{"type": "FeatureCollection", "features": [{"id": "10.1007/s00442-002-1005-6", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:22Z", "type": "Journal Article", "created": "2003-02-13", "title": "Effects Of Elevated Co2 On Foliar Chemistry Of Saplings Of Nine Species Of Tropical Tree", "description": "This study examined the effects of elevated CO2 on secondary metabolites for saplings of tropical trees. In the first experiment, nine species of trees were grown in the ground in open-top chambers in central Panama at ambient and elevated CO2 (about twice ambient). On average, leaf phenolic contents were 48% higher under elevated CO2. Biomass accumulation was not affected by CO2, but starch, total non-structural carbohydrates and C/N ratios all increased. In a second experiment with Ficus, an early successional species, and Virola, a late successional species, treatments were enriched for both CO2 and nutrients. For both species, nutrient fertilization increased plant growth and decreased leaf carbohydrates, C/N ratios and phenolic contents, as predicted by the carbon/nutrient balance hypothesis. Changes in leaf C/N levels were correlated with changes in phenolic contents for Virola (r=0.95, P<0.05), but not for Ficus. Thus, elevated CO2, particularly under conditions of low soil fertility, significantly increased phenolic content as well as the C/N ratio of leaves. The magnitude of the changes is sufficient to negatively affect herbivore growth, survival and fecundity, which should have impacts on plant/herbivore interactions.", "keywords": ["0106 biological sciences", "2. Zero hunger", "elevated CO2", "Ecology", "Panama", "No3 Availability", "Performance", "Insect Herbivore Interactions", "Secondary Metabolism", "phenolic compounds", "15. Life on land", "01 natural sciences", "fertilization", "Atmospheric Co2", "Leaf Quality", "Responses", "tropical trees", "Deciduous Trees", "Phenolic-compounds", "Carbon-nutrient Balance"]}, "links": [{"href": "https://doi.org/10.1007/s00442-002-1005-6"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Oecologia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00442-002-1005-6", "name": "item", "description": "10.1007/s00442-002-1005-6", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00442-002-1005-6"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2002-09-01T00:00:00Z"}}, {"id": "10.1007/s10533-015-0157-5", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:36Z", "type": "Journal Article", "created": "2015-11-14", "title": "Chronic Nitrogen Fertilization And Carbon Sequestration In Grassland Soils: Evidence Of A Microbial Enzyme Link", "description": "Chronic nitrogen (N) fertilization can greatly affect soil carbon (C) sequestration by altering biochemical interactions between plant detritus and soil microbes. In lignin-rich forest soils, chronic N additions tend to increase soil C content partly by decreasing the activity of lignin-degrading enzymes. In cellulose-rich grassland soils it is not clear whether cellulose-degrading enzymes are also inhibited by N additions and what consequences this might have on changes in soil C content. Here we address whether chronic N fertilization has affected (1) the C content of light versus heavier soil fractions, and (2) the activity of four extracellular enzymes including the C-acquiring enzyme \u03b2-1,4-glucosidase (BG; necessary for cellulose hydrolysis). We found that 19\u00a0years of chronic N-only addition to permanent grassland have significantly increased soil C sequestration in heavy but not in light soil density fractions, and this C accrual was associated with a significant increase (and not decrease) of BG activity. Chronic N fertilization may increase BG activity because greater N availability reduces root C:N ratios thus increasing microbial demand for C, which is met by C inputs from enhanced root C pools in N-only fertilized soils. However, BG activity and total root mass strongly decreased in high pH soils under the application of lime (i.e. CaCO3), which reduced the ability of these organo-mineral soils to gain more C per units of N added. Our study is the first to show a potential \u2018enzyme link\u2019 between (1) long-term additions of inorganic N to grassland soils, and (2) the greater C content of organo-mineral soil fractions. Our new hypothesis is that the \u2018enzyme link\u2019 occurs because (a) BG activity is stimulated by increased microbial C demand relative to N under chronic fertilization, and (b) increased BG activity causes more C from roots and from microbial metabolites to accumulate and stabilize into organo-mineral C fractions. We suggest that any combination of management practices that can influence the BG \u2018enzyme link\u2019 will have far reaching implications for long-term C sequestration in grassland soils.", "keywords": ["DECOMPOSITION", "DYNAMICS", "570", "\u03b2-1", "4-Glucosidase", "/dk/atira/pure/subjectarea/asjc/2300/2304", "NUTRIENT RELEASE", "Environmental Sciences & Ecology", "Root C:N ratio", "Extracellular enzyme activity", "LITTER DECAY", "FOREST ECOSYSTEMS", "0399 Other Chemical Sciences", "0402 Geochemistry", "Environmental Chemistry", "Geosciences", " Multidisciplinary", "beta-1", "4-Glucosidase", "Earth-Surface Processes", "Water Science and Technology", "2. Zero hunger", "Multidisciplinary", "Science & Technology", "/dk/atira/pure/subjectarea/asjc/1900/1904", "Geology", "sequestration", "Agronomy & Agriculture", "04 agricultural and veterinary sciences", "15. Life on land", "Soil carbon", "N DEPOSITION", "ORGANIC-MATTER", "PHOSPHORUS", "Fertilization", "Physical Sciences", "N ratio [Root C]", "0401 agriculture", " forestry", " and fisheries", "Soil carbon sequestration", "Liming", "TURNOVER", "Life Sciences & Biomedicine", "Geosciences", "/dk/atira/pure/subjectarea/asjc/2300/2312", "Environmental Sciences", "RESPONSES"]}, "links": [{"href": "https://doi.org/10.1007/s10533-015-0157-5"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biogeochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10533-015-0157-5", "name": "item", "description": "10.1007/s10533-015-0157-5", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10533-015-0157-5"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-11-14T00:00:00Z"}}, {"id": "10.1016/j.apsoil.2016.08.004", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:30Z", "type": "Journal Article", "created": "2016-08-19", "title": "Functional Response Of Soil Microbial Communities To Tillage, Cover Crops And Nitrogen Fertilization", "description": "\u00a9 2016 Elsevier B.V.Agricultural practices such as tillage, cover crops, and nitrogen (N) fertilization affect physico-chemical and biological soil parameters. However, these factors were often studied separately and their combined effects remain unclear, especially with respect to soil microbial functional diversity and carbon (C) and N content. Thereafter, we aim to assess the links between cropping systems and functional response of microbial communities by using a large range of soil chemical and biological measurements. A 5-yr field experiment was conducted in Northern France using a combination of three factors: i) no-till (NT) vs. conventional tillage (CT); ii) with or without winter cover crops (bare fallow; cover crops with a low prevalence of legumes; cover crop with a high prevalence of legumes); and iii) with or without N fertilization. C and N inputs from cover crops and crop residues, C and N content, enzyme activities, and microbial functional diversity in the topsoil (0\u201310 cm) were measured over an industrial crop rotation: wheat, pea, corn, wheat, flax. No-till combined with any of the cover crops was characterized by increased total soil organic C and N contents by more than 20% between 2010 and 2015. Dehydrogenase and urease activities were significantly greatest under NT, irrespective of the presence of cover crops. Cover crops without N fertilization under no-till led to higher microbial functional activity (faster carbohydrate and phenolic compound degradation) and diversity. Bare fallow had lower soil microbial functional diversity and C and N contents compared with soil under NT and cover crops. On the other hand, NT associated with cover crops allowed to maintain the soil in both C and N, and to promote microbial activities without N fertilization. In conclusion, winter cover crops and/or NT are sustainable agricultural practices resulting in a greater soil quality index. These results demonstrate that NT and use of standard cover crops or cover crops with legumes for 5 years under a low biomass return in industrial crop production have a positive effect on: i) upper soil C content and microbial enzymes, irrespective of N fertilization regime; ii) soil microbial functional diversity in the absence of N fertilization.", "keywords": ["2. Zero hunger", "Soil management", "13. Climate action", "Carbon content", "Microbial functional responses", "15. Life on land", "630"]}, "links": [{"href": "https://doi.org/10.1016/j.apsoil.2016.08.004"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Soil%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.apsoil.2016.08.004", "name": "item", "description": "10.1016/j.apsoil.2016.08.004", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.apsoil.2016.08.004"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-12-01T00:00:00Z"}}, {"id": "10.1016/j.eja.2017.02.006", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:50Z", "type": "Journal Article", "created": "2017-03-06", "title": "Long-Term P And K Fertilisation Strategies And Balances Affect Soil Availability Indices, Crop Yield Depression Risk And N Use", "description": "The last century has seen a large increase of fertiliser use, along with a subsequent rise of crop productivity. However, in many places its intensive use has become a burden to the environment, and legislation has been introduced to restrict nutrient applications. In combination with changing production scenarios as a result of climate change, this means an improved understanding is needed of how low nutrient availability and climatic stress factors affect yields and yield stability.We examined the long-term effects mineral and organic fertilisation on a nutrient-depleted field, and observed large annual variations: depending on the year, average spring barley yields under unfertilised management (U) were between 17-75% lower than the reference N1/2P1/2K1/2 (60-10-60 kg ha(-1)). Yields increased up to 174% under N1P1K1 (120-20-120 kg ha(-1)), while animal manure applications at an N availability level corresponding to N-1 were between 79 and 137%. No temporal yield trends could be observed, but long-term changes of Olsen-P and exchangeable K were related to the nutrient balances (inputs-offtake) (r(2) = 0.60 and 0.59, respectively, P < 0.001).Multiple linear regression analysis was used to examine the effects of the treatments in combination with annual weather variations. The results could be split into two outcomes, 1) a general relation between yields and temperatures for the periods of early spring (P < 0.01, multiple R-2 = 0.31) and summer (P < 0.001, multiple R-2 =0.45), and 2) an interaction between temperature and nutrient applications during crop establishment, leading to a diverse response of relative yields (P < 0.001 multiple R-2 =0.64), i.e. relative yield losses under the unfertilised treatment (U) were greater in years with lower spring temperatures, and, conversely, the increased nutrient availability in the fully mineral and organically fertilised treatments could partially alleviate the negative effects.After 13 years of repeated fertilisation, inputs were suspended for a single year and only N was applied to evaluate the residual effects. Yields were significantly affected by the different fertilisation histories (P < 0.001). Likewise, apparent nitrogen recovery tended to improve with previous inputs, but the observations were highly variable.Overall, the analyses agree with the notion that brief periods of stress at a critical stage may significantly affect yields, and confirmed that management of sufficient nutrient availability is critical for maintaining high and stable yields. (C) 2017 Elsevier B.V. All rights reserved.", "keywords": ["0106 biological sciences", "2. Zero