mitigation, climate change adaptation, combatting land degradation and desertification, and delivering food security (referred to hereafter as \uffe2\uff80\uff9cland challenges\uffe2\uff80\uff9d). We assess the potential for 40 practices to address these land challenges and find that: Nine options deliver medium to large benefits for all four land challenges. A further two options have no global estimates for adaptation, but have medium to large benefits for all other land challenges. Five options have large mitigation potential (>3\uffc2\uffa0Gt CO2eq/year) without adverse impacts on the other land challenges. Five options have moderate mitigation potential, with no adverse impacts on the other land challenges. Sixteen practices have large adaptation potential (>25 million people benefit), without adverse side effects on other land challenges. Most practices can be applied without competing for available land. However, seven options could result in competition for land. A large number of practices do not require dedicated land, including several land management options, all value chain options, and all risk management options. Four options could greatly increase competition for land if applied at a large scale, though the impact is scale and context specific, highlighting the need for safeguards to ensure that expansion of land for mitigation does not impact natural systems and food security. A number of practices, such as increased food productivity, dietary change and reduced food loss and waste, can reduce demand for land conversion, thereby potentially freeing\uffe2\uff80\uff90up land and creating opportunities for enhanced implementation of other practices, making them important components of portfolios of practices to address the combined land challenges.There is growing international interest in better managing soils to increase soil organic carbon (SOC) content to contribute to climate change mitigation, to enhance resilience to climate change and to underpin food security, through initiatives such as international \uffe2\uff80\uff984p1000\uffe2\uff80\uff99 initiative and the FAO's Global assessment of SOC sequestration potential (GSOCseq) programme. Since SOC content of soils cannot be easily measured, a key barrier to implementing programmes to increase SOC at large scale, is the need for credible and reliable measurement/monitoring, reporting and verification (MRV) platforms, both for national reporting and for emissions trading. Without such platforms, investments could be considered risky. In this paper, we review methods and challenges of measuring SOC change directly in soils, before examining some recent novel developments that show promise for quantifying SOC. We describe how repeat soil surveys are used to estimate changes in SOC over time, and how long\uffe2\uff80\uff90term experiments and space\uffe2\uff80\uff90for\uffe2\uff80\uff90time substitution sites can serve as sources of knowledge and can be used to test models, and as potential benchmark sites in global frameworks to estimate SOC change. We briefly consider models that can be used to simulate and project change in SOC and examine the MRV platforms for SOC change already in use in various countries/regions. In the final section, we bring together the various components described in this review, to describe a new vision for a global framework for MRV of SOC change, to support national and international initiatives seeking to effect change in the way we manage our soils.This study evaluates the dynamics of soil organic carbon (SOC) under perennial crops across the globe. It quantifies the effect of change from annual to perennial crops and the subsequent temporal changes in SOC stocks during the perennial crop cycle. It also presents an empirical model to estimate changes in the SOC content under crops as a function of time, land use, and site characteristics. We used a harmonized global dataset containing paired\uffe2\uff80\uff90comparison empirical values of SOC and different types of perennial crops (perennial grasses, palms, and woody plants) with different end uses: bioenergy, food, other bio\uffe2\uff80\uff90products, and short rotation coppice. Salient outcomes include: a 20\uffe2\uff80\uff90year period encompassing a change from annual to perennial crops led to an average 20% increase in SOC at 0\uffe2\uff80\uff9330\uffc2\uffa0cm (6.0\uffc2\uffa0\uffc2\uffb1\uffc2\uffa04.6\uffc2\uffa0Mg/ha gain) and a total 10% increase over the 0\uffe2\uff80\uff93100\uffc2\uffa0cm soil profile (5.7\uffc2\uffa0\uffc2\uffb1\uffc2\uffa010.9\uffc2\uffa0Mg/ha). A change from natural pasture to perennial crop decreased SOC stocks by 1% over 0\uffe2\uff80\uff9330\uffc2\uffa0cm (\uffe2\uff88\uff922.5\uffc2\uffa0\uffc2\uffb1\uffc2\uffa04.2\uffc2\uffa0Mg/ha) and 10% over 0\uffe2\uff80\uff93100\uffc2\uffa0cm (\uffe2\uff88\uff9213.6\uffc2\uffa0\uffc2\uffb1\uffc2\uffa08.9\uffc2\uffa0Mg/ha). The effect of a land use change from forest to perennial crops did not show significant impacts, probably due to the limited number of plots; but the data indicated that while a 2% increase in SOC was observed at 0\uffe2\uff80\uff9330\uffc2\uffa0cm (16.81\uffc2\uffa0\uffc2\uffb1\uffc2\uffa055.1\uffc2\uffa0Mg/ha), a decrease in 24% was observed at 30\uffe2\uff80\uff93100\uffc2\uffa0cm (\uffe2\uff88\uff9240.1\uffc2\uffa0\uffc2\uffb1\uffc2\uffa016.8\uffc2\uffa0Mg/ha). Perennial crops generally accumulate SOC through time, especially woody crops; and temperature was the main driver explaining differences in SOC dynamics, followed by crop age, soil bulk density, clay content, and depth. We present empirical evidence showing that the FAO