Legume roots can be symbiotically colonized by arbuscular mycorrhizal (AM) fungi and nitrogen-fixing bacteria. In Lotus japonicus, the latter occurs intracellularly by the cognate rhizobial partner Mesorhizobium loti or intercellularly with the Agrobacterium pusense strain IRBG74. Although these symbiotic programs show distinctive cellular and transcriptome signatures, some molecular components are shared. In this study, we demonstrate that 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase 1 (DAHPS1), the first enzyme in the biosynthetic pathway of aromatic amino acids (AAAs), plays a critical role in root hair development and for AM and rhizobial symbioses in Lotus. Two homozygous DAHPS1 mutants (dahps1-1 and dahps1-2) showed drastic alterations in root hair morphology, associated with alterations in cell wall dynamics and a progressive disruption of the actin cytoskeleton. The altered root hair structure was prevented by pharmacological and genetic complementation. dahps1-1 and dahps1-2 showed significant reductions in rhizobial infection (intracellular and intercellular) and nodule organogenesis and a delay in AM colonization. RNAseq analysis of dahps1-2 roots suggested that these phenotypes are associated with downregulation of several cell wall\uffe2\uff80\uff93related genes, and with an attenuated signaling response. Interestingly, the dahps1 mutants showed no detectable pleiotropic effects, suggesting a more selective recruitment of this gene in certain biological processes. This work provides robust evidence linking AAA metabolism to root hair development and successful symbiotic associations.Soil salinity is a major contributor to crop yield losses. To improve our understanding of root responses to salinity, we developed and exploited a real-time salt-induced tilting assay. This assay follows root growth upon both gravitropic and salt challenges, revealing that root bending upon tilting is modulated by Na+ ions, but not by osmotic stress. Next, we measured this salt-specific response in 345 natural Arabidopsis (Arabidopsis thaliana) accessions and discovered a genetic locus, encoding the cell wall-modifying enzyme EXTENSIN ARABINOSE DEFICIENT TRANSFERASE (ExAD) that is associated with root bending in the presence of NaCl (hereafter salt). Extensins are a class of structural cell wall glycoproteins known as hydroxyproline (Hyp)-rich glycoproteins, which are posttranslationally modified by O-glycosylation, mostly involving Hyp-arabinosylation. We show that salt-induced ExAD-dependent Hyp-arabinosylation influences root bending responses and cell wall thickness. Roots of exad1 mutant seedlings, which lack Hyp-arabinosylation of extensin, displayed increased thickness of root epidermal cell walls and greater cell wall porosity. They also showed altered gravitropic root bending in salt conditions and a reduced salt-avoidance response. Our results suggest that extensin modification via Hyp-arabinosylation is a unique salt-specific cellular process required for the directional response of roots exposed to salinity.Increasing temperatures and a reduction in the frequency and severity of freezing events have been linked to species distribution shifts. Across the globe, mangrove ranges are expanding toward higher latitudes, likely due to diminishing frequency of freezing events associated with climate change. Continued warming will alter coastal wetland plant dynamics both above\uffe2\uff80\uff90 and belowground, potentially altering plant capacity to keep up with sea level rise. We conducted an in situ warming experiment, in northeast Florida, to determine how increased temperature (+2\uffc2\uffb0C) influences co\uffe2\uff80\uff90occurring mangrove and salt marsh plants. Warming was achieved using passive warming with three treatment levels (ambient, shade control, warmed). Avicennia germinans, the black mangrove, exhibited no differences in growth or height due to experimental warming, but displayed a warming\uffe2\uff80\uff90induced increase in leaf production (48%). Surprisingly, Distichlis spicata, the dominant salt marsh grass, increased in biomass (53% in 2013 and 70% in 2014), density (41%) and height (18%) with warming during summer months. Warming decreased plant root mass at depth and changed abundances of anaerobic bacterial taxa. Even while the poleward shift of mangroves is clearly controlled by the occurrences of severe freezes, chronic warming between these freeze events may slow the progression of mangrove dominance within ecotones.
", "keywords": ["0106 biological sciences", "Time Factors", "13. Climate action", "Climate Change", "Wetlands", "Florida", "Avicennia", "14. Life underwater", "15. Life on land", "Poaceae", "Plant Roots", "01 natural sciences", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1002/ecy.1539"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ecy.1539", "name": "item", "description": "10.1002/ecy.1539", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ecy.1539"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-11-01T00:00:00Z"}}, {"id": "10.1111/j.1461-0248.2010.01570.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:52Z", "type": "Journal Article", "created": "2010-12-22", "title": "Enhanced Root Exudation Induces Microbial Feedbacks To N Cycling In A Pine Forest Under Long-Term Co2 Fumigation", "description": "Ecology Letters (2011) 14: 187\uffe2\uff80\uff93194
AbstractThe degree to which rising atmospheric CO2 will be offset by carbon (C) sequestration in forests depends in part on the capacity of trees and soil microbes to make physiological adjustments that can alleviate resource limitation. Here, we show for the first time that mature trees exposed to CO2 enrichment increase the release of soluble C from roots to soil, and that such increases are coupled to the accelerated turnover of nitrogen (N) pools in the rhizosphere. Over the course of 3\uffe2\uff80\uff83years, we measured in situ rates of root exudation from 420 intact loblolly pine (Pinus taeda L.) roots. Trees fumigated with elevated CO2 (200 p.p.m.v. over background) increased exudation rates (\uffce\uffbcg\uffe2\uff80\uff83C\uffe2\uff80\uff83cm\uffe2\uff88\uff921\uffe2\uff80\uff83root\uffe2\uff80\uff83h\uffe2\uff88\uff921) by 55% during the primary growing season, leading to a 50% annual increase in dissolved organic inputs to fumigated forest soils. These increases in root\uffe2\uff80\uff90derived C were positively correlated with microbial release of extracellular enzymes involved in breakdown of organic N (R2\uffe2\uff80\uff83=\uffe2\uff80\uff830.66; P\uffe2\uff80\uff83=\uffe2\uff80\uff830.006) in the rhizosphere, indicating that exudation stimulated microbial activity and accelerated the rate of soil organic matter (SOM) turnover. In support of this conclusion, trees exposed to both elevated CO2 and N fertilization did not increase exudation rates and had reduced enzyme activities in the rhizosphere. Collectively, our results provide field\uffe2\uff80\uff90based empirical support suggesting that sustained growth responses of forests to elevated CO2 in low fertility soils are maintained by enhanced rates of microbial activity and N cycling fuelled by inputs of root\uffe2\uff80\uff90derived C. To the extent that increases in exudation also stimulate SOM decomposition, such changes may prevent soil C accumulation in forest ecosystems.
", "keywords": ["0106 biological sciences", "Nitrogen", "Plant Exudates", "Pinus taeda", "04 agricultural and veterinary sciences", "15. Life on land", "Carbon Dioxide", "01 natural sciences", "Plant Roots", "Carbon", "Trees", "Soil", "13. Climate action", "Rhizosphere", "North Carolina", "0401 agriculture", " forestry", " and fisheries", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1111/j.1461-0248.2010.01570.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1461-0248.2010.01570.x", "name": "item", "description": "10.1111/j.1461-0248.2010.01570.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1461-0248.2010.01570.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-12-22T00:00:00Z"}}, {"id": "10.1016/j.jenvman.2013.12.024", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-25T16:16:27Z", "type": "Journal Article", "created": "2014-01-24", "title": "Effects Of Long-Term Grazing Disturbance On The Belowground Storage Of Organic Carbon In The Patagonian Monte, Argentina", "description": "The objective of this study was to analyze the effect of grazing disturbance on the amount and the spatial distribution (vertical and horizontal) of root biomass and soil organic carbon (SOC) in order to evaluate whether grazing alters the belowground storage of organic carbon (C) in arid rangelands of the Patagonian Monte. We selected three representative sites (3\u00a0ha each) with low, moderate and high grazing disturbance located far, mid-distance and near the watering point, respectively, in rangelands submitted to sheep grazing for more than 100 years. We assessed the canopy structure and identified the four most frequent plant patch types at each site. We selected four replications of each patch type and extracted a soil sample (0-30\u00a0cm depth) underneath the canopy and in the middle of the nearest inter-patch bare soil area in winter and summer. We assessed the root and soil dry mass and the respective organic C concentration in each sample and then we estimated the total belowground organic C storage at each site. Total plant and perennial grass cover were lower with high than low grazing disturbance while the reverse occurred with dwarf shrub cover. High grazing disturbance led to the increase in total root biomass in the whole soil profile of patch areas and in the upper soil of inter-patch areas. SOC was higher in patch than in inter-patch areas at all sites but at both areas was reduced with high grazing disturbance. This was probably the result of the low total plant cover and the low and recalcitrant contribution of above and below-ground plant litter to soils at sites with high grazing disturbance. Accordingly, these changes did not result in variations in the total belowground organic C storage. We concluded that high grazing disturbance did not affect the total belowground organic C storage but led to changes in the spatial patterning of this organic C storage (i.e shifting from soil to roots).", "keywords": ["0106 biological sciences", "2. Zero hunger", "Carbon Sequestration", "Sheep", "Arid Ecosystems", "Argentina", "Plant Development", "15. Life on land", "Deciduous Shrubs", "Poaceae", "Plant Roots", "01 natural sciences", "Carbon", "Plant Patches", "Soil Organic Carbon", "https://purl.org/becyt/ford/1.6", "Animals", "Biomass", "Herbivory", "https://purl.org/becyt/ford/1", "Root Biomass", "Dwarf Shrubs", "0105 earth and related environmental sciences"], "contacts": [{"organization": "Larreguy, Cecilia, Carrera, Anal\u00eda Lorena, Bertiller, Monica Beatriz,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.jenvman.2013.12.024"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Environmental%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jenvman.2013.12.024", "name": "item", "description": "10.1016/j.jenvman.2013.12.024", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jenvman.2013.12.024"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-02-01T00:00:00Z"}}, {"id": "10.1002/etc.5400", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-25T16:13:54Z", "type": "Journal Article", "created": "2022-06-09", "title": "Arbuscular Mycorrhizal Fungi and the Need for a Meaningful Regulatory Plant Protection Product Testing Strategy", "description": "AbstractArbuscular mycorrhizal fungi (AMF) perform key soil ecosystem services and, because of their symbiotic relationship with plant roots, may be exposed to the plant protection products (PPPs) applied to soils and crops. In 2017, the European Food Safety Authority (EFSA) released a scientific opinion addressing the state of the science on risk assessment of PPPs for in-soil organisms, recommending the inclusion of AMF ecotoxicological testing in the PPP regulatory process. However, it is not clear how this can be implemented in a tiered, robust, and ecologically relevant manner. Through a critical review of current literature, we examine the recommendations made within the EFSA report and the methodologies available to integrate AMF into the PPP risk assessment and provide perspective and commentary on their agronomic and ecological relevance. We conclude that considerable research questions remain to be addressed prior to the inclusion of AMF into the in-soil organism risk assessment, many of which stem from the unique challenges associated with including an obligate symbiont within the PPP risk assessment. Finally, we highlight critical knowledge gaps and the further research required to enable development of relevant, reliable, and robust scientific tests alongside pragmatic and scientifically sound guidance to ensure that any future risk-assessment paradigm is adequately protective of the ecosystem services it aims to preserve. Environ Toxicol Chem 2022;41:1808\uffe2\uff80\uff931823. \uffc2\uffa9 2022 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC.BACKGROUND: Drought is a major environmental stress limiting plant growth, productivity, and survival worldwide. Rootstocks are widely used to enhance plants resistance to drought stresses. This study determined influence of rootstock on drought responses in 1\uffe2\uff80\uff90year\uffe2\uff80\uff90old \uffe2\uff80\uff98Gale Gala\uffe2\uff80\uff99 apple trees grafted onto Malus sieversii or M. hupehensis.
RESULTS: Choice of rootstock resulted in differential response to drought stress. Specifically, M. sieversii caused less drought\uffe2\uff80\uff90induced reduction in relative growth rate, biomass accumulation, leaf area, leaf chlorophyll content, relative water content, photosynthesis rate and maximum chlorophyll fluorescence yield but greater increase in whole\uffe2\uff80\uff90plant water use efficiency compared to M. hupehensis. Secondly, compared with M. hupehensis, M. sieversii caused less drought\uffe2\uff80\uff90induced accumulation of reactive oxygen species but more increase in activities of antioxidant enzymes. In addition, xylem sap abscisic acid concentration was greater in trees grafted onto M. hupehensis than in those grafted onto M. sieversii under drought stress.
