{"type": "FeatureCollection", "features": [{"id": "10.1111/1462-2920.13842", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:17:56Z", "type": "Journal Article", "created": "2017-06-27", "title": "Identification and characterisation of isoprene-degrading bacteria in an estuarine environment", "description": "Summary<p>Approximately one\uffe2\uff80\uff90third of volatile organic compounds (VOCs) emitted to the atmosphere consists of isoprene, originating from the terrestrial and marine biosphere, with a profound effect on atmospheric chemistry. However, isoprene provides an abundant and largely unexplored source of carbon and energy for microbes. The potential for isoprene degradation in marine and estuarine samples from the Colne Estuary, UK, was investigated using DNA\uffe2\uff80\uff90Stable Isotope Probing (DNA\uffe2\uff80\uff90SIP). Analysis at two timepoints showed the development of communities dominated by Actinobacteria including members of the genera Mycobacterium, Rhodococcus, Microbacterium and Gordonia. Representative isolates, capable of growth on isoprene as sole carbon and energy source, were obtained from marine and estuarine locations, and isoprene\uffe2\uff80\uff90degrading strains of Gordonia and Mycobacterium were characterised physiologically and their genomes were sequenced. Genes predicted to be required for isoprene metabolism, including four\uffe2\uff80\uff90component isoprene monooxygenases (IsoMO), were identified and compared with previously characterised examples. Transcriptional and activity assays of strains growing on isoprene or alternative carbon sources showed that growth on isoprene is an inducible trait requiring a specific IsoMO. This study is the first to identify active isoprene degraders in estuarine and marine environments using DNA\uffe2\uff80\uff90SIP and to characterise marine isoprene\uffe2\uff80\uff90degrading bacteria at the physiological and molecular level.</p>", "keywords": ["0301 basic medicine", "570", "Volatile Organic Compounds", "0303 health sciences", "550", "Base Sequence", "610", "QR Microbiology", "Sequence Analysis", " DNA", "Environment", "6. Clean water", "Mixed Function Oxygenases", "Mycobacterium", "03 medical and health sciences", "Hemiterpenes", "13. Climate action", "Pentanes", "Butadienes", "Rhodococcus", "14. Life underwater", "Gordonia Bacterium", "Research Articles", "Genome", " Bacterial", "GE Environmental Sciences"]}, "links": [{"href": "https://ueaeprints.uea.ac.uk/id/eprint/63998/4/Published_manuscript.pdf"}, {"href": "http://onlinelibrary.wiley.com/wol1/doi/10.1111/1462-2920.13842/fullpdf"}, {"href": "https://doi.org/10.1111/1462-2920.13842"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/1462-2920.13842", "name": "item", "description": "10.1111/1462-2920.13842", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/1462-2920.13842"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-07-21T00:00:00Z"}}, {"id": "10.1038/s41396-018-0072-6", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:17:16Z", "type": "Journal Article", "created": "2018-02-14", "title": "Microbial cycling of isoprene, the most abundantly produced biological volatile organic compound on Earth", "description": "Abstract<p>Isoprene (2-methyl-1,3-butadiene), the most abundantly produced biogenic volatile organic compound (BVOC) on Earth, is highly reactive and can have diverse and often detrimental atmospheric effects, which impact on climate and health. Most isoprene is produced by terrestrial plants, but (micro)algal production is important in aquatic environments, and the relative bacterial contribution remains unknown. Soils are a sink for isoprene, and bacteria that can use isoprene as a carbon and energy source have been cultivated and also identified using cultivation-independent methods from soils, leaves and coastal/marine environments. Bacteria belonging to the Actinobacteria are most frequently isolated and identified, and Proteobacteria have also been shown to degrade isoprene. In the freshwater-sediment isolate, Rhodococcus strain AD45, initial oxidation of isoprene to 1,2-epoxy-isoprene is catalyzed by a multicomponent isoprene