perennialization strategy is reasonable, underscoring the role of perennial crops as a useful component of climate change mitigation strategies.Simulation models represent soil organic carbon (SOC) dynamics in global carbon (C) cycle scenarios to support climate\uffe2\uff80\uff90change studies. It is imperative to increase confidence in long\uffe2\uff80\uff90term predictions of SOC dynamics by reducing the uncertainty in model estimates. We evaluated SOC simulated from an ensemble of 26 process\uffe2\uff80\uff90based C models by comparing simulations to experimental data from seven long\uffe2\uff80\uff90term bare\uffe2\uff80\uff90fallow (vegetation\uffe2\uff80\uff90free) plots at six sites: Denmark (two sites), France, Russia, Sweden and the United Kingdom. The decay of SOC in these plots has been monitored for decades since the last inputs of plant material, providing the opportunity to test decomposition without the continuous input of new organic material. The models were run independently over multi\uffe2\uff80\uff90year simulation periods (from 28 to 80\uffc2\uffa0years) in a blind test with no calibration (Bln) and with the following three calibration scenarios, each providing different levels of information and/or allowing different levels of model fitting: (a) calibrating decomposition parameters separately at each experimental site (Spe); (b) using a generic, knowledge\uffe2\uff80\uff90based, parameterization applicable in the Central European region (Gen); and (c) using a combination of both (a) and (b) strategies (Mix). We addressed uncertainties from different modelling approaches with or without spin\uffe2\uff80\uff90up initialization of SOC. Changes in the multi\uffe2\uff80\uff90model median (MMM) of SOC were used as descriptors of the ensemble performance. On average across sites, Gen proved adequate in describing changes in SOC, with MMM equal to average SOC (and standard deviation) of 39.2 (\uffc2\uffb115.5)\uffc2\uffa0Mg\uffc2\uffa0C/ha compared to the observed mean of 36.0 (\uffc2\uffb119.7)\uffc2\uffa0Mg\uffc2\uffa0C/ha (last observed year), indicating sufficiently reliable SOC estimates. Moving to Mix (37.5\uffc2\uffa0\uffc2\uffb1\uffc2\uffa016.7\uffc2\uffa0Mg\uffc2\uffa0C/ha) and Spe (36.8\uffc2\uffa0\uffc2\uffb1\uffc2\uffa019.8\uffc2\uffa0Mg\uffc2\uffa0C/ha) provided only marginal gains in accuracy, but modellers would need to apply more knowledge and a greater calibration effort than in Gen, thereby limiting the wider applicability of models.
", "keywords": ["[SDE] Environmental Sciences", "330", "550", "Supplementary Data", "soil organic carbon dynamics", "QH301 Biology", "[SDE.MCG]Environmental Sciences/Global Changes", "Soil organic carbon dynamics", "bare\u2010fallow soils", "[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study", "630", "protocol for model comparison", "Russia", "QH301", "Soil", "NE/M021327/1", "SDG 13 - Climate Action", "Environmental Chemistry", "774378", "process based models", "European Commission", "[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil study", "General Environmental Science", "Sweden", "Global and Planetary Change", "Ecology", "Natural Environment Research Council (NERC)", "NE/P019455/1", "bare-fallow soils", "Uncertainty", "Agriculture", "04 agricultural and veterinary sciences", "15. Life on land", "Carbon", "United Kingdom", "process-based models", "[SDE.MCG] Environmental Sciences/Global Changes", "13. Climate action", "[SDE]Environmental Sciences", "bare-fallow soils; model parametrization; process-based models; protocol for model comparison; soil organic carbon dynamics", "0401 agriculture", " forestry", " and fisheries", "774124", "France", "bare fallow soils", "model parametrization"]}, "links": [{"href": "https://air.unimi.it/bitstream/2434/809186/2/GCB-20-1834_Proof_fl.pdf"}, {"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/gcb.15441"}, {"href": "https://doi.org/10.1111/gcb.15441"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.15441", "name": "item", "description": "10.1111/gcb.15441", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.15441"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-11-24T00:00:00Z"}}, {"id": "10.1111/gcb.16267", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:19:23Z", "type": "Journal Article", "created": "2022-05-31", "title": "Land\u2010based climate solutions for the United States", "description": "AbstractMeeting end\uffe2\uff80\uff90of\uffe2\uff80\uff90century global warming targets requires aggressive action on multiple fronts. Recent reports note the futility of addressing mitigation goals without fully engaging the agricultural sector, yet no available assessments combine both nature\uffe2\uff80\uff90based solutions (reforestation, grassland and wetland protection, and agricultural practice change) and cellulosic bioenergy for a single geographic region. Collectively, these solutions might offer a suite of climate, biodiversity, and other benefits greater than either alone. Nature\uffe2\uff80\uff90based solutions are largely constrained by the duration of carbon accrual in soils and forest biomass; each of these carbon pools will eventually saturate. Bioenergy solutions can last indefinitely but carry significant environmental risk if carelessly deployed. We detail a simplified scenario for the United States that illustrates the benefits of combining approaches. We assign a portion of non\uffe2\uff80\uff90forested former cropland to bioenergy sufficient to meet projected mid\uffe2\uff80\uff90century transportation needs, with the remainder assigned to nature\uffe2\uff80\uff90based solutions such as reforestation. Bottom\uffe2\uff80\uff90up