CONCLUSION: \uffe2\uff80\uff98Gale Gala\uffe2\uff80\uff99 trees' response to drought stress was associated with the rootstock's genotype onto which it was grafted. Trees with M. sieversii as rootstock are more drought resistant than trees with M. hupehensis as rootstock, which suggests that M. sieversii can be widely used as rootstock in arid and semi\uffe2\uff80\uff90arid regions. Copyright \uffc2\uffa9 2012 Society of Chemical Industry
", "keywords": ["Chlorophyll", "0301 basic medicine", "Plant Roots", "Antioxidants", "Fluorescence", "Trees", "03 medical and health sciences", "Species Specificity", "Stress", " Physiological", "Xylem", "Biomass", "Photosynthesis", "2. Zero hunger", "0402 animal and dairy science", "Water", "04 agricultural and veterinary sciences", "15. Life on land", "Adaptation", " Physiological", "6. Clean water", "Droughts", "Plant Leaves", "Malus", "0401 agriculture", " forestry", " and fisheries", "0405 other agricultural sciences", "Reactive Oxygen Species", "Abscisic Acid"], "contacts": [{"organization": "Binghua Liu, Fengwang Ma, Dong Liang, Yangjun Zou, Liang Cheng,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1002/jsfa.5647"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20the%20Science%20of%20Food%20and%20Agriculture", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/jsfa.5647", "name": "item", "description": "10.1002/jsfa.5647", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/jsfa.5647"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-03-19T00:00:00Z"}}, {"id": "10.1002/jsfa.8606", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:13:58Z", "type": "Journal Article", "created": "2017-07-31", "title": "How Are Arbuscular Mycorrhizal Associations Related To Maize Growth Performance During Short-Term Cover Crop Rotation?", "description": "AbstractBACKGROUNDBetter cover crop management options aiming to maximize the benefits of arbuscular mycorrhizal fungi (AMF) to subsequent crops are largely unknown. We investigated the impact of cover crop management methods on maize growth performance and assemblages of AMF colonizing maize roots in a field trial. The cover crop treatments comprised Italian ryegrass, wheat, brown mustard and fallow in rotation with maize.
RESULTSThe diversity of AMF communities among cover crops used for maize management was significantly influenced by the cover crop and time course. Cover crops did not affect grain yield and aboveground biomass of subsequent maize but affected early growth. A structural equation model indicated that the root colonization, AMF diversity and maize phosphorus uptake had direct strong positive effects on yield performance.
CONCLUSIONAMF variables and maize performance were related directly or indirectly to maize grain yield, whereas root colonization had a positive effect on maize performance. AMF may be an essential factor that determines the success of cover crop rotational systems. Encouraging AMF associations can potentially benefit cover cropping systems. Therefore, it is imperative to consider AMF associations and crop phenology when making management decisions. \uffc2\uffa9 2017 Society of Chemical Industry
", "keywords": ["2. Zero hunger", "0301 basic medicine", "0303 health sciences", "0402 animal and dairy science", "Agriculture", "Phosphorus", "04 agricultural and veterinary sciences", "15. Life on land", "Plant Roots", "Zea mays", "Crop Production", "03 medical and health sciences", "Mycorrhizae", "Lolium", "0405 other agricultural sciences", "Soil Microbiology", "Triticum", "Mustard Plant"]}, "links": [{"href": "https://doi.org/10.1002/jsfa.8606"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20the%20Science%20of%20Food%20and%20Agriculture", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/jsfa.8606", "name": "item", "description": "10.1002/jsfa.8606", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/jsfa.8606"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-09-11T00:00:00Z"}}, {"id": "10.1007/s00248-008-9390-y", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-05-25T16:14:13Z", "type": "Journal Article", "created": "2008-04-28", "title": "Plant Responses To Drought Stress And Exogenous Aba Application Are Modulated Differently By Mycorrhization In Tomato And An Aba-Deficient Mutant (Sitiens)", "description": "The aims of the present study are to find out whether the effects of arbuscular mycorrhizal (AM) symbiosis on plant resistance to water deficit are mediated by the endogenous abscisic acid (ABA) content of the host plant and whether the exogenous ABA application modifies such effects. The ABA-deficient tomato mutant sitiens and its near-isogenic wild-type parental line were used. Plant development, physiology, and expression of plant genes expected to be modulated by AM symbiosis, drought, and ABA were studied. Results showed that only wild-type tomato plants responded positively to mycorrhizal inoculation, while AM symbiosis was not observed to have any effect on plant development in sitiens plants grown under well-watered conditions. The application of ABA to sitiens plants enhanced plant growth both under well-watered and drought stress conditions. In respect to sitiens plants subjected to drought stress, the addition of ABA had a cumulative effect in relation to that of inoculation with G. intraradices. Most of the genes analyzed in this study showed different regulation patterns in wild-type and sitiens plants, suggesting that their gene expression is modulated by the plant ABA phenotype. In the same way, the colonization of roots with the AM fungus G. intraradices differently regulated the expression of these genes in wild-type and in sitiens plants, which could explain the distinctive effect of the symbiosis on each plant ABA phenotype. This also suggests that the effects of the AM symbiosis on plant responses and resistance to water deficit are mediated by the plant ABA phenotype.", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "15. Life on land", "Adaptation", " Physiological", "Plant Roots", "6. Clean water", "Droughts", "03 medical and health sciences", "Solanum lycopersicum", "Mycorrhizae", "Mutation", "Symbiosis", "Abscisic Acid"]}, "links": [{"href": "https://doi.org/10.1007/s00248-008-9390-y"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Microbial%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00248-008-9390-y", "name": "item", "description": "10.1007/s00248-008-9390-y", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00248-008-9390-y"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-04-29T00:00:00Z"}}, {"id": "10.1007/s00425-024-04556-2", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-25T16:14:21Z", "type": "Journal Article", "created": "2024-10-23", "title": "Root exudation patterns of contrasting rice (Oryza sativa L.) lines in response to P limitation", "description": "Abstract Main conclusionRice exudation patterns changed in response to P deficiency. Higher exudation rates were associated with lower biomass production. Total carboxylate exudation rates mostly decreased under P-limiting conditions.
AbstractWithin the rhizosphere, root exudates are believed to play an important role in plant phosphorus (P) acquisition. This could be particularly beneficial in upland rice production where P is often limited. However, knowledge gaps remain on how P deficiency shapes quality and quantity of root exudation in upland rice genotypes. We therefore investigated growth, plant P uptake, and root exudation patterns of two rice genotypes differing in P efficiency in semi-hydroponics at two P levels (low P\uffe2\uff80\uff89=\uffe2\uff80\uff891\uffc2\uffa0\uffc2\uffb5M, adequate P\uffe2\uff80\uff89=\uffe2\uff80\uff89100\uffc2\uffa0\uffc2\uffb5M). Root exudates were collected hydroponically 28 and 40\uffc2\uffa0days after germination to analyze total carbon (C), carbohydrates, amino acids, phenolic compounds spectrophotometrically and carboxylates using a targeted LC\uffe2\uff80\uff93MS approach. Despite their reported role in P solubilization, we observed that carboxylate exudation rates per unit root surface area were not increased under P deficiency. In contrast, exudation rates of total C, carbohydrates, amino acids and phenolics were mostly enhanced in response to low P supply. Overall, higher exudation rates were associated with lower biomass production in the P-inefficient genotype Nerica4, whereas the larger root system with lower C investment (per unit root surface area) in root exudates of the P-efficient DJ123 allowed for better plant growth under P deficiency. Our results reveal new insights into genotype-specific resource allocation in rice under P-limiting conditions that warrant follow-up research including more genotypes.
", "keywords": ["Genotype", "Hydroponics", "carbohydrates ; phenolics ; amino acids ; carboxylates ; phosphorus", "Plant Exudates", "Rhizosphere", "Original Article", "Oryza", "Phosphorus", "Biomass", "Amino Acids", "Plant Roots", "Carbon"], "contacts": [{"organization": "Henning Schwalm, Christiana Staudinger, Mohammad-Reza Hajirezaei, Eva Mundschenk, Alireza Golestanifard, Maire Holz, Matthias Wissuwa, Eva Oburger,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s00425-024-04556-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Planta", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00425-024-04556-2", "name": "item", "description": "10.1007/s00425-024-04556-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00425-024-04556-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-10-23T00:00:00Z"}}, {"id": "10.1007/s00442-006-0381-8", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-25T16:14:22Z", "type": "Journal Article", "created": "2006-02-17", "description": "The aspen free-air CO2 and O3 enrichment (FACTS II-FACE) study in Rhinelander, Wisconsin, USA, is designed to understand the mechanisms by which young northern deciduous forest ecosystems respond to elevated atmospheric carbon dioxide (CO2) and elevated tropospheric ozone (O3) in a replicated, factorial, field experiment. Soil respiration is the second largest flux of carbon (C) in these ecosystems, and the objective of this study was to understand how soil respiration responded to the experimental treatments as these fast-growing stands of pure aspen and birch + aspen approached maximum leaf area. Rates of soil respiration were typically lowest in the elevated O3 treatment. Elevated CO2 significantly stimulated soil respiration (8-26%) compared to the control treatment in both community types over all three growing seasons. In years 6-7 of the experiment, the greatest rates of soil respiration occurred in the interaction treatment (CO2 + O3), and rates of soil respiration were 15-25% greater in this treatment than in the elevated CO2 treatment, depending on year and community type. Two of the treatments, elevated CO2 and elevated CO2 + O3, were fumigated with 13C-depleted CO2, and in these two treatments we used standard isotope mixing models to understand the proportions of new and old C in soil respiration. During the peak of the growing season, C fixed since the initiation of the experiment in 1998 (new C) accounted for 60-80% of total soil respiration. The isotope measurements independently confirmed that more new C was respired from the interaction treatment compared to the elevated CO2 treatment. A period of low soil moisture late in the 2003 growing season resulted in soil respiration with an isotopic signature 4-6 per thousand enriched in 13C compared to sample dates when the percentage soil moisture was higher. In 2004, an extended period of low soil moisture during August and early September, punctuated by a significant rainfall event, resulted in soil respiration that was temporarily 4-6 per thousand more depleted in 13C. Up to 50% of the Earth's forests will see elevated concentrations of both CO2 and O3 in the coming decades and these interacting atmospheric trace gases stimulated soil respiration in this study.", "keywords": ["0106 biological sciences", "Science", "Ecology and Evolutionary Biology", "Cell Respiration", "Acer", "Carbon Cycling", "Plant Roots", "01 natural sciences", "Trees", "Soil", "Ozone", "Stable Isotope", "Air Pollution", "Health Sciences", "\u03b4 13 C", "Global Change", "Cellular and Developmental Biology", "Betula", "Ecosystem", "Soil Microbiology", "Carbon Isotopes", "Atmosphere", "Natural Resources and Environment", "Molecular", "Carbon Dioxide", "15. Life on land", "Populus", "13. Climate action"]}, "links": [{"href": "https://doi.org/10.1007/s00442-006-0381-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-006-0381-8", "name": "item", "description": "10.1007/s00442-006-0381-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-006-0381-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2006-02-18T00:00:00Z"}}, {"id": "10.1007/s00442-006-0392-5", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:22Z", "type": "Journal Article", "created": "2006-03-17", "title": "Co2 And N-Fertilization Effects On Fine-Root Length, Production, And Mortality: A 4-Year Ponderosa Pine Study", "description": "We conducted a 4-year study of juvenile Pinus ponderosa fine root (< or =2 mm) responses to atmospheric CO2 and N-fertilization. Seedlings were grown in open-top chambers at three CO2 levels (ambient, ambient+175 mumol/mol, ambient+350 mumol/mol) and three N-fertilization levels (0, 10, 20 g m(-2) year(-1)). Length and width of individual roots were measured from minirhizotron video images bimonthly over 4 years starting when the seedlings were 1.5 years old. Neither CO2 nor N-fertilization treatments affected the seasonal patterns of root production or mortality. Yearly values of fine-root length standing crop (m m(-2)), production (m m(-2) year(-1)), and mortality (m m(-2) year(-1)) were consistently higher in elevated CO2 treatments throughout the study, except for mortality in the first year; however, the only statistically significant CO2 effects were in the fine-root length standing crop (m m(-2)) in the second and third years, and production and mortality (m m(-2) year(-1)) in the third year. Higher mortality (m m(-2) year(-1)) in elevated CO2 was due to greater standing crop rather than shorter life span, as fine roots lived longer in elevated CO2. No significant N effects were noted for annual cumulative production, cumulative mortality, or mean standing crop. N availability did not significantly affect responses of fine-root standing crop, production, or mortality to elevated CO2. Multi-year studies at all life stages of trees are important to characterize belowground responses to factors such as atmospheric CO2 and N-fertilization. This study showed the potential for juvenile ponderosa pine to increase fine-root C pools and C fluxes through root mortality in response to elevated CO2.", "keywords": ["0106 biological sciences", "2. Zero hunger", "Atmosphere", "Nitrogen", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "Plant Roots", "01 natural sciences", "Pinus ponderosa", "Seedlings", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Fertilizers"], "contacts": [{"organization": "Mark Johnson, J. Timothy Ball, Dale W. Johnson, Marjorie J. Storm, Donald L. Phillips, David T. Tingey,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s00442-006-0392-5"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-006-0392-5", "name": "item", "description": "10.1007/s00442-006-0392-5", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-006-0392-5"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2006-03-18T00:00:00Z"}}, {"id": "10.1007/s00442-006-0515-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:22Z", "type": "Journal