{"type": "FeatureCollection", "features": [{"id": "10.1016/j.jplph.2012.02.014", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:15:58Z", "type": "Journal Article", "created": "2012-04-24", "title": "Drought Stress Has Contrasting Effects On Antioxidant Enzymes Activity And Phenylpropanoid Biosynthesis In Fraxinus Ornus Leaves: An Excess Light Stress Affair?", "description": "The experiment was conducted using Fraxinus ornus plants grown outside under full sunlight irradiance, and supplied with 100% (well-watered, WW), 40% (mild drought, MD), or 20% (severe drought, SD) of the daily evapotranspiration demand, with the main objective of exploring the effect of excess light stress on the activity of antioxidant enzymes and phenylpropanoid biosynthesis. Net CO\u2082 assimilation rate at saturating light and daily assimilated CO\u2082 were significantly smaller in SD than in WW and MD plants. Xanthophyll-cycle pigments supported nonphotochemical quenching to a significantly greater extent in SD than in MD and WW leaves. As a consequence, the actual efficiency of PSII (\u03a6(PSII)) was smaller, while the excess excitation-energy in the photosynthetic apparatus was greater in SD than in WW or MD plants. The concentrations of violaxanthin-cycle pigments relative to total chlorophyll (Chl(tot)) exceeded 200 mmol mol\u207b\u00b9 Chl(tot) in SD leaves at the end of the experiment. This leads to hypothesize for zeaxanthin a role not only as nonphotochemical quencher, but also as chloroplast antioxidant. Reductions in ascorbate peroxidase and catalase activities, as drought-stress progressed, were paralleled by greater accumulations of esculetin and quercetin 3-O-glycosides, both phenylpropanoids having effective capacity to scavenge H\u2082O\u2082. The drought-induced accumulation of esculetin and quercetin 3-O-glycosides in the vacuoles of mesophyll cells is consistent with their putative functions as reducing agents for H\u2082O\u2082 in excess light-stressed leaves. Nonetheless, the concentration of H\u2082O\u2082 and the lipid peroxidation were significantly greater in SD than in MD and WW leaves. It is speculated that vacuolar phenylpropanoids may constitute a secondary antioxidant system, even on a temporal basis, activated upon the depletion of primary antioxidant defences, and aimed at keeping whole-cell H\u2082O\u2082 within a sub-lethal concentration range.", "keywords": ["0301 basic medicine", "Analysis of Variance", "Principal Component Analysis", "0303 health sciences", "Time Factors", "Light", "Propanols", "Antioxidant enzymes Drought stress Phenylpropanoids Water relations Violaxanthin-cycle pigments", "Hydrogen Peroxide", "Pigments", " Biological", "Carbon Dioxide", "15. Life on land", "Antioxidants", "6. Clean water", "Antioxidant enzymes; Drought stress; Phenylpropanoids; Violaxanthin-cycle pigments; Water relations; Analysis of Variance; Antioxidants; Carbon Dioxide; Fraxinus; Hydrogen Peroxide; Malondialdehyde; Mesophyll Cells; Microscopy", " Fluorescence; Photosynthesis; Pigments", " Biological; Plant Leaves; Principal Component Analysis; Propanols; Stress", " Physiological; Time Factors; Droughts; Light; Plant Science; Physiology; Agronomy and Crop Science", "Droughts", "Plant Leaves", "03 medical and health sciences", "Fraxinus", "Microscopy", " Fluorescence", "Stress", " Physiological", "Antioxidant enzymes; drought stress; flavonoids", "Malondialdehyde", "Photosynthesis", "Mesophyll Cells"]}, "links": [{"href": "https://doi.org/10.1016/j.jplph.2012.02.014"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Plant%20Physiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jplph.2012.02.014", "name": "item", "description": "10.1016/j.jplph.2012.02.014", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jplph.2012.02.014"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-07-01T00:00:00Z"}}, {"id": "10.1016/j.landusepol.2022.106065", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:15:58Z", "type": "Journal Article", "created": "2022-02-28", "title": "Expansion of olive orchards and their impact on the cultivation and landscape through a case study in the countryside of Cordoba (Spain)", "description": "Open Access\u062a\u0645 \u062a\u0639\u0632\u064a\u0632 \u0627\u0633\u062a\u062f\u0627\u0645\u0629 \u0627\u0644\u0646\u0638\u0645 \u0627\u0644\u0632\u0631\u0627\u0639\u064a\u0629 \u0645\u0646 \u062e\u0644\u0627\u0644 \u0627\u0644\u062a\u0634\u0631\u064a\u0639\u0627\u062a \u0639\u0644\u0649 \u0645\u0633\u062a\u0648\u064a\u0627\u062a \u0645\u062e\u062a\u0644\u0641\u0629\u060c \u0648\u0644\u0643\u0646 \u0641\u064a \u0627\u0644\u0648\u0642\u062a \u0646\u0641\u0633\u0647 \u062a\u0639\u0632\u0632 \u0647\u0630\u0647 \u0627\u0644\u0633\u064a\u0627\u0633\u0627\u062a \u0623\u064a\u0636\u064b\u0627 \u0623\u0646\u0638\u0645\u0629 \u0623\u0643\u062b\u0631 \u0625\u0646\u062a\u0627\u062c\u064a\u0629 \u0645\u0646 \u062e\u0644\u0627\u0644 \u062a\u0643\u062b\u064a\u0641 \u0627\u0644\u0632\u0631\u0627\u0639\u0629 (\u0639\u0644\u0649 \u0633\u0628\u064a\u0644 \u0627\u0644\u0645\u062b\u0627\u0644\u060c \u0627\u0633\u062a\u062e\u062f\u0627\u0645 \u0627\u0644\u0631\u064a \u0623\u0648 \u0643\u062b\u0627\u0641\u0627\u062a \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0627\u0644\u0639\u0627\u0644\u064a\u0629). \u0647\u0630\u0647 \u0647\u064a \u062d\u0627\u0644\u0629 \u062a\u0648\u0633\u0639 \u0628\u0633\u0627\u062a\u064a\u0646 \u0627\u0644\u0632\u064a\u062a\u0648\u0646 \u0641\u064a \u0623\u0631\u0627\u0636\u064a \u0645\u062d\u0627\u0635\u064a\u0644 \u0627\u0644\u062d\u0628\u0648\u0628 \u0641\u064a \u0627\u0644\u0639\u0642\u0648\u062f \u0627\u0644\u0623\u062e\u064a\u0631\u0629. \u062a\u062d\u0644\u0644 \u0647\u0630\u0647 \u0627\u0644\u062f\u0631\u0627\u0633\u0629 \u062a\u0623\u062b\u064a\u0631 \u0647\u0630\u0627 \u0627\u0644\u062a\u0648\u0633\u0639 \u0639\u0644\u0649 \u062e\u0635\u0627\u0626\u0635 \u0627\u0644\u0628\u0633\u0627\u062a\u064a\u0646 \u0648\u0639\u0646\u0627\u0635\u0631 \u0627\u0644\u0645\u0646\u0627\u0638\u0631 \u0627\u0644\u0637\u0628\u064a\u0639\u064a\u0629 \u0641\u064a \u062f\u0631\u0627\u0633\u0629 \u062d\u0627\u0644\u0629 \u0641\u064a '\u0643\u0627\u0645\u0628\u064a\u0646\u064a\u0627' \u0642\u0631\u0637\u0628\u0629 \u0641\u064a \u062c\u0646\u0648\u0628 \u0625\u0633\u0628\u0627\u0646\u064a\u0627 \u0628\u0646\u0627\u0621\u064b \u0639\u0644\u0649 \u062a\u0637\u0648\u0631 \u0633\u0637\u062d\u0647\u0627 \u0648\u0623\u0646\u0645\u0627\u0637\u0647\u0627 \u062e\u0644\u0627\u0644 \u0627\u0644\u0641\u062a\u0631\u0629 \u0645\u0646 2005 \u0625\u0644\u0649 2018. \u062a\u0638\u0647\u0631 \u0646\u062a\u0627\u0626\u062c\u0646\u0627 \u0623\u0646 \u0628\u0633\u0627\u062a\u064a\u0646 \u0627\u0644\u0632\u064a\u062a\u0648\u0646 \u062a\u0636\u0627\u0639\u0641\u062a \u0645\u0633\u0627\u062d\u062a\u0647\u0627 \u0628\u0639\u062f \u0641\u062a\u0631\u0629 13 \u0639\u0627\u0645\u064b\u0627\u060c \u0645\u0646 7997.8 \u0625\u0644\u0649 16447.6 \u0647\u0643\u062a\u0627\u0631. \u0641\u064a \u0627\u0644\u0645\u062a\u0648\u0633\u0637\u060c \u062a\u0645\u064a\u0644 \u0627\u0644\u0628\u0633\u0627\u062a\u064a\u0646 \u0627\u0644\u062c\u062f\u064a\u062f\u0629 \u0625\u0644\u0649 \u0623\u0646 \u062a\u0643\u0648\u0646 \u0630\u0627\u062a \u0643\u062b\u0627\u0641\u0629 \u0646\u0628\u0627\u062a\u064a\u0629 \u0623\u0639\u0644\u0649 \u0648\u0627\u0633\u062a\u062e\u062f\u0627\u0645 \u0623\u0643\u062b\u0631 \u062a\u0648\u0627\u062a\u0631\u0627\u064b \u0644\u0644\u0631\u064a \u0641\u064a \u0641\u062a\u0631\u0629 \u0627\u0644\u062f\u0631\u0627\u0633\u0629. \u0639\u0644\u0649 \u0627\u0644\u0631\u063a\u0645 \u0645\u0646 \u0647\u0630\u0627 \u0627\u0644\u0627\u062a\u062c\u0627\u0647 \u0646\u062d\u0648 \u0627\u0644\u062a\u0643\u062b\u064a\u0641\u060c \u064a\u064f\u0638\u0647\u0631 \u0627\u0644\u0648\u0636\u0639 \u0627\u0644\u062d\u0627\u0644\u064a \u063a\u0627\u0644\u0628\u064a\u0629 \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0627\u0644\u0628\u0639\u0644\u064a\u0629 (76.4 \u066a) \u0648\u0643\u062b\u0627\u0641\u0629 \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0627\u0644\u0645\u062a\u0648\u0633\u0637\u0629\u060c 120\u2013200 \u0634\u062c\u0631\u0629/\u0647\u0643\u062a\u0627\u0631\u060c (42.7 \u066a) \u0645\u0646 \u0627\u0644\u0645\u0633\u0627\u062d\u0629. \u0648\u0645\u0639 \u0630\u0644\u0643\u060c \u062a\u0646\u0634\u0623 \u0627\u0644\u0628\u0633\u0627\u062a\u064a\u0646 \u0627\u0644\u0645\u0643\u062b\u0641\u0629 \u062d\u062f\u064a\u062b\u064b\u0627 \u0641\u064a \u0627\u0644\u0645\u0646\u0637\u0642\u0629\u060c \u0645\u0645\u0627 \u064a\u0624\u062f\u064a \u0625\u0644\u0649 \u0641\u0633\u064a\u0641\u0633\u0627\u0621 \u0645\u0646 \u0627\u0644\u0628\u0633\u0627\u062a\u064a\u0646 \u0630\u0627\u062a \u0627\u0644\u062e\u0635\u0627\u0626\u0635 \u0627\u0644\u0645\u062e\u062a\u0644\u0641\u0629 (\u0627\u0644\u0645\u0646\u062d\u062f\u0631\u060c \u0643\u062b\u0627\u0641\u0629 \u0627\u0644\u0623\u0634\u062c\u0627\u0631\u060c \u0646\u0648\u0639 \u0627\u0644\u062a\u0631\u0628\u0629) \u0648\u0627\u0644\u0625\u062f\u0627\u0631\u0627\u062a \u0627\u0644\u0632\u0631\u0627\u0639\u064a\u0629 (\u0627\u0644\u0631\u064a\u060c \u0627\u0644\u063a\u0637\u0627\u0621 \u0627\u0644\u0646\u0628\u0627\u062a\u064a \u0627\u0644\u0623\u0631\u0636\u064a). \u0628\u0627\u0644\u0625\u0636\u0627\u0641\u0629 \u0625\u0644\u0649 \u0630\u0644\u0643\u060c \u062a\u0645 \u0627\u0633\u062a\u0643\u0645\u0627\u0644 \u0647\u0630\u0627 \u0627\u0644\u062a\u0648\u0635\u064a\u0641 \u0628\u062c\u0631\u062f \u0644\u0644\u0639\u0646\u0627\u0635\u0631 \u0634\u0628\u0647 \u0627\u0644\u0637\u0628\u064a\u0639\u064a\u0629 \u0627\u0644\u062d\u0627\u0644\u064a\u0629 \u0627\u0644\u0645\u0631\u062a\u0628\u0637\u0629 \u0628\u0647\u0630\u0647 \u0627\u0644\u0628\u0633\u0627\u062a\u064a\u0646 \u0644\u062a\u062d\u062f\u064a\u062f \u0627\u0644\u062d\u0627\u0644\u0629 \u0627\u0644\u0631\u0627\u0647\u0646\u0629 \u0644\u0644\u0645\u0634\u0647\u062f \u0627\u0644\u0632\u0631\u0627\u0639\u064a \u0627\u0644\u0625\u0642\u0644\u064a\u0645\u064a. \u062a\u0645 \u062c\u0631\u062f \u0645\u0627 \u0645\u062c\u0645\u0648\u0639\u0647 507 \u0634\u062c\u0631\u0629 \u0645\u0639\u0632\u0648\u0644\u0629 \u0648\u0639\u0646\u0627\u0635\u0631 \u0645\u062e\u062a\u0644\u0641\u0629 \u0645\u0646 \u0627\u0644\u0645\u0646\u0627\u0638\u0631 \u0627\u0644\u0637\u0628\u064a\u0639\u064a\u0629 \u0627\u0644\u062e\u0637\u064a\u0629 \u0648\u0627\u0644\u0645\u0636\u0644\u0639\u0629 (343.9 \u0643\u0645 \u0648 714.0 \u0647\u0643\u062a\u0627\u0631 \u0639\u0644\u0649 \u0627\u0644\u062a\u0648\u0627\u0644\u064a)\u060c \u0645\u062c\u0632\u0623\u0629 \u0628\u0634\u0643\u0644 \u0631\u0626\u064a\u0633\u064a. \u0645\u0646 \u0639\u0646\u0627\u0635\u0631 \u0627\u0644\u0645\u0646\u0627\u0638\u0631 \u0627\u0644\u0637\u0628\u064a\u0639\u064a\u0629 \u0627\u0644\u0645\u0636\u0644\u0639\u0629 \u0647\u0630\u0647\u060c \u0644\u0627 \u064a\u0632\u0627\u0644 \u062c\u0632\u0621 \u0643\u0628\u064a\u0631 (\u0639\u0644\u0649 \u0633\u0628\u064a\u0644 \u0627\u0644\u0645\u062b\u0627\u0644\u060c \u0627\u0644\u0645\u0646\u062d\u062f\u0631\u0627\u062a \u0648\u0627\u0644\u0623\u062e\u0627\u062f\u064a\u062f \u0648\u0628\u0646\u0648\u0643 \u0627\u0644\u0645\u064a\u0627\u0647 \u0648\u0627\u0644\u0634\u0631\u0627\u0626\u0637/\u0627\u0644\u0623\u0648\u062c\u0647 \u063a\u064a\u0631 \u0627\u0644\u0645\u0646\u062a\u062c\u0629) \u063a\u064a\u0631 \u0646\u0628\u0627\u062a\u064a (57 \u066a). \u0644\u0630\u0644\u0643\u060c \u064a\u062c\u0628 \u0627\u0644\u0646\u0638\u0631 \u0641\u064a \u0647\u0630\u0647 \u0627\u0644\u0639\u0646\u0627\u0635\u0631 \u0641\u064a \u0627\u0644\u0633\u064a\u0627\u0633\u0627\u062a \u0627\u0644\u0632\u0631\u0627\u0639\u064a\u0629 \u0645\u062a\u0639\u062f\u062f\u0629 \u0627\u0644\u0645\u0633\u062a\u0648\u064a\u0627\u062a \u0643\u0645\u0646\u0627\u0637\u0642 \u0627\u0633\u062a\u0639\u0627\u062f\u0629 \u0645\u062d\u062a\u0645\u0644\u0629 \u0644\u062a\u0639\u0632\u064a\u0632 \u062a\u0648\u0641\u064a\u0631 \u062e\u062f\u0645\u0627\u062a \u0627\u0644\u0646\u0638\u0627\u0645 \u0627\u0644\u0625\u064a\u0643\u0648\u0644\u0648\u062c\u064a.", "keywords": ["Period (music)", "Soil Degradation", "Vascular Flora of Mediterranean Europe and North Africa", "Soil Science", "Orchard", "Plant Science", "Mediterranean", "Horticulture", "Genetic and Environmental Factors in Grapevine Cultivation", "01 natural sciences", "Environmental science", "Agricultural and Biological Sciences", "Pathology", "Ecosystem services", "Landscape elements", "Agroforestry", "Irrigation", "Biology", "0105 earth and related environmental sciences", "2. Zero hunger", "Geography", "Ecology", "Physics", "Common agricultural policy", "Olive groves", "Life Sciences", "Agriculture", "Forestry", "Acoustics", "04 agricultural and veterinary sciences", "15. Life on land", "Soil Erosion and Agricultural Sustainability", "Olive trees", "Agronomy", "Sustainability", "Archaeology", "FOS: Biological sciences", "Shifting cultivation", "Medicine", "0401 agriculture", " forestry", " and fisheries", "Vegetation (pathology)"]}, "links": [{"href": "https://doi.org/10.1016/j.landusepol.2022.106065"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Land%20Use%20Policy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.landusepol.2022.106065", "name": "item", "description": "10.1016/j.landusepol.2022.106065", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.landusepol.2022.106065"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-01T00:00:00Z"}}, {"id": "10.1016/j.njas.2011.05.002", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:15:59Z", "type": "Journal Article", "created": "2011-06-27", "title": "Life Cycle Analysis Of Greenhouse Gas Emissions From Organic And Conventional Food Production Systems, With And Without Bio-Energy Options", "description": "AbstractThe Nafferton Factorial Systems Comparison experiments were begun in 2003 to provide data on the production and quality effects of a whole spectrum of different crop production systems ranging from fully conventional to fully organic. In this paper, the crop production data for the first 4 years of the experiments have been used to conduct a life cycle analysis of the greenhouse gas (GHG) emissions from organic and conventional production systems. Actual yield and field activity data from two of the treatments in the experiments (a stocked organic system and a stockless conventional system) were used to determine the GHG emissions per hectare and per MJ of human food energy produced, using both the farm gate and wider society as system boundaries. Emissions from these two baseline scenarios were compared with six other modelled scenarios: conventional stocked system, a stockless system where all crop residues were incorporated into the soil, two stocked systems where manure was used for biogas production, and two stockless systems where all crop residues were removed from the field and used for bio-energy production. Changing the system boundary from the farm gate to wider society did not substantially alter the GHG emissions per hectare of land when organic production methods were used; however, in conventional systems, which rely on more off-farm inputs, emissions were much greater per hectare when societal boundaries were used. Incorporating on-farm bioenergy production into the system allowed GHG emissions to be offset by energy generation. In the case of the organic system that included pyrolysis of crop residues, net GHG emissions were negative, indicating that energy offsets and sequestration of C in biochar can completely offset emissions of GHG from food production. The analysis demonstrates the importance of considering system boundaries and the end use of all agricultural products when conducting life cycle analyses of food production systems.", "keywords": ["2. Zero hunger", "Carbon sequestration", "Organic farming", "0211 other engineering and technologies", "Plant Science", "02 engineering and technology", "15. Life on land", "Development", "7. Clean energy", "6. Clean water", "12. Responsible consumption", "Mixed farming", "13. Climate action", "11. Sustainability", "Greenhouse gas emissions", "Crop production systems", "0202 electrical engineering", " electronic engineering", " information engineering", "Animal Science and Zoology", "Off-farm inputs", "Life cycle analysis", "Agronomy and Crop Science", "Food Science"]}, "links": [{"href": "https://doi.org/10.1016/j.njas.2011.05.002"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/NJAS%3A%20Wageningen%20Journal%20of%20Life%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.njas.2011.05.002", "name": "item", "description": "10.1016/j.njas.2011.05.002", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.njas.2011.05.002"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-12-01T00:00:00Z"}}, {"id": "10.1016/j.plantsci.2023.111919", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:00Z", "type": "Journal Article", "created": "2023-11-20", "title": "Phytosiderophore pathway response in barley exposed to iron, zinc or copper starvation", "description": "Efficient micronutrient acquisition is a critical factor in selecting micronutrient dense crops for human consumption. Enhanced exudation and re-uptake of metal chelators, so-called phytosiderophores, by roots of graminaceous plants has been implicated in efficient micronutrient acquisition. We compared PS biosynthesis and exudation as a response mechanism to either Fe, Zn or Cu starvation. Two barley (Hordeum vulgare L.) lines with contrasting micronutrient grain yields were grown hydroponically and PS exudation (LC-MS) and root gene expression (RNAseq) were determined after either Fe, Zn, or Cu starvation. The response strength of the PS pathway was micronutrient dependent and decreased in the order Fe >\u00a0Zn >\u00a0Cu deficiency. We observed a stronger expression of PS pathway genes and greater PS exudation in the barley line with large micronutrient grain yield suggesting that a highly expressed PS pathway might be an important trait involved in high micronutrient accumulation. In addition to several metal specific transporters, we also found that the expression of IRO2 and bHLH156 transcription factors was not only induced under Fe but also under Zn and Cu deficiency. Our study delivers important insights into the role of the PS pathway in the acquisition of different micronutrients.", "keywords": ["2. Zero hunger", "Phytosiderophore", "/dk/atira/pure/subjectarea/asjc/1300/1311", "/dk/atira/pure/subjectarea/asjc/1100/1102", "Root exudation", "name=Genetics", "Iron", "/dk/atira/pure/subjectarea/asjc/1100/1110", "Hordeum", "Copper deficiency", "Plant Roots", "630", "Mugineic acid", "name=Agronomy and Crop Science", "Zinc", "Barley", "Humans", "Micronutrients", "name=Plant Science", "Biofortification", "Copper"]}, "links": [{"href": "https://doi.org/10.1016/j.plantsci.2023.111919"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.plantsci.2023.111919", "name": "item", "description": "10.1016/j.plantsci.2023.111919", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.plantsci.2023.111919"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-02-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2022.156952", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:06Z", "type": "Journal Article", "created": "2022-06-22", "title": "Integrated organic and inorganic fertilization and reduced irrigation altered prokaryotic microbial community and diversity in different compartments of wheat root zone contributing to improved nitrogen uptake and wheat yield", "description": "Open AccessThe effect of long-term water and integrated fertilization on prokaryotic microorganisms and their regulation for crop nutrient uptake remains unknown. Therefore, the impact of soil water and integrated fertilization after eight years on prokaryotic microbial communities in different compartments of root zone and their association with wheat nitrogen (N) absorption and yield were investigated. The results showed that compared with fertilization treatments (F), water regimes (W) more drastically modulated the prokaryotic microbial community structure and diversity in bulk soil, rhizosphere and endosphere. The increase of irrigation improved the prokaryotic diversity in the rhizosphere and endosphere while decreased the diversity in the bulk soil. Application of organic fertilizers significantly improved soil organic matter (SOM) and nutrient contents, increased rhizosphere and endophytic prokaryotic microbial diversity, and elevated the relative abundance of aerobic ammonia oxidation and nitrification-related functional microorganisms in rhizosphere and endosphere. Increasing irrigation elevated the relative abundance of functional microorganisms related to aerobic ammonia oxidation and nitrification in the