mitigation potentials for the aggregate contributions of crop, grazing, forest, and bioenergy lands are assessed by including in a Monte Carlo model conservative ranges for cost\uffe2\uff80\uff90effective local mitigation capacities, together with ranges for (a) areal extents that avoid double counting and include realistic adoption rates and (b) the projected duration of different carbon sinks. The projected duration illustrates the net effect of eventually saturating soil carbon pools in the case of most strategies, and additionally saturating biomass carbon pools in the case of forest management. Results show a conservative end\uffe2\uff80\uff90of\uffe2\uff80\uff90century mitigation capacity of 110 (57\uffe2\uff80\uff93178) Gt CO2e for the U.S., ~50% higher than existing estimates that prioritize nature\uffe2\uff80\uff90based or bioenergy solutions separately. Further research is needed to shrink uncertainties, but there is sufficient confidence in the general magnitude and direction of a combined approach to plan for deployment now.Anthropogenic nitrogen (N) loading alters soil ammonia\uffe2\uff80\uff90oxidizing archaea (AOA) and bacteria (AOB) abundances, likely leading to substantial changes in soil nitrification. However, the factors and mechanisms determining the responses of soil AOA:AOB and nitrification to N loading are still unclear, making it difficult to predict future changes in soil nitrification. Herein, we synthesize\uffc2\uffa068 field studies around the world to evaluate the impacts of N loading on soil ammonia oxidizers and nitrification. Across a wide range of biotic and abiotic factors, climate is the most important driver of the responses of AOA:AOB to N loading. Climate does not directly affect the N\uffe2\uff80\uff90stimulation of nitrification, but does so via climate\uffe2\uff80\uff90related shifts in AOA:AOB. Specifically, climate modulates the responses of AOA:AOB to N loading by affecting soil pH, N\uffe2\uff80\uff90availability and moisture. AOB play a dominant role in affecting nitrification in dry climates, while the impacts from AOA can exceed AOB in humid climates. Together, these results suggest that climate\uffe2\uff80\uff90related shifts in soil ammonia\uffe2\uff80\uff90oxidizing community maintain the N\uffe2\uff80\uff90stimulation of nitrification, highlighting the importance of microbial community composition in mediating the responses of the soil N cycle to N loading.The effect of liming on the flow of recently photosynthesized carbon to rhizosphere soil was studied using 13CO2 pulse labelling, in an upland grassland ecosystem in Scotland. The use of 13C enabled detection, in the field, of the effect of a 4\uffe2\uff80\uff90year liming period of selected soil plots on C allocation from plant biomass to soil, in comparison with unlimed plots. Photosynthetic rates and carbon turnover were higher in plants grown in limed soils than in those from unlimed plots. Higher \uffce\uffb413C\uffe2\uff80\uffb0 values were detected in shoots from limed plants than in those from unlimed plants in samples clipped within 15 days of the end of pulse labelling. Analysis of the aboveground plant production corresponding to the 4\uffe2\uff80\uff90year period of liming indicated that the standing biomass was higher in plots that received lime. Lower \uffce\uffb413C\uffe2\uff80\uffb0 values in limed roots compared with unlimed roots were found, whereas no significant difference was detected between soil samples. Extrapolation of our results indicated that more C has been lost through the soil than has been gained via photosynthetic assimilation because of pasture liming in Scotland during the period 1990\uffe2\uff80\uff931998. However, the uncertainty associated with such extrapolation based on this single study is high and these estimates are provided only to set our findings in the broader context of national soil carbon emissions.
", "keywords": ["2. Zero hunger", "/dk/atira/pure/subjectarea/asjc/2300/2306", "name=Global and Planetary Change", "/dk/atira/pure/subjectarea/asjc/2300/2304", "550", "rhizosphere soil", "liming", "04 agricultural and veterinary sciences", "15. Life on land", "630", "upland grassland", "name=Environmental Chemistry", "carbon pools", "name=Ecology", "0401 agriculture", " forestry", " and fisheries", "name=General Environmental Science", "carbon turnover", "/dk/atira/pure/subjectarea/asjc/2300/2303", "13C", "/dk/atira/pure/subjectarea/asjc/2300/2300"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2004.00883.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2004.00883.x", "name": "item", "description": "10.1111/j.1365-2486.2004.00883.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2004.00883.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-12-01T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2006.01118.