Article", "created": "2006-08-23", "title": "Aboveground Productivity And Root-Shoot Allocation Differ Between Native And Introduced Grass Species", "description": "Plant species in grasslands are often separated into groups (C(4) and C(3) grasses, and forbs) with presumed links to ecosystem functioning. Each of these in turn can be separated into native and introduced (i.e., exotic) species. Although numerous studies have compared plant traits between the traditional groups of grasses and forbs, fewer have compared native versus introduced species. Introduced grass species, which were often introduced to prevent erosion or to improve grazing opportunities, have become common or even dominant species in grasslands. By virtue of their abundances, introduced species may alter ecosystems if they differ from natives in growth and allocation patterns. Introduced grasses were probably selected nonrandomly from the source population for forage (aboveground) productivity. Based on this expectation, aboveground production is predicted to be greater and root mass fraction to be smaller in introduced than native species. We compared root and shoot distribution and tissue quality between introduced and native C(4) grass species in the Blackland Prairie region of Central Texas, USA, and then compared differences to the more well-studied divergence between C(4) grasses and forbs. Comparisons were made in experimental monocultures planted with equal-sized transplants on a common soil type and at the same density. Aboveground productivity and C:N ratios were higher, on average, in native grasses than in native forbs, as expected. Native and introduced grasses had comparable amounts of shallow root biomass and tissue C:N ratios. However, aboveground productivity and total N were lower and deep root biomass and root mass fraction were greater in native than introduced grasses. These differences in average biomass distribution and N could be important to ecosystems in cases where native and introduced grasses have been exchanged. Our results indicate that native-introduced status may be important when interpreting species effects on grassland processes like productivity and plant N accumulation.", "keywords": ["580", "0106 biological sciences", "2. Zero hunger", "570", "Invasive species", "Nitrogen", "Exotic species", "Root biomass", "04 agricultural and veterinary sciences", "15. Life on land", "Poaceae", "Texas", "Plant Roots", "01 natural sciences", "Carbon", "Introduced species", "Grasslands", "0401 agriculture", " forestry", " and fisheries", "Biomass", "Agricultural Science", "Tallgrass prairie", "Ecosystem", "Plant Shoots"]}, "links": [{"href": "https://doi.org/10.1007/s00442-006-0515-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-006-0515-z", "name": "item", "description": "10.1007/s00442-006-0515-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-006-0515-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2006-08-23T00:00:00Z"}}, {"id": "10.1007/s00442-003-1329-x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:22Z", "type": "Journal Article", "created": "2003-11-21", "title": "Effects Of Earthworms And Organic Litter Distribution On Plant Performance And Aphid Reproduction", "description": "Human management practices and large detritivores such as earthworms incorporate plant litter into the soil, thereby forming a heterogeneous soil environment from which plant roots extract nutrients. In a greenhouse experiment we investigated effects of earthworms and spatial distribution of (15)N-labelled grass litter on plants of different functional groups [ Lolium perenne (grass), Plantago lanceolata (forb), Trifolium repens (legume)]. Earthworms enhanced shoot and root growth in L. perenne and P. lanceolata and N uptake from organic litter and soil in all plant species. Litter concentrated in a patch (compared with litter mixed homogeneously into the soil) increased shoot biomass and (15)N uptake from the litter in L. perenne and enhanced root proliferation in P. lanceolata when earthworms were present. Growth of clover (T. repens) was rather independent of the presence of earthworms and organic litter distribution: nevertheless, clover took up more nitrogen in the presence of earthworms and exploited more (15)N from the added litter than the other plant species. The magnitude of the effects of earthworms and organic litter distribution differed between the plant species, indicating different responses of plants with contrasting root morphology. Aphid (Myzus persicae) reproduction was reduced on P. lanceolata in the presence of earthworms. We suggest that earthworm activity may indirectly alter plant chemistry and hence defence mechanisms against herbivores.", "keywords": ["0106 biological sciences", "2. Zero hunger", "Nitrogen Radioisotopes", "Nitrogen", "Fabaceae", "04 agricultural and veterinary sciences", "Plants", "15. Life on land", "Poaceae", "Plant Roots", "01 natural sciences", "Aphids", "Animals", "0401 agriculture", " forestry", " and fisheries", "Oligochaeta", "Plantago", "Plant Shoots"]}, "links": [{"href": "https://doi.org/10.1007/s00442-003-1329-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-003-1329-x", "name": "item", "description": "10.1007/s00442-003-1329-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-003-1329-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2003-09-01T00:00:00Z"}}, {"id": "10.1007/s00442-004-1687-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:22Z", "type": "Journal Article", "created": "2004-08-18", "title": "Nutrient Uptake As A Contributing Explanation For Deep Rooting In Arid And Semi-Arid Ecosystems", "description": "Explanations for the occurrence of deep-rooted plants in arid and semi-arid ecosystems have traditionally emphasized the uptake of relatively deep soil water. However, recent hydrologic data from arid systems show that soil water potentials at depth fluctuate little over long time periods, suggesting this water may be rarely utilized or replenished. In this study, we examine the distributions of root biomass, soil moisture and nutrient contents to 10-m depths at five semi-arid and arid sites across southwestern USA. We couple these depth distributions with strontium (Sr) isotope data that show deep (>1 m) nutrient uptake is prevalent at four of the five sites. At all of the sites, the highest abundance of one or more of the measured nutrients occurred deep within the soil profile, particularly for P, Ca2+ and Mg2+. Phosphate contents were greater at depth than in the top meter of soil at three of five sites. At Jornada, for example, the 2-3 m depth increment had twice the extractable P as the top meter of soil, despite the highest concentrations of P occurring at the surface. The prevalence of such deep resource pools, and our evidence for cation uptake from them, suggest nutrient uptake as a complementary explanation for the occurrence of deep-rooted plants in arid and semi-arid systems. We propose that hydraulic redistribution of shallow surface water to deep soil layers by roots may be the mechanism through which deep soil nutrients are mobilized and taken up by plants.", "keywords": ["2. Zero hunger", "0106 biological sciences", "Fresh Water", "Humidity", "Phosphorus", "04 agricultural and veterinary sciences", "15. Life on land", "Plant Roots", "01 natural sciences", "Soil", "Strontium Isotopes", "13. Climate action", "Southwestern United States", "0401 agriculture", " forestry", " and fisheries", "Calcium", "Magnesium", "Biomass", "Ecosystem", "Plant Physiological Phenomena"]}, "links": [{"href": "https://doi.org/10.1007/s00442-004-1687-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-004-1687-z", "name": "item", "description": "10.1007/s00442-004-1687-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-004-1687-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-08-19T00:00:00Z"}}, {"id": "10.1007/s00442-005-0109-1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:22Z", "type": "Journal Article", "created": "2005-07-07", "title": "Plant N Capture From Pulses: Effects Of Pulse Size, Growth Rate, And Other Soil Resources", "description": "In arid ecosystems, the ability to rapidly capture nitrogen (N) from brief pulses is expected to influence plant growth, survival, and competitive ability. Theory and data suggest that N capture from pulses should depend on plant growth rate and availability of other limiting resources. Theory also predicts trade-offs in plant stress tolerance and ability to capture N from different size pulses. We injected K15NO3, to simulate small and large N pulses at three different times during the growing season into soil around the co-dominant Great Basin species Sarcobatus vermiculatus, Chrysothamnus nauseosus ssp. consimilis, and Distichlis spicata. Soils were amended with water and P in a partial factorial design. As predicted, all study species showed a comparable decline in N capture from large pulses through the season as growth rates slowed. Surprisingly, however, water and P availability differentially influenced the ability of these species to capture N from pulses. Distichlis N capture increased up to tenfold with water addition while Chrysothamnus N capture increased up to threefold with P addition. Sarcobatus N capture was not affected by water or P availability. Opposite to our prediction, Sarcobatus, the most stress tolerant species, captured less N from small pulses but more N from large pulses relative to the other species. These observations suggest that variation in N pulse timing and size can interact with variable soil water and P supply to determine how N is partitioned among co-existing Great Basin species.", "keywords": ["2. Zero hunger", "0106 biological sciences", "Nitrates", "Time Factors", "Nitrogen Isotopes", "Nitrogen", "Potassium Compounds", "Water", "Phosphorus", "15. Life on land", "Plant Roots", "01 natural sciences", "California", "Plant Leaves", "Magnoliopsida", "Soil", "Seasons", "Plant Shoots"], "contacts": [{"organization": "Jeremy J. James, James H. Richards,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s00442-005-0109-1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-005-0109-1", "name": "item", "description": "10.1007/s00442-005-0109-1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-005-0109-1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-07-08T00:00:00Z"}}, {"id": "10.1007/s00442-005-0191-4", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-25T16:14:22Z", "type": "Journal Article", "created": "2005-07-22", "title": "Fine Root Chemistry And Decomposition In Model Communities Of North-Temperate Tree Species Show Little Response To Elevated Atmospheric Co2 And Varying Soil Resource Availability", "description": "Rising atmospheric [CO2] has the potential to alter soil carbon (C) cycling by increasing the content of recalcitrant constituents in plant litter, thereby decreasing rates of decomposition. Because fine root turnover constitutes a large fraction of annual NPP, changes in fine root decomposition are especially important. These responses will likely be affected by soil resource availability and the life history characteristics of the dominant tree species. We evaluated the effects of elevated atmospheric [CO2] and soil resource availability on the production and chemistry, mycorrhizal colonization, and decomposition of fine roots in an early- and late-successional tree species that are economically and ecologically important in north temperate forests. Open-top chambers were used to expose young trembling aspen (Populus tremuloides) and sugar maple (Acer saccharum) trees to ambient (36 Pa) and elevated (56 Pa) atmospheric CO2. Soil resource availability was composed of two treatments that bracketed the range found in the Upper Lake States, USA. After 2.5 years of growth, sugar maple had greater fine root standing crop due to relatively greater allocation to fine roots (30% of total root biomass) relative to aspen (7% total root biomass). Relative to the low soil resources treatment, aspen fine root biomass increased 76% with increased soil resource availability, but only under elevated [CO2]. Sugar maple fine root biomass increased 26% with increased soil resource availability (relative to the low soil resources treatment), and showed little response to elevated [CO2]. Concentrations of N and soluble phenolics, and C/N ratio in roots were similar for the two species, but aspen had slightly higher lignin and lower condensed tannins contents compared to sugar maple. As predicted by source-sink models of carbon allocation, pooled constituents (C/N ratio, soluble phenolics) increased in response to increased relative carbon availability (elevated [CO2]/low soil resource availability), however, biosynthetically distinct compounds (lignin, starch, condensed tannins) did not always respond as predicted. We found that mycorrhizal colonization of fine roots was not strongly affected by atmospheric [CO2] or soil resource availability, as indicated by root ergosterol contents. Overall, absolute changes in root chemical composition in response to increases in C and soil resource availability were small and had no effect on soil fungal biomass or specific rates of fine root decomposition. We conclude that root contributions to soil carbon cycling will mainly be influenced by fine root production and turnover responses to rising atmospheric [CO2], rather than changes in substrate chemistry.", "keywords": ["0106 biological sciences", "Science", "Climate", "Ecology and Evolutionary Biology", "Plant Roots", "01 natural sciences", "Trees", "Sugar Maple", "Soil", "Ergosterol", "Health Sciences", "Carbon-based Secondary Compounds", "Biomass", "Cellular and Developmental Biology", "Ecosystem", "Soil Microbiology", "Atmosphere", "Fungi", "Natural Resources and Environment", "Molecular", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "Soil C Cycling", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Trembling Aspen"]}, "links": [{"href": "https://doi.org/10.1007/s00442-005-0191-4"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-005-0191-4", "name": "item", "description": "10.1007/s00442-005-0191-4", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-005-0191-4"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-07-23T00:00:00Z"}}, {"id": "10.1007/s00442-011-2092-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:23Z", "type": "Journal Article", "created": "2011-08-17", "title": "Absence Of Snow Cover Reduces Understory Plant Cover And Alters Plant Community Composition In Boreal Forests", "description": "Snow regimes affect biogeochemistry of boreal ecosystems and are altered by climate change. The effects on plant communities, however, are largely unexplored despite their influence on relevant processes. Here, the impact of snow cover on understory community composition and below-ground production in a boreal Picea abies forest was investigated using a long-term (8-year) snow cover manipulation experiment consisting of the treatments: snow removal, increased insulation (styrofoam pellets), and control. The snow removal treatment caused longer (118 vs. 57 days) and deeper soil frost (mean minimum temperature -5.5 vs. -2.2\u00b0C) at 10 cm soil depth in comparison to control. Understory species composition was strongly altered by the snow cover manipulations; vegetation cover declined by more than 50% in the snow removal treatment. In