rhizosphere and endosphere. Soil water content (SWC) and NH4+-N as well as NO3\u2212-N were key predictors of prokaryotic microbial community composition under W and F treatments, respectively. Appropriate application of irrigation and organic fertilizers increased the relative abundance of some beneficial bacteria such as Flavobacterium. Water and fertilization treatments regulated the prokaryotic microbial communities of bulk soil, rhizosphere and endosphere by altering SWC and SOM, and provided evidence for the modulation of prokaryotic microorganisms to promote nitrogen uptake and wheat yield under long-term irrigation and fertilization. Conclusively, the addition of organic manure (50 %) with inorganic fertilizers (50 %) and reduced amount of irrigation (pre-sowing and jointing-period irrigation) decreased the application amount of chemical fertilizers and water, while increased SOM and nutrient content, improved prokaryotic diversity, and changed prokaryotic microbial community structure in the wheat root zone, resulting in enhanced nutrient uptake and wheat yield.", "keywords": ["0106 biological sciences", "Yield", "Microorganism", "Microbial population biology", "Nitrogen", "Soil Science", "Organic chemistry", "Plant Science", "01 natural sciences", "Environmental science", "Agricultural and Biological Sciences", "Soil", "Symbiotic Nitrogen Fixation in Legumes", "Soil water", "Genetics", "Fertilizers", "Biology", "Irrigation", "Soil Microbiology", "Triticum", "2. Zero hunger", "Soil organic matter", "Soil Fertility", "Physicochemical factors", "Ecology", "Bacteria", "Microbiota", "Marine Microbial Diversity and Biogeography", "Water", "Life Sciences", "04 agricultural and veterinary sciences", "15. Life on land", "Nitrification", "Agronomy", "6. Clean water", "Chemistry", "Human fertilization", "13. Climate action", "Fertilization", "FOS: Biological sciences", "Environmental Science", "Physical Sciences", "Rhizosphere", "Bulk soil", "0401 agriculture", " forestry", " and fisheries", "Prokaryotic microorganisms", "Endosphere", "Soil Carbon Dynamics and Nutrient Cycling in Ecosystems", "Nutrient"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2022.156952"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2022.156952", "name": "item", "description": "10.1016/j.scitotenv.2022.156952", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2022.156952"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-10-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2022.108754", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:17Z", "type": "Journal Article", "created": "2022-06-06", "title": "Effects of common European tree species on soil microbial resource limitation, microbial communities and soil carbon", "description": "Open Access\u0643\u0634\u0641\u062a \u0627\u0644\u062f\u0631\u0627\u0633\u0627\u062a \u0627\u0644\u062a\u064a \u0623\u062c\u0631\u064a\u062a \u0639\u0644\u0649 \u062a\u0623\u062b\u064a\u0631\u0627\u062a \u0623\u0646\u0648\u0627\u0639 \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0639\u0644\u0649 \u0627\u0644\u062a\u0631\u0628\u0629 \u0639\u0646 \u062a\u0623\u062b\u064a\u0631 \u0643\u0628\u064a\u0631 \u0639\u0644\u0649 \u0645\u062e\u0632\u0648\u0646 \u0627\u0644\u0643\u0631\u0628\u0648\u0646 \u0627\u0644\u0639\u0636\u0648\u064a \u0641\u064a \u0627\u0644\u062a\u0631\u0628\u0629 (SOC) \u0648\u062a\u0648\u0632\u064a\u0639 \u0627\u0644\u0643\u0631\u0628\u0648\u0646 (C) \u0628\u064a\u0646 \u0623\u0631\u0636\u064a\u0629 \u0627\u0644\u063a\u0627\u0628\u0627\u062a \u0648\u0627\u0644\u062a\u0631\u0628\u0629 \u0627\u0644\u0645\u0639\u062f\u0646\u064a\u0629\u060c \u0644\u0643\u0646 \u0627\u0644\u0622\u0644\u064a\u0627\u062a \u0627\u0644\u0623\u0633\u0627\u0633\u064a\u0629 \u0628\u0645\u0627 \u0641\u064a \u0630\u0644\u0643 \u0623\u062f\u0648\u0627\u0631 \u0633\u0645\u0627\u062a \u0627\u0644\u0642\u0645\u0627\u0645\u0629 \u0648\u062e\u0635\u0627\u0626\u0635 \u0627\u0644\u062a\u0631\u0628\u0629 \u0648\u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u064a\u0648\u0645 \u0644\u0627 \u062a\u0632\u0627\u0644 \u063a\u064a\u0631 \u0648\u0627\u0636\u062d\u0629. \u0648\u0644\u0645\u0648\u0627\u062c\u0647\u0629 \u0647\u0630\u0627 \u0627\u0644\u062a\u062d\u062f\u064a\u060c \u0627\u062e\u062a\u0628\u0631\u0646\u0627 \u062a\u0623\u062b\u064a\u0631 \u0633\u062a\u0629 \u0623\u0646\u0648\u0627\u0639 \u0645\u0646 \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0627\u0644\u0623\u0648\u0631\u0648\u0628\u064a\u0629 \u0627\u0644\u0634\u0627\u0626\u0639\u0629 \u0639\u0644\u0649 \u062c\u0648\u062f\u0629 \u0648\u062a\u0648\u0627\u0641\u0631 \u0627\u0644\u0645\u0648\u0627\u062f \u0627\u0644\u0639\u0636\u0648\u064a\u0629 \u0641\u064a \u0627\u0644\u062a\u0631\u0628\u0629 (SOM) \u0643\u0645\u0627 \u062a\u062a\u0635\u0648\u0631\u0647\u0627 \u0627\u0644\u0645\u062c\u062a\u0645\u0639\u0627\u062a \u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u064a\u0629 \u0627\u0644\u062a\u064a \u062a\u0645 \u062a\u062c\u0645\u064a\u0639\u0647\u0627 \u0628\u0634\u0643\u0644 \u0637\u0628\u064a\u0639\u064a \u0648\u0627\u0633\u062a\u0643\u0634\u0641\u0646\u0627 \u0627\u0644\u0631\u0648\u0627\u0628\u0637 \u0627\u0644\u0645\u062d\u062a\u0645\u0644\u0629 \u0628\u064a\u0646 \u0623\u0646\u0634\u0637\u0629 \u0625\u0646\u0632\u064a\u0645\u0627\u062a \u0627\u0644\u062a\u0631\u0628\u0629 (EAs)\u060c \u0648\u0627\u0644\u062d\u062f \u0645\u0646 \u0627\u0644\u0645\u0648\u0627\u0631\u062f \u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u064a\u0629\u060c \u0648\u0627\u0644\u0645\u062c\u062a\u0645\u0639 \u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u064a \u0645\u0639 \u0645\u062e\u0632\u0648\u0646\u0627\u062a \u0627\u0644\u0643\u0631\u0628\u0648\u0646 \u0627\u0644\u0639\u0636\u0648\u064a \u0641\u064a \u0627\u0644\u062a\u0631\u0628\u0629. \u062a\u0645 \u0632\u0631\u0639 \u0623\u0646\u0648\u0627\u0639 \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0627\u0644\u0633\u062a\u0629 \u0627\u0644\u0645\u062f\u0631\u0648\u0633\u0629 (Acer pseudoplatanus L. \u0648 Fraxinus excelsior L. \u0648 Fagus sylvatica L. \u0648 Quercus robur L. \u0648 Tilia cordata L. \u0648 Picea abies L.) \u0641\u064a \u0645\u0632\u0627\u0631\u0639 \u0623\u062d\u0627\u062f\u064a\u0629 \u0645\u0634\u062a\u0631\u0643\u0629 \u0641\u064a \u0627\u0644\u062d\u062f\u064a\u0642\u0629 \u0645\u0646\u0630 \u0623\u0643\u062b\u0631 \u0645\u0646 40 \u0639\u0627\u0645\u064b\u0627 \u0641\u064a \u0633\u062a\u0629 \u0645\u0648\u0627\u0642\u0639 \u0641\u064a \u062c\u0645\u064a\u0639 \u0623\u0646\u062d\u0627\u0621 \u0627\u0644\u062f\u0646\u0645\u0627\u0631\u0643. \u0641\u064a \u0623\u0631\u0636\u064a\u0629 \u0627\u0644\u063a\u0627\u0628\u0627\u062a\u060c \u0627\u0646\u062e\u0641\u0636\u062a \u0627\u0644\u0643\u062a\u0644\u0629 \u0627\u0644\u062d\u064a\u0648\u064a\u0629 \u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u064a\u0629 C\u060c \u0648\u0627\u0644\u0643\u062a\u0644\u0629 \u0627\u0644\u062d\u064a\u0648\u064a\u0629 \u0627\u0644\u0641\u0637\u0631\u064a\u0629 \u0648\u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u064a\u0629 \u0627\u0644\u0643\u0644\u064a\u0629 \u0648\u0646\u0633\u0628 \u0627\u0644\u0641\u0637\u0631\u064a\u0627\u062a \u0625\u0644\u0649 \u0627\u0644\u0628\u0643\u062a\u064a\u0631\u064a\u0627 (F/B) \u0645\u0639 \u0627\u0646\u062e\u0641\u0627\u0636 \u062c\u0648\u062f\u0629 \u0627\u0644\u0642\u0645\u0627\u0645\u0629. \u0623\u0634\u0627\u0631\u062a \u0627\u0644\u0642\u064a\u0627\u0633\u0627\u062a \u0627\u0644\u0645\u062a\u0643\u0627\u0641\u0626\u0629 \u0627\u0644\u0623\u0646\u0632\u064a\u0645\u064a\u0629 \u0627\u0644\u0628\u064a\u0626\u064a\u0629 \u0648 EAs \u0627\u0644\u0646\u0633\u0628\u064a\u0629 \u0625\u0644\u0649 \u0623\u0646 \u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u0627\u062a \u0641\u064a \u0623\u0631\u0636\u064a\u0629 \u063a\u0627\u0628\u0627\u062a \u0627\u0644\u062a\u0646\u0648\u0628 \u0643\u0627\u0646\u062a \u0623\u0643\u062b\u0631 \u0645\u062d\u062f\u0648\u062f\u064a\u0629 \u0628\u0633\u0628\u0628 \u0627\u0644\u0641\u0648\u0633\u0641\u0648\u0631 (P) \u0645\u0646\u0647\u0627 \u0641\u064a \u0627\u0644\u0642\u064a\u0642\u0628 \u0648\u0627\u0644\u062c\u064a\u0631 \u0648\u0627\u0644\u0632\u0627\u0646\u060c \u0641\u064a \u062d\u064a\u0646 \u0623\u0646 \u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u0627\u062a \u0641\u064a \u0627\u0644\u062a\u0631\u0628\u0629 \u0627\u0644\u0645\u0639\u062f\u0646\u064a\u0629 \u0643\u0627\u0646\u062a \u0623\u0642\u0644 \u0645\u062d\u062f\u0648\u062f\u064a\u0629 \u0641\u064a \u0627\u0644\u062a\u0646\u0648\u0628 \u0645\u0646\u0647\u0627 \u0641\u064a \u0627\u0644\u0632\u0631\u0627\u0639\u0627\u062a \u0627\u0644\u0623\u062d\u0627\u062f\u064a\u0629 \u0627\u0644\u0623\u062e\u0631\u0649. \u0643\u0627\u0646 \u0644\u0644\u062a\u0631\u0628\u0629 \u0627\u0644\u0645\u0639\u062f\u0646\u064a\u0629 \u062a\u062d\u062a \u0623\u0646\u0648\u0627\u0639 \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0627\u0644\u0645\u0631\u062a\u0628\u0637\u0629 \u0628\u0627\u0644\u0641\u0637\u0631\u064a\u0627\u062a \u0627\u0644\u062c\u0630\u0631\u064a\u0629 \u0627\u0644\u0641\u0637\u0631\u064a\u0629 (AM) \u0642\u064a\u0648\u062f \u062c\u0631\u062b\u0648\u0645\u064a\u0629 \u0623\u0639\u0644\u0649 \u0639\u0644\u0649 C \u0648 P\u060c \u0648\u0627\u0644\u0643\u062a\u0644\u0629 \u0627\u0644\u062d\u064a\u0648\u064a\u0629 \u0627\u0644\u0628\u0643\u062a\u064a\u0631\u064a\u0629 \u0648\u0627\u0644\u0643\u062a\u0644\u0629 \u0627\u0644\u062d\u064a\u0648\u064a\u0629 \u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u064a\u0629 \u0627\u0644\u0643\u0644\u064a\u0629 \u0645\u0642\u0627\u0631\u0646\u0629 \u0628\u0627\u0644\u0623\u0646\u0648\u0627\u0639 \u062a\u062d\u062a \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0627\u0644\u0645\u0631\u062a\u0628\u0637\u0629 \u0628\u0627\u0644\u0641\u0637\u0631\u064a\u0627\u062a \u0627\u0644\u062c\u0630\u0631\u064a\u0629 \u0627\u0644\u062e\u0627\u0631\u062c\u064a\u0629 (ECM). \u0623\u0634\u0627\u0631\u062a \u0646\u062a\u0627\u0626\u062c\u0646\u0627 \u0625\u0644\u0649 \u0623\u0646 \u0623\u0646\u0648\u0627\u0639 \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0630\u0627\u062a \u0627\u0644\u0642\u0645\u0627\u0645\u0629 \u0639\u0627\u0644\u064a\u0629 \u0627\u0644\u062c\u0648\u062f\u0629 (\u0623\u064a \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0627\u0644\u0645\u0631\u062a\u0628\u0637\u0629 \u0628\u0640 AM) \u0644\u062f\u064a\u0647\u0627 (1) \u0643\u062a\u0644\u0629 \u062d\u064a\u0648\u064a\u0629 \u0645\u064a\u0643\u0631\u0648\u0628\u064a\u0629 \u0623\u0639\u0644\u0649 \u0648\u0645\u062d\u062f\u0648\u062f\u064a\u0629 \u0623\u0642\u0644 \u0641\u064a \u0627\u0644\u0645\u063a\u0630\u064a\u0627\u062a \u0645\u0645\u0627 \u0623\u062f\u0649 \u0625\u0644\u0649 \u0627\u0631\u062a\u0641\u0627\u0639 \u0645\u0639\u062f\u0644\u0627\u062a \u0627\u0644\u062a\u062d\u0644\u0644 \u0648\u0627\u0646\u062e\u0641\u0627\u0636 \u0645\u062e\u0632\u0648\u0646\u0627\u062a C \u0641\u064a \u0642\u0627\u0639 \u0627\u0644\u063a\u0627\u0628\u0629\u060c \u0648 (2) \u064a\u0645\u0643\u0646 \u0623\u0646 \u062a\u0624\u062f\u064a \u0647\u0630\u0647 \u0627\u0644\u0623\u0646\u0648\u0627\u0639 \u0645\u0646 \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0625\u0644\u0649 \u0627\u0633\u062a\u0642\u0631\u0627\u0631 \u0623\u0643\u0628\u0631 \u0644\u0644\u062a\u0631\u0628\u0629 \u0627\u0644\u0645\u0639\u062f\u0646\u064a\u0629 C \u0639\u0646 \u0637\u0631\u064a\u0642 \u062a\u0643\u0648\u064a\u0646 OM \u0627\u0644\u0645\u0631\u062a\u0628\u0637 \u0628\u0627\u0644\u0645\u0639\u0627\u062f\u0646 \u0648\u062a\u0645\u0639\u062f\u0646 \u0645\u064a\u0643\u0631\u0648\u0628\u064a \u0623\u0643\u0628\u0631 \u0644\u0640 SOM \u0645\u0639 \u0627\u0631\u062a\u0641\u0627\u0639 \u0627\u0644\u0637\u0644\u0628 \u0639\u0644\u0649 \u0627\u0644\u0645\u0648\u0627\u0631\u062f \u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u064a\u0629. \u062a\u0634\u064a\u0631 \u0627\u0644\u0646\u062a\u0627\u0626\u062c \u0625\u0644\u0649 \u0623\u0646 EA \u0628\u0648\u0633\u0627\u0637\u0629 \u0623\u0646\u0648\u0627\u0639 \u0627\u0644\u0623\u0634\u062c\u0627\u0631\u060c \u0648\u0627\u0644\u062d\u062f \u0645\u0646 \u0627\u0644\u0645\u0648\u0627\u0631\u062f \u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u064a\u0629 \u0648\u062a\u0643\u0648\u064a\u0646 \u0627\u0644\u0645\u062c\u062a\u0645\u0639 \u0627\u0644\u0645\u064a\u0643\u0631\u0648\u0628\u064a \u0647\u064a \u0645\u062d\u0631\u0643\u0627\u062a \u0645\u0647\u0645\u0629 \u0644\u0644\u0645\u062e\u0632\u0648\u0646\u0627\u062a \u0648\u0627\u0644\u062a\u0648\u0632\u064a\u0639 \u0627\u0644\u0631\u0623\u0633\u064a \u0644\u0645\u062e\u0632\u0648\u0646 \u0627\u0644\u0643\u0631\u0628\u0648\u0646 \u0627\u0644\u0639\u0636\u0648\u064a \u0641\u064a \u0627\u0644\u062a\u0631\u0628\u0629 \u0628\u064a\u0646 \u0623\u0646\u0648\u0627\u0639 \u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0648\u0628\u064a\u0646 \u0646\u0648\u0639\u064a\u0646 \u0645\u0646 \u0627\u0644\u062c\u0630\u0648\u0631 \u0627\u0644\u0641\u0637\u0631\u064a\u0629 \u0627\u0644\u0645\u0631\u062a\u0628\u0637\u0629 \u0628\u0647\u0627.", "keywords": ["Biomass (ecology)", "Microbial population biology", "Fagus sylvatica", "Soil Science", "Plant Science", "Plant litter", "Agricultural and Biological Sciences", "Mycorrhizal Fungi and Plant Interactions", "Soil water", "Genetics", "Monoculture", "Forest floor", "Saproxylic Insect Ecology and Forest Management", "Biology", "Beech", "Soil organic matter", "Soil Fertility", "Ecology", "Bacteria", "Picea abies", "Botany", "Life Sciences", "04 agricultural and veterinary sciences", "Soil carbon", "Agronomy", "Insect Science", "FOS: Biological sciences", "0401 agriculture", " forestry", " and fisheries", "Soil Carbon Dynamics and Nutrient Cycling in Ecosystems", "Nutrient"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2022.108754"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2022.108754", "name": "item", "description": "10.1016/j.soilbio.2022.108754", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2022.108754"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-09-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2022.108918", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:17Z", "type": "Journal Article", "created": "2022-12-22", "title": "Litter chemistry of common European tree species drives the feeding preference and consumption rate of soil invertebrates, and shapes the diversity and structure of gut and faecal microbiomes", "description": "Open AccessTerrestrial isopods and millipedes are key drivers of a litter decomposition in terrestrial ecosystems but the effects of litter chemistry on feeding preference and litter consumption rate as well as on the diversity and composition of gut and faecal microbiome still entails several challenges. We established a mesocosm experiment with terrestrial isopods (Oniscus asellus) and millipedes (Glomeris marginata) fed by leaf litter from six common European tree species (ash, maple, lime, beech, oak and Norway spruce) to reveal the effect of litter chemistry on consumption rate and feeding preference as well as on the compositions of gut and faecal microbiomes. The total percentage of consumed litter showed that O. asellus preferred nutrient-rich and labile-C litter of ash over more recalcitrant litter of oak, beech, and Norway spruce, while G. marginata preferred calcium-rich ash, maple and lime litter over beech and Norway spruce. Consumption of litter by O. asellus and G. marginata increased with concentrations of magnesium, sulphur and potassium but decreased with concentrations of iron, phosphorus, lignin, cellulose and TOC. The millipede G. marginata harboured higher bacterial OTU richness (73.5 \u00b1 12.5) than the isopod O. asellus (49.1 \u00b1 15.9), but fungal OTU richness was similar with 25.8 \u00b1 6.7 in O. asellus and 25.7 \u00b1 2.7 in G. marginata. In total, faeces of both animals hosted higher diversity than gut. In gut and faeces of O. asellus, the fungal OTU richness was highest for individuals fed by litter of Norway spruce, while lowest OTU richness was recorded for individuals fed by litter of more palatable ash. In contrast, the highest diversity of the fungal community in gut and faeces of G. marginata was recorded for individuals fed by palatable lime litter, while the lowest OTUs richness was recorded when millipedes were fed by maple and spruce. The structures of bacterial and fungal communities generally separated between O. asellus and G. marginata. The fungal community structure in gut and faeces differed between animals fed by different foliar litters, while the bacterial community structure mainly differed between gut and faeces regardless of the offered type of litter. The fungal community structure in gut and faeces of O. asellus and G. marginata were shaped by concentrations of magnesium, sulphur, lignin and cellulose. The bacterial communities in gut and faeces of both O. asellus and G. marginata were dominated by copiotrophic bacteria, while fungal communities were dominated by unspecified saprotrophs. Our study suggest that litter quality is a strong driver of feeding preference and consumption rates as well as composition of bacterial and fungal communities in gut and faeces of two species representing the main groups of litter feeding soil fauna in European forests.", "keywords": ["0301 basic medicine", "Genomic Insights into Social Insects and Symbiosis", "Plant Science", "Plant litter", "Agricultural and Biological Sciences", "03 medical and health sciences", "Biochemistry", " Genetics and Molecular Biology", "Litter", "Genetics", "Ecological Niche", "Biology", "Ecosystem", "Beech", "0303 health sciences", "Species Distribution Modeling and Climate Change Impacts", "Ecology", "Ecological Modeling", "Botany", "Life Sciences", "15. Life on land", "Plant-Parasitic Nematodes in Molecular Plant Pathology", "Detritus", "FOS: Biological sciences", "Detritivore", "Environmental Science", "Physical Sciences", "Species richness"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2022.108918"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2022.108918", "name": "item", "description": "10.1016/j.soilbio.2022.108918", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2022.108918"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-02-01T00:00:00Z"}}, {"id": "10.1038/s41559-022-01756-5", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:52Z", "type": "Journal Article", "created": "2022-05-09", "title": "Phylotype diversity within soil fungal functional groups drives ecosystem stability", "description": "Soil fungi are fundamental to plant productivity, yet their influence on the temporal stability of global terrestrial ecosystems, and their capacity to buffer plant productivity against extreme drought events, remain uncertain. Here we combined three independent global field surveys of soil fungi with a satellite-derived temporal assessment of plant productivity, and report that phylotype richness within particular fungal functional groups drives the stability of terrestrial ecosystems. The richness of fungal decomposers was consistently and positively associated with ecosystem stability worldwide, while the opposite pattern was found for the richness of fungal plant pathogens, particularly in grasslands. We further demonstrated that the richness of soil decomposers was consistently positively linked with higher resistance of plant productivity in response to extreme drought events, while that of fungal plant pathogens showed a general negative relationship with plant productivity resilience/resistance patterns. Together, our work provides evidence supporting the critical role of soil fungal diversity to secure stable plant production over time in global ecosystems, and to buffer against extreme climate events.", "keywords": ["0301 basic medicine", "Evolution", "Resistance", "580 Plants (Botany)", "Soil", "03 medical and health sciences", "10126 Department of Plant and Microbial Biology", "Behavior and Systematics", "Soil fungal", "XXXXXX - Unknown", "10211 Zurich-Basel Plant Science Center", "Phylotype diversity", "Ecosystem", "Soil Microbiology", "Productivity", "2. Zero hunger", "0303 health sciences", "Ecology", "Biodiversity", "Ecolog\u00eda", "Plants", "15. Life on land", "Protect", " restore and promote sustainable use of terrestrial ecosystems", " sustainably manage forests", " combat\u00a0desertification", " and halt and reverse land degradation and halt biodiversity loss", "Droughts", "1105 Ecology", " Evolution", " Behavior and Systematics", "13. Climate action", "Ecosystem stability", "http://metadata.un.org/sdg/15", "2303 