monooxygenase encoded by the genes isoABCDEF. The resultant epoxide is converted to a glutathione conjugate by a glutathione S-transferase encoded by isoI, and further degraded by enzymes encoded by isoGHJ. Genome sequence analysis of actinobacterial isolates belonging to the genera Rhodococcus, Mycobacterium and Gordonia has revealed that isoABCDEF and isoGHIJ are linked in an operon, either on a plasmid or the chromosome. In Rhodococcus strain AD45 both isoprene and epoxy-isoprene induce a high level of transcription of 22 contiguous genes, including isoABCDEF and isoGHIJ. Sequence analysis of the isoA gene, encoding the large subunit of the oxygenase component of isoprene monooxygenase, from isolates has facilitated the development of PCR primers that are proving valuable in investigating the ecology of uncultivated isoprene-degrading bacteria.</p>", "keywords": ["2. Zero hunger", "0301 basic medicine", "570", "0303 health sciences", "550", "QH301 Biology", "Review Article", "Plants", "15. Life on land", "6. Clean water", "Mixed Function Oxygenases", "Actinobacteria", "Soil", "03 medical and health sciences", "Hemiterpenes", "13. Climate action", "Pentanes", "11. Sustainability", "Butadienes", "Microalgae", "Rhodococcus"]}, "links": [{"href": "https://ueaeprints.uea.ac.uk/id/eprint/66436/1/Published_manuscript.pdf"}, {"href": "http://www.nature.com/articles/s41396-018-0072-6.pdf"}, {"href": "https://repository.essex.ac.uk/21526/1/s41396-018-0072-6.pdf"}, {"href": "https://doi.org/10.1038/s41396-018-0072-6"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/The%20ISME%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41396-018-0072-6", "name": "item", "description": "10.1038/s41396-018-0072-6", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41396-018-0072-6"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-02-20T00:00:00Z"}}, {"id": "10.1093/treephys/tps029", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:17:48Z", "type": "Journal Article", "created": "2012-04-13", "title": "Physiological Response To Drought In Radiata Pine: Phytohormone Implication At Leaf Level", "description": "Pinus radiata D. Don is one of the most abundant species in the north of Spain. Knowledge of drought response mechanisms is essential to guarantee plantation survival under reduced water supply as predicted in the future. Tolerance mechanisms are being studied in breeding programs, because information on such mechanisms can be used for genotype selection. In this paper, we analyze the changes of leaf water potential, hydraulic conductance (K(leaf)), stomatal conductance and phytohormones under drought in P. radiata breeds (O1, O2, O3, O4, O5 and O6) from different climatology areas, hypothesizing that they could show variable drought tolerance. As a primary signal, drought decreased cytokinin (zeatin and zeatin riboside-Z\u2009+\u2009ZR) levels in needles parallel to K(leaf) and gas exchange. When Z\u2009+\u2009ZR decreased by 65%, indole-3-acetic acid (IAA) and abscisic acid (ABA) accumulation started as a second signal and increments were higher for IAA than for ABA. When plants decreased by 80%, Z\u2009+\u2009ZR and K(leaf) doubled their ABA and IAA levels, the photosystem II yield decreased and the electrolyte leakage increased. At the end of the drought period, less tolerant breeds increased IAA over 10-fold compared with controls. External damage also induced jasmonic acid accumulation in all breeds except in O5 (P. radiata var. radiata\u2009\u00d7\u2009var. cedrosensis), which accumulated salicylic acid as a defense mechanism. After rewatering, only the most tolerant plants recovered their K(leaf,) perhaps due to an IAA decrease and 1-aminocyclopropane-1-carboxylic acid maintenance. From all phytohormones, IAA was the most representative 'water deficit signal' in P. radiata.", "keywords": ["0301 basic medicine", "2. Zero hunger", "Genotype", "Indoleacetic Acids", "Climate", "Amino Acids", " Cyclic", "Photosystem II Protein Complex", "Cyclopentanes", "Breeding", "15. Life on land", "Pinus", "Adaptation", " Physiological", "6. Clean water", "Droughts", "Plant Leaves", "Electrolytes", "Isopentenyladenosine", "03 