particular, the dominant dwarf shrub Vaccinium myrtillus (-82%) and the most abundant mosses Pleurozium schreberi (-74%) and Dicranum scoparium (-60%) declined strongly. The C:N ratio in V. myrtillus leaves and plant available N in the soil indicated no altered nitrogen nutrition. Fine-root biomass in summer, however, was negatively affected by the reduced snow cover (-50%). Observed effects are attributed to direct frost damage of roots and/ or shoots. Besides the obvious relevance of winter processes on plant ecology and distribution, we propose that shifts in the vegetation caused by frost damage may be an important driver of the reported alterations in biogeochemistry in response to altered snow cover. Understory plant performance clearly needs to be considered in the biogeochemistry of boreal systems in the face of climate change.", "keywords": ["0106 biological sciences", "Time Factors", "Nitrogen", "Climate Change", "Biodiversity", "15. Life on land", "Plant Roots", "01 natural sciences", "Carbon", "Trees", "13. Climate action", "Snow", "Freezing", "Seasons", "Picea", "Ecosystem", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1007/s00442-011-2092-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-011-2092-z", "name": "item", "description": "10.1007/s00442-011-2092-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-011-2092-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-08-18T00:00:00Z"}}, {"id": "10.1007/s00442-012-2576-5", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:23Z", "type": "Journal Article", "created": "2013-01-22", "title": "An Alpine Treeline In A Carbon Dioxide-Rich World: Synthesis Of A Nine-Year Free-Air Carbon Dioxide Enrichment Study", "description": "Open AccessOecologia, 171 (3)", "keywords": ["Carbon cycling", "0106 biological sciences", "0301 basic medicine", "Nitrogen", "Dwarf shrub", "Carbon Dioxide", "Plant Roots", "01 natural sciences", "Trees", "Soil", "03 medical and health sciences", "Carbon cycling; Dwarf shrub; Global change; Nitrogen; Treeline conifer", "Treeline conifer", "Global change", "Ecosystem", "Plant Physiological Phenomena", "Soil Microbiology", "Switzerland"]}, "links": [{"href": "https://doi.org/10.1007/s00442-012-2576-5"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-012-2576-5", "name": "item", "description": "10.1007/s00442-012-2576-5", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-012-2576-5"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-01-23T00:00:00Z"}}, {"id": "10.1007/s00572-015-0655-2", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-05-25T16:14:24Z", "type": "Journal Article", "created": "2015-07-25", "title": "The Ectomycorrhizal Community Of Conifer Stands On Peat Soils 12 Years After Fertilization With Wood Ash", "description": "We studied long-term effects of fertilization with wood ash on biomass, vitality and mycorrhizal colonization of fine roots in three conifer forest stands growing in Vacciniosa turf. mel. (V), Myrtillosa turf. mel. (M) and Myrtillosa turf. mel./Caricoso-phragmitosa (MC) forest types on peat soils. Fertilization trials amounting 5 kg/m(2) of wood ash were established 12 years prior to this study. A total of 63 soil samples with roots were collected and analysed. Ectomycorrhizal (ECM) fungi in roots were identified by morphotyping and sequencing of the fungal internal transcribed spacer (ITS) region. In all forest types, fine root biomass was higher in fertilized plots than in control plots. In M forest type, proportion of living fine roots was greater in fertilized plots than in control plots, while in V and MC, the result was opposite. Fifty ECM species were identified, of which eight were common to both fertilized and control plots. Species richness and Shannon diversity index were generally higher in fertilized plots than in control plots. The most common species in fertilized plots were Amphinema byssoides (17.8%) and Tuber cf. anniae (12.2%), while in control plots, it was Tylospora asterophora (18.5%) and Lactarius tabidus (20.3%). Our results showed that forest fertilization with wood ash has long-lasting effect on diversity and composition of ECM fungal communities.", "keywords": ["0106 biological sciences", "570", "forest fertilization", "m\u00e4nty", "Molecular Sequence Data", "organic soils", "fine roots", "Plant Roots", "01 natural sciences", "630", "mets\u00e4nlannoitus", "Mycorrhizae", "ectomycorrhizae", "DNA", " Ribosomal Spacer", "Muut aihealueet", "DNA", " Fungal", "2. Zero hunger", "Picea abies", "Pinus sylvestris", "Sequence Analysis", " DNA", "04 agricultural and veterinary sciences", "15. Life on land", "Biota", "hienojuuret", "kuusi", "Tracheophyta", "eloper\u00e4iset maat", "0401 agriculture", " forestry", " and fisheries", "ektomykorritsa"]}, "links": [{"href": "https://doi.org/10.1007/s00572-015-0655-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Mycorrhiza", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00572-015-0655-2", "name": "item", "description": "10.1007/s00572-015-0655-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00572-015-0655-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-07-26T00:00:00Z"}}, {"id": "10.1007/s10661-017-5947-x", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-05-25T16:14:38Z", "type": "Journal Article", "created": "2017-04-14", "description": "Understanding the responses of vegetation characteristics and soil properties to grazing disturbance is useful for grassland ecosystem restoration and management in semiarid areas. Here, we examined the effects of long-term grazing on vegetation characteristics, soil properties, and their relationships across four grassland types (meadow, Stipa steppe, scattered tree grassland, and sandy grassland) in the Horqin grassland, northern China. Our results showed that grazing greatly decreased vegetation cover, aboveground plant biomass, and root biomass in all four grassland types. Plant cover and aboveground biomass of perennials were decreased by grazing in all four grasslands, whereas grazing increased the cover and biomass of shrubs in Stipa steppe and of annuals in scattered tree grassland. Grazing decreased soil carbon and nitrogen content in Stipa steppe and scattered tree grassland, whereas soil bulk density showed the opposite trend. Long-term grazing significantly decreased soil pH and electrical conductivity (EC) in annual-dominated sandy grassland. Soil moisture in fenced and grazed grasslands decreased in the following order of meadow, Stipa steppe, scattered tree grassland, and sandy grassland. Correlation analyses showed that aboveground plant biomass was significantly positively associated with the soil carbon and nitrogen content in grazed and fenced grasslands. Species richness was significantly positively correlated with soil bulk density, moisture, EC, and pH in fenced grasslands, but no relationship was detected in grazed grasslands. These results suggest that the soil carbon and nitrogen content significantly maintains ecosystem function in both fenced and grazed grasslands. However, grazing may eliminate the association of species richness with soil properties in semiarid grasslands.", "keywords": ["0106 biological sciences", "2. Zero hunger", "China", "Nitrogen", "04 agricultural and veterinary sciences", "Plants", "15. Life on land", "Grassland", "Plant Roots", "01 natural sciences", "Carbon", "Soil", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Biomass", "Herbivory", "Ecosystem", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.1007/s10661-017-5947-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Monitoring%20and%20Assessment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10661-017-5947-x", "name": "item", "description": "10.1007/s10661-017-5947-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10661-017-5947-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-04-14T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2019.01.095", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:42Z", "type": "Journal Article", "created": "2019-01-10", "title": "The Cover Crop Determines The Amf Community Composition In Soil And In Roots Of Maize After A Ten-Year Continuous Crop Rotation", "description": "Intensive agricultural practices are responsible for soil biological degradation. By stimulating indigenous arbuscular mycorrhizal fungi (AMF), cover cropping enhances soil health and promotes agroecosystem sustainability. Still, the legacy effects of cover crops (CCs) and the major factors driving the AM fungal community are not well known; neither is the influence of the specific CC. This work describes a field experiment established in Central Spain to test the effect of replacing winter fallow by barley (Hordeum vulgare L.) or vetch (Vicia sativa L.) during the intercropping of maize (Zea mays L.). We examined the community composition of the AMF in the roots and rhizosphere soil associated with the subsequent cash crop after 10\u202fyears of cover cropping, using Illumina technology. The multivariate analysis showed that the AMF communities under the barley treatment differed significantly from those under fallow, whereas no legacy effect of the vetch CC was detected. Soil organic carbon, electrical conductivity, pH, Ca and microbial biomass carbon were identified as major factors shaping soil AMF communities. Specific AMF taxa were found to play a role in plant uptake of P, Fe, Zn, Mn, and Cd, which may shed light on the functionality of these taxa. In our conditions, the use of barley as a winter CC appears to be an appropriate choice with respect to promotion of AMF populations and biological activity in agricultural soils with intercropping systems. However, more research on CC species and their legacy effect on the microbial community composition and functionality are needed to guide decisions in knowledge-based agriculture.", "keywords": ["Crops", " Agricultural", "2. Zero hunger", "Diversity", "Cover cropping", "Grass", "Arbuscular mycorrhizal fungi", "Agriculture", "Hordeum", "04 agricultural and veterinary sciences", "15. Life on land", "Plant Roots", "Zea mays", "Crop Production", "Legume", "Spain", "Long-term experiment", "Mycorrhizae", "Long-term experiments", "Rhizosphere", "0401 agriculture", " forestry", " and fisheries", "Illumina technology", "Mediterranean climate", "Soil Microbiology", "Mycobiome"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2019.01.095"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2019.01.095", "name": "item", "description": "10.1016/j.scitotenv.2019.01.095", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2019.01.095"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-04-01T00:00:00Z"}}, {"id": "10.1007/s11104-019-04308-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:53Z", "type": "Journal Article", "created": "2019-12-06", "title": "Significance of root hairs at the field scale \u2013 modelling root water and phosphorus uptake under different field conditions", "description": "Abstract Background and aimsRoot hairs play a significant role in phosphorus (P) extraction at the pore scale. However, their importance at the field scale remains poorly understood.
MethodsThis study uses a continuum model to explore the impact of root hairs on the large-scale uptake of P, comparing root hair influence under different agricultural scenarios. High vs low and constant vs decaying P concentrations down the soil profile are considered, along with early vs late precipitation scenarios.
ResultsSimulation results suggest root hairs accounted for 50% of total P uptake by plants. Furthermore, a delayed initiation time of precipitation potentially limits the P uptake rate by over 50% depending on the growth period. Despite the large differences in the uptake rate, changes in the soil P concentration in the domain due to root solute uptake remains marginal when considering a single growth season. However, over the duration of 6\uffc2\uffa0years, simulation results showed that noticeable differences arise over time.
ConclusionRoot hairs are critical to P capture, with uptake efficiency potentially enhanced by coordinating irrigation with P application during earlier growth stages of crops.
", "keywords": ["/dk/atira/pure/subjectarea/asjc/1100/1111", "0106 biological sciences", "330", "550", "EP/M020355/1", "ERC 646809 DIMR", "QH301 Biology", "/dk/atira/pure/subjectarea/asjc/1100/1110", "Soil Science", "A. B", "Field", "610", "Plant Science", "01 natural sciences", "NERC NE/L00237/1", "QH301", "Soil", "Plant roots", "Root hairs", "BBSRC SARIC BB/P004180/", "2. Zero hunger", "BBSRC SARISA BB/L025620/1. S. D.", "Mathematical modelling", "Natural Environment Research Council (NERC)", "name=Soil Science", "Water", "Phosphorus", "Regular Article", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water", "Engineering and Physical Sciences Research Council (EPSRC)", "Rhizosphere", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "name=Plant Science", "European Research Council"]}, "links": [{"href": "https://eprints.soton.ac.uk/434043/1/Manuscript_No_Tracked_Changes.pdf"}, {"href": "http://link.springer.com/content/pdf/10.1007/s11104-019-04308-2.pdf"}, {"href": "https://doi.org/10.1007/s11104-019-04308-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-019-04308-2", "name": "item", "description": "10.1007/s11104-019-04308-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-019-04308-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-06T00:00:00Z"}}, {"id": "10.1007/s11356-013-2321-6", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:57Z", "type": "Journal Article", "created": "2013-12-02", "title": "Interactive Effects Of Different Inorganic As And Se Species On Their Uptake And Translocation By Rice (Oryza Sativa L.) Seedlings", "description": "There is a lack of information on the interactive relationship of absorption and transformation between two inorganic arsenic (As) species and two inorganic selenium (Se) species in rice grown under hydroponic condition. Interactive effects of inorganic As (As(III)) and (As(V)) and Se (Se(IV)and Se(VI)) species on their uptake, accumulation, and translocation in rice (Oryza sativa L.) seedlings were investigated in hydroponic culture. The results clearly showed the interactive effects of inorganic As and Se on their uptake by rice. The presence of Se reduced the sum of As species in the rice shoots regardless of Se speciation. If Se is present as Se(IV), then is it is accompanied by a corresponding increase of the sum of As species, but if Se is present as Se(VI), then there is no change in the sum of As species in rice roots. These effects are observed regardless of initial As speciation. When the rice plants are exposed to Se(IV), the presence of As increases the sum of Se species in the roots, and decreases the sum of Se species in the corresponding shoots. This effect is more pronounced for As(III) than for As(V). There is no effect on Se during exposure to Se(VI). Co-existence of As also increased SeMet in rice roots.", "keywords": ["0106 biological sciences", "Oryza", "04 agricultural and veterinary sciences", "Plant Roots", "01 natural sciences", "Arsenic", "Selenium", "Hydroponics", "Seedlings", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Drug Interactions", "Environmental Pollutants", "Plant Shoots"], "contacts": [{"organization": "Yi-Zong Huang, Gui-Lan Duan, Yunxia Liu, Ying Hu, Guo-Xin