Ecology"]}, "links": [{"href": "https://www.nature.com/articles/s41559-022-01756-5.pdf"}, {"href": "https://doi.org/10.1038/s41559-022-01756-5"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Ecology%20%26amp%3B%20Evolution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41559-022-01756-5", "name": "item", "description": "10.1038/s41559-022-01756-5", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41559-022-01756-5"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-09T00:00:00Z"}}, {"id": "10.1016/j.still.2011.03.005", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-08-25T16:16:23Z", "type": "Journal Article", "created": "2011-04-24", "title": "No-Tillage Increases Soil Profile Carbon And Nitrogen Under Long-Term Rainfed Cropping Systems", "description": "Abstract   Emphasis and interest in carbon (C) and nitrogen (N) storage (sequestration) in soils has greatly increased in the last few years, especially C with its\u2019 potential to help alleviate or offset some of the negative effects of the increase in greenhouse gases in the atmosphere. Several questions still exist with regard to what management practices optimize C storage in the soil profile. A long-term rainfed study conducted in eastern Nebraska provided the opportunity to determine both the effects of different tillage treatments and cropping systems on soil N and soil organic C (SOC) levels throughout the soil profile. The study included six primary tillage systems (chisel, disk, plow, no-till, ridge-till, and subtill) with three cropping systems [continuous corn (CC), continuous soybean (CSB), and soybean-corn (SB-C)]. Soil samples were collected to a depth of 150-cm in depth increments of 0\u201315-, 15\u201330-, 15\u201330-, 30\u201360-, 60\u201390-, 90\u2013120-, and 120\u2013150-cm increments and composited by depth in the fall of 1999 after harvest and analyzed for total N and SOC. Significant differences in total N and SOC levels were obtained between tillage treatments and cropping systems in both surface depths of 0\u201315-, 15\u201330-cm, but also in the 30\u201360-cm depth. Total N and SOC accumulations throughout the profile (both calculated by depth and for equivalent masses of soil) were significantly affected by both tillage treatment and cropping system, with those in no-till the greatest among tillage treatments and those in CC the greatest among cropping systems. Soil N and SOC levels were increased at deeper depths in the profile, especially in those tillage systems with the least amount of soil disturbance. Most significant was the fact that soil N and SOC was sequestered deeper in the profile, which would strongly suggest that N and C at these depths would be less likely to be lost if the soil was tilled.", "keywords": ["2. Zero hunger", "Soil nitrogen", "Soil organic carbon", "Cropping systems", "Plant Sciences", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "630", "6. Clean water", "Tillage"], "contacts": [{"organization": "Varvel, Gary E., Wilhelm, Wallace,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.still.2011.03.005"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20and%20Tillage%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.still.2011.03.005", "name": "item", "description": "10.1016/j.still.2011.03.005", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.still.2011.03.005"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-07-01T00:00:00Z"}}, {"id": "10.1016/j.tplants.2023.01.008", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:28Z", "type": "Journal Article", "created": "2023-02-27", "title": "Heritage genetics for adaptation to marginal soils in barley", "description": "Future crops need to be sustainable in the face of climate change. Modern barley varieties have been bred for high productivity and quality; however, they have suffered considerable genetic erosion, losing crucial genetic diversity. This renders modern cultivars vulnerable to climate change and stressful environments. We highlight the potential to tailor crops to a specific environment by utilising diversity inherent in an adapted landrace population. Tapping into natural biodiversity, while incorporating information about local environmental and climatic conditions, allows targeting of key traits and genotypes, enabling crop production in marginal soils. We outline future directions for the utilisation of genetic resources maintained in landrace collections to support sustainable agriculture through germplasm development via the use of genomics technologies and big data.", "keywords": ["Crops", " Agricultural", "0301 basic medicine", "EFFICIENCY", "genetic resilience", "IMPACT", "/dk/atira/pure/subjectarea/asjc/1100/1110", "630", "12. Responsible consumption", "diversity", "Soil", "03 medical and health sciences", "FUTURE", "MANGANESE DEFICIENCY", "PLANTS", "2. Zero hunger", "580", "0303 health sciences", "barley landraces", "Hordeum", "Agriculture", "15. Life on land", "LANDRACES", "Adaptation", " Physiological", "CULTIVARS", "CLIMATE", "Plant Breeding", "climate change", "marginal soil", "13. Climate action", "name=Plant Science", "local adaptation", "RESISTANCE"]}, "links": [{"href": "https://doi.org/10.1016/j.tplants.2023.01.008"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Trends%20in%20Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.tplants.2023.01.008", "name": "item", "description": "10.1016/j.tplants.2023.01.008", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.tplants.2023.01.008"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-05-01T00:00:00Z"}}, {"id": "10.1017/s1742170511000317", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:33Z", "type": "Journal Article", "created": "2011-07-22", "title": "Soil Fertility And Crop Yields In Long-Term Organic And Conventional Cropping Systems In Eastern Nebraska", "description": "Abstract<p>Organic agriculture aims to build soil quality and provide long-term benefits to people and the environment; however, organic practices may reduce crop yields. This long-term study near Mead, NE was conducted to determine differences in soil fertility and crop yields among conventional and organic cropping systems between 1996 and 2007. The conventional system (CR) consisted of corn (Zea maysL.) or sorghum (Sorghum bicolor(L.) Moench)\uffe2\uff80\uff93soybean (Glycine max(L.) Merr.)\uffe2\uff80\uff93sorghum or corn\uffe2\uff80\uff93soybean, whereas the diversified conventional system (DIR) consisted of corn or sorghum\uffe2\uff80\uff93sorghum or corn\uffe2\uff80\uff93soybean\uffe2\uff80\uff93winter wheat (wheat,Triticum aestivumL.). The animal manure-based organic system (OAM) consisted of soybean\uffe2\uff80\uff93corn or sorghum\uffe2\uff80\uff93soybean\uffe2\uff80\uff93wheat, while the forage-based organic system (OFG) consisted of alfalfa (Medicago sativaL.)\uffe2\uff80\uff93alfalfa\uffe2\uff80\uff93corn or sorghum\uffe2\uff80\uff93wheat. Averaged across sampling years, soil organic matter content (OMC), P, pH, Ca, K, Mg and Zn in the top 15 cm of soil were greatest in the OAM system. However, by 2008 OMC was not different between the two organic systems despite almost two times greater carbon inputs in the OAM system. Corn, sorghum and soybean average annual yields were greatest in either of the two conventional systems (7.65, 6.36 and 2.60 Mg ha\uffe2\uff88\uff921, respectively), whereas wheat yields were greatest in the OAM system (3.07 Mg ha\uffe2\uff88\uff921). Relative to the mean of the conventional systems, corn yields were reduced by 13 and 33% in the OAM and OFG systems, respectively. Similarly, sorghum yields in the OAM and OFG systems were reduced by 16 and 27%, respectively. Soybean yields were 20% greater in the conventional systems compared with the OAM system. However, wheat yields were 10% greater in the OAM system compared with the conventional DIR system and 23% greater than yield in the OFG system. Alfalfa in the OFG system yielded an average of 7.41 Mg ha\uffe2\uff88\uff921annually. Competitive yields of organic wheat and alfalfa along with the soil fertility benefits associated with animal manure and perennial forage suggest that aspects of the two organic systems be combined to maximize the productivity and sustainability of organic cropping systems.</p>", "keywords": ["2. Zero hunger", "Organic matter content", "Organic farming", "Animal manure", "Soil phosphorus", "Plant Sciences", "Botany", "Plant Biology", "04 agricultural and veterinary sciences", "Horticulture", "15. Life on land", "Perennial forage", "Nutrient budgets", "630", "6. Clean water", "Agronomy and Crop Sciences", "Long-term crop rotations", "0401 agriculture", " forestry", " and fisheries", "Agricultural Science"], "contacts": [{"organization": "Wortman, Samuel E., Galusha, Tomie D., Mason, Stephen C., Francis, Charles A.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1017/s1742170511000317"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Renewable%20Agriculture%20and%20Food%20Systems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1017/s1742170511000317", "name": "item", "description": "10.1017/s1742170511000317", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1017/s1742170511000317"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-07-22T00:00:00Z"}}, {"id": "10.1017/wsc.2018.4", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-08-25T16:16:33Z", "type": "Journal Article", "created": "2018-04-04", "title": "Assessment Of Management Options On Striga Infestation And Maize Grain Yield In Kenya", "description": "Abstract<p>The parasitic purple witchweed [Striga hermonthica(Del.) Benth.] is a serious constraint to maize production in sub-Saharan Africa, especially in poor soils. VariousStrigaspp. control measures have been developed, but these have not been assessed in an integrated system. This study was conducted to evaluate a set of promising technologies forS. hermonthicamanagement in western Kenya. We evaluated three maize genotypes either intercropped with peanut (Arachis hypogaeaL.), soybean [Glycine max(L.) Merr.], or silverleaf desmodium [Desmodium uncinatum(Jacq.) DC] or as a sole crop at two locations under artificialS. hermonthicainfestation and at three locations under naturalS. hermonthicainfestation between 2011 and 2013. Combined ANOVA showed significant (P&lt;0.05) cropping system and cropping system by environment interactions for most traits measured. Grain yield was highest for maize grown in soybean rotation (3,672 kg ha\uffe2\uff88\uff921) under artificial infestation and inD. uncinatumand peanut cropping systems (3,203 kg ha\uffe2\uff88\uff921and 3,193 kg ha\uffe2\uff88\uff921) under natural infestation. Grain yield was highest for theStrigaspp.-resistant hybrid under both methods of infestation. A lower number of emergedS. hermonthicaplants per square meter were recorded at 10 and 12 wk after planting on maize grown underD. uncinatumin the artificialS. hermonthicainfestation. A combination of herbicide-resistant maize varieties intercropped with legumes was a more effective method forS. hermonthicacontrol than individual-component technologies. Herbicide-resistant andStrigaspp.-resistant maize integrated with legumes would help reduce theStrigaspp. seedbank in the soil. Farmers should be encouraged to adopt an integrated approach to controlStrigaspp. for better maize yields.</p>", "keywords": ["0106 biological sciences", "striga infestation", "legumes", "Infestation", "Plant Science", "Striga", "maize", "01 natural sciences", "Article", "Agricultural and Biological Sciences", "Symbiotic Nitrogen Fixation in Legumes", "peanuts", "Biology", "Sowing", "Sorghum", "Taxonomy", "2. Zero hunger", "Crop Diversity", "Life Sciences", "cropping systems", "Biodiversity", "04 agricultural and veterinary sciences", "Strigolactone Signaling in Plant Interactions", "15. Life on land", "yield", "Agronomy", "soybeans", "Striga hermonthica", "0401 agriculture", " forestry", " and fisheries", "Intercropping in Agricultural Systems", "varieities", "intercropping", "Agronomy and Crop Science"]}, "links": [{"href": "https://doi.org/10.1017/wsc.2018.4"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Weed%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1017/wsc.2018.4", "name": "item", "description": "10.1017/wsc.2018.4", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1017/wsc.2018.4"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-04-04T00:00:00Z"}}, {"id": "10.1023/a:1009783625188", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-08-25T16:16:38Z", "type": "Journal Article", "created": "2002-12-22", "description": "Short-term studies of tree growth at elevated CO2 suggest that forest productivity may increase as atmospheric CO2 concentrations rise, although low soil N availability may limit the magnitude of this response. There have been few studies of growth and N2 fixation by symbiotic N 2-fixing woody species under elevated CO 2 and the N inputs these plants could provide to forest ecosystems in the future. We investigated the effect of twice ambient CO 2 on growth, tissue N accretion, and N2 fixation of nodulatedAlnus glutinosa (L.) Gaertn. grown under low soil N conditions for 160 d. Root, nodule, stem, and leaf dry weight (DW) and N accretion increased significantly in response to elevated CO2. Whole-plant biomass and N accretion increased 54% and 40%, respectively. Delta- 15 Na nalysis of leaf tissue indicated that plants from both treatments derived similar proportions of their total N from symbiotic fixation suggesting that elevated CO 2 grown plants fixed approximately 40% more N than did ambient CO 2 grown plants. Leaves from both CO2 treatments showed similar relative declines in leaf N content prior to autumnal leaf abscission, but total N in leaf litter increased 24% in elevated compared to ambient CO2 grown plants. These results suggest that with rising atmospheric CO2 N2-fixing woody species will accumulate greater amounts of biomass N through N2 fixation and may enhance soil N levels by increased litter N inputs.", "keywords": ["Delta 15 N Analysis", "0106 biological sciences", "Nitrogen Fixation", "Science", "Plant Sciences", "Ecology and Evolutionary Biology", "Life Sciences", "Carbon Dioxide Enrichment", "Root Nodules", "Black Alder", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "Christoph S. Vogel, Christoph S. Vogel, Richard B. Thomas, Peter S. Curtis, Peter S. Curtis,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1023/a:1009783625188"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1023/a:1009783625188", "name": "item", "description": "10.1023/a:1009783625188", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1023/a:1009783625188"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1997-05-01T00:00:00Z"}}, {"id": "10.1038/s41559-017-0325-1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:51Z", "type": "Journal Article", "created": "2017-09-29", "title": "Diversity-dependent temporal divergence of ecosystem functioning in experimental ecosystems", "description": "The effects of biodiversity on ecosystem functioning generally increase over time, but the underlying processes remain unclear. Using 26 long-term grassland and forest experimental ecosystems, we demonstrate that biodiversity-ecosystem functioning relationships strengthen mainly by greater increases in functioning in high-diversity communities in grasslands and forests. In grasslands, biodiversity effects also strengthen due to decreases in functioning in low-diversity communities. Contrasting trends across grasslands are associated with differences in soil characteristics.", "keywords": ["0106 biological sciences", "570", "grassland ecology", "Ecology and Evolutionary Biology", "Plant Sciences", "577", "soil biodiversity", "Biodiversity", "Forests", "15. Life on land", "Grassland", "01 natural sciences", "Article", "XXXXXX - Unknown", "Life Science", "ddc:570", "forest ecology", "Forest Sciences", "Institut f\u00fcr Biochemie und Biologie", "Ecosystem", "biodiversity", "ecosystem health"]}, "links": [{"href": "https://www.nature.com/articles/s41559-017-0325-1.pdf"}, {"href": "https://doi.org/10.1038/s41559-017-0325-1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Ecology%20%26amp%3B%20Evolution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41559-017-0325-1", "name": "item", "description": "10.1038/s41559-017-0325-1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41559-017-0325-1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-10-02T00:00:00Z"}}, {"id": "10.1038/s41598-019-55251-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:53Z", "type": "Journal Article", "created": "2019-12-16", "title": "Assessing the impact of global climate changes on irrigated wheat yields and water requirements in a semi-arid environment of Morocco", "description": "Abstract<p>The present work aims to quantify the impact of climate change (CC) on the grain yields of irrigated cereals and their water requirements in the Tensift region of Morocco. The Med-CORDEX (MEDiterranean COordinated Regional Climate Downscaling EXperiment) ensemble runs under scenarios RCP4.5 (Representative Concentration Pathway) and RCP8.5 are first evaluated and disaggregated using the quantile-quantile approach. The impact of CC on the duration of the main wheat phenological stages based on the degree-day approach is then analyzed. The results show that the rise in air temperature causes a shortening of the development cycle of up to 50 days. The impacts of rising temperature and changes in precipitation on wheat yields are next evaluated, based on the AquaCrop model, both with and without taking into account the fertilizing effect of CO2. As expected, optimal wheat yields will decrease on the order of 7 to 30% if CO2 concentration rise is not considered. The fertilizing effect of CO2 can counterbalance yield losses, since optimal yields could increase by 7% and 13% respectively at mid-century for the RCP4.5 and RCP8.5 scenarios. Finally, water requirements are expected to decrease by 13 to 42%, mainly in response to the shortening of the cycle. This decrease is associated with a change in temporal patterns, with the requirement peak coming two months earlier than under current conditions.</p>", "keywords": ["Water resources", "Atmospheric sciences", "Agricultural Irrigation", "environment/Bioclimatology", "550", "Representative Concentration Pathways", "Adaptation to Climate Change in Agriculture", "Arid", "Rain", "[SDV.SA.AGRO]Life Sciences [q-bio]/Agricultural sciences/Agronomy", "Climate Change and Variability Research", "Plant Science", "Precipitation", "02 engineering and technology", "01 natural sciences", "Agricultural and Biological Sciences", "Downscaling", "Climate change", "Quantile", "Triticum", "Climatology", "2. Zero hunger", "Global and Planetary Change", "Ecology", "Geography", "Temperature", "Life Sciences", "Geology", "Morocco", "Phenology", "[SDV.EE.BIO]Life Sciences [q-bio]/Ecology", "Seeds", "Physical Sciences", "Metallurgy", "Desert Climate", "Impacts of Elevated CO2 and Ozone on Plant Physiology", "Climate Change", "0207 environmental engineering", "Yield (engineering)", "Climate model", "Article", "Environmental science", "FOS: Economics and business", "Meteorology", "FOS: Mathematics", "Econometrics", "[SDU.STU.HY]Sciences of the Universe [physics]/Earth Sciences/Hydrology", "Biology", "Ecology", " Evolution", " Behavior and Systematics", "0105 earth and related environmental sciences", "[SDV.SA.AGRO] Life Sciences [q-bio]/Agricultural sciences/Agronomy", "Water", "FOS: Earth and related environmental sciences", "Carbon Dioxide", "15. Life on land", "Agronomy", "Materials science", "[SDV.EE.BIO] Life Sciences [q-bio]/Ecology", " environment/Bioclimatology", "13. Climate action", "FOS: Biological sciences", "Environmental Science", "[SDU.STU.HY] Sciences of the Universe [physics]/Earth Sciences/Hydrology", "Crop Yield", "Mediterranean climate", "Mathematics", "Climate Modeling"]}, "links": [{"href": "https://www.nature.com/articles/s41598-019-55251-2.pdf"}, {"href": "https://doi.org/10.1038/s41598-019-55251-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Scientific%20Reports", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41598-019-55251-2", "name": "item", "description": "10.1038/s41598-019-55251-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41598-019-55251-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-16T00:00:00Z"}}, {"id": "10.1111/nph.15014", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:57Z", "type": "Journal Article", "created": "2018-02-09", "title": "Native soils with their microbiotas elicit a state of alert in tomato plants", "description": "Summary<p>   <p>Several studies have investigated soil microbial biodiversity, but understanding of the mechanisms underlying plant responses to soil microbiota remains in its infancy. Here, we focused on tomato (Solanum lycopersicum), testing the hypothesis that plants grown on native soils display different responses to soil microbiotas.