medical and health sciences", "Plant Growth Regulators", "Plant Stomata", "Oxylipins", "Photosynthesis", "Salicylic Acid", "Abscisic Acid", "Signal Transduction"]}, "links": [{"href": "https://doi.org/10.1093/treephys/tps029"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Tree%20Physiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/treephys/tps029", "name": "item", "description": "10.1093/treephys/tps029", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/treephys/tps029"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-04-01T00:00:00Z"}}, {"id": "10.1111/1462-2920.16325", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:17:56Z", "type": "Journal Article", "created": "2022-12-26", "title": "Peering down the sink: a review of isoprene metabolism by bacteria", "description": "Abstract<p>Isoprene (2\uffe2\uff80\uff90methyl\uffe2\uff80\uff901,3\uffe2\uff80\uff90butadiene) is emitted to the atmosphere each year in sufficient quantities to rival methane (&gt;500\uffe2\uff80\uff89Tg\uffe2\uff80\uff89C\uffe2\uff80\uff89yr\uffe2\uff88\uff921), primarily due to emission by trees and other plants. Chemical reactions of isoprene with other atmospheric compounds, such as hydroxyl radicals and inorganic nitrogen species (NOx), have implications for global warming and local air quality, respectively. For many years, it has been estimated that soil\uffe2\uff80\uff90dwelling bacteria consume a significant amount of isoprene (~20\uffe2\uff80\uff89Tg\uffe2\uff80\uff89C\uffe2\uff80\uff89yr\uffe2\uff88\uff921), but the mechanisms underlying the biological sink for isoprene have been poorly understood. Studies have indicated or confirmed the ability of diverse bacterial genera to degrade isoprene, whether by the canonical iso\uffe2\uff80\uff90type isoprene degradation pathway or through other less well\uffe2\uff80\uff90characterized mechanisms. Here, we review current knowledge of isoprene metabolism and highlight key areas for further research. In particular, examples of isoprene\uffe2\uff80\uff90degraders that do not utilize the isoprene monooxygenase have been identified in recent years. This has fascinating implications both for the mechanism of isoprene uptake by bacteria, and also for the ecology of isoprene\uffe2\uff80\uff90degraders in the environments.</p>", "keywords": ["0301 basic medicine", "0303 health sciences", "03 medical and health sciences", "Hemiterpenes", "Bacteria", "13. Climate action", "Ecological Microbiology", "Pentanes", "Butadienes", "Plants", "15. Life on land", "6. Clean water"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/1462-2920.16325"}, {"href": "https://doi.org/10.1111/1462-2920.16325"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/1462-2920.16325", "name": "item", "description": "10.1111/1462-2920.16325", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/1462-2920.16325"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-04T00:00:00Z"}}, {"id": "10.1111/j.1438-8677.2012.00582.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:18:11Z", "type": "Journal Article", "created": "2012-04-18", "title": "Lower Incidence And Severity Of Tomato Virus In Elevated Co2 Is Accompanied By Modulated Plant Induced Defence In Tomato", "description": "Abstract<p>Elevation in atmospheric CO2 concentration broadly affects plant phenology and physiology, and these effects may alter the performance of plant viruses. The effects of elevated CO2 on the susceptibility of tomato plants to Tomato yellow leaf curl virus (TYLCV) were examined for two successive years in open top chambers (OTC) in the field. We experimentally tested the hypothesis that elevated CO2 would reduce the incidence and severity of TYLCV on tomato by altering plant defence strategies. Our results showed that elevated CO2 decreased TYLCV disease incidence (by 14.6% in 2009 and 11.8% in 2010) and decreased disease severity (by 20.0% in 2009 and 10.4% in 2010). Elevated CO2 also decreased the level of TYLCV coat protein in tomato leaves. Regardless of virus infection, elevated CO2 increased plant height and aboveground biomass. Additionally, elevated CO2 increased the leaf