{"type": "FeatureCollection", "features": [{"id": "10.1007/s00374-009-0370-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:18Z", "type": "Journal Article", "created": "2009-03-25", "title": "Soil Biological Quality Of Grassland Fertilized With Adjusted Cattle Manure Slurries In Comparison With Organic And Inorganic Fertilizers", "description": "We studied the effect of five fertilizers (including two adjusted manure slurries) and an untreated control on soil biota and explored the effect on the ecosystem services they provided. Our results suggest that the available N (NO                   3                   \u2212                  and NH                   4                   +                 ) in the soil plays a central role in the effect of fertilizers on nematodes and microorganisms. Microorganisms are affected directly through nutrient availability and indirectly through grass root mass. Nematodes are affected indirectly through microbial biomass and grass root mass. A lower amount of available N in the treatment with inorganic fertilizer was linked to a higher root mass and a higher abundance and proportion of herbivorous nematodes. A higher amount of available N in the organic fertilizer treatments resulted in a twofold higher bacterial activity (measured as bacterial growth rate, viz. thymidine incorporation), a higher proportion of bacterivorous nematodes, a 30% higher potential N mineralization (aerobic incubation), and 25\u201350% more potentially mineralizable N (anaerobic incubation). Compared to inorganic fertilizer, organic fertilization increased the C total, the N total, the activity of decomposers, and the supply of nutrients via the soil food web. Within the group of organic fertilizers, there was no significant difference in C total, abundances of soil biota, and the potential N mineralization rate. There were no indications that farmyard manure or the adjusted manure slurries provided the ecosystem service \u201csupply of nutrients\u201d better than normal manure slurry. Normal manure slurry provided the highest bacterial activity and the highest amount of mineralizable N and it was the only fertilizer resulting in a positive trend in grass yield over the years\u00a02000\u20132005. The number of earthworm burrows was higher in the treatments with organic fertilizers compared to the one with the inorganic fertilizer, which suggests that organic fertilizers stimulate the ecosystem service of water regulation more than inorganic fertilizer. The trend towards higher epigeic earthworm numbers with application of farmyard manure and one of the adjusted manure slurries, combined with the negative relation between epigeic earthworms and bulk density and a significantly lower penetration resistance in the same fertilizer types, is preliminary evidence that these two organic fertilizer types contribute more to the service of soil structure maintenance than inorganic fertilizer.", "keywords": ["2. Zero hunger", "nitrogenous fertilizers", "dynamics", "04 agricultural and veterinary sciences", "15. Life on land", "pig slurry", "6. Clean water", "earthworms oligochaeta", "13. Climate action", "nematodes", "0401 agriculture", " forestry", " and fisheries", "mineralization", "microorganisms", "term", "management", "biodiversity"]}, "links": [{"href": "https://doi.org/10.1007/s00374-009-0370-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biology%20and%20Fertility%20of%20Soils", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00374-009-0370-2", "name": "item", "description": "10.1007/s00374-009-0370-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00374-009-0370-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-03-26T00:00:00Z"}}, {"id": "10.1016/j.agrformet.2025.110503", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:21Z", "type": "Journal Article", "created": "2025-03-18", "title": "Linking soil extracellular enzymes with soil respiration under altered litter inputs", "description": "<p>Climate and land-use changes have altered both litter quality and quantity, with cascading impacts on soil respiration (SR). Soil extracellular enzymes (EEs) like cellulase and ligninase are crucial for deconstructing plant litter because they convert polymers into monomers. However, whether and how changes in litter inputs influence soil cellulase and ligninase activities as well as the implications for SR remain poorly understood. We conducted a global meta-analysis of 827 observations on the responses of SR and soil cellulase and ligninase activities to litter addition and litter removal. Litter addition significantly increased cellulase activity by 25 %, whereas litter removal decreased it by 26 %. Neither litter addition nor litter removal affected ligninase activity. Changes in cellulase activity correlated positively with SR under both litter addition and litter removal, but no such relationship was found for ligninase activity. These results indicate that changes in litter inputs affect SR primarily by affecting the microbial decomposition of readily decomposable rather than more structurally complex carbon pools. In addition, the effects of changes in litter inputs on cellulase activity decreased with treatment duration, suggesting that the long-term effects of changes in litter inputs on SR might be smaller than previously thought. Our results underscore the dominant role of cellulase in mediating the responses of SR to altered litter inputs. Integrating cellulase responses to altered litter inputs into Earth system models could improve the representation of microbial processes and refine the predictions of soil carbon dynamics.</p>", "keywords": ["Soil carbon pools", "Litter alternations", "Soil respiration", "Global changes", "Soil extracellular enzymes", "Soil microorganisms"]}, "links": [{"href": "https://doi.org/10.1016/j.agrformet.2025.110503"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Forest%20Meteorology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agrformet.2025.110503", "name": "item", "description": "10.1016/j.agrformet.2025.110503", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agrformet.2025.110503"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-01T00:00:00Z"}}, {"id": "10.1002/ldr.3656", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:13:59Z", "type": "Journal Article", "created": "2020-06-07", "title": "Herbivores stimulate respiration from labile and recalcitrant soil carbon pools in grasslands of Yellowstone National Park", "description": "Abstract<p>Quantifying the effects of grazing on soil organic carbon (SOC) decomposition is of crucial importance for understanding soil C dynamics. However, less attention has been paid to the pool\uffe2\uff80\uff90specific SOC decomposition and the underlying factors associated with each C pool, representing critical knowledge gaps on soil C dynamics. In this study, we applied a state\uffe2\uff80\uff90of\uffe2\uff80\uff90the\uffe2\uff80\uff90art Bayesian data assimilation technique to re\uffe2\uff80\uff90analyze previous soil incubation data to examine how herbivores influenced the fraction and cumulative respiration of labile and recalcitrant soil C pools from seven edaphically diverse sites in Yellowstone National Park, whereas those variables were not explored in the earlier study. Our results showed that grazing significantly increased cumulative respiration from both labile and recalcitrant C pools. Greater cumulative respiration from the labile C pool was related to grazers increasing labile C pool fractions, while higher cumulative respiration from the recalcitrant C pool was associated with grazers accelerating the decomposition rate of the recalcitrant C pool. Cumulative respiration from both labile and recalcitrant C pools was positively correlated with shoot biomass, soil gravimetric moisture, and soil C and nitrogen content. Our results underscore how knowledge of pool\uffe2\uff80\uff90specific SOC decomposition can provide a better mechanistic understanding of soil C dynamics along topo\uffe2\uff80\uff90edaphic gradients in grazed grassland.</p", "keywords": ["2. Zero hunger", "decomposition", "recalcitrant carbon pool", "0401 agriculture", " forestry", " and fisheries", "soil incubation | microorganisms", "04 agricultural and veterinary sciences", "herbivores grazing", "plant productivity", "15. Life on land", "data assimilation", "labile carbon pool"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1002/ldr.3656"}, {"href": "https://doi.org/10.1002/ldr.3656"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Land%20Degradation%20%26amp%3B%20Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ldr.3656", "name": "item", "description": "10.1002/ldr.3656", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ldr.3656"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-06-07T00:00:00Z"}}, {"id": "10.1007%2fbf00328785", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:03Z", "type": "Journal Article", "created": "2004-10-21", "title": "Shoot Biomass, ?13c, Nitrogen And Chlorophyll Responses Of Two Arctic Dwarf Shrubs To In Situ Shading, Nutrient Application And Warming Simulating Climatic Change", "description": "As climatic change might induce ecophysiological changes in plants which affect their long-term performance, we investigated responses in above-ground biomass, \u03b413C, nitrogen and chlorophyll of two evergreen arctic dwarf shrubs, Cassiope tetragona and Empetrum hermaphroditum, to 5 (biomass, N) or 6 years of shading, nutrient application and air/soil warming at a dwarf shrub dominated tree-line heath (450 m a.s.l) and a high altitude fellfield (1100 m a.s.l.) in Swedish Lapland. Warming enhanced the green biomass (equivalent to the last 3-4 years of leaf production) and the ratio of green to brown biomass of C. tetragona at the fellfield, and diluted the shoot N concentration. Fertilizer application led to higher shoot N concentration and larger green-to-brown biomass ratio at both sites, and fertilizer application and warming generally had an additive effect on the green biomass. We conclude that both warming and increased soil nutrient availability stimulated the growth of C. tetragona at the fellfield whereas at the heath there was a clear increase in production only if enhanced temperature was combined with nutrient application. Across treatments C. tetragona at the fellfield had 0.6\u2030 higher \u03b413C and 1.4 mg g-1 more leaf N, and the soil organic matter \u03b413C was 1.0\u2030 higher at the fellfield than at the heath. However, an increase in shoot N concentration with altitude does not necessarily lead to higher \u03b413C as no differences in \u03b413C were observed when leaf N of the two dwarf shrubs was increased by fertilizer application c. tetragona in non-warmed plots had higher \u03b413C values than those from warmed plots at the same altitude, which provides the first in situ experimental validation of the theory that temperature partly is responsible for altitudinal trends in plant carbon isotope discrimination. Increased biomass and chlorophyll concentration of C. tetragona in warmed plots points to increased assimilation, at least at the fellfield. As the \u03b413C-based and, therefore, time-integrated estimate of the ratio of CO2 concentration in the leaf intercellular spaces to that in the atmosphere (C i/C a) also increased, warming probably enhanced the stomatal conductance relatively more than the C assimilation, which may be harmful if climatic change leads to reduced soil moisture content and increased plant competition for water. At both sites C. tetragona and E. hermaphroditum responded to shade by increasing the concentration of shoot N and photosynthetic pigments whereas biomass production (and therefore also net photosynthesis) did not decline. Shade was accompanied by a 0.6-1.3\u2030 (E. hermaphroditum) or 1.2-2.2\u2030 (C. tetragona) decrease in \u03b413C. This could be due to enhanced stomatal conductance with shading, and perhaps to shade reducing the ericoid mycorrhizal uptake of soil organic C, a factor which has been overlooked as an influence on plant \u03b413C.", "keywords": ["0106 biological sciences", "jord", "plants", "04 agricultural and veterinary sciences", "15. Life on land", "planter", "01 natural sciences", "soil", "climate change", "mikroorganismer", "13. Climate action", "Faculty of Science", "arctic", "0401 agriculture", " forestry", " and fisheries", "\u00f8kologi", "/dk/atira/pure/core/keywords/TheFacultyOfScience", "arktis", "ecology", "microorganisms"]}, "links": [{"href": "https://doi.org/10.1007%2fbf00328785"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007%2fbf00328785", "name": "item", "description": "10.1007%2fbf00328785", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007%2fbf00328785"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1996-01-01T00:00:00Z"}}, {"id": "10.1007/bf00328785", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:08Z", "type": "Journal Article", "created": "2004-10-21", "title": "Shoot Biomass, Delta C-13, Nitrogen And Chlorophyll Responses Of Two Arctic Dwarf Shrubs To In Situ Shading, Nutrient Application And Warming Simulating Climatic Change", "description": "As climatic change might induce ecophysiological changes in plants which affect their long-term performance, we investigated responses in above-ground biomass, \u03b413C, nitrogen and chlorophyll of two evergreen arctic dwarf shrubs, Cassiope tetragona and Empetrum hermaphroditum, to 5 (biomass, N) or 6 years of shading, nutrient application and air/soil warming at a dwarf shrub dominated tree-line heath (450 m a.s.l) and a high altitude fellfield (1100 m a.s.l.) in Swedish Lapland. Warming enhanced the green biomass (equivalent to the last 3-4 years of leaf production) and the ratio of green to brown biomass of C. tetragona at the fellfield, and diluted the shoot N concentration. Fertilizer application led to higher shoot N concentration and larger green-to-brown biomass ratio at both sites, and fertilizer application and warming generally had an additive effect on the green biomass. We conclude that both warming and increased soil nutrient availability stimulated the growth of C. tetragona at the fellfield whereas at the heath there was a clear increase in production only if enhanced temperature was combined with nutrient application. Across treatments C. tetragona at the fellfield had 0.6\u2030 higher \u03b413C and 1.4 mg g-1 more leaf N, and the soil organic matter \u03b413C was 1.0\u2030 higher at the fellfield than at the heath. However, an increase in shoot N concentration with altitude does not necessarily lead to higher \u03b413C as no differences in \u03b413C were observed when leaf N of the two dwarf shrubs was increased by fertilizer application c. tetragona in non-warmed plots had higher \u03b413C values than those from warmed plots at the same altitude, which provides the first in situ experimental validation of the theory that temperature partly is responsible for altitudinal trends in plant carbon isotope discrimination. Increased biomass and chlorophyll concentration of C. tetragona in warmed plots points to increased assimilation, at least at the fellfield. As the \u03b413C-based and, therefore, time-integrated estimate of the ratio of CO2 concentration in the leaf intercellular spaces to that in the atmosphere (C i/C a) also increased, warming probably enhanced the stomatal conductance relatively more than the C assimilation, which may be harmful if climatic change leads to reduced soil moisture content and increased plant competition for water. At both sites C. tetragona and E. hermaphroditum responded to shade by increasing the concentration of shoot N and photosynthetic pigments whereas biomass production (and therefore also net photosynthesis) did not decline. Shade was accompanied by a 0.6-1.3\u2030 (E. hermaphroditum) or 1.2-2.2\u2030 (C. tetragona) decrease in \u03b413C. This could be due to enhanced stomatal conductance with shading, and perhaps to shade reducing the ericoid mycorrhizal uptake of soil organic C, a factor which has been overlooked as an influence on plant \u03b413C.", "keywords": ["0106 biological sciences", "jord", "plants", "04 agricultural and veterinary sciences", "15. Life on land", "planter", "01 natural sciences", "soil", "climate change", "mikroorganismer", "13. Climate action", "Faculty of Science", "arctic", "0401 agriculture", " forestry", " and fisheries", "\u00f8kologi", "/dk/atira/pure/core/keywords/TheFacultyOfScience", "arktis", "ecology", "microorganisms"]}, "links": [{"href": "https://doi.org/10.1007/bf00328785"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/bf00328785", "name": "item", "description": "10.1007/bf00328785", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/bf00328785"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1996-01-01T00:00:00Z"}}, {"id": "10.1007/pl00008869", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:12Z", "type": "Journal Article", "created": "2006-04-10", "title": "Combined Effects Of Atmospheric Co2 And N Availability On The Belowground Carbon And Nitrogen Dynamics Of Aspen Mesocosms", "description": "It is uncertain whether elevated atmospheric CO2 will increase C storage in terrestrial ecosystems without concomitant increases in plant access to N. Elevated