</p>  <p>Using transcriptomics, proteomics, and biochemistry, we describe the responses of two tomato genotypes (susceptible or resistant to Fusarium oxysporum f. sp. lycopersici) grown on an artificial growth substrate and two native soils (conducive and suppressive to Fusarium).</p>  <p>Native soils affected tomato responses by modulating pathways involved in responses to oxidative stress, phenol biosynthesis, lignin deposition, and innate immunity, particularly in the suppressive soil. In tomato plants grown on steam\uffe2\uff80\uff90disinfected soils, total phenols and lignin decreased significantly. The inoculation of a mycorrhizal fungus partly rescued this response locally and systemically. Plants inoculated with the fungal pathogen showed reduced disease symptoms in the resistant genotype in both soils, but the susceptible genotype was partially protected from the pathogen only when grown on the suppressive soil.</p>  <p>The \uffe2\uff80\uff98state of alert\uffe2\uff80\uff99 detected in tomatoes reveals novel mechanisms operating in plants in native soils and the soil microbiota appears to be one of the drivers of these plant responses.</p>  </p>", "keywords": ["0301 basic medicine", "Proteome", "Propanols", "Arbuscular mycorrhizal fungi", "arbuscular mycorrhizal fungi", "tomato", "Lignin", "Models", " Biological", "Plant Roots", "defence responses", "Tomato", "Soil", "03 medical and health sciences", "Solanum lycopersicum", "Gene Expression Regulation", " Plant", "Stress", " Physiological", "microbiota", "Plant Immunity", "Soil Microbiology", "suppressive and conducive soils", "susceptible and resistant genotypes", "2. Zero hunger", "0303 health sciences", "Defence responses", "Microbiota", "15. Life on land", "Lignin biosynthesis", "Gene Ontology", "Susceptible and resistant genotypes", "Arbuscular mycorrhizal fungi; Defence responses; Lignin biosynthesis; Microbiota; Suppressive and conducive soils; Susceptible and resistant genotypes; Tomato; Physiology; Plant Science", "Suppressive and conducive soils", "Transcriptome", "lignin biosynthesis"]}, "links": [{"href": "https://iris.unito.it/bitstream/2318/1660820/1/Chialva%20et%20al%20Iris.pdf"}, {"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.15014"}, {"href": "https://doi.org/10.1111/nph.15014"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.15014", "name": "item", "description": "10.1111/nph.15014", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.15014"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-02-09T00:00:00Z"}}, {"id": "10.1038/s41467-019-14197-9", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:50Z", "type": "Journal Article", "created": "2020-01-24", "title": "High-quality genome sequence of white lupin provides insight into soil exploration and seed quality", "description": "Abstract<p>White lupin (Lupinus albus L.) is an annual crop cultivated for its protein-rich seeds. It is adapted to poor soils due to the production of cluster roots, which are made of dozens of determinate lateral roots that drastically improve soil exploration and nutrient acquisition (mostly phosphate). Using long-read sequencing technologies, we provide a high-quality genome sequence of a cultivated accession of white lupin (2n\uffe2\uff80\uff89=\uffe2\uff80\uff8950, 451\uffe2\uff80\uff89Mb), as well as de novo assemblies of a landrace and a wild relative. We describe a modern accession displaying increased soil exploration capacity through early establishment of lateral and cluster roots. We also show how seed quality may have been impacted by domestication in term of protein profiles and alkaloid content. The availability of a high-quality genome assembly together with companion genomic and transcriptomic resources will enable the development of modern breeding strategies to increase and stabilize white lupin yield.</p>", "keywords": ["Repetitive Sequences", " Nucleic Acid/genetics", "0301 basic medicine", "[SDV]Life Sciences [q-bio]", "Plant Roots/genetics", "Gene Dosage", "Plant Science", "Crop", "Alkaloids/chemistry", "Plant Roots", "Gene", "Repetitive Sequences", "630", "Agricultural and Biological Sciences", "Domestication", "Soil", "Models", "Symbiotic Nitrogen Fixation in Legumes", "Gene Duplication", "[SDV.BV] Life Sciences [q-bio]/Vegetal Biology", "http://aims.fao.org/aos/agrovoc/c_3224", "Plant Proteins/metabolism", "Plant Proteins", "2. Zero hunger", "0303 health sciences", "Genome", "Q", "http://aims.fao.org/aos/agrovoc/c_27583", "Life Sciences", "Transcriptome/genetics", "http://aims.fao.org/aos/agrovoc/c_92382", "Polymorphism", " Single Nucleotide/genetics", "Lupinus", "[SDV] Life Sciences [q-bio]", "Protein Crop", "Seeds", "http://aims.fao.org/aos/agrovoc/c_5956", "White (mutation)", "Single Nucleotide/genetics", "Sequence Analysis", "Genome", " Plant", "expression des g\u00e8nes", "http://aims.fao.org/aos/agrovoc/c_4464", "Synteny/genetics", "Evolution", "Lupin Seeds", "Science", "Centromere", "Lupinus/genetics", "Polymorphism", " Single Nucleotide", "Article", "g\u00e9nomique", "Evolution", " Molecular", "Evolution and Nutritional Properties of Lupin Seeds", "physiologie v\u00e9g\u00e9tale", "03 medical and health sciences", "Alkaloids", "Genetic", "Nucleic Acid/genetics", "Seeds/physiology", "Centromere/genetics", "Genetics", "[SDV.BV]Life Sciences [q-bio]/Vegetal Biology", "Polymorphism", "Biology", "Ecology", " Evolution", " Behavior and Systematics", "Repetitive Sequences", " Nucleic Acid", "Sequence assembly", "http://aims.fao.org/aos/agrovoc/c_25189", "Ecotype", "Models", " Genetic", "g\u00e9nome", "Botany", "Molecular", "Genetic Variation", "Molecular Sequence Annotation", "Plant", "DNA", "Sequence Analysis", " DNA", "s\u00e9quence nucl\u00e9otidique", "15. Life on land", "http://aims.fao.org/aos/agrovoc/c_27527", "Agronomy", "Plant Leaves", "Evolution and Ecology of Endophyte-Grass Symbiosis", "Lupinus albus", "FOS: Biological sciences", "Genomic Structural Variation", "Plant Leaves/metabolism", "Gene expression", "Transcriptome", "am\u00e9lioration des plantes"]}, "links": [{"href": "https://www.nature.com/articles/s41467-019-14197-9.pdf"}, {"href": "https://doi.org/10.1038/s41467-019-14197-9"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Communications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41467-019-14197-9", "name": "item", "description": "10.1038/s41467-019-14197-9", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41467-019-14197-9"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-01-24T00:00:00Z"}}, {"id": "10.1038/s41477-023-01583-x", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-08-25T16:16:51Z", "type": "Journal Article", "created": "2023-12-04", "title": "Subtilase-mediated biogenesis of the expanded family of SERINE RICH ENDOGENOUS PEPTIDES", "description": "Plant signalling peptides are typically released from larger precursors by proteolytic cleavage to regulate plant growth, development and stress responses. Recent studies reported the characterization of a divergent family of Brassicaceae-specific peptides, SERINE RICH ENDOGENOUS PEPTIDES (SCOOPs), and their perception by the leucine-rich repeat receptor kinase MALE DISCOVERER 1-INTERACTING RECEPTOR-LIKE KINASE 2 (MIK2). Here, we reveal that the SCOOP family is highly expanded, containing at least 50 members in the Columbia-0 reference Arabidopsis thaliana genome. Notably, perception of these peptides is strictly MIK2-dependent. How bioactive SCOOP peptides are produced, and to what extent their perception is responsible for the multiple physiological roles associated with MIK2 are currently unclear. Using N-terminomics, we validate the N-terminal cleavage site of representative PROSCOOPs. The cleavage sites are determined by conserved motifs upstream of the minimal SCOOP bioactive epitope. We identified subtilases necessary and sufficient to process PROSCOOP peptides at conserved cleavage motifs. Mutation of these subtilases, or their recognition motifs, suppressed PROSCOOP cleavage and associated overexpression phenotypes. Furthermore, we show that higher-order mutants of these subtilases show phenotypes reminiscent of mik2 null mutant plants, consistent with impaired PROSCOOP biogenesis, and demonstrating biological relevance of SCOOP perception by MIK2. Together, this work provides insights into the molecular mechanisms underlying the functions of the recently identified SCOOP peptides and their receptor MIK2.", "keywords": ["570", "Arabidopsis Proteins", "[SDV]Life Sciences [q-bio]", "Arabidopsis", "Receptors", " Cell Surface", "580 Plants (Botany)", "[SDV] Life Sciences [q-bio]", "10126 Department of Plant and Microbial Biology", "1110 Plant Science", "Taverne", "Brassicaceae", "Serine", "Life Science", "10211 Zurich-Basel Plant Science Center", "Peptides", "Protein Kinases"]}, "links": [{"href": "https://www.nature.com/articles/s41477-023-01583-x.pdf"}, {"href": "https://hal.science/hal-04394015/file/NaturePlants_subtilase_scoop_2023_revised.pdf"}, {"href": "https://doi.org/10.1038/s41477-023-01583-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Plants", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41477-023-01583-x", "name": "item", "description": "10.1038/s41477-023-01583-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41477-023-01583-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-12-04T00:00:00Z"}}, {"id": "10.1093/treephys/23.12.805", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:24Z", "type": "Journal Article", "created": "2012-01-20", "title": "Free-Air Co2 Enrichment (Face) Enhances Biomass Production In A Short-Rotation Poplar Plantation", "description": "This paper investigates the possible contribution of Short Rotation Cultures (SRC) to carbon sequestration in both current and elevated atmospheric CO2 concentrations ([CO2]). A dense poplar plantation (1 x 1 m) was exposed to a [CO2] of 550 ppm in Central Italy using the free-air CO2 enrichment (FACE) technique. Three species of Populus were examined, namely P. alba L., P. nigra L. and P. x euramericana Dode (Guinier). Aboveground woody biomass of trees exposed to elevated [CO2] for three growing seasons increased by 15 to 27%, depending on species. As a result, light-use efficiency increased. Aboveground biomass allocation was unaffected, and belowground biomass also increased under elevated [CO2] conditions, by 22 to 38%. Populus nigra, with total biomass equal to 62.02 and 72.03 Mg ha-1 in ambient and elevated [CO2], respectively, was the most productive species, although its productivity was stimulated least by atmospheric CO2 enrichment. There was greater depletion of inorganic nitrogen from the soil after three growing seasons in elevated [CO2], but no effect of [CO2] on stem wood density, which differed significantly only among species.", "keywords": ["soil n-availability", "0106 biological sciences", "Physiology", "pinus-sylvestris", "fine roots", "hybrid poplar", "Plant Science", "Plant Roots", "01 natural sciences", "7. Clean energy", "Trees", "light-use efficiency", "carbon-dioxide enrichment", "Biomass", "Photosynthesis", "elevated atmospheric co2", "crown architecture", "net primary production", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "Populus", "13. Climate action", "populus-grandidentata", "0401 agriculture", " forestry", " and fisheries", "Plant Shoots"]}, "links": [{"href": "https://doi.org/10.1093/treephys/23.12.805"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Tree%20Physiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/treephys/23.12.805", "name": "item", "description": "10.1093/treephys/23.12.805", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/treephys/23.12.805"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2003-08-01T00:00:00Z"}}, {"id": "10.1038/srep34786", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:16:56Z", "type": "Journal Article", "created": "2016-10-10", "title": "Contrasting Effects Of Nitrogen And Phosphorus Addition On Soil Respiration In An Alpine Grassland On The Qinghai-Tibetan Plateau", "description": "Abstract<p>High soil organic carbon content, extensive root biomass, and low nutrient availability make alpine grasslands an important ecosystem for assessing the influence of nutrient enrichment on soil respiration (SR). We conducted a four-year (2009\uffe2\uff80\uff932012) field experiment in an alpine grassland on the Qinghai-Tibetan Plateau to examine the individual and combined effects of nitrogen (N, 100\uffe2\uff80\uff89kg ha\uffe2\uff88\uff921year\uffe2\uff88\uff921) and phosphorus (P, 50\uffe2\uff80\uff89kg ha\uffe2\uff88\uff921year\uffe2\uff88\uff921) addition on SR. We found that both N and P addition did not affect the overall growing-season SR but effects varied by year: with N addition SR increased in the first year but decreased during the last two years. However, while P addition did not affect SR during the first two years, SR increased during the last two years. No interactive effects of N and P addition were observed, and both N addition and P addition reduced heterotrophic respiration during the last year of the experiment. N and P addition affected SR via different processes: N mainly affected heterotrophic respiration, whereas P largely influenced autotrophic respiration. Our results highlight the divergent effects of N and P addition on SR and address the important potential of P enrichment for regulating SR and the carbon balance in alpine grasslands.</p>", "keywords": ["Biomass (ecology)", "0106 biological sciences", "Mechanics and Transport in Unsaturated Soils", "Nitrogen", "Soil Science", "Organic chemistry", "Plant Science", "Thermal Effects on Soil", "01 natural sciences", "Article", "Environmental science", "Agricultural and Biological Sciences", "Engineering", "Soil water", "Genetics", "Biology", "Ecosystem", "Civil and Structural Engineering", "2. Zero hunger", "Soil Fertility", "Ecology", "Bacteria", "Respiration", "Botany", "Life Sciences", "Plant Nutrient Uptake and Signaling Pathways", "Phosphorus", "Soil respiration", "04 agricultural and veterinary sciences", "15. Life on land", "Grassland", "Soil carbon", "Agronomy", "Chemistry", "13. Climate action", "FOS: Biological sciences", "Physical Sciences", "Heterotroph", "Growing season", "0401 agriculture", " forestry", " and fisheries", "Soil Carbon Dynamics and Nutrient Cycling in Ecosystems", "Animal science", "Nutrient"]}, "links": [{"href": "https://doi.org/10.1038/srep34786"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Scientific%20Reports", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/srep34786", "name": "item", "description": "10.1038/srep34786", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/srep34786"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-10-10T00:00:00Z"}}, {"id": "10.1046/j.1365-3040.1998.00327.x", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-08-25T16:17:00Z", "type": "Journal Article", "created": "2003-03-12", "title": "Response Of Sugar Beet (Beta Vulgaris L.) Yield And Biochemical Composition To Elevated Co2 And Temperature At Two Nitrogen Applications", "description": "<p>Effects on sugar beet (Beta vulgaris L.) of current and elevated CO2 and temperature alone and in combination and their interactions with abundant and deficient nitrogen supply (HN and LN, respectively) have been studied in three experiments in 1993, 1994 and 1995. Averaged over all experiments, elevated CO2 (600 \uffce\uffbcmol mol\uffe2\uff80\uff931 in 1993 and 700 \uffce\uffbcmol mol\uffe2\uff80\uff931 in 1994 and 1995) increased total dry mass at final harvest by 21% (95% confidence interval (CI) = 21, 22) and 11% (CI = 6, 15) and root dry mass by 26% (CI = 19, 32) and 12% (CI = 6, 18) for HN and LN plants, respectively. Warmer temperature decreased total dry mass by 11% (CI = \uffe2\uff80\uff93 15, \uffe2\uff80\uff93 7) and 9% (CI = \uffe2\uff80\uff93 15, \uffe2\uff80\uff93 5) and root dry mass by 7% (CI = \uffe2\uff80\uff93 12, \uffe2\uff80\uff93 2) and 7% (CI = \uffe2\uff80\uff93 10, 0) for HN and LN plants, respectively. There was no significant interaction between temperature and CO2 on total or root dry mass. Neither elevated CO2 nor temperature significantly affected sucrose concentration per unit root dry mass. Concentrations of glycinebetaine and of amino acids, measured as \uffce\uffb1\uffe2\uff80\uff90amino\uffe2\uff80\uff90N, decreased in elevated CO2 in both N applications; glycinebetaine by 13% (CI = \uffe2\uff80\uff93 21, \uffe2\uff80\uff93 5) and 16% (CI = \uffe2\uff80\uff93 24, \uffe2\uff80\uff93 8) and \uffce\uffb1\uffe2\uff80\uff90amino\uffe2\uff80\uff90N by 24% (CI = \uffe2\uff80\uff93 36, \uffe2\uff80\uff93 11) and 16% (CI = \uffe2\uff80\uff93 26, \uffe2\uff80\uff93 5) for HN and LN, respectively. Warmer temperature increased \uffce\uffb1\uffe2\uff80\uff90amino\uffe2\uff80\uff90N, by 76% (CI = 50, 107) for HN and 21% (CI = 7, 36) for LN plants, but not glycinebetaine.</p>", "keywords": ["2. Zero hunger", "0106 biological sciences", "Plant Sciences", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "01 natural sciences", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1046/j.1365-3040.1998.00327.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%2C%20Cell%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1046/j.1365-3040.1998.00327.x", "name": "item", "description": "10.1046/j.1365-3040.1998.00327.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1046/j.1365-3040.1998.00327.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1998-08-01T00:00:00Z"}}, {"id": "10.1046/j.1529-8817.2003.00722.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:01Z", "type": "Journal Article", "created": "2004-12-24", "title": "Soil Organic Carbon Content And Composition Of 130-Year Crop, Pasture And Forest Land-Use Managements", "description": "Abstract<p>Conversion of former agricultural land to grassland and forest ecosystems is a suggested option for mitigation of increased atmospheric CO2. A Sharpsburg prairie loess soil (fine, smectitic, mesic Typic Argiudoll) provided treatments to study the impact of long\uffe2\uff80\uff90term land use on soil organic carbon (SOC) content and composition for a 130\uffe2\uff80\uff90year\uffe2\uff80\uff90old cropped, pasture and forest comparison. The forest and pasture land use significantly retained more SOC, 46% and 25%, respectively, compared with cropped land use, and forest land use increased soil C content by 29% compared with the pasture. Organic C retained in the soils was a function of the soil N content (r=0.98,P&lt;0.001) and the soil carbohydrate (CH) concentration (r=0.96,P&lt;0.001). Statistical analyses found that soil aggregation processes increased as organic C content increased in the forest and pasture soils, but not in the cropped soil. SOC was composed of similar percentages of CHs (49%, 42% and 51%), amino acids (22%, 15% and 18%), lipids (2.3%, 2.3% and 2.9%) and unidentified C (21%, 29% and 27%), but differed for phenolic acids (PAs) (5.7%, 11.6% and 1.0%) for the pasture, forest and cropped soils, respectively. The results suggested that the majority of the surface soil C sequestered in the long\uffe2\uff80\uff90term pasture and forest soils was identified as C of plant origin through the use of CH and PA biomarkers, although the increase in amino sugar concentration of microbial origin indicates a greater increase in microbial inputs in the three subsoils. The practice of permanent pastures and afforestation of agricultural land showed long\uffe2\uff80\uff90term potential for potential mitigation of atmospheric CO2.</p>", "keywords": ["2. Zero hunger", "amino acids", "550", "Plant Sciences", "carbohydrates", "lignin", "organic C", "04 agricultural and veterinary sciences", "15. Life on land", "630", "6. Clean water", "land-use change", "lipids", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "phenolic acids"], "contacts": [{"organization": "Martens, Dean A., Reedy, Thomas E., Lewis, David T., (retired),", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1046/j.1529-8817.2003.00722.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1046/j.1529-8817.2003.00722.x", "name": "item", "description": "10.1046/j.1529-8817.2003.00722.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1046/j.1529-8817.2003.00722.