C:N ratio of tomato, but decreased soluble protein content in leaves. Notably, elevated CO2 increased the salicylic acid (SA) level in uninfected and infected plants. In contrast, elevated CO2 reduced jasmonic acid (JA) in uninfected plants while it increased JA and abscisic acid (ABA) in virus\uffe2\uff80\uff90infected plants. Furthermore, combined exogenous SA and JA application enhanced resistance to TYLCV more than application of either SA or JA alone. Our results suggest that the modulated antagonistic relationship between SA and JA under elevated CO2 makes a great contribution to increased tomato resistance to TYLCV, and the predicted increases in tomato productivity may be enhanced by reduced plant virus susceptibility under projected rising CO2 conditions.</p>", "keywords": ["2. Zero hunger", "0301 basic medicine", "0303 health sciences", "Plant Stems", "Cyclopentanes", "Carbon Dioxide", "3. Good health", "Plant Viruses", "Plant Leaves", "03 medical and health sciences", "Solanum lycopersicum", "Capsid Proteins", "Oxylipins", "Salicylic Acid", "Abscisic Acid", "Disease Resistance", "Plant Diseases"], "contacts": [{"organization": "Yuhan Sun, H. Cao, Feng Ge, L. Huang, L. Ye, Q. Ren,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1111/j.1438-8677.2012.00582.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1438-8677.2012.00582.x", "name": "item", "description": "10.1111/j.1438-8677.2012.00582.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1438-8677.2012.00582.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-04-18T00:00:00Z"}}, {"id": "10.1111/ppl.70252", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:18:20Z", "type": "Journal Article", "created": "2025-04-30", "title": "Differential xylem phytohormone export from dry and wet roots during partial rootzone drying is independent of shoot\u2010to\u2010root transport in soybean", "description": "Abstract<p>Different phytohormones can act as root\uffe2\uff80\uff90to\uffe2\uff80\uff90shoot signalling molecules in response to soil drying. Recent findings suggest that root ABA levels are predominantly leaf\uffe2\uff80\uff90sourced and not locally synthesized, thus, ABA exported from the roots in the xylem is mostly recycled from the shoot. To explain the differential root hormone accumulation observed under partial rootzone drying (PRD) that imposes distinct dry and wet parts of the root zone, we grafted \uffe2\uff80\uff9ctwo\uffe2\uff80\uff90root, one\uffe2\uff80\uff90shoot\uffe2\uff80\uff9d soybean plants to independently assess xylem export of different phytohormones from either part of the root zone. Grafts were subjected to a combination of girdling (either part, all, or none of the rootzone) and irrigation (homogenously well\uffe2\uff80\uff90watered (WW) and PRD). PRD did not increase foliar ABA but decreased stomatal conductance, attributed to decreased leaf water potential and/or increased xylem sap ABA, JA, or ACC concentrations. In contrast, the foliar ABA increments that accompanied girdling\uffe2\uff80\uff90induced stomatal closure were proportional to the root fraction to which phloem transport was interrupted. Irrespective of girdling, root ABA accumulation (and xylem ABA export from) was highest in the dry PRD rootzone, xylem jasmonic acid (JA) in the wet PRD rootzone, and xylem ACC in both rootzones of PRD plants. Thus, soil drying of the dry root zone and transient overwatering of the wet root zone enhanced ACC export in PRD plants. We conclude that root water status during PRD enhances root ABA, JA and ACC synthesis and xylem export, independent of shoot\uffe2\uff80\uff90to\uffe2\uff80\uff90root transport.