CO2 may alter microbial activities that regulate soil N availability by changing the amount or composition of organic substrates produced by roots. Our objective was to determine the potential for elevated CO2 to change N availability in an experimental plant-soil system by affecting the acquisition of root-derived C by soil microbes. We grew Populus tremuloides (trembling aspen) cuttings for 2 years under two levels of atmospheric CO2 (36.7 and 71.5 Pa) and at two levels of soil N (210 and 970 \u00b5g N g-1). Ambient and twice-ambient CO2 concentrations were applied using open-top chambers, and soil N availability was manipulated by mixing soils differing in organic N content. From June to October of the second growing season, we measured midday rates of soil respiration. In August, we pulse-labeled plants with 14CO2 and measured soil 14CO2 respiration and the 14C contents of plants, soils, and microorganisms after a 6-day chase period. In conjunction with the August radio-labeling and again in October, we used 15N pool dilution techniques to measure in situ rates of gross N mineralization, N immobilization by microbes, and plant N uptake. At both levels of soil N availability, elevated CO2 significantly increased whole-plant and root biomass, and marginally increased whole-plant N capital. Significant increases in soil respiration were closely linked to increases in root biomass under elevated CO2. CO2 enrichment had no significant effect on the allometric distribution of biomass or 14C among plant components, total 14C allocation belowground, or cumulative (6-day) 14CO2 soil respiration. Elevated CO2 significantly increased microbial 14C contents, indicating greater availability of microbial substrates derived from roots. The near doubling of microbial 14C contents at elevated CO2 was a relatively small quantitative change in the belowground C cycle of our experimental system, but represents an ecologically significant effect on the dynamics of microbial growth. Rates of plant N uptake during both 6-day periods in August and October were significantly greater at elevated CO2, and were closely related to fine-root biomass. Gross N mineralization was not affected by elevated CO2. Despite significantly greater rates of N immobilization under elevated CO2, standing pools of microbial N were not affected by elevated CO2, suggesting that N was cycling through microbes more rapidly. Our results contained elements of both positive and negative feedback hypotheses, and may be most relevant to young, aggrading ecosystems, where soil resources are not yet fully exploited by plant roots. If the turnover of microbial N increases, higher rates of N immobilization may not decrease N availability to plants under elevated CO2.", "keywords": ["0106 biological sciences", "root-: biomass-", "Ecology and Evolutionary Biology", "nitrogen-fixation", "Environmental-Sciences)", "01 natural sciences", "nitrogen", "biomass-", "nitrogen-cycle", "nitrogen-", "Microorganisms-", "carbon-14", "124-38-9: CARBON DIOXIDE", "C Cycle", "Spermatophytes-", "Spermatophyta-", "Key Words Atmospheric CO2", "Cellular and Developmental Biology", "Populus Tremuloides Michx", "2. Zero hunger", "carbon-dioxide: atmospheric-", "plant-nutrition", "Climatology- (Environmental-Sciences)", "Angiosperms-", "Angiospermae-", "Plants-", "Natural Resources and Environment", "04 agricultural and veterinary sciences", "global-climate-change", "microbe- (Microorganisms-)", "7727-37-9: NITROGEN", "chemical-composition", "carbon-sequestration", "mineral-uptake", "soil-biology", "Science", "Vascular-Plants", "poplars-", "respiration-", "carbon-dioxide-enrichment", "carbon-dioxide", "Populus-tremuloides [trembling-aspen] (Salicaceae-)", "carbon-cycle", "Health Sciences", "Salicaceae-: Dicotyledones-", "soil-respiration", "content", "Plantae-", "14762-75-5: CARBON-14", "mineralization-", "Molecular", "forest-soils", "15. Life on land", "Rhizodeposition", "soil-flora", "N Cycle", "13. Climate action", "cuttings-", "roots-", "Legacy", "Terrestrial-Ecology (Ecology-", "0401 agriculture", " forestry", " and fisheries", "Dicots-", "ecosystems-"], "contacts": [{"organization": "Mikan, Carl J., Zak, Donald R., Kubiske, Mark E., Pregitzer, Kurt S.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/pl00008869"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/pl00008869", "name": "item", "description": "10.1007/pl00008869", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/pl00008869"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2000-08-23T00:00:00Z"}}, {"id": "10.1007/s00374-002-0459-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:15Z", "type": "Journal Article", "created": "2003-02-13", "title": "Impact Of A Change In Tillage And Crop Residue Management Practice On Soil Chemical And Microbiological Properties In A Cereal-Producing Red Duplex Soil In Nsw, Australia", "description": "The effect of a change of tillage and crop residue management practice on the chemical and microbiological properties of a cereal-producing red duplex soil was investigated by superimposing each of three management practices (CC: conventional cultivation, stubble burnt, crop conventionally sown; DD: direct-drilling, stubble retained, no cultivation, crop direct-drilled; SI: stubble incorporated with a single cultivation, crop conventionally sown), for a 3-year period on plots previously managed with each of the same three practices for 14 years. A change from DD to CC or SI practice resulted in a significant decline, in the top 0\u20135 cm of soil, in organic C, total N, electrical conductivity, NH4-N, NO3-N, soil moisture holding capacity, microbial biomass and CO2 respiration as well as a decline in the microbial quotient (the ratio of microbial biomass C to organic C; P  0.05). However, there was a significant increase in microbial biomass and the microbial quotient in the top 0\u20135 cm of soil following the change from CC to DD or SI practice and with the change from SI to DD practice (P <0.05). Analysis of ester-linked fatty acid methyl esters (EL-FAMEs) extracted from the 0- to 5-cm and 5- to 10-cm layers of the soils of the various treatments detected changes in the FAME profiles following a change in tillage practice. A change from DD practice to SI or CC practice was associated with a significant decline in the ratio of fungal to bacterial fatty acids in the 0- to 5-cm soil (P <0.05). The results show that a change in tillage practice, particularly the cultivation of a previously minimum-tilled (direct-drilled) soil, will result in significant changes in soil chemical and microbiological properties within a 3-year period. They also show that soil microbiological properties are sensitive indicators of a change in tillage practice.", "keywords": ["2. Zero hunger", "biomass", "cellular organisms", "microbiology", "Australia", "Microbial biomass", "duplex", "04 agricultural and veterinary sciences", "Fatty acid methyl esters", "15. Life on land", "6. Clean water", "Stubble retention", "Tillage", "crop residue", "0401 agriculture", " forestry", " and fisheries", "Organic C", "Bacteria (microorganisms)", "management practice"]}, "links": [{"href": "https://doi.org/10.1007/s00374-002-0459-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biology%20and%20Fertility%20of%20Soils", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00374-002-0459-3", "name": "item", "description": "10.1007/s00374-002-0459-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00374-002-0459-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2002-05-01T00:00:00Z"}}, {"id": "10.1007/s00374-011-0539-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:18Z", "type": "Journal Article", "created": "2011-01-18", "title": "Effects Of Organic And Inorganic Fertilization On Soil Bacterial And Fungal Microbial Diversity In The Kabete Long-Term Trial, Kenya", "description": "The effects of crop manure and inorganic fertilizers on composition of microbial communities of central high land soils of Kenya are poorly known. For this reason, we have carried out a thirty-two-year-old long-term trial in Kabete, Kenya. These soils were treated with organic (maize stover (MS) at 10 t ha\u22121, farmyard manure (FYM) at 10 t ha\u22121) and inorganic fertilizers 120 kg N, 52.8 kg P (N2P2), N2P2 + MS, N2P2 + FYM, a control, and a fallow for over 30 years. We examined 16S rRNA gene and 28S rRNA gene fingerprints of bacterial and fungal diversity by PCR amplification and denaturing gradient gel electrophoresis separation, respectively. The PCR bacterial community structure and diversity were negatively affected by N2P2 and were more closely related to the bacterial structure in the soils without any addition (control) than that of soils with a combination of inorganic and organic or inorganic fertilizers alone. The effect on fungal diversity by N2P2 was different than the effect on bacterial diversity since the fungal diversity was similar to that of the N2P2 + FYM and N2P2 + MS-treated. However, soils treated with organic inputs clustered away from soils amended with inorganic inputs. Organic inputs had a positive effect on both bacterial and fungal diversity with or without chemical fertilizers. Results from this study suggested that total diversity of bacterial and fungal communities was closely related to agro-ecosystem management practices and may partially explain the yield differences observed between the different treatments.", "keywords": ["[SDV.SA]Life Sciences [q-bio]/Agricultural sciences", "Microbial diversity", "soil microorganisms", "engrais organique", "http://aims.fao.org/aos/agrovoc/c_27870", "Organic and inorganic amendments", "F08 - Syst\u00e8mes et modes de culture", "rendement des cultures", "630", "fertilisation", "biodiversit\u00e9", "http://aims.fao.org/aos/agrovoc/c_4592", "http://aims.fao.org/aos/agrovoc/c_36669", "http://aims.fao.org/aos/agrovoc/c_2018", "inorganic fertilizers", "http://aims.fao.org/aos/agrovoc/c_10795", "http://aims.fao.org/aos/agrovoc/c_34326", "fertility", "2. Zero hunger", "[SDV.SA] Life Sciences [q-bio]/Agricultural sciences", "http://aims.fao.org/aos/agrovoc/c_33949", "g\u00e9n\u00e9tique des populations", "04 agricultural and veterinary sciences", "agro\u00e9cosyst\u00e8me", "6. Clean water", "fertilit\u00e9 du sol", "PCR", "http://aims.fao.org/aos/agrovoc/c_34079", "polymerization", "community structure", "abonos inorg\u00e1nicos", "management", "570", "http://aims.fao.org/aos/agrovoc/c_7170", "http://aims.fao.org/aos/agrovoc/c_7172", "flore microbienne", "soil", "http://aims.fao.org/aos/agrovoc/c_36167", "micro-organisme du sol", "http://aims.fao.org/aos/agrovoc/c_10176", "organic fertilizers", "abonos org\u00e1nicos", "pratique culturale", "microorganismos del suelo", "suelo", "flore du sol", "P35 - Fertilit\u00e9 du sol", "P34 - Biologie du sol", "polimerizaci\u00f3n", "15. Life on land", "engrais min\u00e9ral", "http://aims.fao.org/aos/agrovoc/c_16367", "http://aims.fao.org/aos/agrovoc/c_4086", "0401 agriculture", " forestry", " and fisheries", "F04 - Fertilisation"]}, "links": [{"href": "https://doi.org/10.1007/s00374-011-0539-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biology%20and%20Fertility%20of%20Soils", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00374-011-0539-3", "name": "item", "description": "10.1007/s00374-011-0539-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00374-011-0539-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-01-19T00:00:00Z"}}, {"id": "10.1007/s10021-010-9405-7", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:27Z", "type": "Journal Article", "created": "2010-12-16", "title": "Effects Of Climate Change Drivers On Nitrous Oxide Fluxes In An Upland Temperate Grassland", "description": "Despite increasing interest in the patterns of trace gas emissions in terrestrial ecosystems, little is known about the impacts of climate change on nitrous oxide (N2O) fluxes. The aim of this study was to determine the importance of the three main drivers of climate change (warming, summer drought, and elevated CO2 concentrations) on N2O fluxes from an extensively managed, upland grassland. Over a 2-year period, we monitored N2O fluxes in an in situ ecosystem manipulation experiment simulating the climate predicted for the study area in 2080 (3.5\u00b0C temperature increase, 20% reduction in summer rainfall and atmospheric CO2 levels of 600\u00a0ppm). N2O fluxes showed significant seasonal and interannual variation irrespective of climate treatment, and were higher in summer and autumn compared with winter and spring. Overall, N2O emissions showed a positive correlation with soil temperature and rainfall. Elevated temperature had a positive impact on mean annual N2O fluxes but effects were only significant in 2007. Contrary to expectations, neither combined summer drought and warming nor the simultaneous application of elevated atmospheric CO2 concentrations, summer drought and warming had any significant effect on annual N2O fluxes. However, the maximum N2O flux rates observed during the study occurred when elevated CO2 was combined with warming and drought, suggesting the potential for important, short-term N2O\u2013N losses in enriched CO2 environments. Taken together, our results suggest that the N2O responses of temperate, extensively managed grasslands to future climate change scenarios may be primarily driven by temperature effects.", "keywords": ["ELEVATED ATMOSPHERIC CO2", "550", "warming", "[SDV]Life Sciences [q-bio]", "N2O EMISSIONS", "drought", "01 natural sciences", "FERTILIZATION", "SOIL-MICROORGANISMS", "0105 earth and related environmental sciences", "WATER-CONTENT", "2. Zero hunger", "nitrous oxide emission", "elevated CO(2)", "LAND-USE", "interannual variation", "grasslands", "04 agricultural and veterinary sciences", "15. Life on land", "BIOMASS PRODUCTION", "FILLED PORE-SPACE", "DIFFERENTLY MANAGED GRASSLANDS", "6. Clean water", "[SDV] Life Sciences [q-bio]", "13. Climate action", "ECOSYSTEM", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "https://doi.org/10.1007/s10021-010-9405-7"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecosystems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10021-010-9405-7", "name": "item", "description": "10.1007/s10021-010-9405-7", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10021-010-9405-7"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-12-17T00:00:00Z"}}, {"id": "10.1016/j.atmosenv.2006.05.008", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:31Z", "type": "Journal Article", "created": "2007-01-27", "title": "Seasonal Soil And Leaf Co2 Exchange Rates In A Mediterranean Holm Oak Forest And Their Responses To Drought Conditions", "description": "Open AccessPeer reviewed", "keywords": ["0106 biological sciences", "2. Zero hunger", "Foliar net photosynthetic rates", "Drought", "Soil VOC exchange", "Microorganisms", "04 agricultural and veterinary sciences", "15. Life on land", "Soil CO2 flux", "Roots", "01 natural sciences", "6. Clean water", "Mediterranean holm oak forest", "13. Climate action", "Soil CO2 exchange", "Monoterpenes", "Climate change", "0401 agriculture", " forestry", " and fisheries", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.atmosenv.2006.05.008"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Atmospheric%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.atmosenv.2006.05.008", "name": "item", "description": "10.1016/j.atmosenv.2006.05.008", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.atmosenv.2006.05.008"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-04-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2003.12.007", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:55Z", "type": "Journal Article", "created": "2004-02-10", "title": "Earthworm Biomass As Additional Information For Risk Assessment Of Heavy Metal Biomagnification: A Case Study For Dredged Sediment-Derived Soils And Polluted Floodplain Soils", "description": "The important role of earthworms in the biomagnification of heavy metals in terrestrial ecosystems is widely recognised. Differences in earthworm biomass between sites is mostly not accounted for in ecological risk assessment. These differences may be large depending on soil properties and pollution status. A survey of earthworm biomass and colonisation rate was carried out on dredged sediment-derived soils (DSDS). Results were compared with observations for the surrounding alluvial plains. Mainly grain size distribution and time since disposal determined earthworm biomass on DSDS, while soil pollution status of the DSDS was of lesser importance. Highest earthworm biomass was observed on sandy loam DSDS disposed at least 40 years ago.", "keywords": ["LUMBRICUS-RUBELLUS", "Geologic Sediments", "Time Factors", "colonisation", "COPPER", "earthworms", "CONFINED DISPOSAL FACILITIES", "alluvial", "Risk Assessment", "01 natural sciences", "ECOLOGICAL RISK", "CADMIUM", "EISENIA-FETIDA", "Metals", " Heavy", "Animals", "Soil Pollutants", "landfills", "MICROORGANISMS", "Biomass", "Oligochaeta", "Ecosystem", "risk", "0105 earth and related environmental sciences", "Biology and Life Sciences", "04 agricultural and veterinary sciences", "CONTAMINATED SOILS", "15. Life on land", "ORGANIC-MATTER", "13. Climate action", "Earth and Environmental