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2003-12-19T00:00:00Z"}}, {"id": "10.3389/fpls.2017.01263", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:19:08Z", "type": "Journal Article", "created": "2017-07-19", "title": "Application of Mycorrhiza and Soil from a Permaculture System Improved Phosphorus Acquisition in Naranjilla", "description": "Naranjilla (Solanum quitoense) is a perennial shrub plant mainly cultivated in Ecuador, Colombia, and Central America where it represents an important cash crop. Current cultivation practices not only cause deforestation and large-scale soil degradation but also make plants highly susceptible to pests and diseases. The use of arbuscular mycorrhizal fungi (AMF) can offer a possibility to overcome these problems. AMF can act beneficially in various ways, for example by improving plant nutrition and growth, water relations, soil structure and stability and protection against biotic and abiotic stresses. In this study, the impact of AMF inoculation on growth and nutrition parameters of naranjilla has been assessed. For inoculation three European reference AMF strains (Rhizoglomus irregulare, Claroideoglomus claroideum, and Cetraspora helvetica) and soils originating from three differently managed naranjilla plantations in Ecuador (conventional, organic, and permaculture) have been used. This allowed for a comparison of the performance of exotic AMF strains (reference strains) versus native consortia contained in the three soils used as inocula. To study fungal communities present in the three soils, trap cultures have been established using naranjilla as host plant. The community structures of AMF and other fungi inhabiting the roots of trap cultured naranjilla were assessed using next generation sequencing (NGS) methods. The growth response experiment has shown that two of the three reference AMF strains, a mixture of the three and soil from a permaculture site led to significantly better acquisition of phosphorus (up to 104%) compared to uninoculated controls. These results suggest that the use of AMF strains and local soils as inoculants represent a valid approach to improve nutrient uptake efficiency of naranjilla and consequently to reduce inputs of mineral fertilizers in the cultivation process. Improved phosphorus acquisition after inoculation with permaculture soil might have been caused by a higher abundance of AMF and the presence of Piriformospora indica as revealed by NGS. A higher frequency of AMF and enhanced root colonization rates in the trap cultures supplemented with permaculture soil highlight the importance of diverse agricultural systems for soil quality and crop production.", "keywords": ["next generation sequencing", "2. Zero hunger", "0301 basic medicine", "permaculture", "0303 health sciences", "Piriformospora indica", "Crop health", " quality", " protection", "Plant culture", "naranjilla", "arbuscular mycorrhizal fungi", "Plant Science", "15. Life on land", "fungal communities", "SB1-1110", "Soil", "03 medical and health sciences", "naranjilla", " arbuscular mycorrhizal fungi", " fungal communities", " Piriformospora indica", " farming practices", " permaculture", " next generation sequencing", "farming practices", "Sciences exactes et naturelles"]}, "links": [{"href": "https://dipot.ulb.ac.be/dspace/bitstream/2013/333899/1/doi_317543.pdf"}, {"href": "https://doi.org/10.3389/fpls.2017.01263"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fpls.2017.01263", "name": "item", "description": "10.3389/fpls.2017.01263", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fpls.2017.01263"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-07-19T00:00:00Z"}}, {"id": "10.1080/15592324.2018.1464855", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:18Z", "type": "Journal Article", "created": "2018-04-27", "title": "Not only priming: Soil microbiota may protect tomato from root pathogens", "description": "An increasing number of studies have investigated soil microbial biodiversity. However, the mechanisms regulating plant responses to soil microbiota are largely unknown. A previous work tested the hypothesis that tomato plants grown on native soils with their complex microbiotas respond differently from tomato growing in a sterile substrate. Two soils, suppressive or conducive to Fusarium oxysporum f. sp. lycopersici (FOL), and two genotypes susceptible and resistant to the same pathogen were considered. The work highlighted that the two tested soil microbiotas, irrespectively of their taxonomic composition, elicit the PAMP-triggered Immunity Pathway, the first level of plant defence, as well as an increased lignin synthesis, leading to an active protection when FOL is present in the soil. Here, we tested the expression of a panel of genes involved in Effector-Triggered Immunity (ETI), demonstrating that soil microbiota, beside genotype, affects plant resistance to FOL also modulating this pathway.", "keywords": ["suppressive and conducive soils", "susceptible and resistant genotypes", "0301 basic medicine", "2. Zero hunger", "0303 health sciences", "defence responses; Fusarium oxysporum f. sp. lycopersici; arbuscular mycorrhizal fungi; gene expression; lignin biosynthesis; microbiota; suppressive and conducive soils; susceptible and resistant genotypes; tomato; Plant Science", "arbuscular mycorrhizal fungi", "tomato", "15. Life on land", "defence responses", "03 medical and health sciences", "Fusarium", "Solanum lycopersicum", "microbiota", "gene expression", "Fusarium oxysporum f. sp. lycopersici", "lignin biosynthesis", "Soil Microbiology", "Plant Diseases"]}, "links": [{"href": "https://iris.unito.it/bitstream/2318/1677702/2/Chialva_et_al_2018_PostPrint.pdf"}, {"href": "https://www.tandfonline.com/doi/pdf/10.1080/15592324.2018.1464855"}, {"href": "https://doi.org/10.1080/15592324.2018.1464855"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Signaling%20%26amp%3B%20Behavior", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1080/15592324.2018.1464855", "name": "item", "description": "10.1080/15592324.2018.1464855", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1080/15592324.2018.1464855"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-04-27T00:00:00Z"}}, {"id": "10.1071/bt04154", "type": "Feature", "geometry": null, "properties": {"license": "unspecified", "updated": "2026-08-25T16:17:04Z", "type": "Journal Article", "created": "2005-11-30", "title": "Changes In Soil Carbon And Soil Nitrogen After Tree Clearing In The Semi-Arid Rangelands Of Queensland", "description": "<p>  Changes in soil carbon (C) and nitrogen (N) stocks following tree clearing were estimated at 32 rangeland sites in central and southern Queensland by using paired-site sampling. When corrected for soil bulk-density differences at each site, average soil C across all sites decreased after tree clearing by 8.0% for 0\uffe2\uff80\uff930.3-m soil depth, and by 5.4% for 0\uffe2\uff80\uff931.0-m depth; there were corresponding declines in soil C of 2.5 and 3.5tha\uffe2\uff80\uff931, respectively. Mean soil C stocks (excluding surface litter, extractable roots and coarse charcoal) at uncleared sites were 29.5tha\uffe2\uff80\uff931 for 0\uffe2\uff80\uff930.3-m soil depth, and 62.5tha\uffe2\uff80\uff931 for 0\uffe2\uff80\uff931.0-m depth. Mean soil C stocks (0\uffe2\uff80\uff930.3m) were 41% of the mean total C for the soil\uffe2\uff80\uff93plant system (soil + litter/woody debris + stand biomass) at uncleared sites. Soil C decline (0\uffe2\uff80\uff930.3m) accounted for approximately 7% of the average total C lost because of land clearing across all sites. Soil C stocks at uncleared sites were correlated with tree basal area, clay content and soil phosphorus (P) content. Changes in soil C after tree clearing were strongly correlated to initial soil C contents at the uncleared sites, and were associated with particular vegetation groups and soil types. Changes in soil N were strongly correlated with changes in soil C; however, the average change in soil N across all sites was not significant. Given the size of the C and N pools in rangeland soils, the factors that influence soil C and soil N dynamics in rangeland systems need to be better understood for the effective management of C stocks in these soils. </p>", "keywords": ["Ecology", "Behavior and Systematics", "Evolution", "1110 Plant Science", "0401 agriculture", " forestry", " and fisheries", "Plant Science", "04 agricultural and veterinary sciences", "15. Life on land", "1105 Ecology"]}, "links": [{"href": "https://doi.org/10.1071/bt04154"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Australian%20Journal%20of%20Botany", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1071/bt04154", "name": "item", "description": "10.1071/bt04154", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1071/bt04154"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2005-01-01T00:00:00Z"}}, {"id": "10.1093/plcell/koac263", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:24Z", "type": "Journal Article", "created": "2022-08-26", "title": "Burning questions for a warming and changing world: 15 unknowns in plant abiotic stress", "description": "Abstract                <p>We present unresolved questions in plant abiotic stress biology as posed by 15 research groups with expertise spanning eco-physiology to cell and molecular biology. Common themes of these questions include the need to better understand how plants detect water availability, temperature, salinity, and rising carbon dioxide (CO2) levels; how environmental signals interface with endogenous signaling and development (e.g. circadian clock and flowering time); and how this integrated signaling controls downstream responses (e.g. stomatal regulation, proline metabolism, and growth versus defense balance). The plasma membrane comes up frequently as a site of key signaling and transport events (e.g. mechanosensing and lipid-derived signaling, aquaporins). Adaptation to water extremes and rising CO2 affects hydraulic architecture and transpiration, as well as root and shoot growth and morphology, in ways not fully understood. Environmental adaptation involves tradeoffs that limit ecological distribution and crop resilience in the face of changing and increasingly unpredictable environments. Exploration of plant diversity within and among species can help us know which of these tradeoffs represent fundamental limits and which ones can be circumvented by bringing new trait combinations together. Better defining what constitutes beneficial stress resistance in different contexts and making connections between genes and phenotypes, and between laboratory and field observations, are overarching challenges.</p", "keywords": ["0301 basic medicine", "570", "Physiological", "Climate Change", "ROOT-SYSTEM ARCHITECTURE", "Plant Biology & Botany", "Plant Biology", "Plant Science", "Stress", "03 medical and health sciences", "Stress", " Physiological", "Genetics", "Life Science", "580", "2. Zero hunger", "0303 health sciences", "CLIMATE-CHANGE", "Biology and Life Sciences", "Water", "Plant Transpiration", "Cell Biology", "ABSCISIC-ACID", "Carbon Dioxide", "Plants", "15. Life on land", "ddc:", "LEAF HYDRAULIC CONDUCTANCE", "SALT STRESS", "Climate Action", "ENABLES DROUGHT ESCAPE", "FLOWERING-LOCUS-T", "13. Climate action", "ARABIDOPSIS-THALIANA", "Biochemistry and Cell Biology", "WATER-USE EFFICIENCY", "PROLINE DEHYDROGENASE CONTRIBUTES", "Focus on Climate Change and Plant Abiotic Stress"]}, "links": [{"href": "https://air.unimi.it/bitstream/2434/936666/2/burning%20questions%20for%20a%20warming%20world%20-resubmission.pdf"}, {"href": "https://air.unimi.it/bitstream/2434/936666/3/Burning%20questions%20for%20a%20warming%20world-resubmission%20Figures.pdf"}, {"href": "https://air.unimi.it/bitstream/2434/936666/4/koac263.pdf"}, {"href": "https://escholarship.org/content/qt48k7s53n/qt48k7s53n.pdf"}, {"href": "https://doi.org/10.1093/plcell/koac263"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/The%20Plant%20Cell", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/plcell/koac263", "name": "item", "description": "10.1093/plcell/koac263", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/plcell/koac263"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-08-26T00:00:00Z"}}, {"id": "10.1073/pnas.2201072119", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:09Z", "type": "Journal Article", "created": "2022-07-18", "title": "Ethylene inhibits rice root elongation in compacted soil via ABA- and auxin-mediated mechanisms", "description": "<p>             Soil compaction represents a major agronomic challenge, inhibiting root elongation and impacting crop yields. Roots use ethylene to sense soil compaction as the restricted air space causes this gaseous signal to accumulate around root tips. Ethylene inhibits root elongation and promotes radial expansion in compacted soil, but its mechanistic basis remains unclear. Here, we report that ethylene promotes abscisic acid (ABA) biosynthesis and cortical cell radial expansion. Rice mutants of ABA biosynthetic genes had attenuated cortical cell radial expansion in compacted soil, leading to better penetration. Soil compaction-induced ethylene also up-regulates the auxin biosynthesis gene             OsYUC8             . Mutants lacking OsYUC8 are better able to penetrate compacted soil. The auxin influx transporter OsAUX1 is also required to mobilize auxin from the root tip to the elongation zone during a root compaction response. Moreover,             osaux1             mutants penetrate compacted soil better than the wild-type roots and do not exhibit cortical cell radial expansion. We conclude that ethylene uses auxin and ABA as downstream signals to modify rice root cell elongation and radial expansion, causing root tips to swell and reducing their ability to penetrate compacted soil.           </p", "keywords": ["roots", "0301 basic medicine", "570", "Cell biology", "Arabidopsis", "Biophysics", "Plant Science", "Plant Roots", "Biochemistry", "Gene", "Catalysis", "Mixed Function Oxygenases", "Molecular Mechanisms of Plant Development and Regulation", "soil compaction", "Agricultural and Biological Sciences", "Soil", "Abscisic acid", "Ethylene", "03 medical and health sciences", "aba", "ethylene", "Auxin", "Elongation", "Biology", "Plant Proteins", "580", "2. Zero hunger", "0303 health sciences", "Multidisciplinary", "Indoleacetic Acids", "Mutant", "Life Sciences", "Oryza", "Plant Nutrient Uptake and Signaling Pathways", "Biological Sciences", "Ethylenes", "15. Life on land", "Materials science", "Root Aeration", "Chemistry", "ABA", "Plant Responses to Flooding Stress", "Ultimate tensile strength", "Mutation", "Metallurgy", "auxin", "Abscisic Acid"]}, "links": [{"href": "https://pnas.org/doi/pdf/10.1073/pnas.2201072119"}, {"href": "https://doi.org/10.1073/pnas.2201072119"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20National%20Academy%20of%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1073/pnas.2201072119", "name": "item", "description": "10.1073/pnas.2201072119", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1073/pnas.2201072119"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-07-18T00:00:00Z"}}, {"id": "10.1093/aob/mcaa181", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:21Z", "type": "Journal Article", "created": "2020-10-07", "title": "Significance of root hairs for plant performance under contrasting field conditions and water deficit", "description": "AbstractBackground and Aims<p>Previous laboratory studies have suggested selection for root hair traits in future crop breeding to improve resource use efficiency and stress tolerance. However, data on the interplay between root hairs and open-field systems, under contrasting soils and climate conditions, are limited. As such, this study aims to experimentally elucidate some of the impacts that root hairs have on plant performance on a field scale.</p>Methods<p>A field experiment was set up in Scotland for two consecutive years, under contrasting climate conditions and different soil textures (i.e. clay loam vs. sandy loam). Five barley (Hordeum vulgare) genotypes exhibiting variation in root hair length and density were used in the study. Root hair length, density and rhizosheath weight were measured at several growth stages, as well as shoot biomass, plant water status, shoot phosphorus (P) accumulation and grain yield.</p>Key Results<p>Measurements of root hair density, length and its correlation with rhizosheath weight highlighted trait robustness in the field under variable environmental conditions, although significant variations were found between soil textures as the growing season progressed. Root hairs did not confer a notable advantage to barley under optimal conditions, but under soil water deficit root hairs enhanced plant water status and stress tolerance resulting in a less negative leaf water potential and lower leaf abscisic acid concentration, while promoting shoot P accumulation. Furthermore, the presence of root hairs did not decrease yield under optimal conditions, while root hairs enhanced yield stability under drought.</p>Conclusions<p>Selecting for beneficial root hair traits can enhance yield stability without diminishing yield potential, overcoming the breeder\uffe2\uff80\uff99s dilemma of trying to simultaneously enhance both productivity and resilience. Therefore, the maintenance or enhancement of root hairs can represent a key trait for breeding the next generation of crops for improved drought tolerance in relation to climate change.</p", "keywords": ["construction", "0301 basic medicine", "EP/M020355/1", "Supplementary Data", "QH301 Biology", "drought tolerance", "/dk/atira/pure/subjectarea/asjc/1100/1110", "610", "Rural and Environmental Science and Analytical Services (RESAS)", "Plant Roots", "630", "root hairs", "QH301", "Soil", "03 medical and health sciences", "646809DIMR", "agricultural sustainability", "SDG 13 - Climate Action", "BB/L025620/1", "rhizosheath", "phosphorus", "NE/L00237/1", "Hordeum vulgare", "580", "2. Zero hunger", "Natural Environment Research Council (NERC)", "grain yield", "rhizoshealth", "barley", "Water", "soil texture", "Hordeum", "15. Life on land", "NA160430", "6. Clean water", "Droughts", "Plant Breeding", "root traits", "Engineering and Physical Sciences Research Council (EPSRC)", "Biotechnology and Biological Sciences Research Council (BBSRC)", "Other", "plant water status", "name=Plant Science", "BB/P004180/1", "BB/L025825/1"]}, "links": [{"href": "https://repository.uwl.ac.uk/id/eprint/7652/1/12050%20Naveed.pdf"}, {"href": "https://eprints.soton.ac.uk/453165/1/marinsignificance2020.pdf"}, {"href": "https://eprints.soton.ac.uk/453165/2/mcaa181.pdf"}, {"href": "https://doi.org/10.1093/aob/mcaa181"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Annals%20of%20Botany", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/aob/mcaa181", "name": "item", "description": "10.1093/aob/mcaa181", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/aob/mcaa181"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-10-10T00:00:00Z"}}, {"id": "10.1093/jxb/erac437", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:23Z", "type": "Journal Article", "created": "2022-11-02", "title": "In situcontrol of root\u2013bacteria interactions using optical trapping in transparent soil", "description": "Abstract<p>Bacterial attachment on root surfaces is an important step preceding the colonization or internalization and subsequent infection of plants by pathogens. Unfortunately, bacterial attachment is not well understood because the phenomenon is difficult to observe. Here we assessed whether this limitation could be overcome using optical trapping approaches. We have developed a system based on counter-propagating beams and studied its ability to guide Pectobacterium atrosepticum (Pba) cells to different root cell types within the interstices of transparent soils. Bacterial cells were successfully trapped and guided to root hair cells, epidermal cells, border cells, and tissues damaged by laser ablation. Finally, we used the system to quantify the bacterial cell detachment rate of Pba cells on root surfaces following reversible attachment. Optical trapping techniques could greatly enhance our ability to deterministically characterize mechanisms linked to attachment and formation of biofilms in the rhizosphere.