{"type": "FeatureCollection", "features": [{"id": "10.5281/zenodo.14936177", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:22:43Z", "type": "Dataset", "title": "Precision Liming Soil Datasets (LimeSoDa) Zenodo Repository", "description": "Overview  Precision Liming Soil Datasets (LimeSoDa) is a collection of 31 datasets from a field- and farm-scale soil mapping context. These datasets are 'ready-to-use' for modeling purposes, as they include target soil properties and features in a tidy tabular format. Three target soil properties are present in every dataset: (1) soil organic matter (SOM) or soil organic carbon (SOC), (2) pH, and (3) clay content, while the features for modeling are dataset-specific. The primary goal of `LimeSoDa` is to enable more reliable benchmarking of machine learning methods in digital soil mapping and pedometrics. All the associated materials and data from LimeSoDa can be downloaded in this data repository. However, for a more in-depth analysis, we refer to the published paper 'LimeSoDa: A Dataset Collection for Benchmarking of Machine Learning Regressors in Digital Soil Mapping' by Schmidinger et al. (2025). You may also use our R\u00a0and Python package likewise called LimeSoDa.  \u00a0  Citation  Upon usage of datasets from LimeSoDa, please cite our associated paper:  Schmidinger, J., Vogel, S., Barkov, V., Pham, A.-D., Gebbers, R., Tavakoli, H., Correa, J., Tavares, T.R., Filippi, P., Jones, E. J., Lukas, V., Boenecke, E., Ruehlmann, J., Schroeter, I., Kramer, E., Paetzold, S., Kodaira, M., Wadoux, A.M.J.-C., Bragazza, L., Metzger, K., Huang, J., Valente, D.S.M., Safanelli, J.L., Bottega, E.L., Dalmolin, R.S.D., Farkas, C., Steiger, A., Horst, T. Z., Ramirez-Lopez, L., Scholten, T., Stumpf, F., Rosso, P., Costa, M.M., Zandonadi, R.S., Wetterlind, J. & Atzmueller, M. (2025). LimeSoDa: A Dataset Collection for Benchmarking of Machine Learning Regressors in Digital Soil Mapping.", "keywords": ["Environmental sciences", "Soil Organic Carbon", "Pedometrics", "pH", "Soil Organic Matter", "Clay", "Remote sensing", "Digital Soil Mapping"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.14936177"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.14936177", "name": "item", "description": "10.5281/zenodo.14936177", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.14936177"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-01T00:00:00Z"}}, {"id": "10.3390/agriculture14081298", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:46Z", "type": "Journal Article", "created": "2024-08-06", "title": "Spatial Prediction of Organic Matter Quality in German Agricultural Topsoils", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Soil organic matter (SOM) and the ratio of soil organic carbon to total nitrogen (C/N ratio) are fundamental to the ecosystem services provided by soils. Therefore, understanding the spatial distribution and relationships between the SOM components mineral-associated organic matter (MAOM), particulate organic matter (POM), and C/N ratio is crucial. Three ensemble machine learning models were trained to obtain spatial predictions of the C/N ratio, MAOM, and POM in German agricultural topsoil (0\u201310 cm). Parameter optimization and model evaluation were performed using nested cross-validation. Additionally, a modification to the regressor chain was applied to capture and interpret the interactions among the C/N ratio, MAOM, and POM. The ensemble models yielded mean absolute percent errors (MAPEs) of 8.2% for the C/N ratio, 14.8% for MAOM, and 28.6% for POM. Soil type, pedo-climatic region, hydrological unit, and soilscapes were found to explain 75% of the variance in MAOM and POM, and 50% in the C/N ratio. The modified regressor chain indicated a nonlinear relationship between the C/N ratio and SOM due to the different decomposition rates of SOM as a result of variety in its nutrient quality. These spatial predictions enhance the understanding of soil properties\u2019 distribution in Germany.</p></article>", "keywords": ["2. Zero hunger", "Agriculture (General)", "04 agricultural and veterinary sciences", "15. Life on land", "carbon fraction", "01 natural sciences", "pedometrics", "S1-972", "multi-target prediction", "regressor chain", "digital soil mapping", "0401 agriculture", " forestry", " and fisheries", "agricultural soils", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://www.mdpi.com/2077-0472/14/8/1298/pdf"}, {"href": "https://doi.org/10.3390/agriculture14081298"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/agriculture14081298", "name": "item", "description": "10.3390/agriculture14081298", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/agriculture14081298"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-08-06T00:00:00Z"}}, {"id": "10.5281/zenodo.6574801", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:22Z", "type": "Dataset", "title": "Soil organic carbon content [g/kg] for continental Europe at 30 m spatial resolution for period 2000-2020: Open Soil Data Cube for Europe", "description": "Predictions