Sciences", "GROWTH", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2003.12.007"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2003.12.007", "name": "item", "description": "10.1016/j.envpol.2003.12.007", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2003.12.007"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-06-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2017.12.018", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:18Z", "type": "Journal Article", "created": "2017-12-29", "title": "Unravelling The Effects Of Plant Species Diversity And Aboveground Litter Input On Soil Bacterial Communities", "description": "Abstract   In order to differentiate the effects of root functioning and aboveground litter inputs on soil bacterial communities, a pot experiment was designed using different combinations of three plant species with contrasting chemical characteristics (0, 1, 2 or 3 species per plot) grown with or without aboveground litter inputs from the same plant species (no litter, litter from 1 of the species, or litter from the 3 species). Bacterial community structure (ITS diversity-ARISA), as well as total bacteria and denitrifier abundances (qPCR targeting the 16S rDNA and nirK or nirS genes) and denitrifying enzyme activity (DEA) were determined. No clear effects of the plant and litter identities were revealed over the incubation time. Moreover, differences in litter C:N values did not influence the bacteria or denitrifier abundances nor DEA. Interestingly, litter diversity modified the bacterial community structure, while plant richness altered the total bacteria and denitrifier abundances as well as DEA. Soil moisture appeared to be the major driver of plant and litter richness effects in our experiment.", "keywords": ["Plant and litter diversity", "Plant-microorganisms' interactions", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "2. Zero hunger", "570", "13. Climate action", "community functioning", "Bacterial and denitrifying", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "[SDE.BE]Environmental Sciences/Biodiversity and Ecology", "15. Life on land", "630"]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2017.12.018"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2017.12.018", "name": "item", "description": "10.1016/j.geoderma.2017.12.018", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2017.12.018"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-05-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2022.156952", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:44Z", "type": "Journal Article", "created": "2022-06-22", "title": "Integrated organic and inorganic fertilization and reduced irrigation altered prokaryotic microbial community and diversity in different compartments of wheat root zone contributing to improved nitrogen uptake and wheat yield", "description": "Open AccessThe effect of long-term water and integrated fertilization on prokaryotic microorganisms and their regulation for crop nutrient uptake remains unknown. Therefore, the impact of soil water and integrated fertilization after eight years on prokaryotic microbial communities in different compartments of root zone and their association with wheat nitrogen (N) absorption and yield were investigated. The results showed that compared with fertilization treatments (F), water regimes (W) more drastically modulated the prokaryotic microbial community structure and diversity in bulk soil, rhizosphere and endosphere. The increase of irrigation improved the prokaryotic diversity in the rhizosphere and endosphere while decreased the diversity in the bulk soil. Application of organic fertilizers significantly improved soil organic matter (SOM) and nutrient contents, increased rhizosphere and endophytic prokaryotic microbial diversity, and elevated the relative abundance of aerobic ammonia oxidation and nitrification-related functional microorganisms in rhizosphere and endosphere. Increasing irrigation elevated the relative abundance of functional microorganisms related to aerobic ammonia oxidation and nitrification in the rhizosphere and endosphere. Soil water content (SWC) and NH4+-N as well as NO3\u2212-N were key predictors of prokaryotic microbial community composition under W and F treatments, respectively. Appropriate application of irrigation and organic fertilizers increased the relative abundance of some beneficial bacteria such as Flavobacterium. Water and fertilization treatments regulated the prokaryotic microbial communities of bulk soil, rhizosphere and endosphere by altering SWC and SOM, and provided evidence for the modulation of prokaryotic microorganisms to promote nitrogen uptake and wheat yield under long-term irrigation and fertilization. Conclusively, the addition of organic manure (50 %) with inorganic fertilizers (50 %) and reduced amount of irrigation (pre-sowing and jointing-period irrigation) decreased the application amount of chemical fertilizers and water, while increased SOM and nutrient content, improved prokaryotic diversity, and changed prokaryotic microbial community structure in the wheat root zone, resulting in enhanced nutrient uptake and wheat yield.", "keywords": ["0106 biological sciences", "Yield", "Microorganism", "Microbial population biology", "Nitrogen", "Soil Science", "Organic chemistry", "Plant Science", "01 natural sciences", "Environmental science", "Agricultural and Biological Sciences", "Soil", "Symbiotic Nitrogen Fixation in Legumes", "Soil water", "Genetics", "Fertilizers", "Biology", "Irrigation", "Soil Microbiology", "Triticum", "2. Zero hunger", "Soil organic matter", "Soil Fertility", "Physicochemical factors", "Ecology", "Bacteria", "Microbiota", "Marine Microbial Diversity and Biogeography", "Water", "Life Sciences", "04 agricultural and veterinary sciences", "15. Life on land", "Nitrification", "Agronomy", "6. Clean water", "Chemistry", "Human fertilization", "13. Climate action", "Fertilization", "FOS: Biological sciences", "Environmental Science", "Physical Sciences", "Rhizosphere", "Bulk soil", "0401 agriculture", " forestry", " and fisheries", "Prokaryotic microorganisms", "Endosphere", "Soil Carbon Dynamics and Nutrient Cycling in Ecosystems", "Nutrient"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2022.156952"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2022.156952", "name": "item", "description": "10.1016/j.scitotenv.2022.156952", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2022.156952"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-10-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2008.06.007", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:49Z", "type": "Journal Article", "created": "2008-07-10", "title": "Changes In Soil Microbial Community Structure Under Elevated Tropospheric O-3 And Co2", "description": "Abstract   We studied the effects of O 3  and CO 2  alone and in combination on soil microbial communities by assessing the changes in total PLFA biomass, profiles and specific subgroups. Meadow mesocosms were exposed to slightly elevated O 3  (40\u201350\u00a0ppb) and CO 2  (+100\u00a0ppm) in open-top chambers for three subsequent growing seasons (2002\u20132004). Decreased total, bacterial, actinobacterial, fungal PLFA biomass values as well as fungal:bacterial PLFA biomass ratio were measured after three growing seasons of fumigations with elevated O 3 . There were significant differences in the relative proportions of individual PLFAs between the control and elevated O 3  treatments. Moreover, enhanced O 3  alone and in combination with CO 2  modified the structure of the microbial community. The effects of elevated CO 2  given alone on PLFA profiles were negligible. Our results show that elevated O 3  alone and in combination with CO 2  even at moderate levels may cause changes in the biomass and composition of the microbial community in meadow soils, which may lead to functional changes in soil ecosystem processes.", "keywords": ["hiilidioksidi", "biomassa", "niityt", "soil", "open-top chambers", "ekosysteemit", "kohotettu O3", "otsoni", "microorganisms", "2. Zero hunger", "maaper\u00e4", "elevated CO2", "biomass", "carbon dioxide", "04 agricultural and veterinary sciences", "15. Life on land", "ozone", "kohotettu CO2", "elevated O3", "mikro-organismit", "PLFA", "0401 agriculture", " forestry", " and fisheries", "Ka", "microbial community", "ecosystems", "meadows"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2008.06.007"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2008.06.007", "name": "item", "description": "10.1016/j.soilbio.2008.06.007", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2008.06.007"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-10-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2014.09.012", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:55Z", "type": "Journal Article", "created": "2014-09-30", "title": "Nitrogen And Phosphorus Constrain Labile And Stable Carbon Turnover In Lowland Tropical Forest Soils", "description": "Tropical forests contain a large stock of soil carbon, but the factors that constrain its mineralization remain poorly understood. Microorganisms, when stimulated by the presence of new inputs of labile organic carbon, can mineralize (\u2018prime\u2019) soil organic matter to acquire nutrients. We used stable carbon isotopes to assess how nutrient demand and soil properties constrain mineralization of added labile (sucrose) carbon and pre-existing (primed) soil carbon in tropical forest soils. In a series of lowland tropical forest soils from Panama, we found that the mineralization of fresh labile carbon was accelerated foremost by phosphorus addition, whereas the mineralization of pre-existing soil carbon was constrained foremost by nitrogen addition. However, there was variation in the relative importance of these nutrients in different soils and the largest effects on the acceleration of sucrose metabolism and constraint of priming occurred following the addition of nitrogen and phosphorus together. The respiration responses due to sucrose or primed soil carbon mineralization were reduced at pH below 4.8 and above 6.0. We conclude that in these tropical forest soils, phosphorus availability is more important in promoting microbial mineralization of sucrose carbon, whereas nitrogen availability is more important in constraining the priming of pre-existing soil organic carbon. This response likely arises because nitrogen is more closely coupled to organic matter cycling, whereas phosphorus is abundant in both organic and inorganic forms. These results suggest that the greatest impact of priming on soil carbon stocks will occur in moderately acidic tropical forest soils of low nitrogen availability. Given long-term changes in both atmospheric carbon dioxide and nitrogen deposition, the impact of priming effects on soil carbon in tropical forest soils may be partially constrained by the abundance of nitrogen.", "keywords": ["2. Zero hunger", "tropical", "carbon dioxide", "stable isotopes", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "nitrogen", "carbon isotopes", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "priming effects", "phosphorus", "priming", "microorganisms", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2014.09.012"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2014.09.012", "name": "item", "description": "10.1016/j.soilbio.2014.09.012", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2014.09.012"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-01-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2021.108357", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:58Z", "type": "Journal Article", "created": "2021-07-10", "title": "A critical perspective on interpreting amplicon sequencing data in soil ecological research", "description": "Abstract   Microbial community analysis via marker gene amplicon sequencing has become a routine method in the field of soil research. In this perspective, we discuss technical challenges and limitations of amplicon sequencing and present statistical and experimental approaches that can help addressing the spatio-temporal complexity of soil and the high diversity of organisms therein. We illustrate the impact of compositionality on the interpretation of relative abundance data and discuss effects of sample replication on the statistical power in soil community analysis. Additionally, we argue for the need of increased study reproducibility and data availability, as well as complementary techniques for generating deeper ecological insights into microbial roles and our understanding thereof in soil ecosystems. At this stage, we call upon researchers and specialized soil journals to consider the current state of data analysis, interpretation, and availability to improve the rigor of future studies.", "keywords": ["2. Zero hunger", "0301 basic medicine", "Soil microbial diversity", "0303 health sciences", "Soil metabarcoding", "DIVERSITY", "Ecology; Soil microbes; Amplicon sequencing", "Compositional data", "SCALE SPATIAL HETEROGENEITY", "15. Life on land", "BIOMASS", "03 medical and health sciences", "106026 \u00d6kosystemforschung", "Soil complexity", "CARBON-USE EFFICIENCY", "BACTERIA", "DNA EXTRACTION", "MICROORGANISMS", "MICROBIAL COMMUNITIES", "106026 Ecosystem research", "RIBOSOMAL-RNA", "Amplicon sequencing", "Soil microorganisms", "GENERATION"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2021.108357"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2021.108357", "name": "item", "description": "10.1016/j.soilbio.2021.108357", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2021.108357"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-01T00:00:00Z"}}, {"id": "10.1016/j.ultsonch.2019.05.009", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:17:12Z", "type": "Journal Article", "created": "2019-05-09", "title": "Effects of cavitation on different microorganisms: The current understanding of the mechanisms taking place behind the phenomenon. A review and proposals for further research", "description": "A sudden decrease in pressure triggers the formation of vapour and gas bubbles inside a liquid medium (also called cavitation). This leads to many (key) engineering problems: material loss, noise, and vibration of hydraulic machinery. On the other hand, cavitation is a potentially useful phenomenon: the extreme conditions are increasingly used for a wide variety of applications such as surface cleaning, enhanced chemistry, and wastewater treatment (bacteria eradication and virus inactivation). Despite this significant progress, a large gap persists between the understanding of the mechanisms that contribute to the effects of cavitation and its application. Although engineers are already commercializing devices that employ cavitation, we are still not able to answer the fundamental question: What precisely are the mechanisms how bubbles can clean, disinfect, kill bacteria and enhance chemical activity? The present paper is a thorough review of the recent (from 2005 onward) work done in the fields of cavitation-assisted microorganism's destruction and aims to serve as a foundation to build on in the next years.", "keywords": ["Bacteria", "Fungi", "cavitation", " microorganisms", " destruction", " mechanisms", " reviews", "04 agricultural and veterinary sciences", "6. Clean water", "Disinfection", "Physical Phenomena", "Sonication", "kavitacija", " mikroorganizmi", " mehanizmi", " razgradnja", "0404 agricultural biotechnology", "13. Climate action", "info:eu-repo/classification/udc/532", "Viruses", "0405 other agricultural sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.ultsonch.2019.05.009"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ultrasonics%20Sonochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ultsonch.2019.05.009", "name": "item", "description": "10.1016/j.ultsonch.2019.05.009", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ultsonch.2019.05.009"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-10-01T00:00:00Z"}}, {"id": "21.15107/rcub_nardus_23157", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:25:23Z", "type": "Report", "title": "Optimization of the method for Loop-mediated isothermal amplification (LAMP) of nucleic acids for field detection of food- and waterborne pathogens", "description": "The UN Food and Agriculture Organization (FAO) estimates that by 2050 there will be close to 10 billion people on Earth. The major global challenge is how to provide enough food for everyone, that is safe, ample and produced in a sustainable way. In regard to food safety, large-scale epidemics of foodborne diseases are a persistent threat to public health, as the number of food- and waterborne diseases significantly increases year by year, resulting in the on-going global public health issue. Foodand waterborne microbiological pathogens can be found in a variety of foodstuffs, and their early detection is extremely important to increase overall food safety, and to prevent enormous economic losses. The problems with health-unsafe food in the last 20 years, and a related rise in food poisoning cases internationally, have led to a growing and urgent demand for safe food products that will not pose a danger to consumers. On