Sun,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s11356-013-2321-6"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20and%20Pollution%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11356-013-2321-6", "name": "item", "description": "10.1007/s11356-013-2321-6", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11356-013-2321-6"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-12-03T00:00:00Z"}}, {"id": "10.1007/s11538-017-0350-x", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-25T16:15:01Z", "type": "Journal Article", "created": "2017-10-13", "title": "An Explicit Structural Model of Root Hair and Soil Interactions Parameterised by Synchrotron X-ray Computed Tomography", "description": "The rhizosphere is a zone of fundamental importance for understanding the dynamics of nutrient acquisition by plant roots. The canonical difficulty of experimentally investigating the rhizosphere led long ago to the adoption of mathematical models, the most sophisticated of which now incorporate explicit representations of root hairs and rhizosphere soil. Mathematical upscaling regimes, such as homogenisation, offer the possibility of incorporating into larger-scale models the important mechanistic processes occurring at the rhizosphere scale. However, we lack concrete descriptions of all the features required to fully parameterise models at the rhizosphere scale. By combining synchrotron X-ray computed tomography (SRXCT) and a novel root growth assay, we derive a three-dimensional description of rhizosphere soil structure suitable for use in multi-scale modelling frameworks. We describe an approach to mitigate sub-optimal root hair detection via structural root hair growth modelling. The growth model is explicitly parameterised with SRXCT data and simulates three-dimensional root hair ideotypes in silico, which are suitable for both ideotypic analysis and parameterisation of 3D geometry in mathematical models. The study considers different hypothetical conditions governing root hair interactions with soil matrices, with their respective effects on hair morphology being compared between idealised and image-derived soil/root geometries. The studies in idealised geometries suggest that packing arrangement of soil affects hair tortuosity more than the particle diameter. Results in field-derived soil suggest that hair access to poorly mobile nutrients is particularly sensitive to the physical interaction between the growing hairs and the phase of the soil in which soil water is present (i.e. the hydrated textural phase). The general trends in fluid-coincident hair length with distance from the root, and their dependence on hair/soil interaction mechanisms, are conserved across Cartesian and cylindrical geometries.", "keywords": ["2. Zero hunger", "0301 basic medicine", "0303 health sciences", "Mathematical Concepts", "15. Life on land", "Models", " Biological", "Plant Roots", "Soil", "03 medical and health sciences", "Imaging", " Three-Dimensional", "Rhizosphere", "Original Article", "Computer Simulation", "Tomography", " X-Ray Computed", "Synchrotrons"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s11538-017-0350-x.pdf"}, {"href": "https://doi.org/10.1007/s11538-017-0350-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bulletin%20of%20Mathematical%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11538-017-0350-x", "name": "item", "description": "10.1007/s11538-017-0350-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11538-017-0350-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-10-13T00:00:00Z"}}, {"id": "10.1016/j.chemosphere.2003.10.005", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:39Z", "type": "Journal Article", "created": "2003-11-17", "title": "Heavy Metal Accumulation By Nicotiana Glauca Graham In A Solid Waste Disposal Site", "description": "Nicotiana glauca Graham, is the only perennial shrub growing in a solid waste contaminated site in the Negev desert of Israel. The concentration of heavy metals (Cu, Fe, Mn, Zn, Ni, Cd and Pb) in the upper soil layer was significantly higher (p<0.01) than in non-contaminated desert soil. In root and shoot of N. glauca, growing in the site, the concentration of Cu, Zn and Fe was significantly higher (p<0.05) than in plants of a non-contaminated site. In a controlled experiment, the concentrations of Zn and Cu in root of plants grown, in a mixture of contaminated and non-contaminated soil (1:1) was 9.5 and 4.7 higher than that of plants grown in non-contaminated soil, respectively. While Zn was accumulated in shoot of plants grown in contaminated soil (531 mgkg(-1)) in significantly higher concentration than in plants grown in non-contaminated soil (56 mgkg(-1)), no significant differences were found in Cu accumulation. Growth of N. glauca was inhibited on contaminated soil, but no other obvious stress symptoms were apparent. Therefore, long term experiments under controlled conditions are planned to study the mechanism of heavy metal tolerance and accumulation in N. glauca.", "keywords": ["Nicotiana", "0106 biological sciences", "Soil", "Metals", " Heavy", "Biomass", "Israel", "Plant Roots", "01 natural sciences", "6. Clean water", "Refuse Disposal", "0105 earth and related environmental sciences", "12. Responsible consumption"], "contacts": [{"organization": "Oz Barazani, P. Sathiyamoorthy, Uttam Manandhar, Raya Vulkan, Avi Golan-Goldhirsh,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.chemosphere.2003.10.005"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Chemosphere", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.chemosphere.2003.10.005", "name": "item", "description": "10.1016/j.chemosphere.2003.10.005", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.chemosphere.2003.10.005"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-02-01T00:00:00Z"}}, {"id": "10.1016/j.cell.2021.04.024", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:39Z", "type": "Journal Article", "created": "2021-05-18", "title": "Innovation, conservation, and repurposing of gene function in root cell type development", "description": "Plant species have evolved myriads of solutions, including complex cell type development and regulation, to adapt to dynamic environments. To understand this cellular diversity, we profiled tomato root cell type translatomes. Using xylem differentiation in tomato, examples of functional innovation, repurposing, and conservation of transcription factors are described, relative to the model plant Arabidopsis. Repurposing and innovation of genes are further observed within an exodermis regulatory network and illustrate its function. Comparative translatome analyses of rice, tomato, and Arabidopsis cell populations suggest increased expression conservation of root meristems compared with other homologous populations. In addition, the functions of constitutively expressed genes are more conserved than those of cell type/tissue-enriched genes. These observations suggest that higher order properties of cell type and pan-cell type regulation are evolutionarily conserved between plants and animals.", "keywords": ["root development", "translatomes", "General Biochemistry", "Genetics and Molecular Biology", "Green Fluorescent Proteins", "Meristem", "Arabidopsis", "cell types; evolution; exodermis; gene regulation; rice; root development; tomato; translatomes; xylem", "tomato", "xylem", "Genes", " Plant", "Plant Roots", "Inventions", "Solanum lycopersicum", "Species Specificity", "Gene Expression Regulation", " Plant", "Xylem", "evolution", "Gene Regulatory Networks", "Promoter Regions", " Genetic", "Plant Proteins", "2. Zero hunger", "exodermis", "rice", "15. Life on land", "Protein Biosynthesis", "cell types", "gene regulation", "Transcription Factors"]}, "links": [{"href": "https://www.research.unipd.it/bitstream/11577/3392826/2/PIIS0092867421005043.pdf"}, {"href": "https://doi.org/10.1016/j.cell.2021.04.024"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Cell", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.cell.2021.04.024", "name": "item", "description": "10.1016/j.cell.2021.04.024", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.cell.2021.04.024"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-06-01T00:00:00Z"}}, {"id": "10.1016/j.chemosphere.2009.01.042", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:40Z", "type": "Journal Article", "created": "2009-02-16", "title": "Effects Of Earthworms On Metal Uptake Of Heavy Metals From Polluted Mine Soils By Different Crop Plants", "description": "A pot experiment was conducted in order to assess the effect of the earthworm Eisenia fetida on the uptake of Pb, Zn, Cd and Cu from soils polluted by mining activities using maize (Zea mays) and barley (Hordeum vulgare). Results from single and sequential extractions showed that the soil chemical partitioning of heavy metals was significantly changed by E. fetida, leading to a higher concentration of metals in the non-residual fractions of the soil. Earthworm activities significantly increased shoot biomass (65% for maize and 73% for barley) and root metal concentration for all the metals under study in both maize and barley. The total accumulation rate values for Cd, Cu, Pb and Zn were significantly higher in the presence of E. fetida for both crop plants. Those latter effects led to an increase in Zn extraction yields of up to 3.7-fold and 2.3-fold for barley and maize, respectively.", "keywords": ["2. Zero hunger", "Hordeum", "04 agricultural and veterinary sciences", "Chemical Fractionation", "Plant Roots", "Zea mays", "01 natural sciences", "Mining", "Biodegradation", " Environmental", "13. Climate action", "Metals", " Heavy", "Animals", "Soil Pollutants", "0401 agriculture", " forestry", " and fisheries", "Biomass", "Oligochaeta", "Plant Shoots", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.chemosphere.2009.01.042"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Chemosphere", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.chemosphere.2009.01.042", "name": "item", "description": "10.1016/j.chemosphere.2009.01.042", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.chemosphere.2009.01.042"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-05-01T00:00:00Z"}}, {"id": "10.1016/j.chemosphere.2006.12.071", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:40Z", "type": "Journal Article", "created": "2007-02-21", "title": "The Copper Tolerance Strategies And The Role Of Antioxidative Enzymes In Three Plant Species Grown On Copper Mine", "description": "This study was undertaken to identify the strategies and the status of antioxidant enzyme activities involved in three plant species tolerance against Cu-toxicity in copper mine. The following methods were used for evaluations in three wild type species; Datura stramonium, Malva sylvestris and Chenopodium ambrosioides. The level of chlorophyll and the activities of superoxide dismutase (SOD), glutathione peroxidase (GPX) and catalase (CAT) by spectrometry, malondialdehyde (MDA) and dityrosine by HPLC and the levels of Cu in tissues and soils by atomic absorption spectrometry (AAS). Analysis showed that total and available copper were at toxic levels for plants growing on contaminated soil (zone 1). However, there were not any visual and conspicuous symptoms of Cu toxicity in plant species. Among three species, excess copper was transferred only into the D. stramonium and C. ambrosioides tissues. The C. ambrosioides accumulated Cu in roots and then in leaves, in which the leaves chloroplasts stored Cu around two times of vacuoles. In D. stramonium most of Cu was accumulated in leaves in which the storage rate in vacuoles and chloroplasts were 42% and 8%, respectively. In zone 1, the chlorophyll levels increased significantly in leaves of C. ambrosioides with respect to the same plant growing on uncontaminated soil (zone 2). There was insignificant decrease in chlorophyll content of D. stramonium leaves, collected from zone 1 with respect to zone 2. The D. stramonium and C. ambrosioides in zone 1, both revealed significant increase in their tissues antioxidant enzyme activities in comparison with the same samples of zone 2. There was significant elevation in oxidative damage biomarkers; MDA and dityrosine, when the aerial parts of D. stramonium in zone 1 were compared with the same parts of zone 2. We concluded that there were different tolerance strategies in studied plant species that protected them against copper toxicity. In M. sylvestris, exclusion of Cu from the roots or its stabilization in the soil restricted Cu toxicity effects. On the other hand D. stramonium and C. ambrosioides, elevated their antioxidative enzyme activities in response to cu-toxicity. In addition, the species D. stramonium accumulated excess of Cu in leaves vacuoles.", "keywords": ["Chlorophyll", "0106 biological sciences", "0301 basic medicine", "Chloroplasts", "Malva", "Plants", "15. Life on land", "Lipid Metabolism", "Plant Roots", "01 natural sciences", "Antioxidants", "Mining", "6. Clean water", "Chenopodium", "Oxidative Stress", "Soil", "03 medical and health sciences", "Malondialdehyde", "Vacuoles", "Datura", "Tyrosine", "Biomass", "Copper", "Plant Proteins"], "contacts": [{"organization": "Massod Mashhadi Akbar Boojar, Faranak Goodarzi,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.chemosphere.2006.12.071"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Chemosphere", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.chemosphere.2006.12.071", "name": "item", "description": "10.1016/j.chemosphere.2006.12.071", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.chemosphere.2006.12.071"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-05-01T00:00:00Z"}}, {"id": "10.1016/j.ecoleng.2017.08.010", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:45Z", "type": "Journal Article", "created": "2017-11-27", "title": "Sensitivity of the landslide model LAPSUS_LS to vegetation and soil parameters", "description": "Open Access\u0625\u0646 \u062a\u0623\u062b\u064a\u0631 \u0627\u0644\u063a\u0637\u0627\u0621 \u0627\u0644\u0646\u0628\u0627\u062a\u064a \u0639\u0644\u0649 \u0627\u0633\u062a\u0642\u0631\u0627\u0631 \u0627\u0644\u0645\u0646\u062d\u062f\u0631\u0627\u062a \u0645\u0641\u0647\u0648\u0645 \u062c\u064a\u062f\u064b\u0627 \u0639\u0644\u0649 \u0645\u0633\u062a\u0648\u0649 \u0627\u0644\u0645\u0646\u062d\u062f\u0631\u0627\u062a\u060c \u0644\u0643\u0646 \u0627\u0644\u0627\u0631\u062a\u0642\u0627\u0621 \u0625\u0644\u0649 \u0645\u0633\u062a\u0648\u0649 \u0645\u0633\u062a\u062c\u0645\u0639\u0627\u062a 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\u0627\u0644\u0632\u0631\u0627\u0639\u0629 \u0627\u0644\u0645\u062e\u062a\u0644\u0637\u0629 \u0644\u0644\u0628\u0646 \u0648\u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0639\u0644\u0649 \u0627\u0644\u0645\u0646\u062d\u062f\u0631\u0627\u062a\u060c \u0644\u0643\u0646 \u0627\u0644\u0632\u0631\u0627\u0639\u0629 \u0627\u0644\u0623\u062d\u0627\u062f\u064a\u0629 \u0644\u0644\u0628\u0646 \u0643\u0627\u0646\u062a \u063a\u064a\u0631 \u0645\u0633\u062a\u0642\u0631\u0629 \u0644\u0644\u063a\u0627\u064a\u0629\u060c \u0644\u0623\u0646 \u062a\u0642\u0648\u064a\u0629 \u0627\u0644\u062c\u0630\u0631 \u0643\u0627\u0646\u062a \u0645\u0646\u062e\u0641\u0636\u0629 \u0639\u0644\u0649 \u0639\u0645\u0642 1.5 \u0645\u062a\u0631. \u0643\u0627\u0646 \u0644\u0646\u0642\u0644 \u0627\u0644\u062a\u0631\u0628\u0629 \u062a\u0623\u062b\u064a\u0631 \u0645\u062d\u062f\u0648\u062f \u0639\u0644\u0649 \u0627\u0644\u0646\u062a\u0627\u0626\u062c \u0645\u0642\u0627\u0631\u0646\u0629 \u0628\u0627\u0644\u0643\u062b\u0627\u0641\u0629 \u0627\u0644\u0633\u0627\u0626\u0628\u0629 \u0648\u0632\u0627\u0648\u064a\u0629 \u0627\u0644\u0627\u062d\u062a\u0643\u0627\u0643 \u0627\u0644\u062f\u0627\u062e\u0644\u064a. \u0644\u0645 \u064a\u0643\u0646 \u0644\u0644\u0631\u0633\u0648\u0645 \u0627\u0644\u0625\u0636\u0627\u0641\u064a\u0629 \u0644\u0644\u0643\u062a\u0644\u0629 \u0627\u0644\u062d\u064a\u0648\u064a\u0629 \u0623\u064a \u062a\u0623\u062b\u064a\u0631 \u0643\u0628\u064a\u0631 \u0639\u0644\u0649 \u0639\u0645\u0644\u064a\u0627\u062a \u0627\u0644\u0645\u062d\u0627\u0643\u0627\u0629. \u0641\u064a \u0627\u0644\u062e\u062a\u0627\u0645\u060c \u0627\u0633\u062a\u062c\u0627\u0628\u062a LAPSUS_LS \u0628\u0634\u0643\u0644 \u062c\u064a\u062f \u0644\u0628\u064a\u0627\u0646\u0627\u062a \u0645\u062f\u062e\u0644\u0627\u062a \u0627\u0644\u062a\u0631\u0628\u0629 \u0648\u0627\u0644\u063a\u0637\u0627\u0621 \u0627\u0644\u0646\u0628\u0627\u062a\u064a\u060c \u0648\u0647\u064a \u0645\u0631\u0634\u062d \u0645\u0646\u0627\u0633\u0628 \u0644\u0646\u0645\u0630\u062c\u0629 \u0627\u0633\u062a\u0642\u0631\u0627\u0631 \u0627\u0644\u0645\u0646\u062d\u062f\u0631\u0627\u062a \u0627\u0644\u0646\u0628\u0627\u062a\u064a\u0629 \u0639\u0644\u0649 \u0645\u0633\u062a\u0648\u0649 \u0645\u0633\u062a\u062c\u0645\u0639\u0627\u062a \u0627\u0644\u0645\u064a\u0627\u0647.", "keywords": ["Cohesion (chemistry)", "http://aims.fao.org/aos/agrovoc/c_27199", "http://aims.fao.org/aos/agrovoc/c_4915", "F08 - Syst\u00e8mes et modes de culture", "[SDV]Life Sciences [q-bio]", "culture associ\u00e9e", "http://aims.fao.org/aos/agrovoc/c_1920", "FOS: Mechanical engineering", "Organic chemistry", "Plant Science", "02 engineering and technology", "Erythrina poeppigiana", "01 natural sciences", "630", "Mechanical Effects of Plant Roots on Slope Stability", "stabilisation du sol", "Agricultural and Biological Sciences", "Soil", "monoculture", "Engineering", "enracinement", "couverture du sol", "m\u00e9thode statistique", "Pathology", "Monoculture", "http://aims.fao.org/aos/agrovoc/c_1721", "http://aims.fao.org/aos/agrovoc/c_2018", "http://aims.fao.org/aos/agrovoc/c_24199", "http://aims.fao.org/aos/agrovoc/c_35927", "U10 - Informatique", " math\u00e9matiques et statistiques", "Susceptibility Mapping", "Life Sciences", "Hydrology (agriculture)", "Geology", "Coffea arabica", "[SDV] Life Sciences [q-bio]", "Chemistry", "Landslide", "Plant Responses to Flooding Stress", "Slope Stability", "Physical Sciences", "http://aims.fao.org/aos/agrovoc/c_6649", "Medicine", "Vegetation (pathology)", "http://aims.fao.org/aos/agrovoc/c_7377", "http://aims.fao.org/aos/agrovoc/c_7171", "0207 environmental engineering", "Soil Science", "Management", " Monitoring", " Policy and Law", "Transmissivity", "Environmental science", "mod\u00e8le math\u00e9matique", "FOS: Mathematics", "http://aims.fao.org/aos/agrovoc/c_12676", "http://aims.fao.org/aos/agrovoc/c_37897", "Landslide Hazards and Risk Assessment", "pratique culturale", "Biology", "0105 earth and related environmental sciences", "P36 - \u00c9rosion", " conservation et r\u00e9cup\u00e9ration des sols", "Soil science", "montagne", "Mechanical Engineering", "Slope stability", "Modeling", "Botany", "FOS: Earth and related environmental sciences", "15. Life on land", "Roots", "Bulk density", "Agronomy", "Geotechnical engineering", "13. Climate action", "Environmental Science", "Cohesion", "Mathematics"]}, "links": [{"href": "https://doi.org/10.1016/j.ecoleng.2017.08.010"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Engineering", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ecoleng.2017.08.010", "name": "item", "description": "10.1016/j.ecoleng.2017.08.010", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ecoleng.2017.08.010"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-12-01T00:00:00Z"}}, {"id": "10.1016/j.gde.2018.03.007", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:13Z", "type": "Journal Article", "created": "2018-04-16", "title": "Micromechanics of root development in soil", "description": "Our understanding of how roots develop in soil may be at the eve of significant transformations. The formidable expansion of imaging technologies enables live observations of the rhizosphere micro-pore architecture at unprecedented resolution. Granular matter physics provides ways to understand the microscopic fluctuations of forces in soils, and the increasing knowledge of plant mechanobiology may shed new lights on how roots perceive soil heterogeneity. This opinion paper exposes how recent scientific achievements may contribute to refresh our views on root growth in heterogeneous environments.", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "/dk/atira/pure/subjectarea/asjc/1300/1311", "name=Genetics", "15. Life on land", "Plant Roots", "name=Developmental Biology", "Genetic Heterogeneity", "Soil", "03 medical and health sciences", "13. Climate action", "Rhizosphere", "/dk/atira/pure/subjectarea/asjc/1300/1309", "Mechanical Phenomena"]}, "links": [{"href": "https://doi.org/10.1016/j.gde.2018.03.007"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Current%20Opinion%20in%20Genetics%20%26amp%3B%20Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.gde.2018.03.007", "name": "item", "description": "10.1016/j.gde.2018.03.007", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.gde.2018.03.007"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-08-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2005.02.002", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-05-25T16:15:55Z", "type": "Journal Article", "created": "2005-04-07", "title": "Effects Of Simultaneous Ozone Exposure And Nitrogen Loads On Carbohydrate Concentrations, Biomass, And Growth Of Young Spruce Trees (Picea Abies)", "description": "Spruce saplings were grown under different nitrogen fertilization regimes in eight chamberless fumigation systems, which were fumigated with either charcoal-filtered (F) or ambient air (O3). After the third growing season trees were harvested for biomass and non-structural carbohydrate analysis. Nitrogen had an overall positive effect on the investigated plant parameters, resulting in increased shoot elongation, biomass production, fine root soluble carbohydrate concentrations, and also slightly increased starch concentrations of stems and roots. Only needle starch concentrations and fine root sugar alcohol concentrations were decreased. Ozone fumigation resulted in needle discolorations and affected most parameters negatively, including decreased shoot elongation and decreased starch concentrations in roots, stems, and needles. In fine roots, however, soluble carbohydrate concentrations remained unaffected or increased by ozone fumigation. The only significant interaction was an antagonistic effect on root starch concentrations, where higher nitrogen levels alleviated the negative impact of ozone.", "keywords": ["Air Pollutants", "Ecology", "Plant Stems", "Nitrogen", "Carbohydrates", "04 agricultural and veterinary sciences", "15. Life on land", "Plant Roots", "01 natural sciences", "Plant Leaves", "Ozone", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Biomass", "Picea", "Fertilizers", "0105 earth and related environmental sciences"], "contacts": [{"organization": "V.F.D. Thomas, Walter Fl\u00fcckiger, Sabine Braun,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2005.02.002"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2005.02.002", "name": "item", "description": "10.1016/j.envpol.2005.02.002", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2005.02.002"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-10-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2006.06.002", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:55Z", "type": "Journal Article", "created": "2006-09-29", "title": "Growth Of Lygeum Spartum In Acid Mine Tailings: Response Of Plants Developed From Seedlings, Rhizomes And At Field Conditions", "description": "Lygeum spartum is a native species in semiarid Mediterranean areas that grows spontaneously on acid mine tailings. We aimed to study the suitability of this plant for phytostabilization. L. spartum was grown from both seeds and rhizomes in acid mine tailings with various fertilizer and lime treatments. Untreated soils had a solution pH of 2.9 with high concentrations of dissolved salts (Electrical Conductivity 25 dS m(-1)) and Zn (3100 mg L(-1)). Plants grown on untreated soil had high shoot metal concentrations (>4000 mg kg(-1)Zn). Liming increased the solution pH to 5.5 and reduced the dissolved salts by more than 75%, resulting in lower shoot metal accumulation. Plants grown from rhizomes accumulated less metal than those grown from seeds. Plants collected in the field had metal concentrations an order of magnitude less than plants raised in the growth chamber. These differences may be due to the higher moisture content and homogeneous nature of the soils used in the pot experiment.", "keywords": ["Anions", "Waste Products", "Oxides", "04 agricultural and veterinary sciences", "Calcium Compounds", "Hydrogen-Ion Concentration", "15. Life on land", "Poaceae", "Plant Roots", "01 natural sciences", "Mining", "Plant Leaves", "Soil", "Zinc", "Seedlings", "Cations", "Metals", " Heavy", "Soil Pollutants", "0401 agriculture", " forestry", " and fisheries", "Fertilizers", "Plant Shoots", "Rhizome", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2006.06.002"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2006.06.002", "name": "item", "description": "10.1016/j.envpol.2006.06.002", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2006.06.002"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-02-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2006.10.013", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:55Z", "type": "Journal Article", "created": "2006-12-01", "title": "Behavior Of Trifolium Repens And Lolium Perenne Growing In A Heavy Metal Contaminated Field: Plant Metal Concentration And Phytotoxicity", "description": "The use of a vegetation cover for the management of heavy metal contaminated soils needs prior investigations on the plant species the best sustainable. In this work, behaviors of Trifolium repens and Lolium perenne, growing in a metal-polluted field located near a closed lead smelter, were investigated through Cd, Pb and Zn-plant metal concentrations and their phytotoxicity. In these plant species, metals were preferentially accumulated in roots than in shoots, as follow: Cd>Zn>Pb. Plant exposure to such metals induced oxidative stress in the considered organs as revealed by the variations in malondialdehyde levels and superoxide dismutase activities. These oxidative changes were closely related to metal levels, plant species and organs. Accordingly, L. perenne seemed to be more affected by metal-induced oxidative stress than T. repens. Taken together, these findings allow us to conclude that both the plant species could be suitable for the phytomanagement of metal-polluted soils.", "keywords": ["Superoxide Dismutase", "Environmental Exposure", "04 agricultural and veterinary sciences", "15. Life on land", "Plant Roots", "01 natural sciences", "Oxidative Stress", "Soil", "Zinc", "Biodegradation", " Environmental", "Lead", "Malondialdehyde", "Metals", " Heavy", "Lolium", "Soil Pollutants", "0401 agriculture", " forestry", " and fisheries", "Trifolium", "Plant Shoots", "Cadmium", "Environmental Monitoring", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2006.10.013"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2006.10.013", "name": "item", "description": "10.1016/j.envpol.2006.10.013", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2006.10.013"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-06-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2007.06.018", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-05-25T16:15:55Z", "type": "Journal Article", "created": "2007-07-26", "title": "Contribution Of Heavy Metals And As-Loaded Lupin Root Mineralization To The Availability Of The Pollutants In Multi-Contaminated Soils", "description": "White lupin (Lupinus albus L.) is an annual crop that has been used for phytostabilization of acidified multi-contaminated soils. Once the culture cycle is over, after shoot harvesting, a progressive transference of contaminants from roots to soil may take place as decomposition of roots occurs. An incubation experiment with Cu, Zn, Cd, and As-loaded roots of white lupin and soils with different pH values and concentrations of these contaminants from the area affected by a mine spill at Aznalc\u00f3llar (near Seville, Spain) was performed in order to assess the effect of the decomposition of the roots to the pH and (NH4)2SO4-extractable levels of these pollutants in the soils. Pollutants loaded-roots were mineralized (56 d) at a ratio similar to animal manures (15.8-19.4% of total organic carbon) in soil. The estimated root inputs of contaminants in comparison to their extractable concentrations in soil were high, especially in the control, non-contaminated and neutral contaminated soils. However, the extractable concentrations of the toxic elements in the soil were mainly governed by soil pH. Hence, the correction and maintenance of the soil pH within the range 5-6 after lupin culture is essential for long-time phytostabilization of acidified multi-contaminated soils.", "keywords": ["2. Zero hunger", "Hydrogen-Ion Concentration", "15. Life on land", "Plant Roots", "01 natural sciences", "Mining", "6. Clean water", "Arsenic", "Lupinus", "Zinc", "Biodegradation", " Environmental", "Spain", "13. Climate action", "Metals", " Heavy", "Soil Pollutants", "Copper", "Humic Substances", "Cadmium", "Environmental Monitoring", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2007.06.018"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2007.06.018", "name": "item", "description": "10.1016/j.envpol.2007.06.018", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2007.06.018"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-03-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2010.11.032", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:56Z", "type": "Journal Article", "created": "2010-12-29", "title": "Lumbricus Terrestris L. Activity Increases The Availability Of Metals And Their Accumulation In Maize And Barley", "description": "The effect of the earthworm Lumbricus terrestris L. on metal availability in two mining soils was assessed by means of chemical extraction methods and a pot experiment using crop plants. Results from single and sequential extractions showed that L. terrestris had a slight effect on metal fractionation in the studied soils: only metals bound to the soil organic matter were significantly increased in some cases. However, we found that L. terrestris significantly increased root, shoot and total Pb and Zn concentrations in maize and barley for the soil with the highest concentrations of total and available metals. Specifically, shoot Pb concentration was increased by a factor of 7.5 and 3.9 for maize and barley, respectively, while shoot Zn concentration was increased by a factor of 3.7 and 1.7 for maize and barley, respectively. Our results demonstrated that earthworm activity increases the bioavailability of metals in soils.", "keywords": ["2. Zero hunger", "Hordeum", "04 agricultural and veterinary sciences", "Chemical Fractionation", "15. Life on land", "Plant Roots", "Zea mays", "01 natural sciences", "Mining", "Soil", "Zinc", "Biodegradation", " Environmental", "Lead", "Spain", "Animals", "Soil Pollutants", "0401 agriculture", " forestry", " and fisheries", "Oligochaeta", "Plant Shoots", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2010.11.032"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2010.11.032", "name": "item", "description": "10.1016/j.envpol.2010.11.032", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2010.11.032"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-03-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2021.116897", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:57Z", "type": "Journal Article", "created": "2021-03-13", "title": "X-ray absorption spectroscopy evidence of sulfur-bound cadmium in the Cd-hyperaccumulator Solanum nigrum and the non-accumulator Solanum melongena", "description": "It has been proposed that non-protein thiols and organic acids play a major role in cadmium phytoavailability and distribution in plants. In the Cd-hyperaccumulator Solanum nigrum and non-accumulator Solanum melongena, the role of these organic ligands in the accumulation and detoxification mechanisms of Cd are debated. In this study, we used X-ray absorption spectroscopy to investigate Cd speciation in these plants (roots, stem, leaves) and in the soils used for their culture to unravel the plants responses to Cd exposure. The results show that Cd in the 100\u00a0mg\u00a0kg-1 Cd-doped clayey loam soil is sorbed onto iron oxyhydroxides. In both S.