are based on the 3D Ensemble Machine Learning framework, as implemented in the R environment for statistical computing (Hengl &amp; MacMillan, 2019; Hengl, et al., 2021). For each pixel we provide prediction errors as 1 standard deviation in either log or the original variable scale. The short description of currently available soil properties: log organic carbon [g/kg] to back-transform use exp(x/10)-1; Soil properties were predicted at fixed depths: Surface soil = s0..0cm,<br> Subsoil 1 = s30..30cm,<br> Subsoil 2 = s60..60cm,<br> Subsoil 3 = s100..100cm. To produce estimates for depth intervals e.g. 0\u201330 cm, 0\u2013100 cm best use the trapezoidal rule formula. Periods: 2000 (2000\u20132003), 2004 (2004\u20132007), 2008 (2008\u20132011), 2012 (2012\u20132015), 2016 (2016\u20132019), 2020; To back-transform the log.oc maps use formula: exp(x/10)-1. These are examples of back-transformed values: log.oc = 15 \u2192 0.3% SOC;<br> log.oc = 20 \u2192 0.6% SOC;<br> log.oc = 25 \u2192 1.1% SOC;<br> log.oc = 30 \u2192 1.9% SOC;<br> log.oc = 35 \u2192 3.2% SOC;<br> log.oc = 40 \u2192 5.3% SOC;<br> log.oc = 50 \u2192 14.8% SOC;", "keywords": ["Europe", "soil carbon", "pedometrics"], "contacts": [{"organization": "Hengl, T., Parente, L.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6574801"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6574801", "name": "item", "description": "10.5281/zenodo.6574801", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6574801"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-23T00:00:00Z"}}, {"id": "10.5281/zenodo.6574802", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:22Z", "type": "Dataset", "title": "Soil organic carbon content [g/kg] for continental Europe at 30 m spatial resolution for period 2000-2020: Open Soil Data Cube for Europe", "description": "Predictions are based on the 3D Ensemble Machine Learning framework, as implemented in the R environment for statistical computing (Hengl &amp; MacMillan, 2019; Hengl, et al., 2021). For each pixel we provide prediction errors as 1 standard deviation in either log or the original variable scale. The short description of currently available soil properties: log organic carbon [g/kg] to back-transform use exp(x/10)-1; Soil properties were predicted at fixed depths: Surface soil = s0..0cm,<br> Subsoil 1 = s30..30cm,<br> Subsoil 2 = s60..60cm,<br> Subsoil 3 = s100..100cm. To produce estimates for depth intervals e.g. 0\u201330 cm, 0\u2013100 cm best use the trapezoidal rule formula. Periods: 2000 (2000\u20132003), 2004 (2004\u20132007), 2008 (2008\u20132011), 2012 (2012\u20132015), 2016 (2016\u20132019), 2020; To back-transform the log.oc maps use formula: exp(x/10)-1. These are examples of back-transformed values: log.oc = 15 \u2192 0.3% SOC;<br> log.oc = 20 \u2192 0.6% SOC;<br> log.oc = 25 \u2192 1.1% SOC;<br> log.oc = 30 \u2192 1.9% SOC;<br> log.oc = 35 \u2192 3.2% SOC;<br> log.oc = 40 \u2192 5.3% SOC;<br> log.oc = 50 \u2192 14.8% SOC;", "keywords": ["Europe", "soil carbon", "pedometrics"], "contacts": [{"organization": "Hengl, T., Parente, L.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6574802"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6574802", "name": "item", "description": "10.5281/zenodo.6574802", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6574802"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-23T00:00:00Z"}}, {"id": "10.5281/zenodo.6574816", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:22Z", "type": "Dataset", "title": "Soil clay content [%] for continental Europe at 30 m spatial resolution for period 2000-2020: Open Soil Data Cube for Europe", "description": "Predictions are based on the 3D Ensemble Machine Learning framework, as implemented in the R environment for statistical computing (Hengl &amp; MacMillan, 2019; Hengl, et al., 2021). For each pixel we provide prediction errors as 1 standard deviation in either log or the original variable scale. The short description of currently available soil properties: clay.tot = clay content [percent]; Soil properties were predicted at fixed depths: Surface soil = s0..0cm,<br> Subsoil 1 = s30..30cm,<br> Subsoil 2 = s60..60cm,<br> Subsoil 3 = s100..100cm. To produce estimates for depth intervals e.g. 0\u201330 cm, 0\u2013100 cm best use the trapezoidal rule formula. Periods: 2000 (2000\u20132003), 2004 (2004\u20132007), 2008 (2008\u20132011), 2012 (2012\u20132015), 2016 (2016\u20132019), 2020;", "keywords": ["Europe", "13. Climate action", "clay content", "15. Life on land", "pedometrics"], "contacts": [{"organization": "Hengl, T., Parente, L.