</p", "keywords": ["name=Physiology", "0301 basic medicine", "/dk/atira/pure/subjectarea/asjc/1300/1314", "570", "0303 health sciences", "Optical Tweezers", "Bacteria", "Lactuca sativa", "Pectobacterium", "/dk/atira/pure/subjectarea/asjc/1100/1110", "Attachment", "Plants", "Plant Roots/metabolism", "colonization", "Plant Roots", "Soil", "03 medical and health sciences", "Pectobacterium atrosepticum", "Rhizosphere", "optical trapping", "name=Plant Science", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1093/jxb/erac437"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Experimental%20Botany", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/jxb/erac437", "name": "item", "description": "10.1093/jxb/erac437", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/jxb/erac437"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-02T00:00:00Z"}}, {"id": "10.1093/plphys/kiaa049", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:24Z", "type": "Journal Article", "created": "2020-05-31", "title": "Distinct signaling routes mediate intercellular and intracellular rhizobial infection in Lotus japonicus", "description": "Abstract<p>Rhizobial infection of legume roots during development of nitrogen fixing root nodules occurs either intracellularly though plant derived infection threads traversing the epidermal and cortical cell layers to deliver the bacteria or intercellularly via bacterial entry between epidermal plant cells. Although, around 25% of all legume genera are postulated to be intercellularly infected, the pathways and mechanisms supporting this process has remained virtually unexplored due to lack of genetically amenable legumes that have this infection mode. In this study, we report that the model legume Lotus japonicus is infected intercellularly by Rhizobium sp. IRBG74 and demonstrate that the resources available in Lotus enable insight into the genetic requirements and the fine-tuning of the pathway governing intercellular infection. Inoculation of Lotus mutants shows that Ern1 and RinRK1 are dispensable for intercellular infection in contrast to intracellular infection. Other symbiotic genes, including Nfr5, SymRK, CCaMK, Epr3, Cyclops, Nin, Nsp1, Nsp2, Cbs and Vpy1 are equally important for both entry modes. Comparative RNAseq analysis of roots inoculated with IRBG74 revealed a distinctive transcriptome response compared to intracellular colonization. In particular, a number of cytokinin-related genes were differentially regulated. Corroborating this observation cyp735A and ipt4 cytokinin biosynthesis mutants were significantly affected in their nodulation with IRBG74 while lhk1 cytokinin receptor mutants did not form any nodules. These results indicate that a differential requirement for cytokinin signalling conditions intercellular rhizobial entry and highlight the distinct modalities of the inter- and intra-cellular infection mechanisms.</p>", "keywords": ["name=Physiology", "580", "0301 basic medicine", "/dk/atira/pure/subjectarea/asjc/1300/1314", "0303 health sciences", "/dk/atira/pure/subjectarea/asjc/1300/1311", "571", "Regular Issue", "name=Genetics", "/dk/atira/pure/subjectarea/asjc/1100/1110", "Plant Roots", "03 medical and health sciences", "Gene Expression Regulation", " Plant", "Calcium-Calmodulin-Dependent Protein Kinases", "Lotus", "name=Plant Science", "Root Nodules", " Plant", "Plant Proteins", "Rhizobium", "Signal Transduction"]}, "links": [{"href": "http://academic.oup.com/plphys/article-pdf/185/3/1131/37166752/kiaa049.pdf"}, {"href": "https://doi.org/10.1093/plphys/kiaa049"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Physiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/plphys/kiaa049", "name": "item", "description": "10.1093/plphys/kiaa049", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/plphys/kiaa049"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-05-31T00:00:00Z"}}, {"id": "10.1101/2020.05.29.124313", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:28Z", "type": "Journal Article", "created": "2020-05-31", "title": "Distinct signalling routes mediates intercellular and intracellular rhizobial infection in Lotus japonicus", "description": "Abstract<p>Rhizobial infection of legume roots during development of nitrogen fixing root nodules occurs either intracellularly though plant derived infection threads traversing the epidermal and cortical cell layers to deliver the bacteria or intercellularly via bacterial entry between epidermal plant cells. Although, around 25% of all legume genera are postulated to be intercellularly infected, the pathways and mechanisms supporting this process has remained virtually unexplored due to lack of genetically amenable legumes that have this infection mode. In this study, we report that the model legume Lotus japonicus is infected intercellularly by Rhizobium sp. IRBG74 and demonstrate that the resources available in Lotus enable insight into the genetic requirements and the fine-tuning of the pathway governing intercellular infection. Inoculation of Lotus mutants shows that Ern1 and RinRK1 are dispensable for intercellular infection in contrast to intracellular infection. Other symbiotic genes, including Nfr5, SymRK, CCaMK, Epr3, Cyclops, Nin, Nsp1, Nsp2, Cbs and Vpy1 are equally important for both entry modes. Comparative RNAseq analysis of roots inoculated with IRBG74 revealed a distinctive transcriptome response compared to intracellular colonization. In particular, a number of cytokinin-related genes were differentially regulated. Corroborating this observation cyp735A and ipt4 cytokinin biosynthesis mutants were significantly affected in their nodulation with IRBG74 while lhk1 cytokinin receptor mutants did not form any nodules. These results indicate that a differential requirement for cytokinin signalling conditions intercellular rhizobial entry and highlight the distinct modalities of the inter- and intra-cellular infection mechanisms.</p", "keywords": ["name=Physiology", "580", "0301 basic medicine", "/dk/atira/pure/subjectarea/asjc/1300/1314", "0303 health sciences", "/dk/atira/pure/subjectarea/asjc/1300/1311", "571", "Regular Issue", "name=Genetics", "/dk/atira/pure/subjectarea/asjc/1100/1110", "Plant Roots", "03 medical and health sciences", "Gene Expression Regulation", " Plant", "Calcium-Calmodulin-Dependent Protein Kinases", "Lotus", "name=Plant Science", "Root Nodules", " Plant", "Plant Proteins", "Rhizobium", "Signal Transduction"]}, "links": [{"href": "http://academic.oup.com/plphys/article-pdf/185/3/1131/37166752/kiaa049.pdf"}, {"href": "https://doi.org/10.1101/2020.05.29.124313"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Physiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1101/2020.05.29.124313", "name": "item", "description": "10.1101/2020.05.29.124313", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1101/2020.05.29.124313"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-05-31T00:00:00Z"}}, {"id": "10.1101/2022.10.10.511665", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-08-25T16:17:28Z", "type": "Journal Article", "created": "2022-10-13", "title": "A suberized exodermis is required for tomato drought tolerance", "description": "SUMMARY<p>Plant roots integrate environmental signals and developmental programs using exquisite spatiotemporal control. This is apparent in the deposition of suberin, an apoplastic diffusion barrier, which regulates the entry and exit of water, solutes and gases, and is environmentally plastic. Suberin is considered a hallmark of endodermal differentiation, but we find that it is absent in the tomato endodermis during normal development. Instead, suberin is present in the exodermis, a cell type that is absent in the model organismArabidopsis thaliana. Here, we uncover genes driving exodermal suberization and describe its effects on drought responses in tomato, unravelling the similarities and differences with the paradigmatic Arabidopsis endodermis. Cellular resolution imaging, gene expression, and mutant analyses reveal loss of this program from the endodermis, and its co-option in the exodermis. Functional genetic analyses of the tomato MYB92 transcription factor and ASFT enzyme demonstrate the importance of exodermal suberin for a plant water-deficit response. Controlling the degree of exodermal suberization could be a new strategy for breeding climate-resilient plants.</p", "keywords": ["580", "0301 basic medicine", "2. Zero hunger", "570", "0303 health sciences", "Arabidopsis", "Water", "Plant Science", "15. Life on land", "Plant Roots", "Article", "6. Clean water", "03 medical and health sciences", "Solanum lycopersicum", "Cell Wall", "13. Climate action", "Drought Resistance", "Solanum lycopersicum/genetics; Drought Resistance; Plant Roots/metabolism; Cell Wall/metabolism; Arabidopsis/genetics; Arabidopsis/metabolism; Water/metabolism"]}, "links": [{"href": "https://escholarship.org/content/qt6g69h27x/qt6g69h27x.pdf"}, {"href": "https://doi.org/10.1101/2022.10.10.511665"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/SSRN%20Electronic%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1101/2022.10.10.511665", "name": "item", "description": "10.1101/2022.10.10.511665", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1101/2022.10.10.511665"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "10.1111/gcb.16989", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:41Z", "type": "Journal Article", "created": "2023-10-27", "title": "Shifts in soil ammonia\u2010oxidizing community maintain the nitrogen stimulation of nitrification across climatic conditions", "description": "Abstract<p>Anthropogenic nitrogen (N) loading alters soil ammonia\uffe2\uff80\uff90oxidizing archaea (AOA) and bacteria (AOB) abundances, likely leading to substantial changes in soil nitrification. However, the factors and mechanisms determining the responses of soil AOA:AOB and nitrification to N loading are still unclear, making it difficult to predict future changes in soil nitrification. Herein, we synthesize\uffc2\uffa068 field studies around the world to evaluate the impacts of N loading on soil ammonia oxidizers and nitrification. Across a wide range of biotic and abiotic factors, climate is the most important driver of the responses of AOA:AOB to N loading. Climate does not directly affect the N\uffe2\uff80\uff90stimulation of nitrification, but does so via climate\uffe2\uff80\uff90related shifts in AOA:AOB. Specifically, climate modulates the responses of AOA:AOB to N loading by affecting soil pH, N\uffe2\uff80\uff90availability and moisture. AOB play a dominant role in affecting nitrification in dry climates, while the impacts from AOA can exceed AOB in humid climates. Together, these results suggest that climate\uffe2\uff80\uff90related shifts in soil ammonia\uffe2\uff80\uff90oxidizing community maintain the N\uffe2\uff80\uff90stimulation of nitrification, highlighting the importance of microbial community composition in mediating the responses of the soil N cycle to N loading.</p", "keywords": ["550", "Nitrogen", "2306 Global and Planetary Change", "ammonia oxidizers", "580 Plants (Botany)", "nitrogen addition", "333", "Nitrogen/analysis", "2300 General Environmental Science", "Soil", "10126 Department of Plant and Microbial Biology", "Ammonia", "Climate change", "10211 Zurich-Basel Plant Science Center", "Soil Microbiology", "Phylogeny", "Soil/chemistry", "2. Zero hunger", "Nitrogen addition", "info:eu-repo/classification/ddc/550", "ddc:550", "Microbial community structure", "15. Life on land", "Nitrification", "Archaea", "6. Clean water", "nitrification", "Ammonia oxidizers", "Earth sciences", "climate change", "13. Climate action", "microbial community structure", "2304 Environmental Chemistry", "soil properties", "Soil properties", "2303 Ecology", "Oxidation-Reduction"]}, "links": [{"href": "https://doi.org/10.1111/gcb.16989"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.16989", "name": "item", "description": "10.1111/gcb.16989", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.16989"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-10-27T00:00:00Z"}}, {"id": "10.1111/gcbb.12128", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:42Z", "type": "Journal Article", "created": "2013-10-31", "title": "Soil And Crop Response To Stover Removal From Rainfed And Irrigated Corn", "description": "Abstract<p>Excessive corn (Zea mays L.) stover removal for biofuel and other uses may adversely impact soil and crop production. We assessed the effects of stover removal at 0, 25, 50, 75, and 100% from continuous corn on water erosion, corn yield, and related soil properties during a 3\uffe2\uff80\uff90year study under irrigated and no\uffe2\uff80\uff90tillage management practice on a Ulysses silt loam at Colby, irrigated and strip till management practice on a Hugoton loam at Hugoton, and rainfed and no\uffe2\uff80\uff90tillage management practice on a Woodson silt loam at Ottawa in Kansas, USA. The slope of each soil was &lt;1%. One year after removal, complete (100%) stover removal resulted in increased losses of sediment by 0.36\uffe2\uff80\uff930.47\uffc2\uffa0Mg\uffc2\uffa0ha\uffe2\uff88\uff921 at the irrigated sites, but, at the rainfed site, removal at rates as low as 50% resulted in increased sediment loss by 0.30\uffc2\uffa0Mg\uffc2\uffa0ha\uffe2\uff88\uff921 and sediment\uffe2\uff80\uff90associated carbon (C) by 0.29\uffc2\uffa0kg\uffc2\uffa0ha\uffe2\uff88\uff921. Complete stover removal reduced wet aggregate stability of the soil at the irrigated sites in the first year after removal, but, at the rainfed site, wet aggregate stability was reduced in all years. Stover removal at rates \uffe2\uff89\uffa5 50% resulted in reduced soil water content, increased soil temperature in summer by 3.5\uffe2\uff80\uff936.8\uffc2\uffa0\uffc2\uffb0C, and reduced temperature in winter by about 0.5\uffc2\uffa0\uffc2\uffb0C. Soil C pool tended to decrease and crop yields tended to increase with an increase in stover removal, but 3\uffc2\uffa0years after removal, differences were not significant. Overall, stover removal at rates \uffe2\uff89\uffa550% may enhance grain yield but may increase risks of water erosion and negatively affect soil water and temperature regimes in this region.</p>", "keywords": ["2. Zero hunger", "Plant Sciences", "Botany", "Life Sciences", "Plant Biology", "Agriculture", "04 agricultural and veterinary sciences", "Horticulture", "15. Life on land", "7. Clean energy", "irrigation", "333", "630", "6. Clean water", "soil aggregation", "Agronomy and Crop Sciences", "13. Climate action", "Other Plant Sciences", "0401 agriculture", " forestry", " and fisheries", "stover removal", "water erosion", "soil carbon", "Agricultural Science"]}, "links": [{"href": "https://doi.org/10.1111/gcbb.12128"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcbb.12128", "name": "item", "description": "10.1111/gcbb.12128", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcbb.12128"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-10-31T00:00:00Z"}}, {"id": "10.1111/j.1365-3040.2010.02201.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:50Z", "type": "Journal Article", "created": "2010-06-21", "title": "Soil [N] modulates soil C cycling in CO2-fumigated tree stands: a meta-analysis", "description": "ABSTRACT<p>Under elevated atmospheric CO2 concentrations, soil carbon (C) inputs are typically enhanced, suggesting larger soil C sequestration potential. However, soil C losses also increase and progressive nitrogen (N) limitation to plant growth may reduce the CO2 effect on soil C inputs with time. We compiled a data set from 131 manipulation experiments, and used meta\uffe2\uff80\uff90analysis to test the hypotheses that: (1) elevated atmospheric CO2 stimulates soil C inputs more than C losses, resulting in increasing soil C stocks; and (2) that these responses are modulated by N. Our results confirm that elevated CO2 induces a C allocation shift towards below\uffe2\uff80\uff90ground biomass compartments. However, the increased soil C inputs were offset by increased heterotrophic respiration (Rh), such that soil C content was not affected by elevated CO2. Soil N concentration strongly interacted with CO2 fumigation: the effect of elevated CO2 on fine root biomass and \uffe2\uff80\uff93production and on microbial activity increased with increasing soil N concentration, while the effect on soil C content decreased with increasing soil N concentration. These results suggest that both plant growth and microbial activity responses to elevated CO2 are modulated by N availability, and that it is essential to account for soil N concentration in C cycling analyses.</p>", "keywords": ["0301 basic medicine", "Physiology", "Plant Science", "Fine root production", "Carbon Cycle", "Trees", "Soil", "03 medical and health sciences", "Microbial respiration", "microbial respiration", "XXXXXX - Unknown", "C sequestration", "SDG 13 - Climate Action", "Biomass", "Fertilizers", "Biology", "[CO] enrichment", "2. Zero hunger", "[SDU.OCEAN]Sciences of the Universe [physics]/Ocean", "0303 health sciences", "biomass", "[SDU.OCEAN] Sciences of the Universe [physics]/Ocean", " Atmosphere", "Atmosphere", "Root biomass", "Carbon Dioxide", "Nitrogen Cycle", "15. Life on land", "carbon sequestration", "N fertilization", "[SDU.ENVI] Sciences of the Universe [physics]/Continental interfaces", " environment", "nitrogen fertilizers", "roots (botany)", "13. Climate action", "[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces", "environment"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-3040.2010.02201.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%2C%20Cell%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-3040.2010.02201.x", "name": "item", "description": "10.1111/j.1365-3040.2010.02201.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-3040.2010.02201.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-11-12T00:00:00Z"}}, {"id": "10.1111/nph.12333", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:57Z", "type": "Journal Article", "created": "2013-05-30", "title": "Cumulative Response Of Ecosystem Carbon And Nitrogen Stocks To Chronic Co2exposure In A Subtropical Oak Woodland", "description": "Summary<p>   <p>Rising atmospheric carbon dioxide (CO2) could alter the carbon (C) and nitrogen (N) content of ecosystems, yet the magnitude of these effects are not well known. We examined C and N budgets of a subtropical woodland after 11\uffc2\uffa0yr of exposure to elevated CO2.</p>  <p>We used open\uffe2\uff80\uff90top chambers to manipulate CO2 during regrowth after fire, and measured C, N and tracer 15N in ecosystem components throughout the experiment.</p>  <p>Elevated CO2 increased plant C and tended to increase plant N but did not significantly increase whole\uffe2\uff80\uff90system C or N. Elevated CO2 increased soil microbial activity and labile soil C, but more slowly cycling soil C pools tended to decline. Recovery of a long\uffe2\uff80\uff90term 15N tracer indicated that CO2 exposure increased N losses and altered N distribution, with no effect on N inputs.</p>  <p>Increased plant C accrual was accompanied by higher soil microbial activity and increased C losses from soil, yielding no statistically detectable effect of elevated CO2 on net ecosystem C uptake. These findings challenge the treatment of terrestrial ecosystems responses to elevated CO2 in current biogeochemical models, where the effect of elevated CO2 on ecosystem C balance is described as enhanced photosynthesis and plant growth with decomposition as a first\uffe2\uff80\uff90order response.</p>  </p>", "keywords": ["Soil organic matter", "Long term experiment", "Elevated atmospheric CO2", "Florida scrub oak", "Scrub oak", "Research", "Plant Sciences", "Aboveground biomass", "Plant Biology", "Microbial communities", "04 agricultural and veterinary sciences", "Carbon Cycling", "15. Life on land", "Forest productivity", "Soil carbon", "Rhizosphere processes", "Terrestrial ecosystems", "Dioxide enrichment", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Elevated CO2", "Climate feedbacks", "Global change", "Subtropical woodland", "Nitrogen cycling"]}, "links": [{"href": "https://digitalcommons.odu.edu/context/biology_fac_pubs/article/1264/viewcontent/Day2013CumulativeResponseofEcosystemCarbonandNitrogenOCR.pdf"}, {"href": "https://doi.org/10.1111/nph.12333"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.12333", "name": "item", "description": "10.1111/nph.12333", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.12333"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-05-30T00:00:00Z"}}, {"id": "10.1111/nph.12409", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:57Z", "type": "Journal Article", "created": "2013-07-22", "title": "Fire, Hurricane And Carbon Dioxide: Effects On Net Primary Production Of A Subtropical Woodland", "description": "Summary<p>   <p>Disturbance affects most terrestrial ecosystems and has the potential to shape their responses to chronic environmental change.</p>  <p>Scrub\uffe2\uff80\uff90oak vegetation regenerating from fire disturbance in subtropical Florida was exposed to experimentally elevated carbon dioxide (CO2) concentration (+350\uffc2\uffa0\uffce\uffbcl\uffc2\uffa0l\uffe2\uff88\uff921) using open\uffe2\uff80\uff90top chambers for 11\uffc2\uffa0yr, punctuated by hurricane disturbance in year 8. Here, we report the effects of elevated CO2 on aboveground and belowground net primary productivity (NPP) and nitrogen (N) cycling during this experiment.