hunger", "Manure Application", "Yield stability", "550", "Temperature", "Nitrogen Use Efficiency", "Phosphorus", "Partial nutrient balance", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "Mediterranean Conditions", "6. Clean water", "Loamy Sand", "Field Experiments", "13. Climate action", "Potassium", "Nutrient use efficiency", "Responses", "Nutrient deficiency", "0401 agriculture", " forestry", " and fisheries", "Winter-Wheat"]}, "links": [{"href": "https://doi.org/10.1016/j.eja.2017.02.006"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/European%20Journal%20of%20Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.eja.2017.02.006", "name": "item", "description": "10.1016/j.eja.2017.02.006", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.eja.2017.02.006"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-05-01T00:00:00Z"}}, {"id": "10.1016/j.ecoleng.2017.08.010", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:45Z", "type": "Journal Article", "created": "2017-11-27", "title": "Sensitivity of the landslide model LAPSUS_LS to vegetation and soil parameters", "description": "Open Access\u0625\u0646 \u062a\u0623\u062b\u064a\u0631 \u0627\u0644\u063a\u0637\u0627\u0621 \u0627\u0644\u0646\u0628\u0627\u062a\u064a \u0639\u0644\u0649 \u0627\u0633\u062a\u0642\u0631\u0627\u0631 \u0627\u0644\u0645\u0646\u062d\u062f\u0631\u0627\u062a \u0645\u0641\u0647\u0648\u0645 \u062c\u064a\u062f\u064b\u0627 \u0639\u0644\u0649 \u0645\u0633\u062a\u0648\u0649 \u0627\u0644\u0645\u0646\u062d\u062f\u0631\u0627\u062a\u060c \u0644\u0643\u0646 \u0627\u0644\u0627\u0631\u062a\u0642\u0627\u0621 \u0625\u0644\u0649 \u0645\u0633\u062a\u0648\u0649 \u0645\u0633\u062a\u062c\u0645\u0639\u0627\u062a \u0627\u0644\u0645\u064a\u0627\u0647 \u0644\u0627 \u064a\u0632\u0627\u0644 \u064a\u0645\u062b\u0644 \u062a\u062d\u062f\u064a\u064b\u0627\u060c 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\u0648\u0627\u0644\u0623\u0634\u062c\u0627\u0631 \u0639\u0644\u0649 \u0627\u0644\u0645\u0646\u062d\u062f\u0631\u0627\u062a\u060c \u0644\u0643\u0646 \u0627\u0644\u0632\u0631\u0627\u0639\u0629 \u0627\u0644\u0623\u062d\u0627\u062f\u064a\u0629 \u0644\u0644\u0628\u0646 \u0643\u0627\u0646\u062a \u063a\u064a\u0631 \u0645\u0633\u062a\u0642\u0631\u0629 \u0644\u0644\u063a\u0627\u064a\u0629\u060c \u0644\u0623\u0646 \u062a\u0642\u0648\u064a\u0629 \u0627\u0644\u062c\u0630\u0631 \u0643\u0627\u0646\u062a \u0645\u0646\u062e\u0641\u0636\u0629 \u0639\u0644\u0649 \u0639\u0645\u0642 1.5 \u0645\u062a\u0631. \u0643\u0627\u0646 \u0644\u0646\u0642\u0644 \u0627\u0644\u062a\u0631\u0628\u0629 \u062a\u0623\u062b\u064a\u0631 \u0645\u062d\u062f\u0648\u062f \u0639\u0644\u0649 \u0627\u0644\u0646\u062a\u0627\u0626\u062c \u0645\u0642\u0627\u0631\u0646\u0629 \u0628\u0627\u0644\u0643\u062b\u0627\u0641\u0629 \u0627\u0644\u0633\u0627\u0626\u0628\u0629 \u0648\u0632\u0627\u0648\u064a\u0629 \u0627\u0644\u0627\u062d\u062a\u0643\u0627\u0643 \u0627\u0644\u062f\u0627\u062e\u0644\u064a. \u0644\u0645 \u064a\u0643\u0646 \u0644\u0644\u0631\u0633\u0648\u0645 \u0627\u0644\u0625\u0636\u0627\u0641\u064a\u0629 \u0644\u0644\u0643\u062a\u0644\u0629 \u0627\u0644\u062d\u064a\u0648\u064a\u0629 \u0623\u064a \u062a\u0623\u062b\u064a\u0631 \u0643\u0628\u064a\u0631 \u0639\u0644\u0649 \u0639\u0645\u0644\u064a\u0627\u062a \u0627\u0644\u0645\u062d\u0627\u0643\u0627\u0629. \u0641\u064a \u0627\u0644\u062e\u062a\u0627\u0645\u060c \u0627\u0633\u062a\u062c\u0627\u0628\u062a LAPSUS_LS \u0628\u0634\u0643\u0644 \u062c\u064a\u062f \u0644\u0628\u064a\u0627\u0646\u0627\u062a \u0645\u062f\u062e\u0644\u0627\u062a \u0627\u0644\u062a\u0631\u0628\u0629 \u0648\u0627\u0644\u063a\u0637\u0627\u0621 \u0627\u0644\u0646\u0628\u0627\u062a\u064a\u060c \u0648\u0647\u064a \u0645\u0631\u0634\u062d \u0645\u0646\u0627\u0633\u0628 \u0644\u0646\u0645\u0630\u062c\u0629 \u0627\u0633\u062a\u0642\u0631\u0627\u0631 \u0627\u0644\u0645\u0646\u062d\u062f\u0631\u0627\u062a \u0627\u0644\u0646\u0628\u0627\u062a\u064a\u0629 \u0639\u0644\u0649 \u0645\u0633\u062a\u0648\u0649 \u0645\u0633\u062a\u062c\u0645\u0639\u0627\u062a \u0627\u0644\u0645\u064a\u0627\u0647.", "keywords": ["Cohesion (chemistry)", "http://aims.fao.org/aos/agrovoc/c_27199", "http://aims.fao.org/aos/agrovoc/c_4915", "F08 - Syst\u00e8mes et modes de culture", "[SDV]Life Sciences [q-bio]", "culture associ\u00e9e", "http://aims.fao.org/aos/agrovoc/c_1920", "FOS: Mechanical engineering", "Organic chemistry", "Plant Science", "02 engineering and technology", "Erythrina poeppigiana", "01 natural sciences", "630", "Mechanical Effects of Plant Roots on Slope Stability", "stabilisation du sol", "Agricultural and Biological Sciences", "Soil", "monoculture", "Engineering", "enracinement", "couverture du sol", "m\u00e9thode statistique", "Pathology", "Monoculture", "http://aims.fao.org/aos/agrovoc/c_1721", "http://aims.fao.org/aos/agrovoc/c_2018", "http://aims.fao.org/aos/agrovoc/c_24199", "http://aims.fao.org/aos/agrovoc/c_35927", "U10 - Informatique", " math\u00e9matiques et statistiques", "Susceptibility Mapping", "Life Sciences", "Hydrology (agriculture)", "Geology", "Coffea arabica", "[SDV] Life Sciences [q-bio]", "Chemistry", "Landslide", "Plant Responses to Flooding Stress", "Slope Stability", "Physical Sciences", "http://aims.fao.org/aos/agrovoc/c_6649", "Medicine", "Vegetation (pathology)", "http://aims.fao.org/aos/agrovoc/c_7377", "http://aims.fao.org/aos/agrovoc/c_7171", "0207 environmental engineering", "Soil Science", "Management", " Monitoring", " Policy and Law", "Transmissivity", "Environmental science", "mod\u00e8le math\u00e9matique", "FOS: Mathematics", "http://aims.fao.org/aos/agrovoc/c_12676", "http://aims.fao.org/aos/agrovoc/c_37897", "Landslide Hazards and Risk Assessment", "pratique culturale", "Biology", "0105 earth and related environmental sciences", "P36 - \u00c9rosion", " conservation et r\u00e9cup\u00e9ration des sols", "Soil science", "montagne", "Mechanical Engineering", "Slope stability", "Modeling", "Botany", "FOS: Earth and related environmental sciences", "15. Life on land", "Roots", "Bulk density", "Agronomy", "Geotechnical engineering", "13. Climate action", "Environmental Science", "Cohesion", "Mathematics"]}, "links": [{"href": "https://doi.org/10.1016/j.ecoleng.2017.08.010"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Engineering", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ecoleng.2017.08.010", "name": "item", "description": "10.1016/j.ecoleng.2017.08.010", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ecoleng.2017.08.010"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-12-01T00:00:00Z"}}, {"id": "10.1016/j.pbi.2021.102120", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:34Z", "type": "Journal Article", "created": "2021-11-30", "title": "Fighting salt or enemies: shared perception and signaling strategies", "description": "Plants react to a myriad of biotic and abiotic environmental signals through specific cellular mechanisms required for survival under stress. Although pathogen perception has been widely studied and characterized, salt stress perception and signaling remain largely elusive. Recent observations, obtained in the model plant Arabidopsis thaliana, show that perception of specific features of pathogens also allows plants to mount salt stress resilience pathways, highlighting the possibility that salt sensing and pathogen perception mechanisms partially overlap. We discuss these overlapping strategies and examine the emerging role of A.\u00a0thaliana cell wall and plasma membrane components in activating both salt- and pathogen-induced responses, as part of exquisite mechanisms underlying perception of damage and danger. This knowledge helps understanding the complexity of plant responses to pathogens and salinity, leading to new hypotheses that could explain why plants evolved similar strategies to respond to these, at first sight, very different types of stimuli.", "keywords": ["0301 basic medicine", "Salinity", "0303 health sciences", "Pathogen elicitors", "Arabidopsis Proteins", "Arabidopsis", "Plants", "15. Life on land", "Salt Stress", "03 medical and health sciences", "Cell wall sensing", "Plant immune responses", "Damage-associated molecular patterns (DAMPs)", "Gene Expression Regulation", " Plant", "Stress", " Physiological", "Perception", "Danger signals"]}, "links": [{"href": "https://doi.org/10.1016/j.pbi.2021.102120"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Current%20Opinion%20in%20Plant%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.pbi.2021.102120", "name": "item", "description": "10.1016/j.pbi.2021.102120", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.pbi.2021.102120"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-12-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2016.07.003", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:56Z", "type": "Journal Article", "created": "2016-07-08", "title": "Soil extracellular enzyme activities, soil carbon and nitrogen storage under nitrogen fertilization: A meta-analysis", "description": "Abstract   Nitrogen (N) fertilization affects the rate of soil organic carbon (SOC) decomposition by regulating extracellular enzyme activities (EEA). Extracellular enzymes have not been represented in global biogeochemical models. Understanding the relationships among EEA and SOC, soil N (TN), and soil microbial biomass carbon (MBC) under N fertilization would enable modeling of the influence of EEA on SOC decomposition. Based on 65 published studies, we synthesized the activities of \u03b1-1,4-glucosidase (AG), \u03b2-1,4-glucosidase (BG), \u03b2- d -cellobiosidase (CBH), \u03b2-1,4-xylosidase (BX), \u03b2-1,4-N-acetyl-glucosaminidase (NAG), leucine amino peptidase (LAP), urease (UREA), acid phosphatase (AP), phenol oxidase (PHO), and peroxidase (PEO) in response to N fertilization. The proxy variables for hydrolytic C acquisition enzymes (C-acq), N acquisition (N-acq), and oxidative decomposition (OX) were calculated as the sum of AG, BG, CBH and BX; AG and LAP; PHO and PEO, respectively. The relationships between response ratios (RRs) of EEA and SOC, TN, or MBC were explored when they were reported simultaneously. Results showed that N fertilization significantly increased CBH, C-acq, AP, BX, BG, AG, and UREA activities by 6.4, 9.1, 10.6, 11.0, 11.2, 12.0, and 18.6%, but decreased PEO, OX and PHO by 6.1, 7.9 and 11.1%, respectively. N fertilization enhanced SOC and TN by 7.6% and 15.3%, respectively, but inhibited MBC by 9.5%. Significant positive correlations were found only between the RRs of C-acq and MBC, suggesting that changes in combined hydrolase activities might act as a proxy for MBC under N fertilization. In contrast with other variables, the RRs of AP, MBC, and TN showed unidirectional trends under different edaphic, environmental, and physiological conditions. Our results provide the first comprehensive set of evidence of how hydrolase and oxidase activities respond to N fertilization in various ecosystems. Future large-scale model projections could incorporate the observed relationship between hydrolases and microbial biomass as a proxy for C acquisition under global N enrichment scenarios in different ecosystems.", "keywords": ["LITTER", "570", "Science & Technology", "MICROBIAL COMMUNITY", "Microbial Biomass Carbon (Mbc)", "Soil Science", "610", "Agriculture", "04 agricultural and veterinary sciences", "15. Life on land", "FOREST", "Meta-analysis", "Nitrogen Fertilization", "METHANE OXIDATION", "ECOSYSTEM", "0401 agriculture", " forestry", " and fisheries", "Soil Organic Carbon (Soc)", "ECOENZYMATIC STOICHIOMETRY", "DEPOSITION", "ELEVATED CO2", "Life Sciences & Biomedicine", "Extracellular Enzyme Activities (Eea)", "GLOBAL PERSPECTIVE", "RESPONSES"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2016.07.003"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2016.07.003", "name": "item", "description": "10.1016/j.soilbio.2016.07.003", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2016.07.003"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-10-01T00:00:00Z"}}, {"id": "10.1038/s41467-019-08348-1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:17:37Z", "type": "Journal Article", "created": "2019-02-14", "title": "Decadal biomass increment in early secondary succession woody ecosystems is increased by CO2 enrichment", "description": "Abstract<p>Increasing atmospheric CO2 stimulates photosynthesis which can increase net primary production (NPP), but at longer timescales may not necessarily increase plant biomass. Here we analyse the four decade-long CO2-enrichment experiments in woody ecosystems that measured total NPP and biomass. CO2 enrichment increased biomass increment by 1.05\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff890.26\uffe2\uff80\uff89kg\uffe2\uff80\uff89C\uffe2\uff80\uff89m\uffe2\uff88\uff922 over a full decade, a 29.1\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff8911.7% stimulation of biomass gain in these early-secondary-succession temperate ecosystems. This response is predictable by combining the CO2 response of NPP (0.16\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff890.03\uffe2\uff80\uff89kg\uffe2\uff80\uff89C\uffe2\uff80\uff89m\uffe2\uff88\uff922\uffe2\uff80\uff89y\uffe2\uff88\uff921) and the CO2-independent, linear slope between biomass increment and cumulative NPP (0.55\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff890.17). An ensemble of terrestrial ecosystem models fail to predict both terms correctly. Allocation to wood was a driver of across-site, and across-model, response variability and together with CO2-independence of biomass retention highlights the value of understanding drivers of wood allocation under ambient conditions to\uffc2\uffa0correctly interpret\uffc2\uffa0and predict CO2 responses.