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6574816"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6574816", "name": "item", "description": "10.5281/zenodo.6574816", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6574816"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-23T00:00:00Z"}}, {"id": "10.5281/zenodo.6574829", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:22Z", "type": "Dataset", "title": "Soil bulk density [10x kg/m3] for continental Europe at 30 m spatial resolution for period 2000-2020: Open Soil Data Cube for Europe", "description": "Predictions are based on the 3D Ensemble Machine Learning framework, as implemented in the R environment for statistical computing (Hengl &amp; MacMillan, 2019; Hengl, et al., 2021). For each pixel we provide prediction errors as 1 standard deviation in either log or the original variable scale. The short description of currently available soil properties: db_od = bulk density over dry [kg/m3 \u2a09 10]; Soil properties were predicted at fixed depths: Surface soil = s0..0cm,<br> Subsoil 1 = s30..30cm,<br> Subsoil 2 = s60..60cm,<br> Subsoil 3 = s100..100cm. To produce estimates for depth intervals e.g. 0\u201330 cm, 0\u2013100 cm best use the trapezoidal rule formula. Periods: 2000 (2000\u20132003), 2004 (2004\u20132007), 2008 (2008\u20132011), 2012 (2012\u20132015), 2016 (2016\u20132019), 2020; The bulk density maps are also provided in 10 kg / m-cubic to reduce total data size; to convert values to kg / m-cubic multiply by 10 e.g. 120 = 1200 kg / m-cubic = 1.2 t / m-cubic.", "keywords": ["2. Zero hunger", "Europe", "15. Life on land", "pedometrics", "soil bulk density"], "contacts": [{"organization": "Hengl, T., Parente, L.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6574829"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6574829", "name": "item", "description": "10.5281/zenodo.6574829", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6574829"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-23T00:00:00Z"}}, {"id": "10.5281/zenodo.6574843", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:22Z", "type": "Dataset", "title": "Soil pH in H2O [-] for continental Europe at 30 m spatial resolution for period 2000-2020: Open Soil Data Cube for Europe", "description": "Predictions are based on the 3D Ensemble Machine Learning framework, as implemented in the R environment for statistical computing (Hengl &amp; MacMillan, 2019; Hengl, et al., 2021). For each pixel we provide prediction errors as 1 standard deviation in either log or the original variable scale. The short description of currently available soil properties: soil pH in H2O; Soil properties were predicted at fixed depths: Surface soil = s0..0cm,<br> Subsoil 1 = s30..30cm,<br> Subsoil 2 = s60..60cm,<br> Subsoil 3 = s100..100cm. To produce estimates for depth intervals e.g. 0\u201330 cm, 0\u2013100 cm best use the trapezoidal rule formula. Periods: 2000 (2000\u20132003), 2004 (2004\u20132007), 2008 (2008\u20132011), 2012 (2012\u20132015), 2016 (2016\u20132019), 2020;", "keywords": ["Europe", "soil pH", "13. Climate action", "15. Life on land", "pedometrics"], "contacts": [{"organization": "Hengl, T., Parente, L.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6574843"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6574843", "name": "item", "description": "10.5281/zenodo.6574843", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6574843"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-23T00:00:00Z"}}, {"id": "10.5281/zenodo.6574856", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:22Z", "type": "Dataset", "title": "Soil sand content [%] for continental Europe at 30 m spatial resolution for period 2000-2020: Open Soil Data Cube for Europe", "description": "Predictions are based on the 3D Ensemble Machine Learning framework, as implemented in the R environment for statistical computing (Hengl &amp; MacMillan, 2019; Hengl, et al., 2021). For each pixel we provide prediction errors as 1 standard deviation in either log or the original variable scale. The short description of currently available soil properties: sand.tot = sand content [percent]; Soil properties were predicted at fixed depths: Surface soil = s0..0cm,<br> Subsoil 1 = s30..30cm,<br> Subsoil 2 = s60..60cm,<br> Subsoil 3 = s100..100cm. To produce estimates for depth intervals e.g. 0\u201330 cm, 0\u2013100 cm best use the trapezoidal rule formula. Periods: 2000 (2000\u20132003), 2004 (2004\u20132007), 2008 (2008\u20132011), 2012 (2012\u20132015), 2016 (2016\u20132019), 2020;", "keywords": ["Europe", "13. Climate action", "sand content", "pedometrics"], "contacts": [{"organization": "Hengl, T., Parente, L.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6574856"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6574856", "name": "item", "description": "10.5281/zenodo.6574856", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6574856"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-23T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Pedometrics&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Pedometrics&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Pedometrics&", "hreflang": "en-US"}, {"rel": "last", "type": "application/geo+json", "title": "items (last)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Pedometrics&offset=8", "hreflang": "en-US"}], "numberMatched": 8, "numberReturned": 8, "distributedFeatures": [], "timeStamp": "2026-05-26T10:15:19.899667Z"}