</p>  <p>The stimulation of NPP and N uptake by elevated CO2 peaked within 2\uffc2\uffa0yr after disturbance by fire and hurricane, when soil nutrient availability was high. The stimulation subsequently declined and disappeared, coincident with low soil nutrient availability and with a CO2\uffe2\uff80\uff90induced reduction in the N concentration of oak stems.</p>  <p>These findings show that strong growth responses to elevated CO2 can be transient, are consistent with a progressively limited response to elevated CO2 interrupted by disturbance, and illustrate the importance of biogeochemical responses to extreme events in modulating ecosystem responses to global environmental change.</p>  </p>", "keywords": ["0106 biological sciences", "NITROGEN-USE EFFICIENCY", "Scrub oak ecosystem", "01 natural sciences", "Trees", "Quercus", "Soil", "nitrogen cycling", "oak woodland", "ECOSYSTEMS", "Global environmental change", "Biomass", "ROOT BIOMASS", "disturbance", "Florida scrub", "elevated CO2", "Elevated atmospheric CO2", "Plant Stems", "Cyclonic Storms", "Aboveground biomass", "FOREST PRODUCTIVITY", "Hurricane", "04 agricultural and veterinary sciences", "Nitrogen Cycle", "Fire", "Soil carbon", "LONG-TERM EXPOSURE", "Net primary productivity", "Long term exposure", "Florida", "Elevated CO2", "fire", "FLORIDA SCRUB", "ABOVEGROUND BIOMASS", "Nitrogen cycling", "TERRESTRIAL", "Oak woodland", "ELEVATED ATMOSPHERIC CO2", "Elevated CO 2", "Nitrogen", "hurricane", "Forest productivity", "Fires", "Terrestrial ecosystems", "SCRUB-OAK ECOSYSTEM", "Net primary productivity (NPP)", "Ecosystem", "Nitrogen use efficiency", "Atmosphere", "net primary productivity (NPP)", "Root biomass", "Plant Sciences", "global environmental change", "Disturbance", "Carbon Dioxide", "15. Life on land", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "SOIL CARBON"]}, "links": [{"href": "https://digitalcommons.odu.edu/context/biology_fac_pubs/article/1266/viewcontent/Day2013FireHurricaneandCarbonDioxideOCR.pdf"}, {"href": "https://doi.org/10.1111/nph.12409"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.12409", "name": "item", "description": "10.1111/nph.12409", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.12409"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-07-22T00:00:00Z"}}, {"id": "10.1111/nph.14634", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:57Z", "type": "Journal Article", "created": "2017-06-13", "title": "Circular linkages between soil biodiversity, fertility and plant productivity are limited to topsoil at the continental scale", "description": "Summary<p>   <p>The current theoretical framework suggests that tripartite positive feedback relationships between soil biodiversity, fertility and plant productivity are universal. However, empirical evidence for these relationships at the continental scale and across different soil depths is lacking.</p>  <p>We investigate the continental\uffe2\uff80\uff90scale relationships between the diversity of microbial and invertebrate\uffe2\uff80\uff90based soil food webs, fertility and above\uffe2\uff80\uff90ground plant productivity at 289 sites and two soil depths, that is 0\uffe2\uff80\uff9310 and 20\uffe2\uff80\uff9330\uffc2\uffa0cm, across Australia.</p>  <p>Soil biodiversity, fertility and plant productivity are strongly positively related in surface soils. Conversely, in the deeper soil layer, the relationships between soil biodiversity, fertility and plant productivity weaken considerably, probably as a result of a reduction in biodiversity and fertility with depth. Further modeling suggested that strong positive associations among soil biodiversity\uffe2\uff80\uff93fertility and fertility\uffe2\uff80\uff93plant productivity are limited to the upper soil layer (0\uffe2\uff80\uff9310\uffc2\uffa0cm), after accounting for key factors, such as distance from the equator, altitude, climate and physicochemical soil properties.</p>  <p>These findings highlight the importance of surface soil biodiversity for soil fertility, and suggest that any loss of surface soil could potentially break the links between soil biodiversity\uffe2\uff80\uff93fertility and/or fertility\uffe2\uff80\uff93plant productivity, which can negatively impact nutrient cycling and food production, upon which future generations depend.</p>  </p", "keywords": ["Soil biodiversity; plant productivity; terrestrial ecosystems; ecosystem functionality; bacteria; eukaryotes.", "0301 basic medicine", "Eukaryotes", "Climate", "Plant Development", "soil biodiversity", "Terrestrial ecosystems", "Soil", "03 medical and health sciences", "eukaryotes", "1110 Plant Science", "XXXXXX - Unknown", "plant productivity", "bacteria", "Ecosystem functionality", "Soil Microbiology", "2. Zero hunger", "0303 health sciences", "Bacteria", "Australia", "terrestrial ecosystems", "1314 Physiology", "Biodiversity", "15. Life on land", "Soil biodiversity", "ecosystem functionality", "Fertility", "ecosystems", "Plant productivity"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.14634"}, {"href": "https://doi.org/10.1111/nph.14634"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.14634", "name": "item", "description": "10.1111/nph.14634", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.14634"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-06-13T00:00:00Z"}}, {"id": "10.1111/nph.15516", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:57Z", "type": "Journal Article", "created": "2018-10-06", "title": "Imaging microstructure of the barley rhizosphere: particle packing and root hair influences", "description": "Summary<p>   <p>Soil adjacent to roots has distinct structural and physical properties from bulk soil, affecting water and solute acquisition by plants. Detailed knowledge on how root activity and traits such as root hairs affect the three\uffe2\uff80\uff90dimensional pore structure at a fine scale is scarce and often contradictory.</p>  <p>Roots of hairless barley (Hordeum vulgare L. cv Optic) mutant (NRH) and its wildtype (WT) parent were grown in tubes of sieved (&lt;250\uffc2\uffa0\uffce\uffbcm) sandy loam soil under two different water regimes. The tubes were scanned by synchrotron\uffe2\uff80\uff90based X\uffe2\uff80\uff90ray computed tomography to visualise pore structure at the soil\uffe2\uff80\uff93root interface. Pore volume fraction and pore size distribution were analysed vs distance within 1\uffc2\uffa0mm of the root surface.</p>  <p>Less dense packing of particles at the root surface was hypothesised to cause the observed increased pore volume fraction immediately next to the epidermis. The pore size distribution was narrower due to a decreased fraction of larger pores. There were no statistically significant differences in pore structure between genotypes or moisture conditions.</p>  <p>A model is proposed that describes the variation in porosity near roots taking into account soil compaction and the surface effect at the root surface.</p>  </p>", "keywords": ["name=Physiology", "STABILIZATION", "Physiology", "EP/M020355/1", "Supplementary Data", "QH301 Biology", "Plant Science", "Supplementary data available", "Plant Roots", "630", "noninvasive imaging", "Soil", "646809DIMR", "STRENGTH", "BB/J00868/1", "Hordeum vulgare", "2. Zero hunger", "04 agricultural and veterinary sciences", "Rhizosphere", "COMPRESSION", "soil structure", "Porosity", "European Research Council", "/dk/atira/pure/subjectarea/asjc/1300/1314", "/dk/atira/pure/subjectarea/asjc/1100/1110", "root hairs", "COMPACTION", "QH301", "Imaging", " Three-Dimensional", "synchrotron", "particle packing", "SOIL-STRUCTURE", "BB/L025620/1", "WATER-STRESS", "NE/L00237/1", "580", "ELONGATION", "Civil_env_eng", "Natural Environment Research Council (NERC)", "POROSITY", "Water", "Hordeum", "15. Life on land", "Engineering and Physical Sciences Research Council (EPSRC)", "Mutation", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "PENETRATION", "name=Plant Science", "rhizosphere", "Tomography", " X-Ray Computed", "MAIZE", "BB/P004180/1", "Synchrotrons", "BB/L025825/1"]}, "links": [{"href": "https://repository.uwl.ac.uk/id/eprint/5489/1/AS6808504337817661539338801587_content_1.pdf"}, {"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.15516"}, {"href": "https://doi.org/10.1111/nph.15516"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.15516", "name": "item", "description": "10.1111/nph.15516", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.15516"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-11-20T00:00:00Z"}}, {"id": "10.1111/nph.16312", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:58Z", "type": "Journal Article", "created": "2019-11-06", "title": "The helical motions of roots are linked to avoidance of particle forces in soil", "description": "Summary<p><p>Limitation to root growth results from forces required to overcome soil resistance to deformation. The variations in individual particle forces affects root development and often deflects the growth trajectory.</p><p>We have developed transparent soil and optical projection tomography microscopy systems where measurements of growth trajectory and particle forces can be acquired in a granular medium at a range of confining pressures. We developed image\uffe2\uff80\uff90processing pipelines to analyse patterns in root trajectories and a stochastic\uffe2\uff80\uff90mechanical theory to establish how root deflections relate to particle forces and thickening of the root.</p><p>Root thickening compensates for the increase in mean particle forces but does not prevent deflections from 5% of most extreme individual particle forces causing root deflection. The magnitude of deflections increases with pressure but they assemble into helices of conserved wavelength in response linked to gravitropism.</p><p>The study reveals mechanisms for the understanding of root growth in mechanically impeding soil conditions and provides insights relevant to breeding of drought\uffe2\uff80\uff90resistant crops.</p></p", "keywords": ["name=Physiology", "0106 biological sciences", "0301 basic medicine", "/dk/atira/pure/subjectarea/asjc/1300/1314", "570", "Mechanical stress", "transparent soil", "deflection", "/dk/atira/pure/subjectarea/asjc/1100/1110", "Biophysics", "Plant Roots", "01 natural sciences", "[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics", "Transparent Soil", "Gravitropism", "Soil", "03 medical and health sciences", "biophysics", "Transparent soil", "2. Zero hunger", "mechanical stress", "[PHYS.MECA.BIOM] Physics [physics]/Mechanics [physics]/Biomechanics [physics.med-ph]", "15. Life on land", "root", "Droughts", "Plant Breeding", "granular", "Root", "Deflection", "name=Plant Science"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.16312"}, {"href": "https://doi.org/10.1111/nph.16312"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.16312", "name": "item", "description": "10.1111/nph.16312", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.16312"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-12T00:00:00Z"}}, {"id": "10.1111/nph.18118", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:58Z", "type": "Journal Article", "created": "2022-03-26", "title": "Deciphering the role of specialist and generalist plant\u2013microbial interactions as drivers of plant\u2013soil feedback", "description": "Summary<p>Feedback between plants and soil microbial communities can be a powerful driver of vegetation dynamics. Plants elicit changes in the soil microbiome that either promote or suppress conspecifics at the same location, thereby regulating population density\uffe2\uff80\uff90dependence and species co\uffe2\uff80\uff90existence. Such effects are often attributed to the accumulation of host\uffe2\uff80\uff90specific antagonistic or beneficial microbiota in the rhizosphere. However, the identity and host\uffe2\uff80\uff90specificity of the microbial taxa involved are rarely empirically assessed. Here we review the evidence for host\uffe2\uff80\uff90specificity in plant\uffe2\uff80\uff90associated microbes and propose that specific plant\uffe2\uff80\uff93soil feedbacks can also be driven by generalists. We outline the potential mechanisms by which generalist microbial pathogens, mutualists and decomposers can generate differential effects on plant hosts and synthesize existing evidence to predict these effects as a function of plant investments into defence, microbial mutualists and dispersal. Importantly, the capacity of generalist microbiota to drive plant\uffe2\uff80\uff93soil feedbacks depends not only on the traits of individual plants but also on the phylogenetic and functional diversity of plant communities. Identifying factors that promote specialization or generalism in plant\uffe2\uff80\uff93microbial interactions and thereby modulate the impact of microbiota on plant performance will advance our understanding of the mechanisms underlying plant\uffe2\uff80\uff93soil feedback and the ways it contributes to plant co\uffe2\uff80\uff90existence.</p>", "keywords": ["0106 biological sciences", "0301 basic medicine", "570", "Physiology", "Plant Science", "litter decomposition", "plant\u2013soil interactions", "root exudates", "Plant Roots", "01 natural sciences", "Feedback", "Soil", "03 medical and health sciences", "Taverne", "functional traits", "Symbiosis", "Phylogeny", "Soil Microbiology", "580", "2. Zero hunger", "generalist microbiota", "Plants", "15. Life on land", "mycorrhizal fungi", "Rhizosphere", "fungal pathogens", "host-specificity"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.18118"}, {"href": "https://doi.org/10.1111/nph.18118"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.18118", "name": "item", "description": "10.1111/nph.18118", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.18118"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-04-16T00:00:00Z"}}, {"id": "10.1186/s12870-018-1411-5", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-08-25T16:18:09Z", "type": "Journal Article", "created": "2018-09-20", "title": "Root inoculation with Azotobacter chroococcum 76A enhances tomato plants adaptation to salt stress under low N conditions", "description": "The emerging roles of rhizobacteria in improving plant nutrition and stress protection have great potential for sustainable use in saline soils. We evaluated the function of the salt-tolerant strain Azotobacter chroococcum 76A as stress protectant in an important horticultural crop, tomato. Specifically we hypothesized that treatment of tomato plants with A. chroococcum 76A could improve plant performance under salinity stress and sub-optimal nutrient regimen.Inoculation of Micro Tom tomato plants with A. chroococcum 76A increased numerous growth parameters and also conferred protective effects under both moderate (50\u00a0mM NaCl) and severe (100\u00a0mM NaCl) salt stresses. These benefits were mostly observed under reduced nutrient regimen and were less appreciable in optimal nitrogen conditions. Therefore, the efficiency of A. chroococcum 76A was found to be dependent on the nutrient status of the rhizosphere. The expression profiles of LEA genes indicated that A. chroococcum 76A treated plants were more responsive to stress stimuli when compared to untreated controls. However, transcript levels of key nitrogen assimilation genes revealed that the optimal nitrogen regimen, in combination with the strain A. chroococcum 76A, may have saturated plant's ability to assimilate nitrogen.Roots inoculation with A. chroococcum 76A tomato promoted tomato plant growth, stress tolerance and nutrient assimilation efficiency under moderate and severe salinity. Inoculation with beneficial bacteria such as A. chroococcum 76A may be an ideal solution for low-input systems, where environmental constraints and limited chemical fertilization may affect the potential yield.", "keywords": ["0301 basic medicine", "Salinity", "Nitrogen", "Physiological", "Plant Science", "Plant Roots", "Tomato", "Micro tom", "03 medical and health sciences", "Solanum lycopersicum", "Gene Expression Regulation", " Plant", "Azotobacter chroococcum; Micro tom; Plant nutrition; Rhizobacteria; Salinity; Tomato; Adaptation", " Physiological; Azotobacter; Gene Expression Regulation", " Plant; Lycopersicon esculentum; Nitrogen; Plant Leaves; Plant Roots; Rhizosphere; Salt Tolerance; Symbiosis; Plant Science", "Rhizobacteria", "Adaptation", "Lycopersicon esculentum", "Plant nutrition", "Symbiosis", "2. Zero hunger", "0303 health sciences", "Botany", "Plant", "Salt Tolerance", "15. Life on land", "Adaptation", " Physiological", "6. Clean water", "3. Good health", "Plant Leaves", "Gene Expression Regulation", "QK1-989", "Azotobacter", "Rhizosphere", "Azotobacter chroococcum", "Research Article"]}, "links": [{"href": "https://www.iris.unina.it/bitstream/11588/728072/2/VanOosten2018_Article_RootInoculationWithAzotobacter.pdf"}, {"href": "http://link.springer.com/content/pdf/10.1186/s12870-018-1411-5.pdf"}, {"href": "https://doi.org/10.1186/s12870-018-1411-5"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/BMC%20Plant%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1186/s12870-018-1411-5", "name": "item", "description": "10.1186/s12870-018-1411-5", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1186/s12870-018-1411-5"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-09-20T00:00:00Z"}}, {"id": "10.1111/pce.14143", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:17:59Z", "type": "Journal Article", "created": "2021-06-17", "title": "Convergent evolution of gene regulatory networks underlying plant adaptations to dry environments", "description": "<p>p1Plants transitioned from an aquatic to a terrestrial lifestyle during their evolution. On land, fluctuations on water availability in the environment became one of the major problems they encountered. The appearance of morpho-physiological adaptations to cope with and tolerate water loss from the cells was undeniably useful to survive on dry land. Some of these adaptations, such as carbon concentrating mechanisms (CCMs), desiccation tolerance (DT) and root impermeabilization, appeared in multiple plant lineages. Despite being crucial for evolution on land, it has been unclear how these adaptations convergently evolved in the various plant lineages. Recent advances on whole genome and transcriptome sequencing are revealing that co-option of genes and gene regulatory networks (GRNs) is a common feature underlying the convergent evolution of these adaptations. In this review we address how the study of CCMs and DT have provided insight into convergent evolution of GRNs underlying plant adaptation to dry environments, and how these insights could be applied to currently emerging understanding of evolution of root impermeabilization through different barrier cell types. We discuss examples of co-option, conservation, and innovation of genes and GRNs at the cell, tissue and organ levels revealed by recent phylogenomic (comparative genomic) and comparative transcriptomic studies.</p>", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Physiology", "desiccation tolerance", "exodermis", "Adaptation", " Biological", "Reviews", "Plant Science", "comparative genomics", "Plants", "15. Life on land", "Genes", " Plant", "Biological Evolution", "03 medical and health sciences", "apoplastic barriers", "Gene Regulatory Networks", "Desert Climate"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/pce.14143"}, {"href": "https://doi.org/10.1111/pce.14143"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%2C%20Cell%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/pce.14143", "name": "item", "description": "10.1111/pce.14143", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/pce.14143"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-06-17T00:00:00Z"}}, {"id": "10.1126/sciadv.adj8016", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:18:01Z", "type": "Journal Article", "created": "2023-11-29", "title": "Connecting the multiple dimensions of global soil fungal diversity", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>How the multiple facets of soil fungal diversity vary worldwide remains virtually unknown, hindering the management of this essential species-rich group. By sequencing high-resolution DNA markers in over 4000 topsoil samples from natural and human-altered ecosystems across all continents, we illustrate the distributions and drivers of different levels of taxonomic and phylogenetic diversity of fungi and their ecological groups. We show the impact of precipitation and temperature interactions on local fungal species richness (alpha diversity) across different climates. Our findings reveal how temperature drives fungal compositional turnover (beta diversity) and phylogenetic diversity, linking them with regional species richness (gamma diversity). We integrate fungi into the principles of global biodiversity distribution and present detailed maps for biodiversity conservation and modeling of global ecological processes.