</p>", "keywords": ["[SDE] Environmental Sciences", "0106 biological sciences", "0301 basic medicine", "TREE MORTALITY", "550", "Climate", "Plant Biology", "Biochemistry", "01 natural sciences", "Trees", "atmospheric carbon dioxide", "ddc:550", "Biomass", "Photosynthesis", "Ecology", "Q", "FOREST PRODUCTIVITY", "Forestry", "Biological Sciences", "woody", "decadal biomass", "Wood", "[SDE]Environmental Sciences", "GROWTH", "ecosystems", "CARBON ALLOCATION", "570", "Science", "Biophysics", "333", "SWEETGUM PLANTATION", "Article", "03 medical and health sciences", "XXXXXX - Unknown", "forest ecology", "plant biomass", "Biochemistry", " Biophysics", " and Structural Biology", "Ecosystem", "photosynthesis", "Carbon Dioxide", "15. Life on land", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "NITROGEN", "CLIMATE", "13. Climate action", "and Structural Biology", "[SDE.BE]Environmental Sciences/Biodiversity and Ecology", "ELEVATED CO2", "SOIL CARBON", "RESPONSES"]}, "links": [{"href": "https://www.nature.com/articles/s41467-019-08348-1.pdf"}, {"href": "https://arrow.tudublin.ie/context/scschbioart/article/1214/viewcontent/nature.pdf"}, {"href": "https://escholarship.org/content/qt5m5806sh/qt5m5806sh.pdf"}, {"href": "https://doi.org/10.1038/s41467-019-08348-1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Communications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41467-019-08348-1", "name": "item", "description": "10.1038/s41467-019-08348-1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41467-019-08348-1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-02-14T00:00:00Z"}}, {"id": "10.1038/s41559-019-1055-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:17:40Z", "type": "Journal Article", "created": "2019-12-09", "title": "A systemic overreaction to years versus decades of warming in a subarctic grassland ecosystem", "description": "Temperature governs most biotic processes, yet we know little about how warming affects whole ecosystems. Here we examined the responses of 128\u2009components of a subarctic grassland to either 5-8 or >50\u2009years of soil warming. Warming of >50\u2009years drove the ecosystem to a new steady state possessing a distinct biotic composition and reduced species richness, biomass and soil organic matter. However, the warmed state was preceded by an overreaction to warming, which was related to organism physiology and was evident after 5-8\u2009years. Ignoring this overreaction yielded errors of >100% for 83\u2009variables when predicting their responses to a realistic warming scenario of 1\u2009\u00b0C over 50\u2009years, although some, including soil carbon content, remained stable after 5-8\u2009years. This study challenges long-term ecosystem predictions made from short-term observations, and provides a framework for characterization of ecosystem responses to sustained climate change.", "keywords": ["0301 basic medicine", "570", "Environmental management", "INCREASES", "Ecosystem ecology", "Climate Change", "Evolutionary biology", "TERM", "630", "Article", "Carbon Cycle", "Soil", "03 medical and health sciences", "SDG 13 - Climate Action", "106026 Ecosystem research", "Life Below Water", "Ecosystem", "106022 Mikrobiologie", "0303 health sciences", "Ecology", "Climate-change ecology", "SHIFTS", "Biological Sciences", "15. Life on land", "Grassland", "106026 \u00d6kosystemforschung", "13. Climate action", "SDG 13 \u2013 Ma\u00dfnahmen zum Klimaschutz", "FEEDBACKS", "106022 Microbiology", "VEGETATION", "SENSITIVITY", "Environmental Sciences", "SOIL RESPIRATION", "RESPONSES"]}, "links": [{"href": "https://escholarship.org/content/qt99v0g8pc/qt99v0g8pc.pdf"}, {"href": "https://doi.org/10.1038/s41559-019-1055-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Ecology%20%26amp%3B%20Evolution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41559-019-1055-3", "name": "item", "description": "10.1038/s41559-019-1055-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41559-019-1055-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-09T00:00:00Z"}}, {"id": "10.1088/1748-9326/aaeae7", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:14Z", "type": "Journal Article", "created": "2018-10-24", "title": "Using research networks to create the comprehensive datasets needed to assess nutrient availability as a key determinant of terrestrial carbon cycling", "description": "Open AccessA wide range of research shows that nutrient availability strongly influences terrestrial carbon (C) cycling and shapes ecosystem responses to environmental changes and hence terrestrial feedbacks to climate. Nonetheless, our understanding of nutrient controls remains far from complete and poorly quantified, at least partly due to a lack of informative, comparable, and accessible datasets at regional-to-global scales. A growing research infrastructure of multi-site networks are providing valuable data on C fluxes and stocks and are monitoring their responses to global environmental change and measuring responses to experimental treatments. These networks thus provide an opportunity for improving our understanding of C-nutrient cycle interactions and our ability to model them. However, coherent information on how nutrient cycling interacts with observed C cycle patterns is still generally lacking. Here, we argue that complementing available C-cycle measurements from monitoring and experimental sites with data characterizing nutrient availability will greatly enhance their power and will improve our capacity to forecast future trajectories of terrestrial C cycling and climate. Therefore, we propose a set of complementary measurements that are relatively easy to conduct routinely at any site or experiment and that, in combination with C cycle observations, can provide a robust characterization of the effects of nutrient availability across sites. In addition, we discuss the power of different observable variables for informing the formulation of models and constraining their predictions. Most widely available measurements of nutrient availability often do not align well with current modelling needs. This highlights the importance to foster the interaction between the empirical and modelling communities for setting future research priorities.", "keywords": ["Global vegetation models", "550", "manipulation experiments", "Terrestrial-Aquatic Linkages", "Kolefni", "01 natural sciences", "Nutrient cycle", "Agricultural and Biological Sciences", "Terrestrial ecosystem", "SDG 13 - Climate Action", "Climate change", "Jar\u00f0vegur", "Environmental resource management", "Global change", "General Environmental Science", "SDG 15 - Life on Land", "Carbon-nutrient cycle interactions", "2. Zero hunger", "Data syntheses", "Global and Planetary Change", "Ecology", "Geography", "Physics", "Life Sciences", "Application of Stable Isotopes in Trophic Ecology", "Cycling", "Carbon cycle", "04 agricultural and veterinary sciences", "Chemistry", "ORGANIC-MATTER", "Archaeology", "Physical Sciences", "Nutrient availability", "NET PRIMARY PRODUCTIVITY", "Ecosystem Functioning", "570", "LAND", "TROPICAL RAIN-FOREST", "carbon-nutrient cycle interactions", "data syntheses", "Soil Science", "Environmental science", "[SDU] Sciences of the Universe [physics]", "SOIL-PHOSPHORUS AVAILABILITY", "global vegetation models", "SDG 3 - Good Health and Well-being", "nutrients", "USE EFFICIENCY", "SDG 7 - Affordable and Clean Energy", "GLOBAL CHANGE", "Key (lock)", "Biology", "Ecosystem", "Manipulation experiments", "0105 earth and related environmental sciences", "Renewable Energy", " Sustainability and the Environment", "Ecosystem Structure", "Public Health", " Environmental and Occupational Health", "Nutrients", "15. Life on land", "Computer science", "[SDU]Sciences of the Universe [physics]", "13. Climate action", "ECOSYSTEM RESPONSES", "FOS: Biological sciences", "Global Methane Emissions and Impacts", "Environmental Science", "0401 agriculture", " forestry", " and fisheries", "NITROGEN-FIXATION", "Soil Carbon Dynamics and Nutrient Cycling in Ecosystems", "Nutrient Limitation", "ELEVATED CO2", "Nutrient"]}, "links": [{"href": "https://doi.org/10.1088/1748-9326/aaeae7"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Research%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1088/1748-9326/aaeae7", "name": "item", "description": "10.1088/1748-9326/aaeae7", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1088/1748-9326/aaeae7"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-12-07T00:00:00Z"}}, {"id": "10.1073/pnas.2201072119", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:01Z", "type": "Journal Article", "created": "2022-07-18", "title": "Ethylene inhibits rice root elongation in compacted soil via ABA- and auxin-mediated mechanisms", "description": "<p>             Soil compaction represents a major agronomic challenge, inhibiting root elongation and impacting crop yields. Roots use ethylene to sense soil compaction as the restricted air space causes this gaseous signal to accumulate around root tips. Ethylene inhibits root elongation and promotes radial expansion in compacted soil, but its mechanistic basis remains unclear. Here, we report that ethylene promotes abscisic acid (ABA) biosynthesis and cortical cell radial expansion. Rice mutants of ABA biosynthetic genes had attenuated cortical cell radial expansion in compacted soil, leading to better penetration. Soil compaction-induced ethylene also up-regulates the auxin biosynthesis gene             OsYUC8             . Mutants lacking OsYUC8 are better able to penetrate compacted soil. The auxin influx transporter OsAUX1 is also required to mobilize auxin from the root tip to the elongation zone during a root compaction response. Moreover,             osaux1             mutants penetrate compacted soil better than the wild-type roots and do not exhibit cortical cell radial expansion. We conclude that ethylene uses auxin and ABA as downstream signals to modify rice root cell elongation and radial expansion, causing root tips to swell and reducing their ability to penetrate compacted soil.           </p", "keywords": ["roots", "0301 basic medicine", "570", "Cell biology", "Arabidopsis", "Biophysics", "Plant Science", "Plant Roots", "Biochemistry", "Gene", "Catalysis", "Mixed Function Oxygenases", "Molecular Mechanisms of Plant Development and Regulation", "soil compaction", "Agricultural and Biological Sciences", "Soil", "Abscisic acid", "Ethylene", "03 medical and health sciences", "aba", "ethylene", "Auxin", "Elongation", "Biology", "Plant Proteins", "580", "2. Zero hunger", "0303 health sciences", "Multidisciplinary", "Indoleacetic Acids", "Mutant", "Life Sciences", "Oryza", "Plant Nutrient Uptake and Signaling Pathways", "Biological Sciences", "Ethylenes", "15. Life on land", "Materials science", "Root Aeration", "Chemistry", "ABA", "Plant Responses to Flooding Stress", "Ultimate tensile strength", "Mutation", "Metallurgy", "auxin", "Abscisic Acid"]}, "links": [{"href": "https://pnas.org/doi/pdf/10.1073/pnas.2201072119"}, {"href": "https://doi.org/10.1073/pnas.2201072119"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20National%20Academy%20of%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1073/pnas.2201072119", "name": "item", "description": "10.1073/pnas.2201072119", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1073/pnas.2201072119"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-07-18T00:00:00Z"}}, {"id": "10.1073/pnas.0706518104", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:00Z", "type": "Journal Article", "created": "2007-08-21", "title": "Increases In Nitrogen Uptake Rather Than Nitrogen-Use Efficiency Support Higher Rates Of Temperate Forest Productivity Under Elevated Co2", "description": "<p>             Forest ecosystems are important sinks for rising concentrations of atmospheric CO             2             . In previous research, we showed that net primary production (NPP) increased by 23 \uffc2\uffb1 2% when four experimental forests were grown under atmospheric concentrations of CO             2             predicted for the latter half of this century. Because nitrogen (N) availability commonly limits forest productivity, some combination of increased N uptake from the soil and more efficient use of the N already assimilated by trees is necessary to sustain the high rates of forest NPP under free-air CO             2             enrichment (FACE). In this study, experimental evidence demonstrates that the uptake of N increased under elevated CO             2             at the Rhinelander, Duke, and Oak Ridge National Laboratory FACE sites, yet fertilization studies at the Duke and Oak Ridge National Laboratory FACE sites showed that tree growth and forest NPP were strongly limited by N availability. By contrast, nitrogen-use efficiency increased under elevated CO             2             at the POP-EUROFACE site, where fertilization studies showed that N was not limiting to tree growth. Some combination of increasing fine root production, increased rates of soil organic matter decomposition, and increased allocation of carbon (C) to mycorrhizal fungi is likely to account for greater N uptake under elevated CO             2             . Regardless of the specific mechanism, this analysis shows that the larger quantities of C entering the below-ground system under elevated CO             2             result in greater N uptake, even in N-limited ecosystems. Biogeochemical models must be reformulated to allow C transfers below ground that result in additional N uptake under elevated CO             2             .           </p>", "keywords": ["rotation poplar plantation", "0106 biological sciences", "Nitrogen", "Climate", "atmospheric carbon-dioxide", "enrichment face", "organic nitrogen", "Biological Transport", "deciduous forest", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "01 natural sciences", "Trees", "Kinetics", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "populus-tremuloides", "community composition", "soil-n availability", "fine-root production", "Ecosystem", "ecosystem responses"]}, "links": [{"href": "https://doi.org/10.1073/pnas.0706518104"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20National%20Academy%20of%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1073/pnas.0706518104", "name": "item", "description": "10.1073/pnas.0706518104", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1073/pnas.0706518104"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-08-28T00:00:00Z"}}, {"id": "10.1073/pnas.0509038103", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:00Z", "type": "Journal Article", "created": "2006-04-14", "title": "Element interactions limit soil carbon storage", "description": "<p>             Rising levels of atmospheric CO             2             are thought to increase C sinks in terrestrial ecosystems. The potential of these sinks to mitigate CO             2             emissions, however, may be constrained by nutrients. By using metaanalysis, we found that elevated CO             2             only causes accumulation of soil C when N is added at rates well above typical atmospheric N inputs. Similarly, elevated CO             2             only enhances N             2             fixation, the major natural process providing soil N input, when other nutrients (e.g., phosphorus, molybdenum, and potassium) are added. Hence, soil C sequestration under elevated CO             2             is constrained both directly by N availability and indirectly by nutrients needed to support N             2             fixation.           </p>", "keywords": ["Greenhouse Effect", "Nitrogen", "cycles", "fine roots", "Plant Development", "01 natural sciences", "forest", "Soil", "Nitrogen Fixation", "elevated atmospheric co2", "Ecosystem", "0105 earth and related environmental sciences", "model", "biological nitrogen-fixation", "04 agricultural and veterinary sciences", "Carbon Dioxide", "Plants", "15. Life on land", "Carbon", "6. Clean water", "13. Climate action", "climate-change", "0401 agriculture", " forestry", " and fisheries", "grassland", "ecosystem responses", "metaanalysis"]}, "links": [{"href": "https://doi.org/10.1073/pnas.0509038103"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20National%20Academy%20of%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1073/pnas.0509038103", "name": "item", "description": "10.1073/pnas.0509038103", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1073/pnas.0509038103"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2006-04-25T00:00:00Z"}}, {"id": "10.1080/15592324.2018.1464855", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:12Z", "type": "Journal Article", "created": "2018-04-27", "title": "Not only priming: Soil microbiota may protect tomato from root pathogens", "description": "An increasing number of studies have investigated soil microbial biodiversity. However, the mechanisms regulating plant responses to soil microbiota are largely unknown. A previous work tested the hypothesis that tomato plants grown on native soils with their complex microbiotas respond differently from tomato growing in a sterile substrate. Two soils, suppressive or conducive to Fusarium oxysporum f. sp. lycopersici (FOL), and two genotypes susceptible and resistant to the same pathogen were considered. The work highlighted that the two tested soil microbiotas, irrespectively of their taxonomic composition, elicit the PAMP-triggered Immunity Pathway, the first level of plant defence, as well as an increased lignin synthesis, leading to an active protection when FOL is present in the soil. Here, we tested the expression of a panel of genes involved in Effector-Triggered Immunity (ETI), demonstrating that soil microbiota, beside genotype, affects plant resistance to FOL also modulating this pathway.", "keywords": ["suppressive and conducive soils", "susceptible and resistant genotypes", "0301 basic medicine", "2. Zero hunger", "0303 health sciences", "defence responses; Fusarium oxysporum f. sp. lycopersici; arbuscular mycorrhizal fungi; gene expression; lignin biosynthesis; microbiota; suppressive and conducive soils; susceptible and resistant genotypes; tomato; Plant Science", "arbuscular mycorrhizal fungi", "tomato", "15. Life on land", "defence responses", "03 medical and health sciences", "Fusarium", "Solanum lycopersicum", "microbiota", "gene expression", "Fusarium oxysporum f. sp. lycopersici", "lignin biosynthesis", "Soil Microbiology", "Plant Diseases"]}, "links": [{"href": "https://iris.unito.it/bitstream/2318/1677702/2/Chialva_et_al_2018_PostPrint.pdf"}, {"href": "https://www.tandfonline.com/doi/pdf/10.1080/15592324.2018.1464855"}, {"href": "https://doi.org/10.1080/15592324.2018.1464855"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Signaling%20%26amp%3B%20Behavior", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1080/15592324.2018.1464855", "name": "item", "description": "10.1080/15592324.2018.1464855", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1080/15592324.2018.1464855"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-04-27T00:00:00Z"}}, {"id": "10.1111/1365-2745.12593", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:30Z", "type": "Journal Article", "created": "2016-04-22", "title": "Drought History Affects Grassland Plant And Microbial Carbon Turnover During And After A Subsequent Drought Event", "description": "Summary<p>   <p>Drought periods are projected to become more severe and more frequent in many European regions. While effects of single strong droughts on plant and microbial carbon (C) dynamics have been studied in some detail, impacts of recurrent drought events are still little understood.</p>  <p>We tested whether the legacy of extreme experimental drought affects responses of plant and microbial C and nitrogen (N) turnover to further drought and rewetting. In a mountain grassland, we conducted a 13C pulse\uffe2\uff80\uff90chase experiment during a naturally occurring drought and rewetting event in plots previously exposed to experimental droughts and in ambient controls (AC). After labelling, we traced 13C below\uffe2\uff80\uff90ground allocation and incorporation into soil microbes using phospholipid fatty acid biomarkers.</p>  <p>Drought history (DH) had no effects on the standing shoot and fine root plant biomass. However, plants with experimental DH displayed decreased shoot N concentrations and increased fine root N concentrations relative to those in AC. During the natural drought, plants with DH assimilated and allocated less 13C below\uffe2\uff80\uff90ground; moreover, fine root respiration was reduced and not fuelled by fresh C compared to plants in AC.</p>  <p>Regardless of DH, microbial biomass remained stable during natural drought and rewetting. Although microbial communities initially differed in their composition between soils with and without DH, they responded to the natural drought and rewetting in a similar way: gram\uffe2\uff80\uff90positive bacteria increased, while fungal and gram\uffe2\uff80\uff90negative bacteria remained stable. In soils with DH, a strongly reduced uptake of recent plant\uffe2\uff80\uff90derived 13C in microbial biomarkers was observed during the natural drought, pointing to a smaller fraction of active microbes or to a microbial community that is less dependent on plant C.</p>  <p>Synthesis. Drought history can induce changes in above\uffe2\uff80\uff90 vs. below\uffe2\uff80\uff90ground plant N concentrations and affect the response of plant C turnover to further droughts and rewetting by decreasing plant C uptake and below\uffe2\uff80\uff90ground allocation. DH does not affect the responses of the microbial community to further droughts and rewetting, but alters microbial functioning, particularly the turnover of recent plant\uffe2\uff80\uff90derived carbon, during and after further drought periods.</p>  </p>", "keywords": ["0301 basic medicine", "plant-soil (below-ground) interactions", "NITROGEN TURNOVER", "Biomass Allocation", "microbial community composition", "Negibacteria", "drought", "phospholipid fatty acid", "nitrogen", "Microbial community composition", "Plant\u2013Soil (Below\u2010ground) Interactions", "Recovery", "ROOT RESPIRATION", "Plant-soil (below-ground) interactions", "CLIMATE EXTREMES", "C pulse labelling", "Below-ground carbon allocation", "2. Zero hunger", "106022 Mikrobiologie", "0303 health sciences", "SOIL INTERACTIONS", "below-ground carbon allocation", "C-13 pulse labelling", "Grassland", "6. Clean water", "Europe", "Phospholipid", "ORGANIC-MATTER", "Mountain Region", "Posibacteria", "DIOXIDE PULSES", "Phospholipid fatty acid", "106022 Microbiology", "Root/shoot Ratio", "Belowground Biomass", "Ecosystem Resilience", "Nitrogen", "Microbial Community", "Carbon Isotope", "Soil-vegetation Interaction", "recovery", "SUMMER DROUGHT", "03 medical and health sciences", "Rewetting", "Community Composition", "plant\u2013soil (below-ground) interactions", "WATER-STRESS", "resilience", "Drought", "Resilience", "RESILIENCE", "15. Life on land", "Turnover", "Microbial Activity", "13. Climate action", "Fatty Acid", "RESPONSES"]}, "links": [{"href": "https://doi.org/10.1111/1365-2745.12593"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/1365-2745.12593", "name": "item", "description": "10.1111/1365-2745.12593", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/1365-2745.12593"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-05-24T00:00:00Z"}}, {"id": "10.1111/avsc.12107", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:33Z", "type": "Journal Article", "created": "2014-05-02", "title": "Scale-Dependent Effects Of Grazing And Topographic Heterogeneity On Plant Species Richness In A Dutch Salt Marsh Ecosystem", "description": "AbstractQuestion<p>For over three decades, low\uffe2\uff80\uff90intensity grazing has been used to maintain or increase plant species richness in European natural areas, but the effects are highly variable. Thus far, good predictors of whether grazing will have positive effects on plant species richness are limited. How does the interplay between low\uffe2\uff80\uff90intensity grazing and topographic heterogeneity affect plant species richness at different spatial scales?