the other hand, it is equally important to ensure the absence of microbiological pathogens in the whole process of food production e.g. during crop cultivation where it is very important to perform early detection of pathogens to prevent their further spread and avoid the negative effects on yield and quality of crops or during food processing and storage. Classical microbiological cultivation methods are still considered the 'gold standard' in detection of different types of pathogens (bacteria, viruses, pathogenic fungi) during quality analysis, due to their sensitivity, relative low cost and ability to generate qualitative and quantitative information regarding the number and nature of microorganisms of a different origin. However, what is considered perhaps the biggest drawback of these methods is the fact that they require at least 3-4 days to get the first results, and even up to 7 days for confirmatory results. In addition, there are pathogens that cannot be cultivated i.e., so-called viable but non-culturable - VBNC pathogens that do not have the ability to form visible colonies, which further hinders the ability to use classical microbiological cultivation methods for their detection. Application of polymerase chain reaction, i.e. PCR, changed the way microbiological analyses are performed in the direction of detecting specific microbial DNA as a target. PCR-based methods that detect pathogen-derived nucleic acids are faster (last up to several hours), very reliable and allow the analysis of VBNC pathogens. However, these techniques depend on precise instruments, clean working conditions and hence, cannot be used in the field. In addition, PCR can give falsepositive or false-negative results due to the use of nonspecific primers or to the lack of differentiation between nucleic acids of the living (active) and dead (inactive) cells. To address these challenges, the primary focus of this doctoral dissertation is on development and optimization of innovative nucleic acid based methods for rapid detection of pathogens in food and water. More specifically, the research focus of the dissertation is the application of the isothermal loop-mediated amplification (LAMP) method, which allows for fast, simple, and reliable field detection. This approach for detection of pathogens in food of animal and plant origin and in the environment corresponds to the \u201cOne health\u201d paradigm, recommended by the FAO, that is encompassing methods of optimizing the health and well-being of people, animals, plants and environment. In line with this, the primary objectives (O) of this doctoral dissertation have been formulated as follows: O1) To perform advanced development of the LAMP method for research and potential practical purposes in order to detect pathogens in different complex matrices comprising foodstuffs (meat and vegetable), water, and soil-like matrix; O2) to determine applicability of the LAMP method for river water quality assessment as advised by the One health paradigm; O3) to improve and optimize procedures for nucleic acid (NA) isolation in order to enable rapid extraction in the field conditions and O4) comparison of the efficiency of the developed LAMP protocols versus both the conventional cultivation methods and the PCR method as the \u201cgold standard\u201d for NA amplification-based analyses. O1 formulated in the above described way comprises O1.1) establishing clearly defined protocols for LAMP detection of bacterial pathogens in various food matrices using Klebsiella aerogenes species as a model system; The protocol development includes de novo design of the specific primers, and O1.2) developing LAMP protocol for early detection of pathogenic fungi Trichoderma spp. in soil-like matrix. The protocol development includes de novo design of the specific primers. Final protocol includes implementation of colorimetric detection of the LAMP products using gold nanoparticles, thereby increasing the technology readiness level (TRL) for real-life application of the developed protocol. O2 focuses on evaluating the potential application of the LAMP method in detecting fecal indicator bacteria (FIB), such as E. coli, for river water quality assessment. O3 deals with enhancing extraction protocols for rapid DNA isolation O3.1.1) from the foodstuffs and O3.1.2) from soil-like real-life samples (Chelex 100 method) and O3.2) from highly contaminated river water samples (a syringe-based DNA isolation method) and provides evaluation of developed protocols for application in the field conditions. O4 aims to provide conclusions on the applicability of developed LAMP protocols for use in early detection of pathogens of bacterial and fungal origin, in field conditions. The key conclusions derived from the research conducted in this dissertation are that the LAMP method has been successfully optimized for the specific detection of K. aerogenes and Trichoderma spp. in various types of real-life samples. Additionally, the LAMP protocol development included design of novel LAMP primers for both K. aerogenes and Trichoderma spp. as the primer sequences for these pathogens were not found in the literature. The developed LAMP procedures using novel primers are characterized by high sensitivity and low detection limits for all tested samples, as well as with better efficiency compared to the PCR method. These aspects confirm the significant potential of the LAMP method as a diagnostic tool for pathogen detection. Additionally, the field application of the LAMP method combined with the Chelex 100 method for DNA isolation enables practical use of the developed LAMP protocols under various conditions. Furthermore, the results demonstrated that the LAMP method can also be used for detecting E. coli in complex samples such as highly contaminated water, positioning the LAMP method as a very good tool for application following the One Health approach. Notably, the protocols for both LAMP and DNA extraction procedures developed within this thesis still require further increase in TRL before commercial field applications. Taking all of the above into account, this dissertation represents a significant contribution to the research on molecular detection methods and development of innovative diagnostic tools for enhancing food and water safety, that can be of significant importance in addressing the global challenge of ensuring safe food and sustainable environment for the growing population. Further research and application of these methods may greatly contribute to food poisoning prevention, public health and environmental management, as defined in the \u201cOne health\u201d agenda.", "keywords": ["LAMP; isothermal method; nucleic acids; detection of pathogenic microorganisms; food safety; food security; field detection"]}, "links": [{"href": "https://doi.org/21.15107/rcub_nardus_23157"}, {"rel": "self", "type": "application/geo+json", "title": "21.15107/rcub_nardus_23157", "name": "item", "description": "21.15107/rcub_nardus_23157", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/21.15107/rcub_nardus_23157"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-28T00:00:00Z"}}, {"id": "10.1071/sr21268", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:17:59Z", "type": "Journal Article", "created": "2022-01-18", "title": "Lessons from a landmark 1991 article on soil structure: distinct precedence of non-destructive assessment and benefits of fresh perspectives in soil research", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>In 1991, at the launch of a national symposium devoted to soil structure, the Australian Society of Soil Science invited Professor John Letey to deliver a keynote address, which was later published in the society\u2019s journal. In his lecture, he shared the outcome of his reflexion about what the assessment of soil structure should amount to, in order to produce useful insight into the functioning of soils. His viewpoint was that the focus should be put on the openings present in the structure, rather than on the chunks of material resulting from its mechanical dismantlement. In the present article, we provide some historical background for Letey\u2019s analysis, and try to explain why it took a number of years for the paradigm shift that he advocated to begin to occur. Over the last decade, his perspective that soil structure needs to be characterised via non-destructive methods appears to have gained significant momentum, which is likely to increase further in the near future, as we take advantage of recent technological advances. Other valuable lessons that one can derive from Letey\u2019s pioneering article relate to the extreme value for everyone, even neophytes, to constantly ask questions about where research on given topics is heading, what its goals are, and whether the methods that are used at a certain time are optimal.</p></article>", "keywords": ["570", "soil image analysis", "soil microorganisms", "[SDE.MCG]Environmental Sciences/Global Changes", "Soil measuring", "earthworms", "micromorphology", "Aggregate stability", "Soil functions", "01 natural sciences", "630", "Soil fauna", "soil organic matter", "Earthworms", "Micromorphology", "Computed tomography", "aggregate stability", "0105 earth and related environmental sciences", "soil measuring", "2. Zero hunger", "Soil organic matter", "computed tomography", "04 agricultural and veterinary sciences", "soil functions", "15. Life on land", "[SDE.MCG] Environmental Sciences/Global Changes", "Soil image analysis", "0401 agriculture", " forestry", " and fisheries", "soil fauna", "earthworms; micromorphology", "Soil microorganisms"]}, "links": [{"href": "https://doi.org/10.1071/sr21268"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1071/sr21268", "name": "item", "description": "10.1071/sr21268", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1071/sr21268"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-19T00:00:00Z"}}, {"id": "10.1029/2003gb002137", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:17:29Z", "type": "Journal Article", "created": "2004-01-25", "title": "Soil Microbial Activity And N Availability With Elevated Co2in Mojave Desert Soils", "description": "<p>We examined the effects of elevated CO2 on soil nitrogen (N) dynamics in the Mojave Desert by measuring plant N isotope composition (\uffce\uffb415N), soil microbial biomass N, soil respiration, resin\uffe2\uff80\uff90available N, and C and N dynamics during soil incubations. With elevated CO2, foliage of Larrea tridentata and Krameria erecta had mean \uffce\uffb415N 2.1 and 1.1\uffe2\uff80\uffb0 higher with elevated CO2, respectively, and elevated CO2 increased microbial biomass N in dry soils under a perennial grass (6.8 \uffc2\uffb1 1.4 versus 3.7 \uffc2\uffb1 0.3 \uffce\uffbcg/g). Elevated CO2 significantly increased cumulative resin\uffe2\uff80\uff90available N in the field by 12%, driven by available soil moisture. Rates of soil respiration with elevated CO2 were sporadically higher under Pleuraphis and Larrea. Soils under shrubs had greater potential net N mineralization (102.6 \uffc2\uffb1 24.2 \uffce\uffbcg/g) than soils under grasses and in plant interspaces (40.0 \uffc2\uffb1 9.69 \uffce\uffbcg/g). Rates of recalcitrant N turnover in soil incubations were related to soil substrate availability. Results indicate that shifts in soil microbial structure and/or activity may occur with elevated CO2 and may result in increases in plant\uffe2\uff80\uff90available N when soil moisture is available.</p>", "keywords": ["2. Zero hunger", "0106 biological sciences", "elevated CO2", "570", "soil microorganisms", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "630"]}, "links": [{"href": "https://doi.org/10.1029/2003gb002137"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Biogeochemical%20Cycles", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1029/2003gb002137", "name": "item", "description": "10.1029/2003gb002137", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1029/2003gb002137"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-01-24T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2010.02196.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:48Z", "type": "Journal Article", "created": "2010-02-05", "title": "Nitrogen Deposition, Vegetation Burning And Climate Warming Act Independently On Microbial Community Structure And Enzyme Activity Associated With Decomposing Litter In Low-Alpine Heath", "description": "Abstract<p>Low\uffe2\uff80\uff90alpine heathlands are thought to be particularly sensitive to nitrogen (N) deposition, climate and land management change, yet little is known about how these factors regulate key belowground processes, like litter turnover, under field conditions. Here we use an in situ factorial field experiment to test the effects of increased atmospheric N deposition, climate manipulation and past vegetation burning, and their interactions, on litter decomposition and the activity and diversity of associated microorganisms. The use of litter from within (native) and outwith (standard) the experimental plots also enabled us to test whether decomposition and microbial functional diversity is driven primarily by soil conditions or litter chemistry. In general, extracellular enzyme activities of litter were driven by additions of simulated N deposition with phosphatase being the most responsive. We found that standard litter incubated in plots that had been burnt 8 years previously decomposed slower and lost less N and phosphorus than in unburnt plots. This material also had associated with it the greatest activity of glucosidase and the least diverse microbial community, as assessed by culture\uffe2\uff80\uff90independent methods. Although all treatments significantly affected microbial diversity, burning explained most of the variability, indicating a close coupling between plant and microbial communities in these treatments. A striking feature of all the data relating to both standard and native litter was an almost complete lack of interactive effects between the treatments. The lack of interactions between the treatments indicates that each perturbation might affect different mechanisms in the decomposition process (including the composition of associated microbial communities) and nutrient cycling.</p>", "keywords": ["climate change", "enzyme activities", "soil microorganisms", "soil bacteria", "13. Climate action", "microbial diversity", "soil fungi", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "carbon turnover", "15. Life on land"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2010.02196.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2010.02196.x", "name": "item", "description": "10.1111/j.1365-2486.2010.02196.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2010.02196.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-02-05T00:00:00Z"}}, {"id": "10.1186/s40793-022-00407-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:19Z", "type": "Journal Article", "created": "2022-04-01", "title": "Rhizosheath\u2013root system changes exopolysaccharide content but stabilizes bacterial community across contrasting seasons in a desert environment", "description": "Abstract                 Background                 <p>In hot deserts daily/seasonal fluctuations pose great challenges to the resident organisms. However, these extreme ecosystems host unique microenvironments, such as the rhizosheath\uffe2\uff80\uff93root system of desert speargrasses in which biological activities and interactions are facilitated by milder conditions and reduced fluctuations. Here, we examined the bacterial microbiota associated with this structure and its surrounding sand in the desert speargrass Stipagrostis pungens under the contrasting environmental conditions of summer and winter in the Sahara Desert.</p>                                Results                 <p>The belowground rhizosheath\uffe2\uff80\uff93root system has higher nutrient and humidity contents, and cooler temperatures than the surrounding sand. The plant responds to the harsh environmental conditions of the summer by increasing the abundance and diversity of extracellular polymeric substances (EPS) compared to the winter. On the contrary, the bacterial community associated with the rhizosheath\uffe2\uff80\uff93root system and its interactome remain stable and, unlike the bulk sand, are unaffected by the seasonal environmental variations. The rhizosheath\uffe2\uff80\uff93root system bacterial communities are consistently dominated by Actinobacteria and Alphaproteobacteria and form distinct bacteria communities from those of bulk sand in the two seasons. The microbiome-stabilization mediated by the plant host acts to consistently retain beneficial bacteria with multiple plant growth promoting functions, including those capable to produce EPS, which increase the sand water holding capacity ameliorating the rhizosheath micro-environment.</p>                                Conclusions                 <p>Our results reveal the capability of plants in desert ecosystems to stabilize their below ground microbial community under seasonal contrasting environmental conditions, minimizing the heterogeneity of the surrounding bulk sand and contributing to the overall holobiont resilience under poly-extreme conditions.