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:19:30Z", "type": "Journal Article", "created": "2006-04-23", "title": "Woody Biomass Production During The Second Rotation Of A Bio-Energy Populus Plantation Increases In A Future High Co2 World", "description": "AbstractThe quickly rising atmospheric carbon dioxide (CO2)\uffe2\uff80\uff90levels, justify the need to explore all carbon (C) sequestration possibilities that might mitigate the current CO2increase. Here, we report the likely impact of future increases in atmospheric CO2on woody biomass production of three poplar species (Populus albaL. clone 2AS\uffe2\uff80\uff9011,Populus nigraL. clone Jean Pourtet andPopulus\uffc3\uff97euramericanaclone I\uffe2\uff80\uff90214). Trees were growing in a high\uffe2\uff80\uff90density coppice plantation during the second rotation (i.e., regrowth after coppice; 2002\uffe2\uff80\uff932004; POPFACE/EUROFACE). Six plots were studied, half of which were continuously fumigated with CO2(FACE; free air carbon dioxide enrichment of 550\uffe2\uff80\uff83ppm). Half of each plot was fertilized to study the interaction between CO2and nutrient fertilization. At the end of the second rotation, selective above\uffe2\uff80\uff90 and belowground harvests were performed to estimate the productivity of this bio\uffe2\uff80\uff90energy plantation. Fertilization did not affect growth of the poplar trees, which was likely because of the high rates of fertilization during the previous agricultural land use. In contrast, elevated CO2enhanced biomass production by up to 29%, and this stimulation did not differ between above\uffe2\uff80\uff90 and belowground parts. The increased initial stump size resulting from elevated CO2during the first rotation (1999\uffe2\uff80\uff932001) could not solely explain the observed final biomass increase. The larger leaf area index after canopy closure and the absence of any major photosynthetic acclimation after 6 years of fumigation caused the sustained CO2\uffe2\uff80\uff90induced biomass increase after coppice. These results suggest that, under future CO2concentrations, managed poplar coppice systems may exhibit higher potential for C sequestration and, thus, help mitigate climate change when used as a source of C\uffe2\uff80\uff90neutral energy.
", "keywords": ["2. Zero hunger", "580", "0106 biological sciences", "570", "atmospheric co2", "elevated co2", "n-fertilization", "Global and Planetary Change", "Ecology", "growth", "enrichment face", "hybrid poplar", "04 agricultural and veterinary sciences", "15. Life on land", "7. Clean energy", "01 natural sciences", "pinus-taeda", "poplar plantation", "Bio-energy; Biomass distribution; EUROFACE; FACE; Fertilization; Leaf area index; Photosynthesis; Populus; Short rotation coppice; Woody biomass", "13. Climate action", "no3 availability", "Environmental Chemistry", "0401 agriculture", " forestry", " and fisheries", "water-stress", "General Environmental Science"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2006.01118.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2006.01118.x", "name": "item", "description": "10.1111/j.1365-2486.2006.01118.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2006.01118.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2006-04-13T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2012.02798.x", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-04-13T16:19:36Z", "type": "Journal Article", "created": "2012-07-28", "title": "Increasing Soil Methane Sink Along A 120-Year Afforestation Chronosequence Is Driven By Soil Moisture", "description": "AbstractUpland soils are important sinks for atmospheric methane (CH4), a process essentially driven by methanotrophic bacteria. Soil CH4 uptake often depends on land use, with afforestation generally increasing the soil CH4 sink. However, the mechanisms driving these changes are not well understood to date. We measured soil CH4 and N2O fluxes along an afforestation chronosequence with Norway spruce (Picea abies L.) established on an extensively grazed subalpine pasture. Our experimental design included forest stands with ages ranging from 25 to >120\uffc2\uffa0years and included a factorial cattle urine addition treatment to test for the sensitivity of soil CH4 uptake to N application. Mean CH4 uptake significantly increased with stand age on all sampling dates. In contrast, CH4 oxidation by sieved soils incubated in the laboratory did not show a similar age dependency. Soil CH4 uptake was unrelated to soil N status (but cattle urine additions stimulated N2O emission). Our data indicated that soil CH4 uptake in older forest stands was driven by reduced soil water content, which resulted in a facilitated diffusion of atmospheric CH4 into soils. The lower soil moisture likely resulted from increased interception and/or evapotranspiration in the older forest stands. This mechanism contrasts alternative explanations focusing on nitrogen dynamics or the composition of methanotrophic communities, although these factors also might be at play. Our findings further imply that the current dramatic increase in forested area increases CH4 uptake in alpine regions.
", "keywords": ["2300 General Environmental Science", "2. Zero hunger", "10127 Institute of Evolutionary Biology and Environmental Studies", "13. Climate action", "2304 Environmental Chemistry", "570 Life sciences; biology", "590 Animals (Zoology)", "2306 Global and Planetary Change", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "2303 Ecology", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2012.02798.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2012.02798.x", "name": "item", "description": "10.1111/j.1365-2486.2012.02798.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2012.02798.