</p>Location<p>Long\uffe2\uff80\uff90term grazed and ungrazed salt marshes of the Dutch Wadden Sea island of Schiermonnikoog.</p>Methods<p>We selected ten plots of 2200\uffc2\uffa0m2 in grazed and ungrazed areas of our study sites, and recorded and compared plant species richness in 0.1, 1, 10, 100 and 1000\uffc2\uffa0m2 subplots. Topographic heterogeneity was quantified at the plot scale using the standard deviation of the elevation derived from a high\uffe2\uff80\uff90resolution (5\uffc2\uffa0m\uffc2\uffa0\uffc3\uff97\uffc2\uffa05\uffc2\uffa0m) digital elevation model. We calculated species\uffe2\uff80\uff93area relationships to analyse our data.</p>Results<p>We found that large\uffe2\uff80\uff90scale topographic heterogeneity (based on the whole plot of 2200\uffc2\uffa0m2) positively affects plant species richness at all scales (even at the smallest 0.1\uffe2\uff80\uff90m2 scale), and that grazing has a positive additive effect at the small scales (0.1 and 10\uffc2\uffa0m2). While grazing also had a positive effect on species richness at larger scales (1000\uffc2\uffa0m2), the strength of the effect was dependent on the topographic heterogeneity at that scale. The effectiveness of grazing for increased plant species richness was highest at low topographic heterogeneity, and lowest at intermediate topographic heterogeneity. Effects of intermediate heterogeneity were probably counterbalanced by the effects of grazing.</p>Conclusions<p>Our results suggest that the variation in elevation is an important predictor of whether low\uffe2\uff80\uff90intensity grazing has positive effects on plant species richness or not. Grazing appears most beneficial at low topographic heterogeneity, but whether these findings hold for other grazed ecosystems will depend on several factors, most importantly, the relationship between topographic and abiotic heterogeneity. Results of our study are highly relevant for the application of low\uffe2\uff80\uff90intensity grazing as tool for conservation management in salt marshes and other natural areas.</p>", "keywords": ["0106 biological sciences", "2. Zero hunger", "Topography", "Livestock", "IMPACT", "Vascular plants", "Spatial scale", "DIVERSITY", "Nature management", "Biodiversity", "Conservation", "15. Life on land", "01 natural sciences", "SOIL", "Grazing lawns", "HERBIVORES", "BIODIVERSITY", "Herbivory", "VEGETATION", "14. Life underwater", "Plant-herbivore interactions", "GRASSLANDS", "RESTORATION", "RESPONSES", "ENVIRONMENTS"]}, "links": [{"href": "https://doi.org/10.1111/avsc.12107"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Vegetation%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/avsc.12107", "name": "item", "description": "10.1111/avsc.12107", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/avsc.12107"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-05-02T00:00:00Z"}}, {"id": "10.1111/gcb.14325", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:38Z", "type": "Journal Article", "created": "2018-05-26", "title": "Biotic responses buffer warming-induced soil organic carbon loss in Arctic tundra", "description": "Abstract<p>Climate warming can result in both abiotic (e.g., permafrost thaw) and biotic (e.g., microbial functional genes) changes in Arctic tundra. Recent research has incorporated dynamic permafrost thaw in Earth system models (ESMs) and indicates that Arctic tundra could be a significant future carbon (C) source due to the enhanced decomposition of thawed deep soil C. However, warming\uffe2\uff80\uff90induced biotic changes may influence biologically related parameters and the consequent projections inESMs. How model parameters associated with biotic responses will change under warming and to what extent these changes affect projected C budgets have not been carefully examined. In this study, we synthesized six data sets over 5\uffc2\uffa0years from a soil warming experiment at the Eight Mile Lake, Alaska, into the TerrestrialECOsystem (TECO) model with a probabilistic inversion approach. TheTECOmodel used multiple soil layers to track dynamics of thawed soil under different treatments. Our results show that warming increased light use efficiency of vegetation photosynthesis but decreased baseline (i.e., environment\uffe2\uff80\uff90corrected) turnover rates ofSOCin both the fast and slow pools in comparison with those under control. Moreover, the parameter changes generally amplified over time, suggesting processes of gradual physiological acclimation and functional gene shifts of both plants and microbes. TheTECOmodel predicted that field warming from 2009 to 2013 resulted in cumulative C losses of 224 or 87\uffc2\uffa0g/m2, respectively, without or with changes in those parameters. Thus, warming\uffe2\uff80\uff90induced parameter changes reduced predicted soil C loss by 61%. Our study suggests that it is critical to incorporate biotic changes inESMs to improve the model performance in predicting C dynamics in permafrost regions.</p>", "keywords": ["550", "Climate Change", "Permafrost", "acclimation", "carbon modeling", "01 natural sciences", "climate warming", "Soil", "Theoretical", "Models", "soil carbon", "Photosynthesis", "biotic responses", "data assimilation", "Tundra", "Soil Microbiology", "0105 earth and related environmental sciences", "Ecology", "500", "Biological Sciences", "Models", " Theoretical", "Plants", "15. Life on land", "Carbon", "Climate Action", "Environmental sciences", "Biological sciences", "Earth sciences", "13. Climate action", "Environmental Sciences", "Alaska", "permafrost"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/gcb.14325"}, {"href": "https://doi.org/10.1111/gcb.14325"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.14325", "name": "item", "description": "10.1111/gcb.14325", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.14325"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-06-12T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2006.01240.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:45Z", "type": "Journal Article", "created": "2006-09-26", "title": "Interactions between plant growth and soil nutrient cycling under elevated CO2: a meta-analysis", "description": "Abstract<p>free air carbon dioxide enrichment (FACE) and open top chamber (OTC) studies are valuable tools for evaluating the impact of elevated atmospheric CO2 on nutrient cycling in terrestrial ecosystems. Using meta\uffe2\uff80\uff90analytic techniques, we summarized the results of 117 studies on plant biomass production, soil organic matter dynamics and biological N2 fixation in FACE and OTC experiments. The objective of the analysis was to determine whether elevated CO2 alters nutrient cycling between plants and soil and if so, what the implications are for soil carbon (C) sequestration. Elevated CO2 stimulated gross N immobilization by 22%, whereas gross and net N mineralization rates remained unaffected. In addition, the soil C\uffe2\uff80\uff83:\uffe2\uff80\uff83N ratio and microbial N contents increased under elevated CO2 by 3.8% and 5.8%, respectively. Microbial C contents and soil respiration increased by 7.1% and 17.7%, respectively. Despite the stimulation of microbial activity, soil C input still caused soil C contents to increase by 1.2%\uffe2\uff80\uff83yr\uffe2\uff88\uff921. Namely, elevated CO2 stimulated overall above\uffe2\uff80\uff90 and belowground plant biomass by 21.5% and 28.3%, respectively, thereby outweighing the increase in CO2 respiration. In addition, when comparing experiments under both low and high N availability, soil C contents (+2.2%\uffe2\uff80\uff83yr\uffe2\uff88\uff921) and above\uffe2\uff80\uff90 and belowground plant growth (+20.1% and+33.7%) only increased under elevated CO2 in experiments receiving the high N treatments. Under low N availability, above\uffe2\uff80\uff90 and belowground plant growth increased by only 8.8% and 14.6%, and soil C contents did not increase. Nitrogen fixation was stimulated by elevated CO2 only when additional nutrients were supplied. These results suggest that the main driver of soil C sequestration is soil C input through plant growth, which is strongly controlled by nutrient availability. In unfertilized ecosystems, microbial N immobilization enhances acclimation of plant growth to elevated CO2 in the long\uffe2\uff80\uff90term. Therefore, increased soil C input and soil C sequestration under elevated CO2 can only be sustained in the long\uffe2\uff80\uff90term when additional nutrients are supplied.</p>", "keywords": ["2. Zero hunger", "enrichment", "microbial biomass", "atmospheric carbon-dioxide", "nitrogen-fixation", "dynamics", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water", "forest", "tallgrass prairie", "13. Climate action", "responses", "0401 agriculture", " forestry", " and fisheries", "organic-matter", "respiration"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2006.01240.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2006.01240.x", "name": "item", "description": "10.1111/j.1365-2486.2006.01240.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2006.01240.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2006-09-26T00:00:00Z"}}, {"id": "10.1371/journal.pbio.3002127", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:25Z", "type": "Journal Article", "created": "2023-05-18", "title": "A glycan receptor kinase facilitates intracellular accommodation of arbuscular mycorrhiza and symbiotic rhizobia in the legume Lotus japonicus", "description": "<p>Receptors that distinguish the multitude of microbes surrounding plants in the environment enable dynamic responses to the biotic and abiotic conditions encountered. In this study, we identify and characterise a glycan receptor kinase, EPR3a, closely related to the exopolysaccharide receptor EPR3. Epr3a is up-regulated in roots colonised by arbuscular mycorrhizal (AM) fungi and is able to bind glucans with a branching pattern characteristic of surface-exposed fungal glucans. Expression studies with cellular resolution show localised activation of the Epr3a promoter in cortical root cells containing arbuscules. Fungal infection and intracellular arbuscule formation are reduced in epr3a mutants. In vitro, the EPR3a ectodomain binds cell wall glucans in affinity gel electrophoresis assays. In microscale thermophoresis (MST) assays, rhizobial exopolysaccharide binding is detected with affinities comparable to those observed for EPR3, and both EPR3a and EPR3 bind a well-defined \uffce\uffb2-1,3/\uffce\uffb2-1,6 decasaccharide derived from exopolysaccharides of endophytic and pathogenic fungi. Both EPR3a and EPR3 function in the intracellular accommodation of microbes. However, contrasting expression patterns and divergent ligand affinities result in distinct functions in AM colonisation and rhizobial infection in Lotus japonicus. The presence of Epr3a and Epr3 genes in both eudicot and monocot plant genomes suggest a conserved function of these receptor kinases in glycan perception.