</p>", "keywords": ["Desert; Desertification; Environmental fluctuation; Environmentally-independent microbiome; Extracellular polymeric substances (EPS); PGP microorganisms; Plant legacy; Plant-microbiome; Rhizosheath", "Plant legacy", "0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Environmentally-independent microbiome", "15. Life on land", "Rhizosheath", "Microbiology", "QR1-502", "Environmental fluctuation", "Environmental sciences", "Plant-microbiome", "03 medical and health sciences", "PGP microorganisms", "13. Climate action", "Desert; Desertification; Environmental fluctuation; Environmentally-independent microbiome; Extracellular polymeric substances (EPS); PGP microorganisms; Plant legacy; Plant-microbiome; Rhizosheath;", "Extracellular polymeric substances (EPS)", "GE1-350", "Desert", "Desertification", "Research Article"]}, "links": [{"href": "https://air.unimi.it/bitstream/2434/921619/2/Marasco%20et%20al.%202022_Rhizosheat%20bact%20comm_EnvMicrobiome.pdf"}, {"href": "https://iris.unive.it/bitstream/10278/5089931/1/doi.org%3a10.1186%3as40793-022-00407-3.pdf"}, {"href": "https://arpi.unipi.it/bitstream/11568/1159772/2/Marasco%20et%20al.%20-%202022%20-%20Rhizosheath%e2%80%93root%20system%20changes%20exopolysaccharide%20.pdf"}, {"href": "https://flore.unifi.it/bitstream/2158/1285602/1/Marasco%20et%20al%20Env%20Microbiome%202022.pdf"}, {"href": "https://doi.org/10.1186/s40793-022-00407-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Microbiome", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1186/s40793-022-00407-3", "name": "item", "description": "10.1186/s40793-022-00407-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1186/s40793-022-00407-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-04-01T00:00:00Z"}}, {"id": "10.1126/sciadv.aar3599", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:06Z", "type": "Journal Article", "created": "2018-09-12", "title": "Nitrogen isotope signature evidences ammonium deprotonation as a common transport mechanism for the AMT-Mep-Rh protein superfamily", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Natural nitrogen isotopic signature reveals deprotonation during ammonium transport across living organisms.</p></article>", "keywords": ["0301 basic medicine", "570", "Potassium Channels", "Saccharomyces cerevisiae Proteins", "Nitrogen", "Ammonium deprotonation", "Saccharomyces cerevisiae", "Biochemistry", "630", "03 medical and health sciences", "Ammonia", "Ammonium Compounds", "Cation Transport Proteins", "Research Articles", "Plant Proteins", "AMT-Mep-Rh membrane proteins", "0303 health sciences", "Ion Transport", "Nitrogen Isotopes", "Arabidopsis Proteins", "Sciences bio-m\u00e9dicales et agricoles", "AMT-Mep-Rh proteins", "Hydrogen-Ion Concentration", "3. Good health", "Ammonium transport", "N isotope fractionation", "PH control", "Potassium", "Microorganisms", " Genetically-Modified", "Nitrogen (N)", "Ammonium"]}, "links": [{"href": "https://dipot.ulb.ac.be/dspace/bitstream/2013/277241/4/doi_260868.pdf"}, {"href": "https://doi.org/10.1126/sciadv.aar3599"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20Advances", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1126/sciadv.aar3599", "name": "item", "description": "10.1126/sciadv.aar3599", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1126/sciadv.aar3599"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-09-07T00:00:00Z"}}, {"id": "10.1128/aem.00033-11", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:08Z", "type": "Journal Article", "created": "2011-04-23", "title": "Association Of Earthworm-Denitrifier Interactions With Increased Emission Of Nitrous Oxide From Soil Mesocosms Amended With Crop Residue", "description": "ABSTRACT           <p>             Earthworm activity is known to increase emissions of nitrous oxide (N             2             O) from arable soils. Earthworm gut, casts, and burrows have exhibited higher denitrification activities than the bulk soil, implicating priming of denitrifying organisms as a possible mechanism for this effect. Furthermore, the earthworm feeding strategy may drive N             2             O emissions, as it determines access to fresh organic matter for denitrification. Here, we determined whether interactions between earthworm feeding strategy and the soil denitrifier community can predict N             2             O emissions from the soil. We set up a 90-day mesocosm experiment in which             15             N-labeled maize (             Zea mays             L.) was either mixed in or applied on top of the soil in the presence or absence of the epigeic earthworm             Lumbricus rubellus             and/or the endogeic earthworm             Aporrectodea caliginosa             . We measured N             2             O fluxes and tested the bulk soil for denitrification enzyme activity and the abundance of 16S rRNA and denitrifier genes             nirS             and             nosZ             through real-time quantitative PCR. Compared to the control,             L. rubellus             increased denitrification enzyme activity and N             2             O emissions on days 21 and 90 (day 21,             P             = 0.034 and             P             = 0.002, respectively; day 90,             P             = 0.001 and             P             = 0.007, respectively), as well as cumulative N             2             O emissions (76%;             P             = 0.014).             A. caliginosa             activity led to a transient increase of N             2             O emissions on days 8 to 18 of the experiment. Abundance of             nosZ             was significantly increased (100%) on day 90 in the treatment mixture containing             L. rubellus             alone. We conclude that             L. rubellus             increased cumulative N             2             O emissions by affecting denitrifier community activity via incorporation of fresh residue into the soil and supplying a steady, labile carbon source.           </p>", "keywords": ["2. Zero hunger", "agricultural soil", "Bacteria", "nosz genes", "carbon", "Nitrous Oxide", "n2o emission", "n2o-producing microorganisms", "04 agricultural and veterinary sciences", "15. Life on land", "pcr data", "microbial activity", "Animal Feed", "Zea mays", "lumbricus-rubellus", "Soil", "Denitrification", "Animals", "0401 agriculture", " forestry", " and fisheries", "community composition", "Oligochaeta", "organic-matter"]}, "links": [{"href": "https://doi.org/10.1128/aem.00033-11"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20and%20Environmental%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1128/aem.00033-11", "name": "item", "description": "10.1128/aem.00033-11", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1128/aem.00033-11"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-06-15T00:00:00Z"}}, {"id": "10.1128/aem.69.3.1800-1809.2003", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:08Z", "type": "Journal Article", "created": "2003-03-06", "title": "Soil Type Is The Primary Determinant Of The Composition Of The Total And Active Bacterial Communities In Arable Soils", "description": "ABSTRACT           <p>Degradation of agricultural land and the resulting loss of soil biodiversity and productivity are of great concern. Land-use management practices can be used to ameliorate such degradation. The soil bacterial communities at three separate arable farms in eastern England, with different farm management practices, were investigated by using a polyphasic approach combining traditional soil analyses, physiological analysis, and nucleic acid profiling. Organic farming did not necessarily result in elevated organic matter levels; instead, a strong association with increased nitrate availability was apparent. Ordination of the physiological (BIOLOG) data separated the soil bacterial communities into two clusters, determined by soil type. Denaturing gradient gel electrophoresis and terminal restriction fragment length polymorphism analyses of 16S ribosomal DNA identified three bacterial communities largely on the basis of soil type but with discrimination for pea cropping. Five fields from geographically distinct soils, with different cropping regimens, produced highly similar profiles. The active communities (16S rRNA) were further discriminated by farm location and, to some degree, by land-use practices. The results of this investigation indicated that soil type was the key factor determining bacterial community composition in these arable soils. Leguminous crops on particular soil types had a positive effect upon organic matter levels and resulted in small changes in the active bacterial population. The active population was therefore more indicative of short-term management changes.</p>", "keywords": ["Polymerase Chain Reaction", "geography", "630", "1000 Technology", "Soil", "soil type", "RNA", " Ribosomal", " 16S", "C500 - Microbiology", "genetic polymorphism", "soil analysis", "Bacteria (microorganisms)", "Soil Microbiology", "2. Zero hunger", "article", "Agriculture", "Fabaceae", "Biodiversity", "legume", "04 agricultural and veterinary sciences", "Bacterial Typing Techniques", "microbial community", "Polymorphism", " Restriction Fragment Length", "0605 Microbiology", "Electrophoresis", "16S", "570", "Conservation of Natural Resources", "productivity", "RNA 16S", "soil microorganism", "0600 Biological Sciences", "DNA", " Ribosomal", "0700 Agricultural And Veterinary Sciences", "controlled study", "community composition", "Polymorphism", "Pisum sativum", "Ecosystem", "Ribosomal", "nonhuman", "Bacteria", "bacterial flora", "land use", "DNA", "15. Life on land", "bacterial disease", "Restriction Fragment Length", "C180 - Ecology", "physiology", "RNA", "Soils", "0401 agriculture", " forestry", " and fisheries", "bioavailability"]}, "links": [{"href": "https://doi.org/10.1128/aem.69.3.1800-1809.2003"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20and%20Environmental%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1128/aem.69.3.1800-1809.2003", "name": "item", "description": "10.1128/aem.69.3.1800-1809.2003", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1128/aem.69.3.1800-1809.2003"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2003-03-01T00:00:00Z"}}, {"id": "10.1139/x88-221", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:13Z", "type": "Journal Article", "created": "2007-12-19", "title": "Biomass And Nutrients In Regenerating Woody Vegetation Following Whole-Tree And Conventional Harvest In A Northern Mixed Forest", "description": "<p> Biomass and nutrient contents of regenerating woody plants and litter fall were measured after a northern mixed conifer\uffe2\uff80\uff93hardwood forest was harvested by conventional and whole-tree methods. Before harvest, the central Ontario study site was occupied by a 95-year-old pine (Pinusresinosa, P. strobus) and aspen (Populustremuloides, P. grandidentata) stand growing on gently rolling, gravel-free outwash sands. Four years after harvest, aspen abundance increased 100-fold in both harvested areas, with higher densities after whole-tree harvest (WTH) (4.1\uffe2\uff80\uff82stems/m2) than after conventional harvest (CH) (2.7\uffe2\uff80\uff82stems/m2). No self-thinning of aspen occurred between 2 and 4 years after harvest. Total aboveground woody biomass accumulated at 2.0\uffe2\uff80\uff82t\uffe2\uff80\uffa2ha\uffe2\uff88\uff921\uffe2\uff80\uffa2year\uffe2\uff88\uff921 in the WTH area and 1.5\uffe2\uff80\uff82t\uffe2\uff80\uffa2ha\uffe2\uff88\uff921\uffe2\uff80\uffa2year\uffe2\uff88\uff921 in the CH area; the preharvest rate was 2.0\uffe2\uff80\uff82t\uffe2\uff80\uffa2ha\uffe2\uff88\uff921\uffe2\uff80\uffa2year\uffe2\uff88\uff921. Peak autumn litter production occurred earlier in the harvested areas than in an adjacent uncut area. Cycling of N and K in litter fall returned to preharvest rates after 4 years. Cycling of Ca in litter fall was lower after WTH than after CH. Vegetation uptake of N and K (litter fall plus woody biomass) in the harvested areas in year 4 exceeded the preharvest value. Increased N accumulation in woody biomass (3.0\uffe2\uff80\uff82kg\uffe2\uff80\uffa2ha\uffe2\uff88\uff921\uffe2\uff80\uffa2year\uffe2\uff88\uff921 before harvest, 10.6\uffe2\uff80\uff82kg\uffe2\uff80\uffa2ha\uffe2\uff88\uff921\uffe2\uff80\uffa2year\uffe2\uff88\uff921 after WTH) would place a relatively greater demand on forest floor N pools in the WTH than in the CH area owing to lack of N input in logging slash. Although WTH did not reduce initial rates of biomass production, Populus spp. had lower concentrations of N, Ca, and Mg in the WTH area than in the CH area. There may be a danger that WTH on less fertile sites in the region will produce dense, unproductive aspen stands with low rates of self-thinning. </p>", "keywords": ["0106 biological sciences", "Spermatophyta", "Angiosperms", "Broadleaves", "Forest litter", "Microorganisms", "Coniferopsida: Gymnospermae", "Gymnosperms", "01 natural sciences", "logging", "Dicots", "pines", "nutrients", "Spermatophytes", "Natural regeneration", "Plant nutrition", "Plantae", "Forest Sciences", "Vascular Plants", "biomass", "Stand characteristics", "Salicaceae: Dicotyledones", "thinning", "Soil morphology", "Cycling", "Forestry", "Pinus Resinosa Pinus Strobus Populus Tremuloides Populus Grandidentata Forest Biomass Energy Forest Products", "Plants", "15. Life on land", "Conifers", "Angiospermae", "composition", "whole tree logging", "nutrient reserves", "natural thinning", "measurement", "ecology"], "contacts": [{"organization": "Hendrickson, O.Q.", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1139/x88-221"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Canadian%20Journal%20of%20Forest%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1139/x88-221", "name": "item", "description": "10.1139/x88-221", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1139/x88-221"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1988-11-01T00:00:00Z"}}, {"id": "10.3390/microorganisms9020426", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:57Z", "type": "Journal Article", "created": "2021-02-19", "title": "Identification of Beneficial Microbial Consortia and Bioactive Compounds with Potential as Plant Biostimulants for a Sustainable Agriculture", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>A growing body of evidence demonstrates the potential of various microbes to enhance plant productivity in cropping systems although their successful field application may be impaired by several biotic and abiotic constraints. In the present work, we aimed at developing multifunctional synthetic microbial consortia to be used in combination with suitable bioactive compounds for improving crop yield and quality. Plant growth-promoting microorganisms (PGPMs) with different functional attributes were identified by a bottom-up approach. A comprehensive literature survey on PGPMs associated with maize, wheat, potato and tomato, and on commercial formulations, was conducted by examining peer-reviewed scientific publications and results from relevant European projects. Metagenome fragment recruitments on genomes of potential PGPMs represented in databases were also performed to help identify plant growth-promoting (PGP) strains. Following evidence of their ability to coexist, isolated PGPMs were synthetically assembled into three different microbial consortia. Additionally, the effects of bioactive compounds on the growth of individually PGPMs were tested in starvation conditions. The different combination products based on microbial and non-microbial biostimulants (BS) appear worth considering for greenhouse and open field trials to select those potentially adoptable in sustainable agriculture.