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-09-07T00:00:00Z"}}, {"id": "10.3389/ffunb.2021.716385", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:21:40Z", "type": "Journal Article", "created": "2021-09-29", "title": "In-depth Phylogenomic Analysis of Arbuscular Mycorrhizal Fungi Based on a Comprehensive Set of de novo Genome Assemblies", "description": "Morphological characters and nuclear ribosomal DNA (rDNA) phylogenies have so far been the basis of the current classifications of arbuscular mycorrhizal (AM) fungi. Improved understanding of the evolutionary history of AM fungi requires extensive ortholog sampling and analyses of genome and transcriptome data from a wide range of taxa. To circumvent the need for axenic culturing of AM fungi we gathered and combined genomic data from single nuclei to generate de novo genome assemblies covering seven families of AM fungi. We successfully sequenced the genomes of 15 AM fungal species for which genome data was not previously available. Comparative analysis of the previously published Rhizophagus irregularis DAOM197198 assembly confirm that our novel workflow generates genome assemblies suitable for phylogenomic analysis. Predicted genes of our assemblies, together with published protein sequences of AM fungi and their sister clades, were used for phylogenomic analyses. We evaluated the phylogenetic placement of Glomeromycota in relation to its sister phyla (Mucoromycota and Mortierellomycota), and found no support to reject a polytomy. Finally, we explored the phylogenetic relationships within Glomeromycota. Our results support family level classification from previous phylogenetic studies, and the polyphyly of the order Glomerales with Claroideoglomeraceae as the sister group to Glomeraceae and Diversisporales.
", "keywords": ["0301 basic medicine", "Evolutionary Biology", "0303 health sciences", "Biologisk systematik", "topology", "572", "Plant culture", "Biological Systematics", "15. Life on land", "single nuclei sequencing", "SB1-1110", "Evolutionsbiologi", "03 medical and health sciences", "genomics", "General Earth and Planetary Sciences", "Fungal Biology", "phylogenetic", "Glomeromycota", "General Environmental Science"]}, "links": [{"href": "https://pub.epsilon.slu.se/26757/1/montoliu-nerin_m_et_al_220120.pdf"}, {"href": "https://doi.org/10.3389/ffunb.2021.716385"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Fungal%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/ffunb.2021.716385", "name": "item", "description": "10.3389/ffunb.2021.716385", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/ffunb.2021.716385"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-11T00:00:00Z"}}, {"id": "10.17169/refubium-33058", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:20:38Z", "type": "Journal Article", "created": "2021-11-30", "title": "Microplastics Reduce the Negative Effects of Litter-Derived Plant Secondary Metabolites on Nematodes in Soil", "description": "Microplastics and plant litter are ubiquitous in the soil environment, and both materials can influence soil properties and biota. Plant litter releases secondary metabolites (e.g., phenolic compounds) during the decomposition process, including chemical compounds active in plant defense. Effects of microplastics and plant litter on soil biota have been studied independently but we have limited information about the combined effects of both sources of chemicals. Here, we specifically focused on the interaction between plant litter and microplastics, as well as their potential effects on soil biota (i.e., nematodes). We used soils from a previous experiment that included three different types of microplastic fibers (MFs) and four different types of plant litter, which were incubated in the soil in all combinations of materials. After soil incubation (42 days) in the previous experiment, we here tested for effects on nematodes (Caenorhabditis elegans). Plant litter treatments negatively affected the reproduction of nematodes, but these effects were reduced when the soils were incubated along with MFs. We measured the phenolic concentrations in plant litter extracts in a kinetic experiment and found that phenolic concentrations significantly decreased with some of the MF additions. Our results suggest that microplastics can affect the potential effects of natural chemicals such as plant phenolic compounds. We urge future studies to consider this possibility as a key explanatory process underpinning effects of microplastic in the soil environment.Microplastics and plant litter are ubiquitous in the soil environment, and both materials can influence soil properties and biota. Plant litter releases secondary metabolites (e.g., phenolic compounds) during the decomposition process, including chemical compounds active in plant defense. Effects of microplastics and plant litter on soil biota have been studied independently but we have limited information about the combined effects of both sources of chemicals. Here, we specifically focused on the interaction between plant litter and microplastics, as well as their potential effects on soil biota (i.e., nematodes). We used soils from a previous experiment that included three different types of microplastic fibers (MFs) and four different types of plant litter, which were incubated in the soil in all combinations of materials. After soil incubation (42 days) in the previous experiment, we here tested for effects on nematodes (Caenorhabditis elegans). Plant litter treatments negatively affected the reproduction of nematodes, but these effects were reduced when the soils were incubated along with MFs. We measured the phenolic concentrations in plant litter extracts in a kinetic experiment and found that phenolic concentrations significantly decreased with some of the MF additions. Our results suggest that microplastics can affect the potential effects of natural chemicals such as plant phenolic compounds. We urge future studies to consider this possibility as a key explanatory process underpinning effects of microplastic in the soil environment.