</p", "keywords": ["570", "QH301-705.5", "ANZSRC::30 Agricultural", "MESORHIZOBIUM-LOTI", "Plant Roots", "veterinary and food sciences", "ROOT", "Polysaccharides", "Gene Expression Regulation", " Plant", "Mycorrhizae", "CELL", "Biology (General)", "Symbiosis", "Glucans", "Plant Proteins", "FUNGAL", "PERCEPTION", "ANZSRC::31 Biological sciences", "LAMINARIN", "Phosphotransferases", "500", "TRANSFORMATION", "EVOLUTION", "ANZSRC::32 Biomedical and clinical sciences", "DEFENSE RESPONSES", "Mutation", "Lotus", "EXOPOLYSACCHARIDE", "Root Nodules", " Plant", "Research Article", "Rhizobium"]}, "links": [{"href": "https://doi.org/10.1371/journal.pbio.3002127"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PLOS%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1371/journal.pbio.3002127", "name": "item", "description": "10.1371/journal.pbio.3002127", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1371/journal.pbio.3002127"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-05-18T00:00:00Z"}}, {"id": "10.1111/nph.15014", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:01Z", "type": "Journal Article", "created": "2018-02-09", "title": "Native soils with their microbiotas elicit a state of alert in tomato plants", "description": "Summary<p>   <p>Several studies have investigated soil microbial biodiversity, but understanding of the mechanisms underlying plant responses to soil microbiota remains in its infancy. Here, we focused on tomato (Solanum lycopersicum), testing the hypothesis that plants grown on native soils display different responses to soil microbiotas.</p>  <p>Using transcriptomics, proteomics, and biochemistry, we describe the responses of two tomato genotypes (susceptible or resistant to Fusarium oxysporum f. sp. lycopersici) grown on an artificial growth substrate and two native soils (conducive and suppressive to Fusarium).</p>  <p>Native soils affected tomato responses by modulating pathways involved in responses to oxidative stress, phenol biosynthesis, lignin deposition, and innate immunity, particularly in the suppressive soil. In tomato plants grown on steam\uffe2\uff80\uff90disinfected soils, total phenols and lignin decreased significantly. The inoculation of a mycorrhizal fungus partly rescued this response locally and systemically. Plants inoculated with the fungal pathogen showed reduced disease symptoms in the resistant genotype in both soils, but the susceptible genotype was partially protected from the pathogen only when grown on the suppressive soil.</p>  <p>The \uffe2\uff80\uff98state of alert\uffe2\uff80\uff99 detected in tomatoes reveals novel mechanisms operating in plants in native soils and the soil microbiota appears to be one of the drivers of these plant responses.</p>  </p>", "keywords": ["0301 basic medicine", "Proteome", "Propanols", "Arbuscular mycorrhizal fungi", "arbuscular mycorrhizal fungi", "tomato", "Lignin", "Models", " Biological", "Plant Roots", "defence responses", "Tomato", "Soil", "03 medical and health sciences", "Solanum lycopersicum", "Gene Expression Regulation", " Plant", "Stress", " Physiological", "microbiota", "Plant Immunity", "Soil Microbiology", "suppressive and conducive soils", "susceptible and resistant genotypes", "2. Zero hunger", "0303 health sciences", "Defence responses", "Microbiota", "15. Life on land", "Lignin biosynthesis", "Gene Ontology", "Susceptible and resistant genotypes", "Arbuscular mycorrhizal fungi; Defence responses; Lignin biosynthesis; Microbiota; Suppressive and conducive soils; Susceptible and resistant genotypes; Tomato; Physiology; Plant Science", "Suppressive and conducive soils", "Transcriptome", "lignin biosynthesis"]}, "links": [{"href": "https://iris.unito.it/bitstream/2318/1660820/1/Chialva%20et%20al%20Iris.pdf"}, {"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.15014"}, {"href": "https://doi.org/10.1111/nph.15014"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.15014", "name": "item", "description": "10.1111/nph.15014", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.15014"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-02-09T00:00:00Z"}}, {"id": "10.1242/dev.200363", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:20Z", "type": "Journal Article", "created": "2022-05-16", "title": "Arabidopsis root responses to salinity depend on pectin modification and cell wall sensing", "description": "ABSTRACT                <p>Owing to its detrimental effect on plant growth, salinity is an increasing worldwide problem for agriculture. To understand the molecular mechanisms activated in response to salt in Arabidopsis thaliana, we investigated the Catharanthus roseus receptor-like kinase 1-like family, which contains sensors that were previously shown to be involved in sensing the structural integrity of the cell walls. We found that herk1 the1-4 double mutants, lacking the function of HERKULES1 (HERK1) and combined with a gain-of-function allele of THESEUS1 (THE1), strongly respond to salt application, resulting in an intense activation of stress responses, similarly to plants lacking FERONIA (FER) function. We report that salt triggers pectin methyl esterase (PME) activation and show its requirement for the activation of several salt-dependent responses. Because chemical inhibition of PMEs alleviates these salt-induced responses, we hypothesize a model in which salt directly leads to cell wall modifications through the activation of PMEs. Responses to salt partly require the functionality of FER alone or HERK1/THE1 to attenuate salt effects, highlighting the complexity of the salt-sensing mechanisms that rely on cell wall integrity.</p", "keywords": ["2. Zero hunger", "Salinity", "Catharanthus roseus", "Arabidopsis Proteins", "Receptor-like kinase 1 like", "Arabidopsis", "15. Life on land", "Pectin modifications", "Cell wall integrity", "Cell Wall", "Gene Expression Regulation", " Plant", "Salt stress responses", "Plant cell wall signaling", "Pectins", "Research Article"]}, "links": [{"href": "https://doi.org/10.1242/dev.200363"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1242/dev.200363", "name": "item", "description": "10.1242/dev.200363", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1242/dev.200363"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-12-20T00:00:00Z"}}, {"id": "10.1556/168.2017.18.3.7", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:40Z", "type": "Journal Article", "created": "2018-02-12", "title": "Phytophagous hoverflies (Diptera: Syrphidae) as indicators of changing landscapes", "description": "Spatial and temporal differences in landscape patterns are of considerable interest for understanding ecological processes. In this study, we assessed habitat quality by using the Syrph The Net database and data on decreasing species richness over a 25-year period for the two largest phytophagous hoverfly genera (Merodon and Cheilosia). Furthermore, within this time frame, we explored congruence between ecological responses (species richness and Biodiversity Maintenance Function for these two genera) and landscape structural changes through correlation analysis. Our results indicate that landscapes have experienced changes in aggregation, isolation/connectivity and landscape diversity, with these parameters being significantly correlated with Cheilosia species richness loss and habitat quality. We conclude that the genus Cheilosia is a good bioindicator that can highlight not only the current quality of an area but also temporal changes in landscape patterns.", "keywords": ["0106 biological sciences", "MODELS", "INSECTS", "DIVERSITY", "LAND COVER CHANGE", "Cheilosia", "Land cover change", "01 natural sciences", "BIOINDICATORS", "CONNECTIVITY", "RICHNESS", "FORESTS", "14. Life underwater", "Merodon", "Connectivity", "LAND-USE", "Landscape structure", "Bioindicators; Cheilosia; Connectivity; Insects; Land cover change; Landscape structure; Merodon; Species richness", "15. Life on land", "EXTINCTION RISK", "Insects", "Ecology", " evolutionary biology", "QH540 Ecology / \u00f6kol\u00f3gia", "Bioindicators", "BIODIVERSITY", "ABUNDANCE", "Species richness", "RESPONSES"]}, "links": [{"href": "https://akademiai.com/doi/pdf/10.1556/168.2017.18.3.7"}, {"href": "https://doi.org/10.1556/168.2017.18.3.7"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Community%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1556/168.2017.18.3.7", "name": "item", "description": "10.1556/168.2017.18.3.7", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1556/168.2017.18.3.7"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-12-01T00:00:00Z"}}, {"id": "10.2307/2640985", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:28Z", "type": "Journal Article", "created": "2006-04-17", "description": "Elevated atmospheric CO2 has the potential to increase the production and alter the chemistry of organic substrates entering soil from plant production, the magnitude of which is constrained by soil-N availability. Because microbial growth in soil is limited by substrate inputs from plant production, we reasoned that changes in the amount and chemistry of these organic substrates could affect the composition of soil microbial com- munities and the cycling of N in soil. We studied microbial community composition and soil-N transformations beneath Populus tremuloides Michx. growing under experimental atmospheric CO2 (35.7 and 70.7 Pa) and soil-N-availability (low N 5 61 ng N\u00b7g 21 \u00b7d 21 and high N 5 319 ng N\u00b7g 21 \u00b7d 21 ) treatments. Atmospheric CO2 concentration was modified in large, open-top chambers, and we altered soil-N availability in open-bottom root boxes by mixing different proportions of A and C horizon material. We used phospholipid fatty-acid analysis to gain insight into microbial community composition and coupled this analysis to measurements of soil-N transformations using 15 N-pool dilution techniques. The infor- mation presented here is part of an integrated experiment designed to elucidate the phys- iological mechanisms controlling the flow of C and N in the plant-soil system. Our ob- jectives were (1) to determine whether changes in plant growth and tissue chemistry alter microbial community composition and soil-N cycling in response to increasing atmospheric CO2 and soil-N availability and (2) to integrate the results of our experiment into a synthesis of elevated atmospheric CO2 and the cycling of C and N in terrestrial ecosystems. After 2.5 growing seasons, microbial biomass, gross N mineralization, microbial im- mobilization, and nitrification (gross and net) were equivalent at ambient and elevated CO2, suggesting that increases in fine-root production and declines in fine-root N concentration were insufficient to alter the influence of native soil organic matter on microbial physiology; this was the case in both low- and high-N soil. Similarly, elevated CO2 did not alter the proportion of bacterial, actinomycetal, or fungal phospholipid fatty acids in low-N or high-N soil, indicating that changes in substrate input from greater plant growth under elevated CO2 did not alter microbial community composition. Our results differ from a substantial number of studies reporting increases and decreases in soil-N cycling under elevated CO 2. From our analysis, it appears that soil-N cycling responds to elevated atmospheric CO 2 in experimental situations where plant roots have fully colonized the soil and root-associated C inputs are sufficient to modify the influence of native soil organic matter on microbial physiology. In young developing ecosystems where plant roots have not fully exploited the soil, microbial metabolism appears to be regulated by relatively large pools of soil organic matter, rather than by the additional input of organic substrates under elevated CO 2.", "keywords": ["measurement-", "soil microorganisms", "Ecology and Evolutionary Biology", "nitrogen-: cycling-", "feedback", "microbial community composition", "techniques-", "Environmental-Sciences)", "01 natural sciences", "litter-plant", "biomass-", "gross and net", "124-38-9: CARBON DIOXIDE", "Spermatophytes-", "cycling-", "soil-organic-matter", "mineralization", "Spermatophyta-", "responses-", "phospholipid-fatty-acids", "2. Zero hunger", "Climatology- (Environmental-Sciences)", "Angiosperms-", "Angiospermae-", "Plants-", "global climate change", "microbial immobilization", "nutrient-", "Soil-Science", "6. Clean water", "metabolism-", "soil-N transformations", "transformation-", "substrates-", "7727-37-9: NITROGEN", "atmosphere-", "elevated atmospheric", "570", "nitrification-", "nitrogen immobilization", "Science", "Vascular-Plants", "poplars-", "phospholipid fatty acids (PFLAs)", "carbon-dioxide", "growth-", "soil-microbial-community-composition", "Salicaceae-: Dicotyledones-", "microbial-flora", "Populus tremuloides", "Plantae-", "organic-matter", "consortia-", "0105 earth and related environmental sciences", "communities-", "ecosystem", "analysis-", "atmospheric CO2 and soil-N availability", "soil-availability", "mineralization-", "carbon dioxide", "fatty-acids", "15. Life on land", "substrate-input", "Populus-tremuloides (Salicaceae-)", "13. Climate action", "roots-", "Terrestrial-Ecology (Ecology-", "composition-", "Dicots-", "immobilization-", "seasons-", "ecosystems-"], "contacts": [{"organization": "Zak, Donald R., Pregitzer, Kurt S., Curtis, Peter S., Holmes, William E.