</p></article>", "keywords": ["0301 basic medicine", "QH301-705.5", "delivery method", "Plant growth-promoting microorganisms", "SIMBA; sustainable agriculture; plant growth-promoting microorganisms; microbial consortia; metagenome fragment recruitments; delivery methods; in vitro compatibility; bioactive compounds", "630", "Bioactive compounds", "Article", "660.6", "12. Responsible consumption", "03 medical and health sciences", "plant growth-promoting microorganisms", "Delivery methods", "microbial consortia", "plant growth-promoting microorganism", "Biology (General)", "Metagenome fragment recruitments", "bioactive compound", "2. Zero hunger", "0303 health sciences", "bioactive compounds", "660", "in vitro compatibility", "Sustainable agriculture", "metagenome fragment recruitment", "ta4111", "SIMBA", "3. Good health", "sustainable agriculture", "Microbial consortia", "metagenome fragment recruitments", "delivery methods", "In vitro compatibility"]}, "links": [{"href": "http://www.mdpi.com/2076-2607/9/2/426/pdf"}, {"href": "https://www.mdpi.com/2076-2607/9/2/426/pdf"}, {"href": "https://doi.org/10.3390/microorganisms9020426"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Microorganisms", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/microorganisms9020426", "name": "item", "description": "10.3390/microorganisms9020426", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/microorganisms9020426"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-02-19T00:00:00Z"}}, {"id": "10.1590/s1413-70542008000200001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:43Z", "type": "Journal Article", "created": "2008-08-12", "title": "Avalia\u00e7\u00e3o De Indicadores Biol\u00f3gicos De Qualidade Do Solo Sob Sistemas De Cultivo Convencional E Org\u00e2nico De Frutas", "description": "<p>Objetivou-se com este trabalho avaliar os indicadores biol\uffc3\uffb3gicos de qualidade do solo sob sistemas de cultivo convencional e org\uffc3\uffa2nico de frutas no estado do Piau\uffc3\uffad. Amostras de solo foram coletadas na proje\uffc3\uffa7\uffc3\uffa3o da copa das plantas e nas entrelinhas nas profundidades de 0-10, 10-20 e 20-40 cm em duas \uffc3\uffa1reas: sistema org\uffc3\uffa2nico com acerola (SO), sistema convencional com goiaba (SC). Uma \uffc3\uffa1rea adjacente com vegeta\uffc3\uffa7\uffc3\uffa3o nativa (AVN) foi utilizada como referencial, sendo coletadas amostras de solo nas mesmas profundidades em toda \uffc3\uffa1rea. As vari\uffc3\uffa1veis analisadas foram a respira\uffc3\uffa7\uffc3\uffa3o basal, carbono org\uffc3\uffa2nico e microbiano e os quocientes respirat\uffc3\uffb3rio e microbiano do solo. O maior valor de respira\uffc3\uffa7\uffc3\uffa3o basal foi observado no solo do SOcopa, na profundidade de 10-20 cm. Os solos amostrados na \uffc3\uffa1rea de vegeta\uffc3\uffa7\uffc3\uffa3o nativa (AVN) e sob a copa das plantas no sistema de cultivo org\uffc3\uffa2nico (SOcopa) apresentaram teores elevados de Corg na superf\uffc3\uffadcie (0-10 cm) e em profundidade (20-40 cm). Em rela\uffc3\uffa7\uffc3\uffa3o ao solo da AVN, houve aumento no carbono da biomassa microbiana (Cmic), nas profundidades de 0-10 cm e 10-20 cm, para o SOcopa e SCcopa. A ado\uffc3\uffa7\uffc3\uffa3o do sistema org\uffc3\uffa2nico aumentou a atividade microbiana e o conte\uffc3\uffbado de carbono org\uffc3\uffa2nico do solo, mostrando benef\uffc3\uffadcios para esse sistema agr\uffc3\uffadcola.</p>", "keywords": ["Sustainability", "Sustentabilidade", "microrganismos", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "microorganisms", "microbial activity", "atividade microbiana"], "contacts": [{"organization": "Sampaio, Deusiane Batista, Ara\u00fajo, Ademir S\u00e9rgio Ferreira de, Santos, Valdinar Bezerra dos,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1590/s1413-70542008000200001"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ci%C3%AAncia%20e%20Agrotecnologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1590/s1413-70542008000200001", "name": "item", "description": "10.1590/s1413-70542008000200001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1590/s1413-70542008000200001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-04-01T00:00:00Z"}}, {"id": "10.1890/03-5055", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:52Z", "type": "Journal Article", "created": "2007-06-06", "title": "Soil Nitrogen Cycling Under Elevated Co2: A Synthesis Of Forest Face Experiments", "description": "<p>The extent to which greater net primary productivity (NPP) will be sustained as the atmospheric CO2 concentration increases will depend, in part, on the long\uffe2\uff80\uff90term supply of N for plant growth. Over a two\uffe2\uff80\uff90year period, we used common field and laboratory methods to quantify microbial N, gross N mineralization, microbial N immobilization, and specific microbial N immobilization in three free\uffe2\uff80\uff90air CO2 enrichment experiments (Duke Forest, Oak Ridge, Rhinelander). In these experiments, elevated atmospheric CO2 has increased the input of above\uffe2\uff80\uff90 and belowground litter production, which fuels heterotrophic metabolism in soil. Nonetheless, we found no effect of atmospheric CO2 concentration on any microbial N cycling pool or process, indicating that greater litter production had not initially altered the microbial supply of N for plant growth. Thus, we have no evidence that changes in plant litter production under elevated CO2 will initially slow soil N availability and produce a negative feedback on NPP. Understanding the time scale over which greater plant production modifies microbial N demand lies at the heart of our ability to predict long\uffe2\uff80\uff90term changes in soil N availability and hence whether greater NPP will be sustained in a CO2\uffe2\uff80\uff90enriched atmosphere.</p>", "keywords": ["2. Zero hunger", "0106 biological sciences", "elevated CO2", "soil microorganisms", "Science", "Ecology and Evolutionary Biology", "microbial immobilization", "04 agricultural and veterinary sciences", "soil N cycling", "15. Life on land", "01 natural sciences", "6. Clean water", "climate change", "gross N mineralization", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "forest FACE experiments", "Forest Sciences"]}, "links": [{"href": "https://doi.org/10.1890/03-5055"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Applications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1890/03-5055", "name": "item", "description": "10.1890/03-5055", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1890/03-5055"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2003-12-01T00:00:00Z"}}, {"id": "10.3390/fermentation8050225", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:52Z", "type": "Journal Article", "created": "2022-05-14", "title": "Designing a Waste-Based Culture Medium for the Production of Plant Growth Promoting Microorganisms Based on Cladodes Juice from Opuntia ficus-indica Pruning", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>The production of beneficial microorganisms is the first step to obtain a commercial-based product for application in agriculture. In this study, prickly pear (Opuntia ficus-indica) pruning waste was evaluated as a raw material for the production of large amounts of Plant Growth Promoting Microorganisms (PGPMs) reducing the number of generated wastes. Specifically, five PGPMs constituting a synthetic microbial consortium with complementing plant growth-promoting traits were grown on a laboratory scale and, subsequently, on a pilot scale using a 21-L bioreactor. Primarily, the physical-chemical characterization of the culture medium obtained from the juice of Opuntia cladodes was carried out, revealing the presence of sugars and organic acids with different molar ratios. Compared to conventional media, the waste medium did not show significant differences in bacterial growth efficiency. Instead, the survival rates of the bacteria grown in cladodes juice media, after air-drying on zeolite or freeze-drying, were significantly higher than those observed when they were grown in conventional media. The present work is the first conducted on a pilot-scale that maximizes the production of PGPMs in submerged fermentation using cladodes juice from Opuntia, reducing both economic and environmental impacts associated with the generation of wastes.</p></article>", "keywords": ["plant growth promoting microbes;", "biofertilizers", "0301 basic medicine", "TP500-660", "0303 health sciences", "330", "microbial biomass", "<i>Opuntia</i> pruning wastes; cladodes juice; plant growth-promoting microorganisms; biofertilizers; microbial biomass", "Fermentation industries. Beverages. Alcohol", "Opuntia pruning wastes; cladodes juice; plant growth-promoting microorganisms; biofertilizers; microbial biomass", "Opuntia pruning wastes", "6. Clean water", "plant growth promoting microbes", "03 medical and health sciences", "plant growth-promoting microorganisms", "cladodes juice", "<i>Opuntia</i> pruning wastes", "ta414"]}, "links": [{"href": "http://www.mdpi.com/2311-5637/8/5/225/pdf"}, {"href": "https://iris.enea.it/bitstream/20.500.12079/71057/1/Designing%20a%20Waste-Based%20Culture%20Medium%20for%20the%20Production%20of%20Plant%20Growth%20Promoting%20Microorganisms%20Based%20on%20Cladodes%20Juice%20from%20Opuntia%20ficus-indica%20Pruning.pdf"}, {"href": "https://www.mdpi.com/2311-5637/8/5/225/pdf"}, {"href": "https://doi.org/10.3390/fermentation8050225"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Fermentation", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/fermentation8050225", "name": "item", "description": "10.3390/fermentation8050225", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/fermentation8050225"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-14T00:00:00Z"}}, {"id": "10.2307/2640985", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:28Z", "type": "Journal Article", "created": "2006-04-17", "description": "Elevated atmospheric CO2 has the potential to increase the production and alter the chemistry of organic substrates entering soil from plant production, the magnitude of which is constrained by soil-N availability. Because microbial growth in soil is limited by substrate inputs from plant production, we reasoned that changes in the amount and chemistry of these organic substrates could affect the composition of soil microbial com- munities and the cycling of N in soil. We studied microbial community composition and soil-N transformations beneath Populus tremuloides Michx. growing under experimental atmospheric CO2 (35.7 and 70.7 Pa) and soil-N-availability (low N 5 61 ng N\u00b7g 21 \u00b7d 21 and high N 5 319 ng N\u00b7g 21 \u00b7d 21 ) treatments. Atmospheric CO2 concentration was modified in large, open-top chambers, and we altered soil-N availability in open-bottom root boxes by mixing different proportions of A and C horizon material. We used phospholipid fatty-acid analysis to gain insight into microbial community composition and coupled this analysis to measurements of soil-N transformations using 15 N-pool dilution techniques. The infor- mation presented here is part of an integrated experiment designed to elucidate the phys- iological mechanisms controlling the flow of C and N in the plant-soil system. Our ob- jectives were (1) to determine whether changes in plant growth and tissue chemistry alter microbial community composition and soil-N cycling in response to increasing atmospheric CO2 and soil-N availability and (2) to integrate the results of our experiment into a synthesis of elevated atmospheric CO2 and the cycling of C and N in terrestrial ecosystems. After 2.5 growing seasons, microbial biomass, gross N mineralization, microbial im- mobilization, and nitrification (gross and net) were equivalent at ambient and elevated CO2, suggesting that increases in fine-root production and declines in fine-root N concentration were insufficient to alter the influence of native soil organic matter on microbial physiology; this was the case in both low- and high-N soil. Similarly, elevated CO2 did not alter the proportion of bacterial, actinomycetal, or fungal phospholipid fatty acids in low-N or high-N soil, indicating that changes in substrate input from greater plant growth under elevated CO2 did not alter microbial community composition. Our results differ from a substantial number of studies reporting increases and decreases in soil-N cycling under elevated CO 2. From our analysis, it appears that soil-N cycling responds to elevated atmospheric CO 2 in experimental situations where plant roots have fully colonized the soil and root-associated C inputs are sufficient to modify the influence of native soil organic matter on microbial physiology. In young developing ecosystems where plant roots have not fully exploited the soil, microbial metabolism appears to be regulated by relatively large pools of soil organic matter, rather than by the additional input of organic substrates under elevated CO 2.", "keywords": ["measurement-", "soil microorganisms", "Ecology and Evolutionary Biology", "nitrogen-: cycling-", "feedback", "microbial community composition", "techniques-", "Environmental-Sciences)", "01 natural sciences", "litter-plant", "biomass-", "gross and net", "124-38-9: CARBON DIOXIDE", "Spermatophytes-", "cycling-", "soil-organic-matter", "mineralization", "Spermatophyta-", "responses-", "phospholipid-fatty-acids", "2. Zero hunger", "Climatology- (Environmental-Sciences)", "Angiosperms-", "Angiospermae-", "Plants-", "global climate change", "microbial immobilization", "nutrient-", "Soil-Science", "6. Clean water", "metabolism-", "soil-N transformations", "transformation-", "substrates-", "7727-37-9: NITROGEN", "atmosphere-", "elevated atmospheric", "570", "nitrification-", "nitrogen immobilization", "Science", "Vascular-Plants", "poplars-", "phospholipid fatty acids (PFLAs)", "carbon-dioxide", "growth-", "soil-microbial-community-composition", "Salicaceae-: Dicotyledones-", "microbial-flora", "Populus tremuloides", "Plantae-", "organic-matter", "consortia-", "0105 earth and related environmental sciences", "communities-", "ecosystem", "analysis-", "atmospheric CO2 and soil-N availability", "soil-availability", "mineralization-", "carbon dioxide", "fatty-acids", "15. Life on land", "substrate-input", "Populus-tremuloides (Salicaceae-)", "13. Climate action", "roots-", "Terrestrial-Ecology (Ecology-", "composition-", "Dicots-", "immobilization-", "seasons-", "ecosystems-"], "contacts": [{"organization": "Zak, Donald R., Pregitzer, Kurt S., Curtis, Peter S., Holmes, William E.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.2307/2640985"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Applications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2307/2640985", "name": "item", "description": "10.2307/2640985", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2307/2640985"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2000-02-01T00:00:00Z"}}, {"id": "10.3389/fmicb.2018.00703", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:41Z", "type": "Journal Article", "created": "2018-04-30", "title": "Evaluation of Primers Targeting the Diazotroph Functional Gene and Development of NifMAP \u2013 A Bioinformatics Pipeline for Analyzing nifH Amplicon Data", "description": "Diazotrophic microorganisms introduce biologically available nitrogen (N) to the global N cycle through the activity of the nitrogenase enzyme. The genetically conserved dinitrogenase reductase (nifH) gene is phylogenetically distributed across four clusters (I-IV) and is widely used as a marker gene for N2 fixation, permitting investigators to study the genetic diversity of diazotrophs in nature and target potential participants in N2 fixation. To date there have been limited, standardized pipelines for analyzing the nifH functional gene, which is in stark contrast to the 16S rRNA gene. Here we present a bioinformatics pipeline for processing nifH amplicon datasets - NifMAP ('NifH MiSeq Illumina Amplicon Analysis Pipeline'), which as a novel aspect uses Hidden-Markov Models to filter out homologous genes to nifH. By using this pipeline, we evaluated the broadly inclusive primer pairs (Ueda19F-R6, IGK3-DVV, and F2-R6) that target the nifH gene. To evaluate any systematic biases, the nifH gene was amplified with the aforementioned primer pairs in a diverse collection of environmental samples (soils, rhizosphere and roots samples, biological soil crusts and estuarine samples), in addition to a nifH mock community consisting of six phylogenetically diverse members. We noted that all primer pairs co-amplified nifH homologs to varying degrees; up to 90% of the amplicons were nifH homologs with IGK3-DVV in some samples (rhizosphere and roots from tall oat-grass). In regards to specificity, we observed some degree of bias across the primer pairs. For example, primer pair F2-R6 discriminated against cyanobacteria (amongst others), yet captured many sequences from subclusters IIIE and IIIL-N. These aforementioned subclusters were largely missing by the primer pair IGK3-DVV, which also tended to discriminate against Alphaproteobacteria, but amplified sequences within clusters IIIC (affiliated with Clostridia) and clusters IVB and IVC. Primer pair Ueda19F-R6 exhibited the least bias and successfully captured diazotrophs in cluster I and subclusters IIIE, IIIL, IIIM, and IIIN, but tended to discriminate against Firmicutes and subcluster IIIC. Taken together, our newly established bioinformatics pipeline, NifMAP, along with our systematic evaluations of nifH primer pairs permit more robust, high-throughput investigations of diazotrophs in diverse environments.", "keywords": ["0301 basic medicine", "DIVERSITY", "nifH gene", "Microbiology", "03 medical and health sciences", "NifMAP", "Nitrogen fixation", "PARTICULATE METHANE MONOOXYGENASE", "MOLYBDENUM-NITROGENASE", "Primer evaluation", "MICROORGANISMS", "NifH gene", "2. Zero hunger", "106022 Mikrobiologie", "0303 health sciences", "SEQUENCES", "GROUP-IV NITROGENASE", "AMPLIFICATION", "PERFORMANCE", "16. Peace & justice", "QR1-502", "primer evaluation", "nitrogen fixation", "106022 Microbiology", "COMMUNITIES", "N-2 FIXATION", "Illumina amplicon sequencing"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2018.00703"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2018.00703", "name": "item", "description": "10.3389/fmicb.2018.00703", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2018.00703"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-04-30T00:00:00Z"}}, {"id": "10.3389/fmicb.2020.01904", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:42Z", "type": "Journal Article", "created": "2020-08-05", "title": "Field Exploitation of Multiple Functions of Beneficial