</p", "keywords": ["Plant Leaves", "Plant Growth Regulators", "Glycine max", "Xylem", "Water", "Biological Transport", "Cyclopentanes", "Oxylipins", "Desiccation", "Plant Roots", "Plant Shoots", "Original Research", "Abscisic Acid"]}, "links": [{"href": "https://doi.org/10.1111/ppl.70252"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Physiologia%20Plantarum", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/ppl.70252", "name": "item", "description": "10.1111/ppl.70252", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/ppl.70252"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-04-29T00:00:00Z"}}, {"id": "10.3390/cells9092026", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:19:37Z", "type": "Journal Article", "created": "2020-09-03", "title": "Chemical Genetics Approach Identifies Abnormal Inflorescence Meristem 1 as a Putative Target of a Novel Sulfonamide That Protects Catalase2-Deficient Arabidopsis against Photorespiratory Stress", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Alterations of hydrogen peroxide (H2O2) levels have a profound impact on numerous signaling cascades orchestrating plant growth, development, and stress signaling, including programmed cell death. To expand the repertoire of known molecular mechanisms implicated in H2O2 signaling, we performed a forward chemical screen to identify small molecules that could alleviate the photorespiratory-induced cell death phenotype of Arabidopsisthaliana mutants lacking H2O2-scavenging capacity by peroxisomal catalase2. Here, we report the characterization of pakerine, an m-sulfamoyl benzamide from the sulfonamide family. Pakerine alleviates the cell death phenotype of cat2 mutants exposed to photorespiration-promoting conditions and delays dark-induced senescence in wild-type Arabidopsis leaves. By using a combination of transcriptomics, metabolomics, and affinity purification, we identified abnormal inflorescence meristem 1 (AIM1) as a putative protein target of pakerine. AIM1 is a 3-hydroxyacyl-CoA dehydrogenase involved in fatty acid \u03b2-oxidation that contributes to jasmonic acid (JA) and salicylic acid (SA) biosynthesis. Whereas intact JA biosynthesis was not required for pakerine bioactivity, our results point toward a role for \u03b2-oxidation-dependent SA production in the execution of H2O2-mediated cell death.</p></article>", "keywords": ["EXPRESSION", "0106 biological sciences", "0301 basic medicine", "photorespiration", "Cell Respiration", "Meristem", "Arabidopsis", "Cyclopentanes", "catalase2-deficient <i>Arabidopsis</i>", "01 natural sciences", "Article", "ACTIVATION", "catalase2-deficient Arabidopsis", "03 medical and health sciences", "HYDROGEN-PEROXIDE", "Hydroponics", "Gene Expression Regulation", " Plant", "Multienzyme Complexes", "Stress", " Physiological", "Plant Cells", "SALICYLIC-ACID BIOSYNTHESIS", "H<sub>2</sub>O<sub>2</sub> signaling", "Medicine and Health Sciences", "abnormal inflorescence meristem 1", "LEAF SENESCENCE", "Oxylipins", "Photosynthesis", "2. Zero hunger", "QH573-671", "Cell Death", "Arabidopsis Proteins", "Gene Expression Profiling", "Biology and Life Sciences", "Computational Biology", "Hydrogen Peroxide", "ARABIDOPSIS", "MULTIFUNCTIONAL PROTEIN", "3. Good health", "PEROXISOMAL BETA-OXIDATION", "Plant Leaves", "chemical genetics", "CELL-DEATH", "PHENYLALANINE AMMONIA-LYASE", "Seeds", "Cytology", "Salicylic Acid", "H2O2 signaling", "Signal Transduction"]}, "links": [{"href": "http://www.mdpi.com/2073-4409/9/9/2026/pdf"}, {"href": "https://doi.org/10.3390/cells9092026"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Cells", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/cells9092026", "name": "item", "description": "10.3390/cells9092026", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/cells9092026"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-09-02T00:00:00Z"}}, {"id": "1854/LU-8674409", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:22:40Z", "type": "Journal Article", "created": "2020-09-03", "title": "Chemical Genetics Approach Identifies Abnormal Inflorescence Meristem 1 as a Putative Target of a Novel Sulfonamide That Protects Catalase2-Deficient Arabidopsis against Photorespiratory Stress", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Alterations of hydrogen peroxide (H2O2) levels have a profound impact on numerous signaling cascades orchestrating plant growth, development, and stress signaling, including programmed cell death. To expand the repertoire of known molecular mechanisms implicated in H2O2 signaling, we performed a forward chemical screen to identify small molecules that could alleviate the photorespiratory-induced