\u00a0nigrum and S.\u00a0melongena, Cd in roots and fresh leaves is mainly bound to thiol ligands, with a small contribution of inorganic S ligands in S.\u00a0nigrum leaves. We interpret the Cd binding to sulfur ligands as detoxification mechanisms, possibly involving the sequestration of Cd complexed with glutathione or phytochelatins in the plant vacuoles. In the stems, results show an increase binding of Cd to -O ligands (>50% for S.\u00a0nigrum). We suggest that Cd is partly complexed by organic acids for transportation in the sap.", "keywords": ["[SDE] Environmental Sciences", "0106 biological sciences", "570", "http://aims.fao.org/aos/agrovoc/c_28566", "cadmium", "http://aims.fao.org/aos/agrovoc/c_2219", "Speciation", "Plant Roots", "01 natural sciences", "[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics", "d\u00e9toxification", "Soil Pollutants", "http://aims.fao.org/aos/agrovoc/c_32389", "Solanum melongena", "http://aims.fao.org/aos/agrovoc/c_5383", "Solanaceae", "Solanum nigrum", "0105 earth and related environmental sciences", "580", "Toxicity", "thiol", "X-Ray absorption spectroscopy", "[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics", "http://aims.fao.org/aos/agrovoc/c_7731", "bioaccumulation", "Biodegradation", " Environmental", "X-Ray Absorption Spectroscopy", "acide organique", "http://aims.fao.org/aos/agrovoc/c_7218", "[SDE]Environmental Sciences", "http://aims.fao.org/aos/agrovoc/c_32250", "spectroscopie aux rayons x", "H50 - Troubles divers des plantes", "P02 - Pollution", "http://aims.fao.org/aos/agrovoc/c_1178", "Sulfur", "Cadmium"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2021.116897"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2021.116897", "name": "item", "description": "10.1016/j.envpol.2021.116897", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2021.116897"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-06-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2025.117299", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-25T16:16:20Z", "type": "Journal Article", "created": "2025-04-19", "title": "Synchrotron-based 3D X-ray computed tomography reveals root system architecture: Plastic responses to phosphorus placement", "description": "We used synchrotron-based X-ray computed tomography (SRXCT) to visualize root distribution in soil cores. X-ray CT is emerging as a leading technique to study plant roots, but SRXCT offers potential advantages compared with conventional X-ray sources, including producing X-rays of higher intensity that are collimated, monochromatic and tuneable; delivering high-resolution data whilst avoiding issues such as beam-hardening and source divergence. We demonstrate the suitability of SRXCT for observing the root system of wheat plants growing in two soils (Calcisol and Ultisol) in response to placement of different phosphorus fertilisers. To optimize scanning quality, we tested the use of an inverse \u2018mask\u2019 in front of the soil cores to achieve a more uniform attenuation along the sample, thereby avoiding saturation of the detector along the thinnest parts of the soil cores. Secondly, we developed a deep learning approach for segmentation and quantification of root length and diameter. Our results demonstrate the use of SRXCT as a tool for studying root system architecture in soil at high spatial resolution. The SRXCT method marks a new stride towards advancing our understanding of root structures in unprecedented detail, opening further avenues for exploring plant-soil interactions.", "keywords": ["X-ray computed tomography", "Image segmentation", "Plant roots", "Root system architecture", "Soil phosphorus", "Science", "Q", "Root distribution", "Synchrotron"]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2025.117299"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2025.117299", "name": "item", "description": "10.1016/j.geoderma.2025.117299", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2025.117299"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-01T00:00:00Z"}}, {"id": "10.1016/j.jbiomech.2016.04.023", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:25Z", "type": "Journal Article", "created": "2016-04-30", "title": "Mapping soil deformation around plant roots using in vivo 4D X-ray Computed Tomography and Digital Volume Correlation", "description": "The mechanical impedance of soils inhibits the growth of plant roots, often being the most significant physical limitation to root system development. Non-invasive imaging techniques have recently been used to investigate the development of root system architecture over time, but the relationship with soil deformation is usually neglected. Correlative mapping approaches parameterised using 2D and 3D image data have recently gained prominence for quantifying physical deformation in composite materials including fibre-reinforced polymers and trabecular bone. Digital Image Correlation (DIC) and Digital Volume Correlation (DVC) are computational techniques which use the inherent material texture of surfaces and volumes, captured using imaging techniques, to map full-field deformation components in samples during physical loading. Here we develop an experimental assay and methodology for four-dimensional, in vivo X-ray Computed Tomography (XCT) and apply a Digital Volume Correlation (DVC) approach to the data to quantify deformation. The method is validated for a field-derived soil under conditions of uniaxial compression, and a calibration study is used to quantify thresholds of displacement and strain measurement. The validated and calibrated approach is then demonstrated for an in vivo test case in which an extending maize root in field-derived soil was imaged hourly using XCT over a growth period of 19h. This allowed full-field soil deformation data and 3D root tip dynamics to be quantified in parallel for the first time. This fusion of methods paves the way for comparative studies of contrasting soils and plant genotypes, improving our understanding of the fundamental mechanical processes which influence root system development.", "keywords": ["0301 basic medicine", "Soil", "03 medical and health sciences", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "Four-Dimensional Computed Tomography", "15. Life on land", "Plant Roots", "Zea mays", "620", "Mechanical Phenomena"]}, "links": [{"href": "https://eprints.soton.ac.uk/394374/1/__filestore.soton.ac.uk_users_fh1d15_mydesktop_Keyes_et_al_Journal_of_Biomechaincs_Root_DVC_2016.pdf"}, {"href": "https://doi.org/10.1016/j.jbiomech.2016.04.023"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Biomechanics", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jbiomech.2016.04.023", "name": "item", "description": "10.1016/j.jbiomech.2016.04.023", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jbiomech.2016.04.023"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-06-01T00:00:00Z"}}, {"id": "10.1016/j.jhazmat.2009.12.035", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-05-25T16:16:29Z", "type": "Journal Article", "created": "2009-12-18", "title": "In Situ Phytostabilisation Of Heavy Metal Polluted Soils Using Lupinus Luteus Inoculated With Metal Resistant Plant-Growth Promoting Rhizobacteria", "description": "The aim of this work is the evaluation of metal phytostabilisation potential of Lupinus luteus inoculated with Bradyrhizobium sp. 750 and heavy metal resistant PGPRs (plant-growth promoting rhizobacteria), for in situ reclamation of multi-metal contaminated soil after a mine spill. Yellow lupines accumulated heavy metals mainly in roots (Cu, Cd and especially Pb were poorly translocated to shoots). This indicates a potential use of this plant in metal phytostabilisation. Furthermore, As accumulation was undetectable. On the other hand, zinc accumulation was 10-100 times higher than all other metals, both in roots and in shoots. Inoculation with Bradyrhizobium sp. 750 increased both biomass and nitrogen content, indicating that nitrogen fixation was effective in soils with moderate levels of contamination. Co-inoculation of lupines with a consortium of metal resistant PGPR (including Bradyrhizobium sp., Pseudomonas sp. and Ochrobactrum cytisi) produced an additional improvement of plant biomass. At the same time, a decrease in metal accumulation was observed, both in shoots and roots, which could be due to a protective effect exerted on plant rhizosphere. Our results indicate the usefulness of L. luteus inoculated with a bacterial consortium of metal resistant PGPRs as a method for in situ reclamation of metal polluted soils.", "keywords": ["Chemical Hazard Release", "15. Life on land", "Plant Roots", "01 natural sciences", "Mining", "6. Clean water", "Lupinus", "Biodegradation", " Environmental", "13. Climate action", "Metals", " Heavy", "Nitrogen Fixation", "Soil Pollutants", "Decontamination", "Rhizobium", "0105 earth and related environmental sciences"], "contacts": [{"organization": "Antonio J. Palomares, Antonio J. Palomares, M.A. Chamber-P\u00e9rez, Elo\u00edsa Pajuelo, Mohammed Dary,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.jhazmat.2009.12.035"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Hazardous%20Materials", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jhazmat.2009.12.035", "name": "item", "description": "10.1016/j.jhazmat.2009.12.035", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jhazmat.2009.12.035"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-05-01T00:00:00Z"}}, {"id": "10.1016/j.pbi.2017.05.005", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:34Z", "type": "Journal Article", "created": "2017-06-03", "title": "Small peptide signaling pathways modulating macronutrient utilization in plants", "description": "Root system architecture (RSA) and physiological functions define macronutrient uptake efficiency. Small signaling peptides (SSPs), that act in manners similar to hormones, and their cognate receptors transmit signals both locally and systemically. Several SSPs controlling morphological and physiological traits of roots have been identified to be associated with macronutrient uptake. Recent development in plant genome research has provided an avenue toward systems-based identification and prediction of additional SSPs. This review highlights recent studies on SSP pathways important for optimization of macronutrient uptake and provides new insights into the diversity of SSPs regulated in response to changes in macronutrient availabilities.", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "03 medical and health sciences", "Nitrogen", "Gene Expression", "Plants", "Peptides", "Plant Root Nodulation", "Plant Roots", "Signal Transduction"]}, "links": [{"href": "https://doi.org/10.1016/j.pbi.2017.05.005"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Current%20Opinion%20in%20Plant%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.pbi.2017.05.005", "name": "item", "description": "10.1016/j.pbi.2017.05.005", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.pbi.2017.05.005"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-10-01T00:00:00Z"}}, {"id": "10.1016/j.pbi.2023.102405", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:34Z", "type": "Journal Article", "created": "2023-06-26", "title": "Turning up the volume: How root branching adaptive responses aid water foraging", "description": "Access to water is critical for all forms of life. Plants primarily access water through their roots. Root traits such as branching are highly sensitive to water availability, enabling plants to adapt their root architecture to match soil moisture distribution. Lateral root adaptive responses hydropatterning and xerobranching ensure new branches only form when roots are in direct contact with moist soil. Root traits are also strongly influenced by atmospheric humidity, where a rapid drop leads to a promotion of root growth and branching. The plant hormones auxin and/or abscisic acid (ABA) play key roles in regulating these adaptive responses. We discuss how these signals are part of a novel 'water-sensing' mechanism that couples hormone movement with hydrodynamics to orchestrate root branching responses.", "keywords": ["2. Zero hunger", "Soil", "Plant Growth Regulators", "Water", "15. Life on land", "Plant Roots", "6. Clean water", "Abscisic Acid"]}, "links": [{"href": "https://doi.org/10.1016/j.pbi.2023.102405"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Current%20Opinion%20in%20Plant%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.pbi.2023.102405", "name": "item", "description": "10.1016/j.pbi.2023.102405", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.pbi.2023.102405"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-10-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2008.11.046", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:39Z", "type": "Journal Article", "created": "2008-12-20", "title": "How Nitrogen And Sulphur Addition, And A Single Drought Event Affect Root Phosphatase Activity In Phalaris Arundinacea", "description": "Conservation and restoration of fens and fen meadows often aim to reduce soil nutrients, mainly nitrogen (N) and phosphorus (P). The biogeochemistry of P has received much attention as P-enrichment is expected to negatively impact on species diversity in wetlands. It is known that N, sulphur (S) and hydrological conditions affect the biogeochemistry of P, yet their interactive effects on P-dynamics are largely unknown. Additionally, in Europe, climate change has been predicted to lead to increases in summer drought. We performed a greenhouse experiment to elucidate the interactive effects of N, S and a single drought event on the P-availability for Phalaris arundinacea. Additionally, the response of plant phosphatase activity to these factors was measured over the two year experimental period. In contrast to results from earlier experiments, our treatments hardly affected soil P-availability. This may be explained by the higher pH in our soils, hampering the formation of Fe-P or Fe-Al complexes. Addition of S, however, decreased the plants N:P ratio, indicating an effect of S on the N:P stoichiometry and an effect on the plant's