Microorganisms for Plant Nutrition and Protection: Real Possibility or Just a Hope?", "description": "Bioproducts, i.e., microbial based pesticides or fertilizers (biopesticides and biofertilizers), should be expected to play an ever-increasing role and application in agricultural practices world-wide in the effort to implement policies concerned with sustainable agriculture. However, several microbial strains have proven the capacity to augment plant productivity by enhancing crop nutrition and functioning as biopesticides, or vice-versa. This multifunctionality is an issue that is still not included as a concept and possibility in any legal provision regarding the placing on the market of bioproducts, and indicates difficulties in clearly classifying the purpose of their suitability. In this review, we overview the current understanding of the mechanisms in plant-microbe interactions underlining the dual function of microbial strains toward plant nutrition and protection. The prospects of market development for multifunctional bioproducts are then considered in view of the current regulatory approach in the European Union, in an effort that wants to stimulate a wider adoption of the new knowledge on the role played by microorganisms in crop production.", "keywords": ["biofertilizers", "2. Zero hunger", "0301 basic medicine", "biopesticides", "0303 health sciences", "multifunctional bioproducts", "endophytes", "15. Life on land", "Microbiology", "biofertilizers", " biopesticides", " microbial consortia", " multifunctional bioproducts", " plant growth-promoting microorganisms", " endophytes", "QR1-502", "12. Responsible consumption", "03 medical and health sciences", "plant growth-promoting microorganisms", "microbial consortia"], "contacts": [{"organization": "Kowalska Jolanta, Tyburski J\u00f3zef, Matysiak Kinga, Tylkowski Bartosz, Malus\u00e1 Eligio,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2020.01904"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2020.01904", "name": "item", "description": "10.3389/fmicb.2020.01904", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2020.01904"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-08-05T00:00:00Z"}}, {"id": "10.3389/fmicb.2021.698491", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:42Z", "type": "Journal Article", "created": "2021-09-03", "title": "Current Methods, Common Practices, and Perspectives in Tracking and Monitoring Bioinoculants in Soil", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Microorganisms promised to lead the bio-based revolution for a more sustainable agriculture. Beneficial microorganisms could be a valid alternative to the use of chemical fertilizers or pesticides. However, the increasing use of microbial inoculants is also raising several questions about their efficacy and their effects on the autochthonous soil microorganisms. There are two major issues on the application of bioinoculants to soil: (i) their detection in soil, and the analysis of their persistence and fate; (ii) the monitoring of the impact of the introduced bioinoculant on native soil microbial communities. This review explores the strategies and methods that can be applied to the detection of microbial inoculants and to soil monitoring. The discussion includes a comprehensive critical assessment of the available tools, based on morpho-phenological, molecular, and microscopic analyses. The prospects for future development of protocols for regulatory or commercial purposes are also discussed, underlining the need for a multi-method (polyphasic) approach to ensure the necessary level of discrimination required to track and monitor bioinoculants in soil.</p></article>", "keywords": ["0301 basic medicine", "2. Zero hunger", "biopesticides", "0303 health sciences", "soil", " detection", " microbial inoculants", " bacteria", " fungi", " biofertilisers", " biopesticides", " microorganisms", "detection", "15. Life on land", "Microbiology", "QR1-502", "soil", "12. Responsible consumption", "03 medical and health sciences", "13. Climate action", "biofertilisers", "fungi", "microorganisms", "bacteria", "microbial inoculants"]}, "links": [{"href": "https://iris.cnr.it/bitstream/20.500.14243/453430/1/fmicb-12-698491.pdf"}, {"href": "https://doi.org/10.3389/fmicb.2021.698491"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2021.698491", "name": "item", "description": "10.3389/fmicb.2021.698491", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2021.698491"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-08-31T00:00:00Z"}}, {"id": "10.3389/fpls.2020.01068", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:44Z", "type": "Journal Article", "created": "2020-07-16", "title": "Towards Better Understanding of the Interactions and Efficient Application of Plant Beneficial Prebiotics, Probiotics, Postbiotics and Synbiotics", "description": "Project EXCALIBUR from the European Union's Horizon 2020 research and innovation programme        817946", "keywords": ["0301 basic medicine", "2. Zero hunger", "microbial metabolites", "0303 health sciences", "Microbial metabolites", "plant beneficial microorganisms", "Plant culture", "formulation", "Microbiome management", "Plant beneficial microorganisms", "Plant Science", "microbiome management", "15. Life on land", "6. Clean water", "SB1-1110", "03 medical and health sciences", "Prebiotics", "Formulation", "13. Climate action", "prebiotics"]}, "links": [{"href": "https://doi.org/10.3389/fpls.2020.01068"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fpls.2020.01068", "name": "item", "description": "10.3389/fpls.2020.01068", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fpls.2020.01068"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-07-16T00:00:00Z"}}, {"id": "10.3390/agronomy12040767", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:48Z", "type": "Journal Article", "created": "2022-03-23", "title": "Conception and Development of Recycled Raw Materials (Coconut Fiber and Bagasse)-Based Substrates Enriched with Soil Microorganisms (Arbuscular Mycorrhizal Fungi, Trichoderma spp. and Pseudomonas spp.) for the Soilless Cultivation of Tomato (S. lycopersicum)", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>The global production quantity and the utilisation area harvested for the cultivation of tomatoes have significantly increased in the last three decades. Europe still plays an important role in the production of tomatoes, accounting for 12% of global production in 2020. Tomato production can be divided into greenhouse/soilless production and open field production. Greenhouse/soilless tomato production is mostly developed in northern Europe, and open field production in southern Europe. Soilless cultivation serves to improve control of the growing medium and to avoid any likely problems for watering and maintaining proper nutrient concentrations. Beneficial soil microorganisms, particularly arbuscular mycorrhizal fungi (AMF), are increasingly being recognized as key elements of an agro-ecological approach to agricultural production. The use of these beneficial microorganisms on soilless tomato production may improve plant performance and reduce biotic and abiotic stress occurring during production with a consequent decrease of chemicals and increase of sustainability of the production system. In this paper, we tested different substrates composed of coconut fiber and bagasse (S1 to S4) and beneficial microorganisms (AMF, Pseudomonas fluorescens and Trichoderma harzianum), selecting the most suitable system for the soilless production of tomatoes. Our results showed that substrates S1 (100% coconut fiber) and S2 (66% coconut fiber + 33% bagasse) complementarily used with the consortium of \u201cAMF IP21 + Trichoderma harzianum + Pseudomonas fluorescens IPB04\u201d seem to be the \u201cbest formulation\u201d for this purpose. That confirmed the feasibility of the development of recycled material (coconut fiber and bagasse)-based substrates together with soil microorganisms (AMF and beneficial bacteria) for soilless tomato production.</p></article>", "keywords": ["2. Zero hunger", "0106 biological sciences", "growing substrates", "S", "0401 agriculture", " forestry", " and fisheries", "Agriculture", "04 agricultural and veterinary sciences", "tomato", "15. Life on land", "01 natural sciences", "beneficial soil microorganisms", "tomato; beneficial soil microorganisms; growing substrates", "12. Responsible consumption"], "contacts": [{"organization": "Masquelier, Sylvie, Sozzi, Tommaso, Bouvet, Janie Camille, B\u00e9siers, J\u00e9r\u00f4me, Deogratias, Jean-Marc,", "roles": ["creator"]}]}, "links": [{"href": "http://www.mdpi.com/2073-4395/12/4/767/pdf"}, {"href": "https://www.mdpi.com/2073-4395/12/4/767/pdf"}, {"href": "https://doi.org/10.3390/agronomy12040767"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/agronomy12040767", "name": "item", "description": "10.3390/agronomy12040767", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/agronomy12040767"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-03-23T00:00:00Z"}}, {"id": "10.3390/agriculture11020158", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:46Z", "type": "Journal Article", "created": "2021-02-16", "title": "Trends in Soil Microbial Inoculants Research: A Science Mapping Approach to Unravel Strengths and Weaknesses of Their Application", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Microbial inoculants are widely accepted as potential alternatives or complements to chemical fertilizers and pesticides in agriculture. However, there remains a lack of knowledge regarding their application and effects under field conditions. Thus, a quantitative description of the scientific literature related to soil microbial inoculants was conducted, adopting a science mapping approach to observe trends, strengths, and weaknesses of their application during the period of 2000\u20132020 and providing useful insights for future research. Overall, the study retrieved 682 publications with an increasing number during the 2015\u20132020 period, confirming China, India, and the U.S. as leading countries in microbial inoculants research. Over the last decade, the research field emphasized the use of microbial consortia rather than single strains, with increasing attention paid to sustainability and environmental purposes by means of multidisciplinary approaches. Among the emerging topics, terms such as \u201cpersistence\u201d indicate the actual need for detecting and monitoring the persistence and fate of soil microbial inoculants. On the other hand, the low occurrence of terms related to failed studies as well as formulation processes may have limited the overall comprehension of the real potential of microbial inoculants to date. In conclusion, successful application of soil microbial inoculants in agriculture requires filling the fundamental knowledge gaps related to the processes that govern dynamics and interactions of the inoculants with soil and its native microbiota.</p></article>", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Agriculture (General)", "bibliography", "microbial inoculant detection", "15. Life on land", "soil", "S1-972", "03 medical and health sciences", "bio-inocula", "13. Climate action", "science mapping approach", "biofertilizer", "microorganisms", "microbial inoculants"]}, "links": [{"href": "http://www.mdpi.com/2077-0472/11/2/158/pdf"}, {"href": "https://www.mdpi.com/2077-0472/11/2/158/pdf"}, {"href": "https://doi.org/10.3390/agriculture11020158"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/agriculture11020158", "name": "item", "description": "10.3390/agriculture11020158", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/agriculture11020158"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-02-16T00:00:00Z"}}, {"id": "10.3390/agronomy12040899", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:48Z", "type": "Journal Article", "created": "2022-04-08", "title": "Effects of Multi-Species Microbial Inoculants on Early Wheat Growth and Litterbag Microbial Activity", "description": "<p>The use of microbial consortia (MC) with complementing features is considered to be a promising method of sustainable crop intensification, potentially trumping the limited performance of single-strain applications. We assessed the effect of two novel MC on early wheat growth and litterbag microbial activity in heated and unheated soil. Pot experiments were carried out in duplicate in a greenhouse over 63 days using a completely randomized design with six replications. A range of parameters of plant growth and nutrient uptake were regularly assessed and statistically analyzed by ANOVA. The litterbag-NIRS method was used to trace the microbial activity. Averaged over both trials, soil heating resulted in a significant increase in shoot biomass (+53%) and subsequent nitrogen uptake (+307 mg N pot\uffe2\uff88\uff921) but strongly reduced root development (\uffe2\uff88\uff9246%) compared with unheated soil. The application of MC had no effect on wheat growth in the heated soil. By contrast, in the unheated soil, shoot (+12%) and root (+15%) biomass and shoot nitrogen uptake (+11%) were significantly increased after double inoculation with MC compared with autoclaved MC. The litterbag-NIRS method confirmed clear effects of soil heating on microbial activity. Differences between MC application and the control were noted, indicating a buffering effect of MC.</p>", "keywords": ["2. Zero hunger", "Greenhouse", "S", "Litterbag-NIRS method", "microbial consortia inoculants", "plant-microbe interactions", "Agriculture", "04 agricultural and veterinary sciences", "Microbial consortia inoculants", "Plant-growth-promoting microorganisms", "plant-growth-promoting microorganisms; microbial consortia inoculants; microbial fertilizer; plant-microbe interactions; pot experiments; greenhouse; litterbag-NIRS method", "microbial fertilizer", "Pot experiments", "plant-growth-promoting microorganisms", "greenhouse", "0401 agriculture", " forestry", " and fisheries", "pot experiments", "Plant-microbe interactions", "Microbial fertilizer"]}, "links": [{"href": "http://www.mdpi.com/2073-4395/12/4/899/pdf"}, {"href": "https://iris.enea.it/bitstream/20.500.12079/70987/1/Effects%20of%20Multi-Species%20Microbial%20Inoculants%20on%20Early%20Wheat%20Growth%20and%20Litterbag%20Microbial%20Activity.pdf"}, {"href": "https://www.mdpi.com/2073-4395/12/4/899/pdf"}, {"href": "https://doi.org/10.3390/agronomy12040899"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/agronomy12040899", "name": "item", "description": "10.3390/agronomy12040899", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/agronomy12040899"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-04-08T00:00:00Z"}}, {"id": "10.3390/app14051917", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:49Z", "type": "Journal Article", "created": "2024-02-26", "title": "Effects of Anaerobic Digestates and Biochar Amendments on Soil Health, Greenhouse Gas Emissions, and Microbial Communities: A Mesocosm Study", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>This study addresses the need for a comprehensive understanding of digestate and biochar in mitigating climate change and improving soil health, crucial for sustainable agriculture within the circular bioeconomy framework. Through a mesocosm experiment, soil was amended with digestates from pilot-scale reactors and two concentrations of biochar produced by pyrolysis of digested sewage sludge and waste wood. The Germination Index (GI) assay assessed phytotoxicity on Lactuca sativa and Triticum aestivum seeds. Greenhouse gas emissions (CO2, CH4, N2O) measurements, soil characteristics analyses, and the study of microbial community structure enriched the study\u2019s depth. The GI assay revealed diverse responses among by-products, dilution rates, and plant types, highlighting the potential phyto-stimulatory effects of digestate and biochar water-extracts. While digestate proved to be effective as fertilizer, concerns arose regarding microbial contamination. Biochar application reduced Clostridiaceae presence in soil but unexpectedly increased N2O emissions at higher concentrations, emphasizing the need for further research on biochar\u2019s role in mitigating microbial impacts. CO2 emissions increased with digestate application but decreased with a 10% biochar concentration, aligning with control levels. CH4 uptake decreased with digestate and high biochar concentrations. The study underscores the importance of tailored approaches considering biochar composition and dosage to optimize soil greenhouse gas fluxes and microbial communities.