cell death phenotype of Arabidopsisthaliana mutants lacking H2O2-scavenging capacity by peroxisomal catalase2. Here, we report the characterization of pakerine, an m-sulfamoyl benzamide from the sulfonamide family. Pakerine alleviates the cell death phenotype of cat2 mutants exposed to photorespiration-promoting conditions and delays dark-induced senescence in wild-type Arabidopsis leaves. By using a combination of transcriptomics, metabolomics, and affinity purification, we identified abnormal inflorescence meristem 1 (AIM1) as a putative protein target of pakerine. AIM1 is a 3-hydroxyacyl-CoA dehydrogenase involved in fatty acid \u03b2-oxidation that contributes to jasmonic acid (JA) and salicylic acid (SA) biosynthesis. Whereas intact JA biosynthesis was not required for pakerine bioactivity, our results point toward a role for \u03b2-oxidation-dependent SA production in the execution of H2O2-mediated cell death.</p></article>", "keywords": ["EXPRESSION", "0106 biological sciences", "0301 basic medicine", "photorespiration", "Cell Respiration", "Meristem", "Arabidopsis", "Cyclopentanes", "catalase2-deficient <i>Arabidopsis</i>", "01 natural sciences", "Article", "ACTIVATION", "catalase2-deficient Arabidopsis", "03 medical and health sciences", "HYDROGEN-PEROXIDE", "Hydroponics", "Gene Expression Regulation", " Plant", "Multienzyme Complexes", "Stress", " Physiological", "Plant Cells", "SALICYLIC-ACID BIOSYNTHESIS", "H<sub>2</sub>O<sub>2</sub> signaling", "Medicine and Health Sciences", "abnormal inflorescence meristem 1", "LEAF SENESCENCE", "Oxylipins", "Photosynthesis", "2. Zero hunger", "QH573-671", "Cell Death", "Arabidopsis Proteins", "Gene Expression Profiling", "Biology and Life Sciences", "Computational Biology", "Hydrogen Peroxide", "ARABIDOPSIS", "MULTIFUNCTIONAL PROTEIN", "3. Good health", "PEROXISOMAL BETA-OXIDATION", "Plant Leaves", "chemical genetics", "CELL-DEATH", "PHENYLALANINE AMMONIA-LYASE", "Seeds", "Cytology", "Salicylic Acid", "H2O2 signaling", "Signal Transduction"]}, "links": [{"href": "http://www.mdpi.com/2073-4409/9/9/2026/pdf"}, {"href": "https://doi.org/1854/LU-8674409"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Cells", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1854/LU-8674409", "name": "item", "description": "1854/LU-8674409", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1854/LU-8674409"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-09-02T00:00:00Z"}}, {"id": "40302147", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:23:41Z", "type": "Journal Article", "created": "2025-04-30", "title": "Differential xylem phytohormone export from dry and wet roots during partial rootzone drying is independent of shoot\u2010to\u2010root transport in soybean", "description": "Abstract<p>Different phytohormones can act as root\uffe2\uff80\uff90to\uffe2\uff80\uff90shoot signalling molecules in response to soil drying. Recent findings suggest that root ABA levels are predominantly leaf\uffe2\uff80\uff90sourced and not locally synthesized, thus, ABA exported from the roots in the xylem is mostly recycled from the shoot. To explain the differential root hormone accumulation observed under partial rootzone drying (PRD) that imposes distinct dry and wet parts of the root zone, we grafted \uffe2\uff80\uff9ctwo\uffe2\uff80\uff90root, one\uffe2\uff80\uff90shoot\uffe2\uff80\uff9d soybean plants to independently assess xylem export of different phytohormones from either part of the root zone. Grafts were subjected to a combination of girdling (either part, all, or none of the rootzone) and irrigation (homogenously well\uffe2\uff80\uff90watered (WW) and PRD). PRD did not increase foliar ABA but decreased stomatal conductance, attributed to decreased leaf water potential and/or increased xylem sap ABA, JA, or ACC concentrations. In contrast, the foliar ABA increments that accompanied girdling\uffe2\uff80\uff90induced stomatal closure were proportional to the root fraction to which phloem transport was interrupted. Irrespective of girdling, root ABA accumulation (and xylem ABA export from) was highest in the dry PRD rootzone, xylem jasmonic acid (JA) in the wet PRD rootzone, and xylem ACC in both rootzones of PRD plants. Thus, soil drying of the dry root zone and transient overwatering of the wet root zone enhanced ACC export in PRD plants. We conclude that root water status during PRD enhances root ABA, JA and ACC synthesis and xylem export, independent of shoot\uffe2\uff80\uff90to\uffe2\uff80\uff90root transport.