P-demand. Phosphatase activity increased significantly after addition of S, but was not affected by the addition of N or a single drought event. Root phosphatase activity was also positively related to plant tissue N and P concentrations, plant N and P uptake, and plant aboveground biomass, suggesting that the phosphatase enzyme influences P-biogeochemistry. Our results demonstrated that it is difficult to predict the effects of wetland restoration, since the involved mechanisms are not fully understood. Short-term and long-term effects on root phosphatase activity may differ considerably. Additionally, the addition of S can lead to unexpected effects on the biogeochemistry of P. Our results showed that natural resource managers should be careful when restoring degraded fens or preventing desiccation of fen ecosystems.", "keywords": ["summer", "0106 biological sciences", "plant tissue", "550", "Sulphate induced enzyme activity", "phosphorus limitation", "plant", "sulfate", "drought", "deposition", "Plant Roots", "01 natural sciences", "nitrogen", "iron", "biogeochemistry", "Root-surface phosphatase", "SDG 13 - Climate Action", "Phalaris", "species richness", "phosphorus", "N:P stoichiometry", "manager", "Plant Proteins", "2. Zero hunger", "pH", "grasslands", "Phosphorus", "dynamics", "04 agricultural and veterinary sciences", "wetland", "6. Clean water", "enzyme activity", "stoichiometry", "Europe", "eutrophication", "climate change", "Nitrogen", "growth", "fresh-water wetlands", "phosphatase", "soil", "desiccation", "Stress", " Physiological", "N:P ratios", "greenhouse", "N:P rations", "Fertilizers", "580", "Phosphorus uptake", "ecosystem", "biomass", "species diversity", "carbon", "nutrient", "15. Life on land", "Phosphoric Monoester Hydrolases", "enzyme", "fertilization", "13. Climate action", "Wetlands", "sulfur", "0401 agriculture", " forestry", " and fisheries", "Sulfur"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2008.11.046"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2008.11.046", "name": "item", "description": "10.1016/j.scitotenv.2008.11.046", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2008.11.046"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-03-01T00:00:00Z"}}, {"id": "10.1016/j.plantsci.2019.110250", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:35Z", "type": "Journal Article", "created": "2019-09-04", "title": "The influence of grafting on crops\u2019 photosynthetic performance", "description": "In a near scenario of climate change where stress-derived limitations on crops' yield by affecting plant gas-exchange are expected, grafting may become a cheap and easy technique to improve crops photosynthetic performance and water-use efficiency. Inconsistent data of the effect of rootstocks over gas-exchange can be found in literature, being necessary an integrative analysis of the effect of grafting over photosynthetic parameters. With this aim, we present a compilation of the effect of graft on the net CO2 assimilation rate (AN) and other photosynthetic parameters across different species with agronomic interest. No differences were observed in any photosynthetic parameter between non-grafted and self-grafted plants under non-stress conditions. However, differences were found depending on the used rootstock, particularly for the intrinsic water-use efficiency (WUEi). We observed that variations in AN induced by rootstocks were related to changes in both diffusive and biochemical parameters. Under drought or salt stress, different photosynthetic performances were observed depending on the rootstock, although the high variability among studies promted to remarkable results. Overall, we observed that grafting can be a useful technique to improve plant photosynthetic performance, and therefore, crop yield and WUE, and that the rootstock selection for a target environment is determinant for the variations in photosynthesis.", "keywords": ["Crops", " Agricultural", "0106 biological sciences", "0301 basic medicine", "2. Zero hunger", "Salinity", "Scion", "Drought", "Water use efficiency", "Carbon Dioxide", "15. Life on land", "Plant Roots", "01 natural sciences", "Crop Production", "6. Clean water", "03 medical and health sciences", "Stress", " Physiological", "13. Climate action", "Rootstock", "Photosynthesis"]}, "links": [{"href": "https://doi.org/10.1016/j.plantsci.2019.110250"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.plantsci.2019.110250", "name": "item", "description": "10.1016/j.plantsci.2019.110250", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.plantsci.2019.110250"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-06-01T00:00:00Z"}}, {"id": "10.1016/j.plantsci.2023.111896", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:35Z", "type": "Journal Article", "created": "2023-10-12", "title": "Maize (Zea mays L.) root exudation profiles change in quality and quantity during plant development \u2013 A field study", "description": "Deciphering root exudate composition of soil-grown plants is considered a crucial step to better understand plant\u2013soil\u2013microbe interactions affecting plant growth performance. In this study, two genotypes of Zea mays L. (WT, rth3) differing in root hair elongation were grown in the field in two substrates (sand, loam) in custom-made, perforated columns inserted into the field plots. Root exudates were collected at different plant developmental stages (BBCH 14, 19, 59, 83) using a soil-hydroponic-hybrid exudation sampling approach. Exudates were characterized by LC-MS based non-targeted metabolomics, as well as by photometric assays targeting total dissolved organic carbon, soluble carbohydrates, proteins, amino acids, and phenolics. Results showed that plant developmental stage was the main driver shaping both the composition and quantity of exuded compounds. Carbon (C) exudation per plant increased with increasing biomass production over time, while C exudation rate per cm\u00b2 root surface area h\u22121 decreased with plant maturity. Furthermore, exudation rates were higher in the substrate with lower nutrient mobility (i.e., loam). Surprisingly, we observed higher exudation rates in the root hairless rth3 mutant compared to the root hair-forming WT sibling, though exudate metabolite composition remained similar. Our results highlight the impact of plant developmental stage on the plant\u2013soil\u2013microbe interplay.", "keywords": ["2. Zero hunger", "580", "Soil", "Genotype", "Metabolomics", "ddc:580", "15. Life on land", "Zea mays", "Plant Roots", "630", "Carbon"]}, "links": [{"href": "https://doi.org/10.1016/j.plantsci.2023.111896"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.plantsci.2023.111896", "name": "item", "description": "10.1016/j.plantsci.2023.111896", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.plantsci.2023.111896"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-01T00:00:00Z"}}, {"id": "10.1016/j.plantsci.2023.111919", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:35Z", "type": "Journal Article", "created": "2023-11-20", "title": "Phytosiderophore pathway response in barley exposed to iron, zinc or copper starvation", "description": "Efficient micronutrient acquisition is a critical factor in selecting micronutrient dense crops for human consumption. Enhanced exudation and re-uptake of metal chelators, so-called phytosiderophores, by roots of graminaceous plants has been implicated in efficient micronutrient acquisition. We compared PS biosynthesis and exudation as a response mechanism to either Fe, Zn or Cu starvation. Two barley (Hordeum vulgare L.) lines with contrasting micronutrient grain yields were grown hydroponically and PS exudation (LC-MS) and root gene expression (RNAseq) were determined after either Fe, Zn, or Cu starvation. The response strength of the PS pathway was micronutrient dependent and decreased in the order Fe >\u00a0Zn >\u00a0Cu deficiency. We observed a stronger expression of PS pathway genes and greater PS exudation in the barley line with large micronutrient grain yield suggesting that a highly expressed PS pathway might be an important trait involved in high micronutrient accumulation. In addition to several metal specific transporters, we also found that the expression of IRO2 and bHLH156 transcription factors was not only induced under Fe but also under Zn and Cu deficiency. Our study delivers important insights into the role of the PS pathway in the acquisition of different micronutrients.", "keywords": ["2. Zero hunger", "Phytosiderophore", "/dk/atira/pure/subjectarea/asjc/1300/1311", "/dk/atira/pure/subjectarea/asjc/1100/1102", "Root exudation", "name=Genetics", "Iron", "/dk/atira/pure/subjectarea/asjc/1100/1110", "Hordeum", "Copper deficiency", "Plant Roots", "630", "Mugineic acid", "name=Agronomy and Crop Science", "Zinc", "Barley", "Humans", "Micronutrients", "name=Plant Science", "Biofortification", "Copper"]}, "links": [{"href": "https://doi.org/10.1016/j.plantsci.2023.111919"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.plantsci.2023.111919", "name": "item", "description": "10.1016/j.plantsci.2023.111919", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.plantsci.2023.111919"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-02-01T00:00:00Z"}}, {"id": "10.1016/j.plaphy.2019.05.023", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-25T16:16:35Z", "type": "Journal Article", "created": "2019-05-29", "title": "The elemental composition of halophytes correlates with key morphological adaptations and taxonomic groups", "description": "Halophytes are crucial in the light of increasing soil salinization, yet our understanding of their chemical composition and its relationship to key morphological traits such as succulence or salt excretion is limited. This study targets this issue by exploring the relationship between the elemental composition of 108 plant species from saline environments in Iran and their eco-morphological traits and taxonomy. Leaves and/or photosynthetic shoots of individual species and soils were sampled and analyzed for 20 elements in plant samples and 5 major elements plus % gypsum content, pH, and EC in soil samples. Eu-halophytes and leaf- and stem-succulent and salt-recreting plants showed high concentrations of Na, S, and Mg and low concentrations of Ca and K. In contrast, pseudo-halophytes, facultative-halophytes and eury-hygro-halophytes, which often lack succulent shoots, showed low Na, S, and Mg and high Ca and K concentrations in their leaves. Clear patterns were identified among taxonomic families, with Chenopodiaceae and Plumbaginaceae having high Na and Mg and low Ca and K concentrations, Caryophyllaceae having high K, Poaceae having low Na, and Asteraceae, Boraginaceae, and Brassicaceae showing high foliar Ca concentrations. We conclude that the elemental composition of halophytes and pseudo-halophytes is related to salt-tolerance categories, eco-morphological types and respective taxonomic groups.", "keywords": ["Succulent halophytes", "0106 biological sciences", "0301 basic medicine", "Cytoplasm", "Salinity", "Persian Gulf", "Climate", "Chenopodiaceae", "Iran", "Plant Roots", "01 natural sciences", "Ionome", "Soil", "03 medical and health sciences", "Magnesium", "Recreting halophytes", "Ecosystem", "Phylogeny", "Geography", "Lake Urmia", "Salt-Tolerant Plants", "Hydrogen-Ion Concentration", "15. Life on land", "Adaptation", " Physiological", "Caryophyllales", "Plant Leaves", "Calcium", "Sulfur"]}, "links": [{"href": "https://doi.org/10.1016/j.plaphy.2019.05.023"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Physiology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.plaphy.2019.05.023", "name": "item", "description": "10.1016/j.plaphy.2019.05.023", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.plaphy.2019.05.023"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-08-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2013.05.035", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:40Z", "type": "Journal Article", "created": "2013-06-10", "title": "Impact Of Elevated Co2 And Temperature On Soil C And N Dynamics In Relation To Ch4 And N2o Emissions From Tropical Flooded Rice (Oryza Sativa L.)", "description": "A field experiment was carried out to investigate the impact of elevated carbon dioxide (CO2) (CEC, 550 \u03bcmol mol(-1)) and elevated CO2+elevated air temperature (CECT, 550 \u03bcmol mol(-1) and 2\u00b0C more than control chamber (CC)) on soil labile carbon (C) and nitrogen (N) pools, microbial populations and enzymatic activities in relation to emissions of methane (CH4) and nitrous oxide (N2O) in a flooded alluvial soil planted with rice cv. Naveen in open top chambers (OTCs). The labile soil C pools, namely microbial biomass C, readily mineralizable C, water soluble carbohydrate C and potassium permanganate oxidizable C were increased by 27, 23, 38 and 37% respectively under CEC than CC (ambient CO2, 394 \u03bcmol mol(-1)). The total organic carbon (TOC) in root exudates was 28.9% higher under CEC than CC. The labile N fractions were also increased significantly (29%) in CEC than CC. Methanogens and denitrifier populations in rhizosphere were higher under CEC and CECT. As a result, CH4 and N2O-N emissions were enhanced by 26 and 24.6% respectively, under CEC in comparison to open field (UC, ambient CO2, 394 \u03bcmol mol(-1)) on seasonal basis. The global warming potential (GWP) was increased by 25% under CEC than CC. However, emissions per unit of grain yield under elevated CO2 and temperature were similar to those observed at ambient CO2. The stimulatory effect on CH4 and N2O emissions under CEC was linked with the increased amount of soil labile C, C rich root exudates, lowered Eh, higher Fe(+2) concentration and increased activities of methanogens and extracellular enzymes.", "keywords": ["2. Zero hunger", "Tropical Climate", "Chromatography", " Gas", "Nitrogen", "Iron", "Nitrous Oxide", "Temperature", "India", "Agriculture", "Oryza", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "Global Warming", "Plant Roots", "Carbon", "6. Clean water", "Soil", "13. Climate action", "Rhizosphere", "Regression Analysis", "0401 agriculture", " forestry", " and fisheries", "Methane", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2013.05.035"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2013.05.035", "name": "item", "description": "10.1016/j.scitotenv.2013.05.035", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2013.05.035"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-09-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2017.02.229", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-05-25T16:16:41Z", "type": "Journal Article", "created": "2017-03-03", "title": "The Influence Of Tree Species On Small Scale Spatial Heterogeneity Of Soil Respiration In A Temperate Mixed Forest", "description": "Soil respiration is the largest terrestrial carbon flux into the atmosphere, and different tree species could directly influence root derived respiration and indirectly regulate soil respiration rates by altering soil chemical and microbial properties. In this study, we assessed the small scale spatial heterogeneity of soil respiration and the microbial community below the canopy of three dominant tree species (Korean pine (Pinus koraiensis), Mongolian oak (Quercus mongolica), and Manchuria ash (Fraxinus mandshurica)) in a temperate mixed forest in Northeast China. Soil respiration differed significantly during several months and increased in the order of oak