", "keywords": ["570", "phenolic compounds", "500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; Biologie", "04 agricultural and veterinary sciences", "15. Life on land", "solvent", "Environmental sciences", "adsorption", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "GE1-350", "Caenorhabditis elegans", "General Environmental Science", "fiber"]}, "links": [{"href": "https://doi.org/10.3389/fenvs.2021.790560"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Environmental%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fenvs.2021.790560", "name": "item", "description": "10.3389/fenvs.2021.790560", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fenvs.2021.790560"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-11-25T00:00:00Z"}}, {"id": "10.5281/zenodo.3465229", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-13T16:24:30Z", "type": "Report", "created": "2019-10-23", "title": "3D geological model reconstruction for liquefaction hazard assessment in the Po Plain", "description": "Proceedings of the VII ICEGE 7th International Conference on Earthquake Geotechnical Engineering, Rome, Italy, 17-20 June 2019.", "keywords": ["dynamic", "550", "earthquake; site effects; topographic effect", "0211 other engineering and technologies", "600", "02 engineering and technology", "624", "laboratory tests", "name=General Earth and Planetary Sciences", "620", "site effects", " Central italy earthquake 2016", " Amatrice", "2-D numerical models", " GIS", "0201 civil engineering", "3D Geological model", " liquefaction hazard", " earthquake", " Po Plain.", "/dk/atira/pure/subjectarea/asjc/1900/1900", "name=General Environmental Science", "sandy", "/dk/atira/pure/subjectarea/asjc/2300/2300"], "contacts": [{"organization": "C. Meisina, R. Boni\u0300, M. Bordoni, C. Lai, A. Fama\u0300, F. Bozzoni, R. M. Cosentini, D. Castaldini, D. Fontana, S. Lugli, A. Ghinoi, L. Martelli, P. Severi,", "roles": ["creator"]}]}, "links": [{"href": "https://www.iris.unict.it/bitstream/20.500.11769/386431/2/ch385.pdf"}, {"href": "https://doi.org/10.5281/zenodo.3465229"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.3465229", "name": "item", "description": "10.5281/zenodo.3465229", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.3465229"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-10-22T00:00:00Z"}}, {"id": "10871/134717", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-13T16:26:13Z", "type": "Journal Article", "created": "2023-10-27", "title": "Shifts in soil ammonia\u2010oxidizing community maintain the nitrogen stimulation of nitrification across climatic conditions", "description": "AbstractAnthropogenic nitrogen (N) loading alters soil ammonia\uffe2\uff80\uff90oxidizing archaea (AOA) and bacteria (AOB) abundances, likely leading to substantial changes in soil nitrification. However, the factors and mechanisms determining the responses of soil AOA:AOB and nitrification to N loading are still unclear, making it difficult to predict future changes in soil nitrification. Herein, we synthesize\uffc2\uffa068 field studies around the world to evaluate the impacts of N loading on soil ammonia oxidizers and nitrification. Across a wide range of biotic and abiotic factors, climate is the most important driver of the responses of AOA:AOB to N loading. Climate does not directly affect the N\uffe2\uff80\uff90stimulation of nitrification, but does so via climate\uffe2\uff80\uff90related shifts in AOA:AOB. Specifically, climate modulates the responses of AOA:AOB to N loading by affecting soil pH, N\uffe2\uff80\uff90availability and moisture. AOB play a dominant role in affecting nitrification in dry climates, while the impacts from AOA can exceed AOB in humid climates. Together, these results suggest that climate\uffe2\uff80\uff90related shifts in soil ammonia\uffe2\uff80\uff90oxidizing community maintain the N\uffe2\uff80\uff90stimulation of nitrification, highlighting the importance of microbial community composition in mediating the responses of the soil N cycle to N loading.Numerical models are crucial to understand and/or predict past and future soil organic carbon dynamics. For those models aiming at prediction, validation is a critical step to gain confidence in projections. With a comprehensive review of ~250 models, we assess how models are validated depending on their objectives and features, discuss how validation of predictive models can be improved. We find a critical lack of independent validation using observed time series. Conducting such validations should be a priority to improve the model reliability. Approximately 60% of the models we analysed are not designed for predictions, but rather for conceptual understanding of soil processes. These models provide important insights by identifying key processes and alternative formalisms that can be relevant for predictive models. We argue that combining independent validation based on observed time series and improved information flow between predictive and conceptual models will increase reliability in predictions.There is a clear need for transformative change in the land management and food production sectors to address the global land challenges of climate change mitigation, climate change adaptation, combatting land degradation and desertification, and delivering food security (referred to hereafter as \uffe2\uff80\uff9cland challenges\uffe2\uff80\uff9d). We assess the potential for 40 practices to address these land challenges and find that: Nine options deliver medium to large benefits for all four land challenges. A further two options have no global estimates for adaptation, but have medium to large benefits for all other land challenges. Five options have large mitigation potential (>3\uffc2\uffa0Gt CO2eq/year) without adverse impacts on the other land challenges. Five options have moderate mitigation potential, with no adverse impacts on the other