</p", "keywords": ["Plant Leaves", "Plant Growth Regulators", "Glycine max", "Xylem", "Water", "Biological Transport", "Cyclopentanes", "Oxylipins", "Desiccation", "Plant Roots", "Plant Shoots", "Original Research", "Abscisic Acid"]}, "links": [{"href": "https://doi.org/40302147"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Physiologia%20Plantarum", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "40302147", "name": "item", "description": "40302147", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/40302147"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-04-29T00:00:00Z"}}, {"id": "PMC12041630", "type": "Feature", "geometry": null, "properties": {"updated": "2026-10-06T16:24:59Z", "type": "Journal Article", "created": "2025-04-30", "title": "Differential xylem phytohormone export from dry and wet roots during partial rootzone drying is independent of shoot\u2010to\u2010root transport in soybean", "description": "Abstract<p>Different phytohormones can act as root\uffe2\uff80\uff90to\uffe2\uff80\uff90shoot signalling molecules in response to soil drying. Recent findings suggest that root ABA levels are predominantly leaf\uffe2\uff80\uff90sourced and not locally synthesized, thus, ABA exported from the roots in the xylem is mostly recycled from the shoot. To explain the differential root hormone accumulation observed under partial rootzone drying (PRD) that imposes distinct dry and wet parts of the root zone, we grafted \uffe2\uff80\uff9ctwo\uffe2\uff80\uff90root, one\uffe2\uff80\uff90shoot\uffe2\uff80\uff9d soybean plants to independently assess xylem export of different phytohormones from either part of the root zone. Grafts were subjected to a combination of girdling (either part, all, or none of the rootzone) and irrigation (homogenously well\uffe2\uff80\uff90watered (WW) and PRD). PRD did not increase foliar ABA but decreased stomatal conductance, attributed to decreased leaf water potential and/or increased xylem sap ABA, JA, or ACC concentrations. In contrast, the foliar ABA increments that accompanied girdling\uffe2\uff80\uff90induced stomatal closure were proportional to the root fraction to which phloem transport was interrupted. Irrespective of girdling, root ABA accumulation (and xylem ABA export from) was highest in the dry PRD rootzone, xylem jasmonic acid (JA) in the wet PRD rootzone, and xylem ACC in both rootzones of PRD plants. Thus, soil drying of the dry root zone and transient overwatering of the wet root zone enhanced ACC export in PRD plants. We conclude that root water status during PRD enhances root ABA, JA and ACC synthesis and xylem export, independent of shoot\uffe2\uff80\uff90to\uffe2\uff80\uff90root transport.</p", "keywords": ["Plant Leaves", "Plant Growth Regulators", "Glycine max", "Xylem", "Water", "Biological Transport", "Cyclopentanes", "Oxylipins", "Desiccation", "Plant Roots", "Plant Shoots", "Original Research", "Abscisic Acid"]}, "links": [{"href": "https://doi.org/PMC12041630"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Physiologia%20Plantarum", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "PMC12041630", "name": "item", "description": "PMC12041630", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PMC12041630"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-04-29T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Pentanes&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Pentanes&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Pentanes&", "hreflang": "en-US"}, {"rel": "last", "type": "application/geo+json", "title": "items (last)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Pentanes&offset=10", "hreflang": "en-US"}], "numberMatched": 10, "numberReturned": 10, "distributedFeatures": [], "timeStamp": "2026-10-22T20:46:54.144655Z"}