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.2307/2640985"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Applications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2307/2640985", "name": "item", "description": "10.2307/2640985", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2307/2640985"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2000-02-01T00:00:00Z"}}, {"id": "10.3390/microplastics2010001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:58Z", "type": "Journal Article", "created": "2022-12-27", "title": "Microplastics: A Review of Policies and Responses", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Although (micro)plastic contamination is a worldwide concern, most scientific literature only restates that issue rather than presenting strategies to cope with it. This critical review assembles the current knowledge on policies and responses to tackle plastic pollution, including peer-reviewed scientific literature, gray literature and relevant reports to provide: (1) a timeline of policies directly or indirectly addressing microplastics; (2) the most up-to-date upstream responses to prevent microplastics pollution, such as circular economy, behavioral change, development of bio-based polymers and market-based instruments as well as source-specific strategies, focusing on the clothing industry, tire and road wear particles, antifouling paints and recreational activities; (3) a set of downstream responses tackling microplastics, such as waste to energy, degradation, water treatment plants and litter clean-up strategies; and examples of (4) multifaceted responses focused on both mitigating and preventing microplastics pollution, e.g., approaches implemented in fisheries and aquaculture facilities. Preventive strategies and multifaceted responses are postulated as pivotal to handling the exacerbated release of microplastics in the environment, while downstream responses stand out as auxiliary strategies to the chief upstream responses. The information gathered here bridges the knowledge gaps on (micro)plastic pollution by providing a synthesized baseline material for further studies addressing this environmental issue.</p></article>", "keywords": ["0106 biological sciences", "ddc:550", "QH301-705.5", "QD415-436", "Microbiology", "Biochemistry", "01 natural sciences", "downstream responses", "QR1-502", "6. Clean water", "12. Responsible consumption", "mitigation", "prevention", "13. Climate action", "policymaking", "Life Science", "microplastic contamination", "14. Life underwater", "Biology (General)", "upstream responses", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://www.mdpi.com/2673-8929/2/1/1/pdf"}, {"href": "https://doi.org/10.3390/microplastics2010001"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Microplastics", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/microplastics2010001", "name": "item", "description": "10.3390/microplastics2010001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/microplastics2010001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-12-23T00:00:00Z"}}, {"id": "10.5281/zenodo.8017835", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:35Z", "type": "Dataset", "title": "Hydrobiogeochemical controls on the delivery of dissolved organic matter to boreal headwater streams", "description": "Dataset of continuous stream discharge, soil moisture, and hydrographic separation of Upper Horseshoe and Lower Horseshoe stream sites near Pynn's Brook, Newfoundland. Matched to continuous data where available are dissolved organic carbon concentration, absorbance at 254 nm and specific UV absorbance measurements from discrete samples collected via autosampler or grab-sampled.", "keywords": ["C-Q Hysteresis", "Watershed scale responses", "Preferential flowpaths", "CDOM", "DOC", "DOM", "Boreal headwater stream", "6. Clean water", "SUVA"], "contacts": [{"organization": "Roebuck, J. Alan Jr., Prestegard, Karen, Gaviria Salazar, Christian, Myers-Pigg, Allison N., Ziegler, Susan E.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.8017835"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.8017835", "name": "item", "description": "10.5281/zenodo.8017835", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.8017835"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-06-08T00:00:00Z"}}, {"id": "10182/16842", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:24:27Z", "type": "Journal Article", "created": "2023-05-18", "title": "A glycan receptor kinase facilitates intracellular accommodation of arbuscular mycorrhiza and symbiotic rhizobia in the legume Lotus japonicus", "description": "<p>Receptors that distinguish the multitude of microbes surrounding plants in the environment enable dynamic responses to the biotic and abiotic conditions encountered. In this study, we identify and characterise a glycan receptor kinase, EPR3a, closely related to the exopolysaccharide receptor EPR3. Epr3a is up-regulated in roots colonised by arbuscular mycorrhizal (AM) fungi and is able to bind glucans with a branching pattern characteristic of surface-exposed fungal glucans. Expression studies with cellular resolution show localised activation of the Epr3a promoter in cortical root cells containing arbuscules. Fungal infection and intracellular arbuscule formation are reduced in epr3a mutants. In vitro, the EPR3a ectodomain binds cell wall glucans in affinity gel electrophoresis assays. In microscale thermophoresis (MST) assays, rhizobial exopolysaccharide binding is detected with affinities comparable to those observed for EPR3, and both EPR3a and EPR3 bind a well-defined \uffce\uffb2-1,3/\uffce\uffb2-1,6 decasaccharide derived from exopolysaccharides of endophytic and pathogenic fungi. Both EPR3a and EPR3 function in the intracellular accommodation of microbes. However, contrasting expression patterns and divergent ligand affinities result in distinct functions in AM colonisation and rhizobial infection in Lotus japonicus. The presence of Epr3a and Epr3 genes in both eudicot and monocot plant genomes suggest a conserved function of these receptor kinases in glycan perception.</p", "keywords": ["570", "QH301-705.5", "ANZSRC::30 Agricultural", "MESORHIZOBIUM-LOTI", "Plant Roots", "veterinary and food sciences", "ROOT", "Polysaccharides", "Gene Expression Regulation", " Plant", "Mycorrhizae", "CELL", "Biology (General)", "Symbiosis", "Glucans", "Plant Proteins", "FUNGAL", "PERCEPTION", "ANZSRC::31 Biological sciences", "LAMINARIN", "Phosphotransferases", "500", "TRANSFORMATION", "EVOLUTION", "ANZSRC::32 Biomedical and clinical sciences", "DEFENSE RESPONSES", "Mutation", "Lotus", "EXOPOLYSACCHARIDE", "Root Nodules", " Plant", "Research Article", "Rhizobium"]}, "links": [{"href": "https://doi.org/10182/16842"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PLOS%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10182/16842", "name": "item", "description": "10182/16842", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10182/16842"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-05-18T00:00:00Z"}}, {"id": "11104/0341036", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:24:46Z", "type": "Journal Article", "created": "2022-07-18", "title": "Ethylene inhibits rice root elongation in compacted soil via ABA- and auxin-mediated mechanisms", "description": "<p>             Soil compaction represents a major agronomic challenge, inhibiting root elongation and impacting crop yields. Roots use ethylene to sense soil compaction as the restricted air space causes this gaseous signal to accumulate around root tips. Ethylene inhibits root elongation and promotes radial expansion in compacted soil, but its mechanistic basis remains unclear. Here, we report that ethylene promotes abscisic acid (ABA) biosynthesis and cortical cell radial expansion. Rice mutants of ABA biosynthetic genes had attenuated cortical cell radial expansion in compacted soil, leading to better penetration. Soil compaction-induced ethylene also up-regulates the auxin biosynthesis gene             OsYUC8             . Mutants lacking OsYUC8 are better able to penetrate compacted soil. The auxin influx transporter OsAUX1 is also required to mobilize auxin from the root tip to the elongation zone during a root compaction response. Moreover,             osaux1             mutants penetrate compacted soil better than the wild-type roots and do not exhibit cortical cell radial expansion. We conclude that ethylene uses auxin and ABA as downstream signals to modify rice root cell elongation and radial expansion, causing root tips to swell and reducing their ability to penetrate compacted soil.           </p", "keywords": ["roots", "0301 basic medicine", "570", "Cell biology", "Arabidopsis", "Biophysics", "Plant Science", "Plant Roots", "Biochemistry", "Gene", "Catalysis", "Mixed Function Oxygenases", "Molecular Mechanisms of Plant Development and Regulation", "soil compaction", "Agricultural and Biological Sciences", "Soil", "Abscisic acid", "Ethylene", "03 medical and health sciences", "aba", "ethylene", "Auxin", "Elongation", "Biology", "Plant Proteins", "580", "2. Zero hunger", "0303 health sciences", "Multidisciplinary", "Indoleacetic Acids", "Mutant", "Life Sciences", "Oryza", "Plant Nutrient Uptake and Signaling Pathways", "Biological Sciences", "Ethylenes", "15. Life on land", "Materials science", "Root Aeration", "Chemistry", "ABA", "Plant Responses to Flooding Stress", "Ultimate tensile strength", "Mutation", "Metallurgy", "auxin", "Abscisic Acid"]}, "links": [{"href": "https://pnas.org/doi/pdf/10.1073/pnas.2201072119"}, {"href": "https://doi.org/11104/0341036"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20National%20Academy%20of%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11104/0341036", "name": "item", "description": "11104/0341036", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11104/0341036"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-07-18T00:00:00Z"}}, {"id": "11380/1307595", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:24:49Z", "type": "Journal Article", "created": "2018-02-12", "title": "Phytophagous hoverflies (Diptera: Syrphidae) as indicators of changing landscapes", "description": "Spatial and temporal differences in landscape patterns are of considerable interest for understanding ecological processes. In this study, we assessed habitat quality by using the Syrph The Net database and data on decreasing species richness over a 25-year period for the two largest phytophagous hoverfly genera (Merodon and Cheilosia). Furthermore, within this time frame, we explored congruence between ecological responses (species richness and Biodiversity Maintenance Function for these two genera) and landscape structural changes through correlation analysis. Our results indicate that landscapes have experienced changes in aggregation, isolation/connectivity and landscape diversity, with these parameters being significantly correlated with Cheilosia species richness loss and habitat quality. We conclude that the genus Cheilosia is a good bioindicator that can highlight not only the current quality of an area but also temporal changes in landscape patterns.", "keywords": ["0106 biological sciences", "MODELS", "INSECTS", "DIVERSITY", "LAND COVER CHANGE", "Cheilosia", "Land cover change", "01 natural sciences", "BIOINDICATORS", "CONNECTIVITY", "RICHNESS", "FORESTS", "14. Life