land challenges. Sixteen practices have large adaptation potential (>25 million people benefit), without adverse side effects on other land challenges. Most practices can be applied without competing for available land. However, seven options could result in competition for land. A large number of practices do not require dedicated land, including several land management options, all value chain options, and all risk management options. Four options could greatly increase competition for land if applied at a large scale, though the impact is scale and context specific, highlighting the need for safeguards to ensure that expansion of land for mitigation does not impact natural systems and food security. A number of practices, such as increased food productivity, dietary change and reduced food loss and waste, can reduce demand for land conversion, thereby potentially freeing\uffe2\uff80\uff90up land and creating opportunities for enhanced implementation of other practices, making them important components of portfolios of practices to address the combined land challenges.There is growing international interest in better managing soils to increase soil organic carbon (SOC) content to contribute to climate change mitigation, to enhance resilience to climate change and to underpin food security, through initiatives such as international \uffe2\uff80\uff984p1000\uffe2\uff80\uff99 initiative and the FAO's Global assessment of SOC sequestration potential (GSOCseq) programme. Since SOC content of soils cannot be easily measured, a key barrier to implementing programmes to increase SOC at large scale, is the need for credible and reliable measurement/monitoring, reporting and verification (MRV) platforms, both for national reporting and for emissions trading. Without such platforms, investments could be considered risky. In this paper, we review methods and challenges of measuring SOC change directly in soils, before examining some recent novel developments that show promise for quantifying SOC. We describe how repeat soil surveys are used to estimate changes in SOC over time, and how long\uffe2\uff80\uff90term experiments and space\uffe2\uff80\uff90for\uffe2\uff80\uff90time substitution sites can serve as sources of knowledge and can be used to test models, and as potential benchmark sites in global frameworks to estimate SOC change. We briefly consider models that can be used to simulate and project change in SOC and examine the MRV platforms for SOC change already in use in various countries/regions. In the final section, we bring together the various components described in this review, to describe a new vision for a global framework for MRV of SOC change, to support national and international initiatives seeking to effect change in the way we manage our soils.This study evaluates the dynamics of soil organic carbon (SOC) under perennial crops across the globe. It quantifies the effect of change from annual to perennial crops and the subsequent temporal changes in SOC stocks during the perennial crop cycle. It also presents an empirical model to estimate changes in the SOC content under crops as a function of time, land use, and site characteristics. We used a harmonized global dataset containing paired\uffe2\uff80\uff90comparison empirical values of SOC and different types of perennial crops (perennial grasses, palms, and woody plants) with different end uses: bioenergy, food, other bio\uffe2\uff80\uff90products, and short rotation coppice. Salient outcomes include: a 20\uffe2\uff80\uff90year period encompassing a change from annual to perennial crops led to an average 20% increase in SOC at 0\uffe2\uff80\uff9330\uffc2\uffa0cm (6.0\uffc2\uffa0\uffc2\uffb1\uffc2\uffa04.6\uffc2\uffa0Mg/ha gain) and a total 10% increase over the 0\uffe2\uff80\uff93100\uffc2\uffa0cm soil profile (5.7\uffc2\uffa0\uffc2\uffb1\uffc2\uffa010.9\uffc2\uffa0Mg/ha). A change from natural pasture to perennial crop decreased SOC stocks by 1% over 0\uffe2\uff80\uff9330\uffc2\uffa0cm (\uffe2\uff88\uff922.5\uffc2\uffa0\uffc2\uffb1\uffc2\uffa04.2\uffc2\uffa0Mg/ha) and 10% over 0\uffe2\uff80\uff93100\uffc2\uffa0cm (\uffe2\uff88\uff9213.6\uffc2\uffa0\uffc2\uffb1\uffc2\uffa08.9\uffc2\uffa0Mg/ha). The effect of a land use change from forest to perennial crops did not show significant impacts, probably due to the limited number of plots; but the data indicated that while a 2% increase in SOC was observed at 0\uffe2\uff80\uff9330\uffc2\uffa0cm (16.81\uffc2\uffa0\uffc2\uffb1\uffc2\uffa055.1\uffc2\uffa0Mg/ha), a decrease in 24% was observed at 30\uffe2\uff80\uff93100\uffc2\uffa0cm (\uffe2\uff88\uff9240.1\uffc2\uffa0\uffc2\uffb1\uffc2\uffa016.8\uffc2\uffa0Mg/ha). Perennial crops generally accumulate SOC through time, especially woody crops; and temperature was the main driver explaining differences in SOC dynamics, followed by crop age, soil bulk density, clay content, and depth. We present empirical evidence showing that the FAO perennialization strategy is reasonable, underscoring the role of perennial crops as a useful component of climate change mitigation strategies.Simulation models represent soil organic carbon (SOC) dynamics in global carbon (C) cycle scenarios to support climate\uffe2\uff80\uff90change studies. It is imperative to increase confidence in long\uffe2\uff80\uff90term predictions of SOC dynamics by reducing the uncertainty in model estimates. We evaluated SOC simulated from an ensemble of 26 process\uffe2\uff80\uff90based C models by comparing simulations to experimental data from seven long\uffe2\uff80\uff90term bare\uffe2\uff80\uff90fallow (vegetation\uffe2\uff80\uff90free) plots at six sites: Denmark (two sites), France, Russia, Sweden and the United Kingdom. The decay of SOC in these plots has been monitored for decades since the last inputs of plant material, providing the opportunity to test decomposition without the continuous input of new organic material. The models were run independently over multi\uffe2\uff80\uff90year simulation periods (from 28 to 80\uffc2\uffa0years) in a blind test with no calibration (Bln) and with the following three calibration scenarios, each providing different levels of information and/or allowing different levels of model fitting: (a) calibrating decomposition parameters separately at each experimental site (Spe); (b) using a generic, knowledge\uffe2\uff80\uff90based, parameterization applicable in the Central European region (Gen); and (c) using a combination of both (a) and (b) strategies (Mix). We addressed uncertainties from different modelling approaches with or without spin\uffe2\uff80\uff90up initialization of SOC. Changes in the multi\uffe2\uff80\uff90model median (MMM) of SOC were used as descriptors of the ensemble performance. On average across sites, Gen proved adequate in describing changes in SOC, with MMM equal to average SOC (and standard deviation) of 39.2 (\uffc2\uffb115.5)\uffc2\uffa0Mg\uffc2\uffa0C/ha compared to the observed mean of 36.0 (\uffc2\uffb119.7)\uffc2\uffa0Mg\uffc2\uffa0C/ha (last observed year), indicating sufficiently reliable SOC estimates. Moving to Mix (37.5\uffc2\uffa0\uffc2\uffb1\uffc2\uffa016.7\uffc2\uffa0Mg\uffc2\uffa0C/ha) and Spe (36.8\uffc2\uffa0\uffc2\uffb1\uffc2\uffa019.8\uffc2\uffa0Mg\uffc2\uffa0C/ha) provided only marginal gains in accuracy, but modellers would need to apply more knowledge and a greater calibration effort than in Gen, thereby limiting the wider applicability of models.Meeting end\uffe2\uff80\uff90of\uffe2\uff80\uff90century global warming targets requires aggressive action on multiple fronts. Recent reports note the futility of addressing mitigation goals without fully engaging the agricultural sector, yet no available assessments combine both nature\uffe2\uff80\uff90based solutions (reforestation, grassland and wetland protection, and agricultural practice change) and cellulosic bioenergy for a single geographic region. Collectively, these solutions might offer a suite of climate, biodiversity, and other benefits greater than either alone. Nature\uffe2\uff80\uff90based solutions are largely constrained by the duration of carbon accrual in soils and forest biomass; each of these carbon pools will eventually saturate. Bioenergy solutions can last indefinitely but carry significant environmental risk if carelessly deployed. We detail a simplified scenario for the United States that illustrates the benefits of combining approaches. We assign a portion of non\uffe2\uff80\uff90forested former cropland to bioenergy sufficient to meet projected mid\uffe2\uff80\uff90century transportation needs, with the remainder assigned to nature\uffe2\uff80\uff90based solutions such as reforestation. Bottom\uffe2\uff80\uff90up mitigation potentials for the aggregate contributions of crop, grazing, forest, and bioenergy lands are assessed by including in a Monte Carlo model conservative ranges for cost\uffe2\uff80\uff90effective local mitigation capacities, together with ranges for (a) areal extents that avoid double counting and include realistic adoption rates and (b) the projected duration of different carbon sinks. The projected duration illustrates the net effect of eventually saturating soil carbon pools in the case of most strategies, and additionally saturating biomass carbon pools in the case of forest management. Results show a conservative end\uffe2\uff80\uff90of\uffe2\uff80\uff90century mitigation capacity of 110 (57\uffe2\uff80\uff93178) Gt CO2e for the U.S., ~50% higher than existing estimates that prioritize nature\uffe2\uff80\uff90based or bioenergy solutions separately. Further research is needed to shrink uncertainties, but there is sufficient confidence in the general magnitude and direction of a combined approach to plan for deployment now.Microplastics and plant litter are ubiquitous in the soil environment, and both materials can influence soil properties and biota. Plant litter releases secondary metabolites (e.g., phenolic compounds) during the decomposition process, including chemical compounds active in plant defense. Effects of microplastics and plant litter on soil biota have been studied independently but we have limited information about the combined effects of both sources of chemicals. Here, we specifically focused on the interaction between plant litter and microplastics, as well as their potential effects on soil biota (i.e., nematodes). We used soils from a previous experiment that included three different types of microplastic fibers (MFs) and four different types of plant litter, which were incubated in the soil in all combinations of materials. After soil incubation (42 days) in the previous experiment, we here tested for effects on nematodes (Caenorhabditis elegans). Plant litter treatments negatively affected the reproduction of nematodes, but these effects were reduced when the soils were incubated along with MFs. We measured the phenolic concentrations in plant litter extracts in a kinetic experiment and found that phenolic concentrations significantly decreased with some of the MF additions. Our results suggest that microplastics can affect the potential effects of natural chemicals such as plant phenolic compounds. We urge future studies to consider this possibility as a key explanatory process underpinning effects of microplastic in the soil environment.