</p></article>", "keywords": ["Supplementary Data", "biodiversity", " fungi", " ecology", "QH301 Biology", "Diversity (politics)", "Plant Science", "Biodiversity conservation", "Fungal Diversity", "Agricultural and Biological Sciences", "Soil", "Life", "Sociology", "WATER", "Global biodiversity distribution", "Fungal diversity", "Phylogeny", "Soil Microbiology", "2. Zero hunger", "Multidisciplinary", "Earth", " Environmental", " Ecological", " and Space Sciences", "Geography", "Ecology", "soil fungal diversity", "4. Education", "SPECIES RICHNESS", "Life Sciences", "https://www.science.org/doi/suppl/10.1126/sciadv.adj8016/suppl_file/sciadv.adj8016_sm.pdf", "Biodiversity", "FOS: Sociology", "global biodiversity distribution", "sienet", "https://www.science.org/doi/suppl/10.1126/sciadv.adj8016/suppl_file/sciadv.adj8016_tables_s1_to_s13.zip", "Diversity and Evolution of Fungal Pathogens", "570", "Supplementary Information", "DNA markers", "QH301", "Sequencing high-resolution DNA", "Biochemistry", " Genetics and Molecular Biology", "monimuotoisuus", "Mycorrhizal Fungi and Plant Interactions", "Life Science", "Humans", "14. Life underwater", "General", "Global ecological processes", "Biology", "Ecosystem", "Ecology", " Evolution", " Behavior and Systematics", "global ecological processes", "Soil fungal diversity", "microbiology", "Fungi", "Water", "Cell Biology", "15. Life on land", "luonnon monimuotoisuus", "Agronomy", "biodiversiteetti", "LIFE", "ekosysteemit (ekologia)", "Evolution and Ecology of Endophyte-Grass Symbiosis", "13. Climate action", "Ecology", " evolutionary biology", "Earth and Environmental Sciences", "FOS: Biological sciences", "Anthropology", "ta1181", "biodiversity conservation", "Species richness"]}, "links": [{"href": "https://www.science.org/doi/epdf/10.1126/sciadv.adj8016"}, {"href": "https://www.science.org/doi/pdf/10.1126/sciadv.adj8016"}, {"href": "https://doi.org/10.1126/sciadv.adj8016"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20Advances", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1126/sciadv.adj8016", "name": "item", "description": "10.1126/sciadv.adj8016", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1126/sciadv.adj8016"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-12-01T00:00:00Z"}}, {"id": "10.1139/x75-087", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-08-25T16:18:05Z", "type": "Journal Article", "created": "2008-05-01", "title": "Wildfire Effects On Nutrient Distribution And Leaching In A Coniferous Ecosystem", "description": "<p> Distribution of nutrients after the Entiat fire in north central Washington was examined. This intense fire produced an average ash weight on the soil surface of 2900\uffe2\uff80\uff82kg/ha. The ash layer contained 23\uffe2\uff80\uff82kg/ha N, 314\uffe2\uff80\uff82kg/ha Ca, 54\uffe2\uff80\uff82kg/ha Mg, 70\uffe2\uff80\uff82kg/ha K, and 22\uffe2\uff80\uff82kg/ha Na. Nutrient losses during the fire as a result of combined volatilization and ash convection were 855\uffe2\uff80\uff82kg/ha N, 75\uffe2\uff80\uff82kg/ha Ca, 33\uffe2\uff80\uff82kg/ha Mg, 282\uffe2\uff80\uff82kg/ha K, and 698\uffe2\uff80\uff82kg/ha Na. Nitrogen loss apparently was proportional to fuel dry weight loss.Leaching of the ash layer in the 1st year after burning transferred a trace of N, 149\uffe2\uff80\uff82kg/ha Ca, 50\uffe2\uff80\uff82kg/ha Mg, 92\uffe2\uff80\uff82kg/ha K, and 33\uffe2\uff80\uff82kg/ha Na from the ash layer to the soil. Of the amounts leached from the ash, 134\uffe2\uff80\uff82kg/ha Ca, 48\uffe2\uff80\uff82kg/ha Mg, and 84\uffe2\uff80\uff82kg/ha K were retained in the 0-to 19-cm layer of soil. In the same interval a net loss of 29\uffe2\uff80\uff82kg/ha Na was observed from the 0-to 19-cm layer of soil.Cation leaching from ash layers was primarily related to water percolation through the ash. Equations are given that describe leaching of Ca, Mg, K, and Na from an average ash layer of the Entiat fire. </p>", "keywords": ["0106 biological sciences", "13. Climate action", "Ecology and Evolutionary Biology", "Plant Sciences", "0401 agriculture", " forestry", " and fisheries", "Agriculture", "Genetics and Genomics", "04 agricultural and veterinary sciences", "15. Life on land", "Forest Sciences", "01 natural sciences"], "contacts": [{"organization": "Grier, Charles C.", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1139/x75-087"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Canadian%20Journal%20of%20Forest%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1139/x75-087", "name": "item", "description": "10.1139/x75-087", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1139/x75-087"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1975-12-01T00:00:00Z"}}, {"id": "10.1139/x82-111", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-08-25T16:18:05Z", "type": "Journal Article", "created": "2008-05-01", "title": "Effects Of Thinning On Biomass Growth In Young Populus-Tremuloides Plots", "description": "<p> Stem, branch, and leaf biomass and leaf-area index (LAI) were estimated for 4 years of growth in plots of thinned and unthinned 7-year-old Populustremuloides Michx. In 1978, transmitted photosynthetically active radiation (PAR) was monitored to estimate percent PAR transmitted. Four years after thinning total aboveground biomass and LAI in the thinned plots exceeded prethinning levels, but were still much less than in the unthinned plots. Leaf biomass and LAI in the unthinned plots increased to 3900\uffe2\uff80\uff82kg ha\uffe2\uff88\uff921 and 5.7, respectively, but were still increasing in the thinned plots. Annual net stem and branch production during the study was relatively constant at about 5300\uffe2\uff80\uff82kg ha\uffe2\uff88\uff921 year\uffe2\uff88\uff921 in the unthinned plots, while net production in the thinned plots was still increasing. Transmitted PAR attenuated rapidly to LAI 3.5, approaching asymptote near LAI 5. Results suggest that, in the short term, thinning of young stands will decrease total aboveground biomass, but net annual biomass accumulation may not be greatly different between thinned and unthinned stands. LAI 3.5 may be an acceptable value for 11-year-old stands but should be permitted to increase to near LAI 5 in older stands. </p>", "keywords": ["0106 biological sciences", "Ecology and Evolutionary Biology", "Plant Sciences", "0401 agriculture", " forestry", " and fisheries", "Agriculture", "Genetics and Genomics", "04 agricultural and veterinary sciences", "15. Life on land", "Forest Sciences", "01 natural sciences"], "contacts": [{"organization": "Hocker, H. W., Jr.", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1139/x82-111"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Canadian%20Journal%20of%20Forest%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1139/x82-111", "name": "item", "description": "10.1139/x82-111", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1139/x82-111"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1982-12-01T00:00:00Z"}}, {"id": "10261/276560", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:22:00Z", "type": "Journal Article", "created": "2020-04-24", "title": "Alternation of wet and dry sides during partial rootzone drying irrigation enhances leaf ethylene evolution", "description": "Soil drying increases endogenous ABA and ACC concentrations in planta, but how these compounds interact to regulate stomatal responses to soil drying and re-watering is still unclear. To determine the temporal dynamics and physiological significance of root, xylem and leaf ABA and ACC concentrations in response to deficit irrigation (DI) or partial rootzone drying (PRD-F) and re-watering, these variables were measured in plants exposed to similar whole pot soil water contents. Both DI and PRD-F plants received only a fraction of the irrigation supplied to well-watered (WW) plants, either to all (DI) or part (PRD-F) of the rootzone of plants grown in split-pots. Both DI and PRD-F induced partial stomatal closure, increased root ABA and ACC accumulation consistent with local soil water content, but did not affect xylem or leaf concentrations of these compounds compared to WW plants. Two hours after re-watering all (DI-RW) or part of the rootzone (PRD-A) to the same soil water content, stomatal conductance returned to WW values or further decreased respectively. Re-watering the whole rootzone had no effect on xylem and leaf ABA and ACC concentrations, while re-watering the dry side of the pot in PRD plants had no effect on xylem and leaf ABA concentrations but increased xylem and leaf ACC concentrations and leaf ethylene evolution. Leaf water potential was similar between all irrigation treatments, with stomatal conductance declining as xylem ABA concentrations and leaf ACC concentrations increased. Prior to re-watering PRD plants, accounting for the spatial differences in soil water uptake best explained variation in xylem ACC concentration suggesting root-to-shoot ACC signalling, but this model did not account for variation in xylem ACC concentration after re-watering the dry side of PRD plants. Thus local (foliar) and long-distance (root-to-shoot) variation in ACC status both seem important in regulating the temporal dynamics of foliar ethylene evolution in plants exposed to PRD.", "keywords": ["0106 biological sciences", "Irrigation", "Stomatal conductance", "Root-to-shoot signalling", "Ethylene", "Physiological significance", "Deficit irrigation", "Plant Science", "Leaf water", "F06 Irrigation", "01 natural sciences", "ACC", "Ecology", " Evolution", " Behavior and Systematics", "580", "2. Zero hunger", "Xylem", "15. Life on land", "F60 Plant physiology and biochemistry", "6. Clean water", "Horticulture", "13. Climate action", "Soil water", "Agronomy and Crop Science", "Soil moisture heterogeneity", "Partial rootzone drying"]}, "links": [{"href": "https://eprints.lancs.ac.uk/id/eprint/144510/1/Juan_EEB_Manuscript_final.pdf"}, {"href": "https://doi.org/10261/276560"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20and%20Experimental%20Botany", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10261/276560", "name": "item", "description": "10261/276560", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10261/276560"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-08-01T00:00:00Z"}}, {"id": "10.1371/journal.pone.0034887", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:18:14Z", "type": "Journal Article", "created": "2012-04-19", "title": "Changes In The Diversity Of Soil Arbuscular Mycorrhizal Fungi After Cultivation For Biofuel Production In A Guantanamo (Cuba) Tropical System", "description": "Open AccessLes champignons mycorhiziens arbusculaires (FMA) sont un \u00e9l\u00e9ment cl\u00e9 et int\u00e9gral de la stabilit\u00e9, de la durabilit\u00e9 et du fonctionnement des \u00e9cosyst\u00e8mes. Dans cette \u00e9tude, nous avons caract\u00e9ris\u00e9 la biodiversit\u00e9 de l'AMF dans un sol v\u00e9g\u00e9tal natif et dans un sol cultiv\u00e9 avec Jatropha curcas ou Ricinus communis, dans un syst\u00e8me tropical \u00e0 Guantanamo (Cuba), afin de v\u00e9rifier si un changement d'utilisation des terres pour la production de plantes biocarburants a eu un effet sur les communaut\u00e9s de l'AMF. Nous \u00e9valuons \u00e9galement si certaines propri\u00e9t\u00e9s du sol li\u00e9es \u00e0 la fertilit\u00e9 du sol (N total, C organique, biomasse microbienne C, pourcentage de stabilit\u00e9 globale, pH et conductivit\u00e9 \u00e9lectrique) ont \u00e9t\u00e9 modifi\u00e9es avec la culture des deux esp\u00e8ces de cultures. Les g\u00e8nes d'ARNr de la petite sous-unit\u00e9 fongique AM (SSU) ont \u00e9t\u00e9 soumis \u00e0 une PCR, \u00e0 un clonage, \u00e0 un s\u00e9quen\u00e7age et \u00e0 des analyses phylog\u00e9n\u00e9tiques. Vingt types de s\u00e9quences fongiques AM ont \u00e9t\u00e9 identifi\u00e9s\u00a0: 19 appartiennent aux Glomeraceae et un aux Paraglomeraceae. Deux types de s\u00e9quences d'AMF li\u00e9s \u00e0 des esp\u00e8ces d'AMF cultiv\u00e9es (Glo G3 pour Glomus sinuosum et Glo G6 pour Glomus intraradices-G. fasciculatum-G. irregulare) ne se sont pas produits dans le sol cultiv\u00e9 avec J. curcas et R. communis. Les propri\u00e9t\u00e9s du sol (N total, C organique et biomasse microbienne C) \u00e9taient plus \u00e9lev\u00e9es dans le sol cultiv\u00e9 avec les deux esp\u00e8ces v\u00e9g\u00e9tales. La diversit\u00e9 de la communaut\u00e9 AMF a diminu\u00e9 dans le sol des deux cultures, par rapport au sol v\u00e9g\u00e9tal indig\u00e8ne, et variait consid\u00e9rablement en fonction des esp\u00e8ces cultiv\u00e9es plant\u00e9es. Ainsi, le sol de R. communis pr\u00e9sentait une diversit\u00e9 AMF plus \u00e9lev\u00e9e que le sol de J. curcas. En conclusion, R. communis pourrait \u00eatre plus adapt\u00e9 \u00e0 la conservation \u00e0 long terme et \u00e0 la gestion durable de ces \u00e9cosyst\u00e8mes tropicaux.", "keywords": ["Biomass (ecology)", "Jatropha", "Plant Science", "Plant Roots", "7. Clean energy", "Fungal Diversity", "Agricultural and Biological Sciences", "Soil", "Mycorrhizae", "Jatropha curcas", "Soil water", "Saproxylic Insect Ecology and Forest Management", "Mycological Typing Techniques", "Phylogeny", "Soil Microbiology", "2. Zero hunger", "Ecology", "Q", "R", "Cuba", "Life Sciences", "Agriculture", "Biodiversity", "04 agricultural and veterinary sciences", "Hydrogen-Ion Concentration", "Medicine", "Research Article", "Science", "Soil fertility", "12. Responsible consumption", "Mycorrhizal Fungi and Plant Interactions", "Health Sciences", "Biology", "Ecosystem", "Ribosome Subunits", " Small", " Eukaryotic", "Pharmacology", "Tropical Climate", "Soil organic matter", "Electric Conductivity", "Botany", "Medicinal Mushrooms: Antitumor and Immunomodulating Properties", "Spore", "15. Life on land", "Agronomy", "Glomus", "Molecular Typing", "Biofuels", "Insect Science", "FOS: Biological sciences", "0401 agriculture", " forestry", " and fisheries", "Ricinus communis"]}, "links": [{"href": "https://doi.org/10.1371/journal.pone.0034887"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PLoS%20ONE", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1371/journal.pone.0034887", "name": "item", "description": "10.1371/journal.pone.0034887", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1371/journal.pone.0034887"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-04-19T00:00:00Z"}}, {"id": "10.1371/journal.pone.0168134", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:18:16Z", "type": "Journal Article", "created": "2016-12-13", "title": "Chinese Milk Vetch As Green Manure Mitigates Nitrous Oxide Emission From Monocropped Rice System In South China", "description": "Open AccessMonocropped rice system is an important intensive cropping system for food security in China. Green manure (GM) as an alternative to fertilizer N (FN) is useful for improving soil quality. However, few studies have examined the effect of Chinese milk vetch (CMV) as GM on nitrous oxide (N2O) emission from monocropped rice field in south China. Therefore, a pot-culture experiment with four treatments (control, no FN and CMV; CMV as GM alone, M; fertilizer N alone, FN; integrating fertilizer N with CMV, NM) was performed to investigate the effect of incorporating CMV as GM on N2O emission using a closed chamber-gas chromatography (GC) technique during the rice growing periods. Under the same N rate, incorporating CMV as GM (the treatments of M and NM) mitigated N2O emission during the growing periods of rice plant, reduced the NO3- content and activities of nitrate and nitrite reductase as well as the population of nitrifying bacteria in top soil at maturity stage of rice plant versus FN pots. The global warming potential (GWP) and greenhouse gas intensity (GHGI) of N2O from monocropped rice field was ranked as M<NM<FN. However, the treatment of NM increased rice grain yield and soil NH4+ content, which were dramatically decreased in the M pots, over the treatment of FN. Hence, it can be concluded that integrating FN with CMV as GM is a feasible tactic for food security and N2O mitigation in the monocropped rice based system.", "keywords": ["Greenhouse Effect", "China", "Science", "Population", "Nitrous Oxide", "Soil Science", "Nitrogen Use Efficiency", "Rice Water Management and Productivity Enhancement", "Plant Science", "Crop", "Nitrate", "Greenhouse gas", "Environmental science", "Agricultural and Biological Sciences", "Soil", "Fertilizer", "Sociology", "Paddy field", "Biology", "Demography", "2. Zero hunger", "Nitrous oxide", "Ecology", "Q", "R", "Life Sciences", "Fabaceae", "Oryza", "Agriculture", "Food security", "04 agricultural and veterinary sciences", "Nitrogen Cycle", "Soil Nutrient Management", "15. Life on land", "Crop Production", "Agronomy", "6. Clean water", "Field experiment", "FOS: Sociology", "13. Climate action", "FOS: Biological sciences", "Medicine", "0401 agriculture", " forestry", " and fisheries", "Intercropping in Agricultural Systems", "Soil Carbon Dynamics and Nutrient Cycling in Ecosystems", "Agronomy and Crop Science", "Research Article", "Cropping system", "Nitrate reductase"]}, "links": [{"href": "https://doi.org/10.1371/journal.pone.0168134"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PLOS%20ONE", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1371/journal.pone.0168134", "name": "item", "description": "10.1371/journal.pone.0168134", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1371/journal.pone.0168134"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-12-13T00:00:00Z"}}, {"id": "10.15488/17031", "type": "Feature", "geometry": null, "properties": {"updated": "2026-08-25T16:18:24Z", "type": "Journal Article", "created": "2016-04-08", "title": "Challenges in imaging and predictive modeling of rhizosphere processes", "description": "Background: Plant-soil interaction is central to human food production and ecosystem function. Thus, it is essential to not only understand, but also to develop predictive mathematical models which can be used to assess how climate and soil management practices will affect these interactions. Scope: In this paper we review the current developments in structural and chemical imaging of rhizosphere processes within the context of multiscale mathematical image based modeling. We outline areas that need more research and areas which would benefit from more detailed understanding. Conclusions: We conclude that the combination of structural and chemical imaging with modeling is an incredibly powerful tool which is fundamental for understanding how plant roots interact with soil. We emphasize the need for more researchers to be attracted to this area that is so fertile for future discoveries. Finally, model building must go hand in hand with experiments. In particular, there is a real need to integrate rhizosphere structural and chemical imaging with modeling for better understanding of the rhizosphere processes leading to models which explicitly account for pore scale processes.", "keywords": ["2. Zero hunger", "X-ray CT", "Dewey Decimal Classification::500 | Naturwissenschaften::570 | Biowissenschaften", " Biologie", "Soil Science", "Plant Science", "Chemical mapping", "04 agricultural and veterinary sciences", "15. Life on land", "Dewey Decimal Classification::500 | Naturwissenschaften::580 | Pflanzen (Botanik)", "13. Climate action", "Rhizosphere", "0401 agriculture", " forestry", " and fisheries", "Mathematical modeling", "Correlative imaging"]}, "links": [{"href": "https://eprints.soton.ac.uk/390303/1/Roose%2520et%2520al%25202016%2520Plant%2520Soil%2520Marschner%2520Review%2520Accepted.pdf"}, {"href": "https://doi.org/10.15488/17031"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.15488/17031", "name": "item", "description": "10.15488/17031", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.15488/17031"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-04-08T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Plant+Science&offset=50&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Plant+Science&offset=50&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "prev", "title": "items (prev)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Plant+Science&offset=0", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Plant+Science&offset=100", "hreflang": "en-US"}], "numberMatched": 253, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-08-25T21:47:22.233566Z"}