</p></article>", "keywords": ["Technology", "m\u00e4d\u00e4te", "QH301-705.5", "QC1-999", "Clostridiaceae", "ravinteet", "01 natural sciences", "630", "333", "12. Responsible consumption", "greenhouse gas emission", "biochar", "Biology (General)", "microorganisms", "QD1-999", "0105 earth and related environmental sciences", "2. Zero hunger", "biohiili", "soil nutrient", "T", "Physics", "04 agricultural and veterinary sciences", "15. Life on land", "Clostridiae", "Engineering (General). Civil engineering (General)", "6. Clean water", "Chemistry", "kasvihuonekaasut", "13. Climate action", "digestate", "mikro-organismit", "0401 agriculture", " forestry", " and fisheries", "TA1-2040"]}, "links": [{"href": "https://www.mdpi.com/2076-3417/14/5/1917/pdf"}, {"href": "https://doi.org/10.3390/app14051917"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/app14051917", "name": "item", "description": "10.3390/app14051917", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/app14051917"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-02-26T00:00:00Z"}}, {"id": "10.3390/f7050108", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:51Z", "type": "Journal Article", "created": "2016-05-24", "title": "Changes Of Chemical And Biological Properties Of Distinct Forest Floor Layers After Wood Ash Application In A Norway Spruce Stand", "description": "<p>The effect of wood ash (WA) fertilisation on chemical and biological properties of forest floor layers was studied in a Norway spruce (Picea abies (L.) Karst.) stand in the central part of Slovakia at an altitude of 1300 m above sea level. In the forest floor, litter (OL), fragmented (OF), and humic (OH) horizons with average thickness of 1.5, 2, and 4 cm, respectively, could be distinguished. Three replicates of two wood ash treatments (3 and 6 t\uffc2\uffb7ha\uffe2\uff88\uff921) and a control were established in the autumn of 2012. Soil samples from OL, OF, OH and A-horizon were taken 0.5, 1, 6 and 12 months after the WA application. In soil samples chemical (pH, C and N content, C:N ratio, concentration of exchangeable Ca, Mg and K) and microbial properties (basal respiration, catalase activity, structure of microbial community based on BIOLOG assay) were determined. Our results showed that the changes in microbial and chemical properties do not occur simultaneously in particular horizons. WA application in autumn lead to a significant increase in pH, base cation concentration, and distinct losses in C and N content in the OL layer in the first month; however, at the beginning of the vegetation period, the most pronounced effect of WA was observed in OF and especially OH horizons; no changes were found in the A-horizon. Different properties of particular forest floor horizons led to a vertical stratification of the microbial community. Each forest floor horizon had particular properties, leading to a vertical stratification of the microbial community; deeper horizons had more homogenous functional groups.</p>", "keywords": ["13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "14. Life underwater", "15. Life on land", "surface organic layer; fertilisation; soil properties; soil microorganisms"]}, "links": [{"href": "http://www.mdpi.com/1999-4907/7/5/108/pdf"}, {"href": "https://doi.org/10.3390/f7050108"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Forests", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/f7050108", "name": "item", "description": "10.3390/f7050108", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/f7050108"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-05-21T00:00:00Z"}}, {"id": "10.3390/w11020302", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:21:07Z", "type": "Journal Article", "created": "2019-02-12", "title": "Water Quality Changes during Riverbank Filtration in Budapest, Hungary", "description": "<p>The paper gives an overview on the changes in water quality during riverbank filtration (RBF) in Budapest. As water from the Danube River is of high quality, no problems occur during regular operation of RBF systems. Additionally, water quality improved through the past three decades due to the implementation of communal wastewater treatment plants and the decline of extensive use of artificial fertilizers in agriculture. Algae counts are used as tracer indicators to identify input of surface water into wells and to make decisions regarding shutdowns during floods. RBF systems have a high buffering capacity and resistance against accidental spills of contaminants in the river, which was proven during the red mud spill in October 2010. The removal rate of microorganisms was between 1.5 log and 3.5 log efficiency and is in the same order as for other RBF sites worldwide.</p>", "keywords": ["riverbank filtration", "nitrate", "13. Climate action", "organic carbon", "11. Sustainability", "14. Life underwater", "heavy metals", "microorganisms", "water quality", "01 natural sciences", "6. Clean water", "0105 earth and related environmental sciences"]}, "links": [{"href": "http://www.mdpi.com/2073-4441/11/2/302/pdf"}, {"href": "https://doi.org/10.3390/w11020302"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Water", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/w11020302", "name": "item", "description": "10.3390/w11020302", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/w11020302"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-02-11T00:00:00Z"}}, {"id": "10.5281/zenodo.5547311", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:18Z", "type": "Dataset", "title": "Energetic return on investment determines overall soil microbial activity.", "description": "<strong>Data</strong> and <strong>R codes</strong> used for the manuscript entitled ' <strong>Energetic return on investment determines overall soil microbial activity.'</strong>", "keywords": ["organic carbon", "community composition", "microorganisms", "bioenergetics", "microbial activity", "FT-ICR-MS", "calorimetry", "soil"], "contacts": [{"organization": "Dufour, Louis J.P., Herrmann, Anke M., Leloup, Julie, Przybylski, C\ufffd\ufffddric, Foti, Ludovic, Abbadie, Luc, Nunan, Naoise,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.5547311"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.5547311", "name": "item", "description": "10.5281/zenodo.5547311", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.5547311"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.5281/zenodo.6922620", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:25Z", "type": "Report", "title": "Soil microorganisms under changing environment. Changes in soil microbial functional diversity across European field crop farms are mostly driven by environmental variables", "description": "Soil microorganisms under changing environment. Changes in soil microbial functional diversity across European field crop farms are mostly driven by environmental variables This work was funded by the European Commission Horizon 2020 project SoildiverAgro [grant agreement 817819].", "keywords": ["2. Zero hunger", "Soil", "13. Climate action", "15. Life on land", "Microbial function", "Soil microorganisms"], "contacts": [{"organization": "Lloret, Eva", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6922620"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6922620", "name": "item", "description": "10.5281/zenodo.6922620", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6922620"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "10.5281/zenodo.6922621", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:25Z", "type": "Report", "title": "Soil microorganisms under changing environment. Changes in soil microbial functional diversity across European field crop farms are mostly driven by environmental variables", "description": "Soil microorganisms under changing environment. Changes in soil microbial functional diversity across European field crop farms are mostly driven by environmental variables This work was funded by the European Commission Horizon 2020 project SoildiverAgro [grant agreement 817819].", "keywords": ["2. Zero hunger", "Soil", "13. Climate action", "15. Life on land", "Microbial function", "Soil microorganisms"], "contacts": [{"organization": "Lloret, Eva", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6922621"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6922621", "name": "item", "description": "10.5281/zenodo.6922621", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6922621"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "10141/623051", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:24:27Z", "type": "Journal Article", "created": "2021-09-03", "title": "Current Methods, Common Practices, and Perspectives in Tracking and Monitoring Bioinoculants in Soil", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Microorganisms promised to lead the bio-based revolution for a more sustainable agriculture. Beneficial microorganisms could be a valid alternative to the use of chemical fertilizers or pesticides. However, the increasing use of microbial inoculants is also raising several questions about their efficacy and their effects on the autochthonous soil microorganisms. There are two major issues on the application of bioinoculants to soil: (i) their detection in soil, and the analysis of their persistence and fate; (ii) the monitoring of the impact of the introduced bioinoculant on native soil microbial communities. This review explores the strategies and methods that can be applied to the detection of microbial inoculants and to soil monitoring. The discussion includes a comprehensive critical assessment of the available tools, based on morpho-phenological, molecular, and microscopic analyses. The prospects for future development of protocols for regulatory or commercial purposes are also discussed, underlining the need for a multi-method (polyphasic) approach to ensure the necessary level of discrimination required to track and monitor bioinoculants in soil.</p></article>", "keywords": ["0301 basic medicine", "2. Zero hunger", "biopesticides", "0303 health sciences", "detection", "15. Life on land", "Microbiology", "QR1-502", "soil", "12. Responsible consumption", "03 medical and health sciences", "13. Climate action", "biofertilisers", "fungi", "microorganisms", "bacteria", "microbial inoculants"]}, "links": [{"href": "https://iris.cnr.it/bitstream/20.500.14243/453430/1/fmicb-12-698491.pdf"}, {"href": "https://doi.org/10141/623051"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10141/623051", "name": "item", "description": "10141/623051", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10141/623051"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-08-31T00:00:00Z"}}, {"id": "10.5424/sjar/2016142-8395", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:42Z", "type": "Journal Article", "created": "2016-06-01", "description": "<p>Agricultural systems where monoculture prevails are characterized by fertility losses and reduced contribution to ecosystem services. Including cover crops (CC) as part of an agricultural system is a promising choice in sustainable intensification of those demanding systems. We evaluated soil microbial functionality in cash crops in response to the inclusion of CC by analyzing soil microbial functions at two different periods of the agricultural year (cash crop harvest and CC desiccation) during 2013 and 2014. Three plant species were used as CC: oat (Avena sativa L.), vetch (Vicia sativa L.) and radish (Raphanus sativus L.) which were sown in two different mixtures of species: oat and radish mix (CC1) and oat, radish and vetch mix (CC2), with soybean monoculture and soybean/corn being the cash crops. The study of community level physiological profiles showed statistical differences in respiration of specific C sources indicating an improvement of catabolic diversity in CC treatments. Soil enzyme activities were also increased with the inclusion of CC mixtures, with values of dehydrogenase activity and fluorescein diacetate hydrolysis up to 38.1% and 35.3% higher than those of the control treatment, respectively. This research evidenced that CC inclusion promotes soil biological quality through a contribution of soil organic carbon, improving the sustainability of agrosystems. The use of a CC mixture of three plant species including the legume vetch increased soil biological processes and catabolic diversity, with no adverse effects on cash crop grain yield.</p>", "keywords": ["diversification", "Plantas de Cobertura", "Soil Microorganisms", "enzymes", "Agricultural environment and ecology", "microorganisms; soil functionality; sustainability; diversification; enzymes", "SUSTAINABILITY", "https://purl.org/becyt/ford/1.5", "Microorganismos del Suelo", "11. Sustainability", "https://purl.org/becyt/ford/4.1", "MICROORGANISMS", "https://purl.org/becyt/ford/4", "https://purl.org/becyt/ford/1", "microorganisms", "2. Zero hunger", "S", "Agriculture", "Soil Biology", "04 agricultural and veterinary sciences", "15. Life on land", "sustainability", "Sostenibilidad", "Sustainability", "SOIL FUNCTIONALITY", "0401 agriculture", " forestry", " and fisheries", "DIVERSIFICATION", "soil functionality", "ENZYMES", "Biolog\u00eda del Suelo", "Cover Plants"]}, "links": [{"href": "https://doi.org/10.5424/sjar/2016142-8395"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Spanish%20Journal%20of%20Agricultural%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5424/sjar/2016142-8395", "name": "item", "description": "10.5424/sjar/2016142-8395", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5424/sjar/2016142-8395"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-06-01T00:00:00Z"}}, {"id": "20.500.12079/65687", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:25:16Z", "type": "Other", "title": "Identification of beneficial microbial consortia and bioactive compounds with potential as plant biostimulants for a sustainable agriculture", "description": "A growing body of evidence demonstrates the potential of various microbes to enhance plant productivity in cropping systems although their successful field application may be impaired by several biotic and abiotic constraints. In the present work, we aimed at developing multifunctional synthetic microbial consortia to be used in combination with suitable bioactive compounds for improving crop yield and quality. Plant growth-promoting microorganisms (PGPMs) with different functional attributes were identified by a bottom-up approach. A comprehensive literature survey on PGPMs associated with maize, wheat, potato and tomato, and on commercial formulations, was conducted by examining peer-reviewed scientific publications and results from relevant European projects. Metagenome fragment recruitments on genomes of potential PGPMs represented in databases were also performed to help identify plant growth-promoting (PGP) strains. Following evidence of their ability to coexist, isolated PGPMs were synthetically assembled into three different microbial consortia. Additionally, the effects of bioactive compounds on the growth of individually PGPMs were tested in starvation conditions. The different combination products based on microbial and non-microbial biostimulants (BS) appear worth considering for greenhouse and open field trials to select those potentially adoptable in sustainable agriculture.", "keywords": ["Microbial consortia", "Delivery methods", "Sustainable agriculture", "Plant growth-promoting microorganisms", "Metagenome fragment recruitments", "Bioactive compounds", "In vitro compatibility", "SIMBA"], "contacts": [{"organization": "Tabacchioni S., Passato S., Ambrosino P., Huang L., Caldara M., Cantale C., Hett J., Del Fiore A., Fiore A., Schluter A., Sczyrba A., Maestri E., Marmiroli N., Neuhoff D., Nesme J., Sorensen S. J., Aprea G., Nobili C., Presenti O., Giovannetti G., Giovannetti C., Pihlanto A., Brunori A., Bevivino A.,", "roles": ["creator"]}]}, "links": [{"href": "https://iris.enea.it/bitstream/20.500.12079/65687/3/Identification%20of%20Beneficial%20Microbial%20Consortia%20and%20Bioactive%20Compounds%20with%20Potential%20as%20Plant%20Biostimulants%20for%20a%20Sustainable%20Agriculture.pdf"}, {"href": "https://doi.org/20.500.12079/65687"}, {"rel": "self", "type": "application/geo+json", "title": "20.500.12079/65687", "name": "item", "description": "20.500.12079/65687", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/20.500.12079/65687"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.60712/si-id182286.1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:24:07Z", "type": "Dataset", "title": "StrainInfo SI-ID 182286.1", "description": "StrainInfo dataset 182286 about a strain of Monilinia fructicola. StrainInfo is a service developed to provide a resolution of microbial strain identifiers by storing culture collection numbers, their relations, and culture-associated data. StrainInfo is part of NFDI4Microbiota consortium.", "keywords": ["Microbiological Strains", "EUKARYOTA", "Microorganisms--Catalogs and collections", "FOS: Biological sciences", "Microorganisms", "Monilinia fructicola", "Microorganisms--Variation", "Microbiology", "Strain"], "contacts": [{"organization": "Reimer, Lorenz C., Lissin, Artur, Schober, Isabel, Witte, Julius F., Podstawka, Adam, Bunk, Boyke, L\u00fcken, Helko, Overmann, J\u00f6rg,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.60712/si-id182286.1"}, {"rel": "self", "type": "application/geo+json", "title": "10.60712/si-id182286.1", "name": "item", "description": "10.60712/si-id182286.1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.60712/si-id182286.1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-01T00:00:00Z"}}, {"id": "10.60712/si-id148041.2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:24:07Z", "type": "Dataset", "title": "StrainInfo SI-ID 148041.2", "description": "StrainInfo dataset 148041 about a strain of Microsporum audouinii. 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