underwater", "Merodon", "Connectivity", "LAND-USE", "Landscape structure", "Bioindicators; Cheilosia; Connectivity; Insects; Land cover change; Landscape structure; Merodon; Species richness", "15. Life on land", "EXTINCTION RISK", "Insects", "Ecology", " evolutionary biology", "QH540 Ecology / \u00f6kol\u00f3gia", "Bioindicators", "BIODIVERSITY", "ABUNDANCE", "Species richness", "RESPONSES"]}, "links": [{"href": "https://akademiai.com/doi/pdf/10.1556/168.2017.18.3.7"}, {"href": "https://doi.org/11380/1307595"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Community%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11380/1307595", "name": "item", "description": "11380/1307595", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11380/1307595"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-12-01T00:00:00Z"}}, {"id": "11381/2983453", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:24:49Z", "type": "Journal Article", "created": "2024-04-17", "title": "Environmental drivers of increased ecosystem respiration in a warming tundra", "description": "Abstract<p>Arctic and alpine tundra ecosystems are large reservoirs of organic carbon1,2. Climate warming may stimulate ecosystem respiration and release carbon into the atmosphere3,4. The magnitude and persistency of this stimulation and the environmental mechanisms that drive its variation remain uncertain5\uffe2\uff80\uff937. This hampers the accuracy of global land carbon\uffe2\uff80\uff93climate feedback projections7,8. Here we synthesize 136 datasets from 56 open-top chamber in situ warming experiments located at 28 arctic and alpine tundra sites which have been running for less than 1\uffe2\uff80\uff89year up to 25\uffe2\uff80\uff89years. We show that a mean rise of 1.4\uffe2\uff80\uff89\uffc2\uffb0C [confidence interval (CI) 0.9\uffe2\uff80\uff932.0\uffe2\uff80\uff89\uffc2\uffb0C] in air and 0.4\uffe2\uff80\uff89\uffc2\uffb0C [CI 0.2\uffe2\uff80\uff930.7\uffe2\uff80\uff89\uffc2\uffb0C] in soil temperature results in an increase in growing season ecosystem respiration by 30% [CI 22\uffe2\uff80\uff9338%] (n\uffe2\uff80\uff89=\uffe2\uff80\uff89136). Our findings indicate that the stimulation of ecosystem respiration was due to increases in both plant-related and microbial respiration (n\uffe2\uff80\uff89=\uffe2\uff80\uff899) and continued for at least 25\uffe2\uff80\uff89years (n\uffe2\uff80\uff89=\uffe2\uff80\uff89136). The magnitude of the warming effects on respiration was driven by variation in warming-induced changes in local soil conditions, that is, changes in total nitrogen concentration and pH and by context-dependent spatial variation in these conditions, in particular total nitrogen concentration and the carbon:nitrogen ratio. Tundra sites with stronger nitrogen limitations and sites in which warming had stimulated plant and microbial nutrient turnover seemed particularly sensitive in their respiration response to warming. The results highlight the importance of local soil conditions and warming-induced changes therein for future climatic impacts on respiration.</p", "keywords": ["0301 basic medicine", "Ecosystem respiration", "tundra", "Time Factors", "ecosystem respiration", "550", "Datasets as Topic", "Global Warming", "climate warming", "Soil", "Soil Microbiology", "0303 health sciences", "CLIMATE-CHANGE", "Arctic Regions", "Temperature", "Hydrogen-Ion Concentration", "Plants", "Settore BIOS-01/C - Botanica ambientale e applicata", "Multidisciplinary Sciences", "Biologie et autres sciences connexes", "climate change", "Science & Technology - Other Topics", "Seasons", "Warming", "DECOMPOSITION", "570", "Climatologie et m\u00e9t\u00e9orologie", "General Science & Technology", "Nitrogen", "Cell Respiration", "Article", "Carbon Cycle", "03 medical and health sciences", "TEMPERATURE SENSITIVITY", "CYCLE", "Tundra", "METAANALYSIS", "Ecosystem", "Science & Technology", "organic carbon", "COMPONENTS", "15. Life on land", "PERMAFROST CARBON", "Carbon", "Climate Science", "TERRESTRIAL ECOSYSTEMS", "Settore BIOS-05/A - Ecologia", "13. Climate action", "SOIL CARBON", "Klimatvetenskap", "RESPONSES"]}, "links": [{"href": "https://www.nature.com/articles/s41586-024-07274-7.pdf"}, {"href": "https://constellation.uqac.ca/id/eprint/9807/1/Maes_et_al_2024_Nature.pdf"}, {"href": "https://doi.org/11381/2983453"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11381/2983453", "name": "item", "description": "11381/2983453", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11381/2983453"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-04-17T00:00:00Z"}}, {"id": "1854/LU-8743335", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:25:02Z", "type": "Report", "title": "Global maps of soil temperature", "description": "Research in global change ecology relies heavily on global climatic grids derived from estimates of air temperature in open areas at around 2 m above the ground. These climatic grids do not reflect conditions below vegetation canopies and near the ground surface, where critical ecosystem functions occur and most terrestrial species reside. Here, we provide global maps of soil temperature and bioclimatic variables at a 1-km(2) resolution for 0-5 and 5-15 cm soil depth. These maps were created by calculating the difference (i.e. offset) between in situ soil temperature measurements, based on time series from over 1200 1-km(2) pixels (summarized from 8519 unique temperature sensors) across all the world's major terrestrial biomes, and coarse-grained air temperature estimates from ERA5-Land (an atmospheric reanalysis by the European Centre for Medium-Range Weather Forecasts). We show that mean annual soil temperature differs markedly from the corresponding gridded air temperature, by up to 10 degrees C (mean = 3.0 +/- 2.1 degrees C), with substantial variation across biomes and seasons. Over the year, soils in cold and/or dry biomes are substantially warmer (+3.6 +/- 2.3 degrees C) than gridded air temperature, whereas soils in warm and humid environments are on average slightly cooler (-0.7 +/- 2.3 degrees C). The observed substantial and biome-specific offsets emphasize that the projected impacts of climate and climate change on near-surface biodiversity and ecosystem functioning are inaccurately assessed when air rather than soil temperature is used, especially in cold environments. The global soil-related bioclimatic variables provided here are an important step forward for any application in ecology and related disciplines. Nevertheless, we highlight the need to fill remaining geographic gaps by collecting more in situ measurements of microclimate conditions to further enhance the spatiotemporal resolution of global soil temperature products for ecological applications.", "keywords": ["Technology and Engineering", "soil temperature", "Biology and Life Sciences", "soil-dwelling organisms", "SNOW-COVER", "MITIGATION", "MOISTURE", "FOREST", "weather stations", "LITTER DECOMPOSITION", "PERMAFROST", "near-surface temperatures", "PLANT-RESPONSES", "bioclimatic variables", "CLIMATIC CONTROLS", "Earth and Environmental Sciences", "temperature offset", "SUITABILITY", "global maps", "MICROCLIMATE", "CBCE", "microclimate"]}, "links": [{"href": "https://doi.org/1854/LU-8743335"}, {"rel": "self", "type": "application/geo+json", "title": "1854/LU-8743335", "name": "item", "description": "1854/LU-8743335", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1854/LU-8743335"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "1871.1/3309bf72-4ad9-4331-981a-6fc05d319188", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:25:02Z", "type": "Journal Article", "created": "2019-12-09", "title": "A systemic overreaction to years versus decades of warming in a subarctic grassland ecosystem", "description": "Temperature governs most biotic processes, yet we know little about how warming affects whole ecosystems. Here we examined the responses of 128\u2009components of a subarctic grassland to either 5-8 or >50\u2009years of soil warming. Warming of >50\u2009years drove the ecosystem to a new steady state possessing a distinct biotic composition and reduced species richness, biomass and soil organic matter. However, the warmed state was preceded by an overreaction to warming, which was related to organism physiology and was evident after 5-8\u2009years. Ignoring this overreaction yielded errors of >100% for 83\u2009variables when predicting their responses to a realistic warming scenario of 1\u2009\u00b0C over 50\u2009years, although some, including soil carbon content, remained stable after 5-8\u2009years. This study challenges long-term ecosystem predictions made from short-term observations, and provides a framework for characterization of ecosystem responses to sustained climate change.", "keywords": ["0301 basic medicine", "570", "Environmental management", "INCREASES", "Ecosystem ecology", "Climate Change", "Evolutionary biology", "TERM", "630", "Article", "Carbon Cycle", "3103 Ecology (for-2020)", "Soil (mesh)", "Soil", "03 medical and health sciences", "14 Life Below Water (sdg)", "SDG 13 - Climate Action", "106026 Ecosystem research", "Life Below Water", "Ecosystem", "106022 Mikrobiologie", "0303 health sciences", "31 Biological Sciences (for-2020)", "41 Environmental Sciences (for-2020)", "Ecology", "Grassland (mesh)", "Climate-change ecology", "Ecosystem (mesh)", "SHIFTS", "3104 Evolutionary biology (for-2020)", "Biological Sciences", "15. Life on land", "4104 Environmental management (for-2020)", "Grassland", "Carbon Cycle (mesh)", "106026 \u00d6kosystemforschung", "13. Climate action", "SDG 13 \u2013 Ma\u00dfnahmen zum Klimaschutz", "FEEDBACKS", "Climate Change (mesh)", "106022 Microbiology", "VEGETATION", "SENSITIVITY", "Environmental Sciences", "SOIL RESPIRATION", "RESPONSES"]}, "links": [{"href": "https://escholarship.org/content/qt99v0g8pc/qt99v0g8pc.pdf"}, {"href": "https://doi.org/1871.1/3309bf72-4ad9-4331-981a-6fc05d319188"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Ecology%20%26amp%3B%20Evolution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1871.1/3309bf72-4ad9-4331-981a-6fc05d319188", "name": "item", "description": "1871.1/3309bf72-4ad9-4331-981a-6fc05d319188", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1871.1/3309bf72-4ad9-4331-981a-6fc05d319188"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-09T00:00:00Z"}}, {"id": "1893/33794", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:25:04Z", "type": "Journal Article", "created": "2021-12-30", "title": "Global maps of soil temperature", "description": "Abstract<p>Research in global change ecology relies heavily on global climatic grids derived from estimates of air temperature in open areas at around 2\uffc2\uffa0m above the ground. These climatic grids do not reflect conditions below vegetation canopies and near the ground surface, where critical ecosystem functions occur and most terrestrial species reside. Here, we provide global maps of soil temperature and bioclimatic variables at a 1\uffe2\uff80\uff90km2resolution for 0\uffe2\uff80\uff935 and 5\uffe2\uff80\uff9315\uffc2\uffa0cm soil depth. These maps were created by calculating the difference (i.e. offset) between in situ soil temperature measurements, based on time series from over 1200 1\uffe2\uff80\uff90km2pixels (summarized from 8519 unique temperature sensors) across all the world's major terrestrial biomes, and coarse\uffe2\uff80\uff90grained air temperature estimates from ERA5\uffe2\uff80\uff90Land (an atmospheric reanalysis by the European Centre for Medium\uffe2\uff80\uff90Range Weather Forecasts). We show that mean annual soil temperature differs markedly from the corresponding gridded air temperature, by up to 10\uffc2\uffb0C (mean\uffc2\uffa0=\uffc2\uffa03.0\uffc2\uffa0\uffc2\uffb1\uffc2\uffa02.1\uffc2\uffb0C), with substantial variation across biomes and seasons. Over the year, soils in cold and/or dry biomes are substantially warmer (+3.6\uffc2\uffa0\uffc2\uffb1\uffc2\uffa02.3\uffc2\uffb0C) than gridded air temperature, whereas soils in warm and humid environments are on average slightly cooler (\uffe2\uff88\uff920.7\uffc2\uffa0\uffc2\uffb1\uffc2\uffa02.3\uffc2\uffb0C). The observed substantial and biome\uffe2\uff80\uff90specific offsets emphasize that the projected impacts of climate and climate change on near\uffe2\uff80\uff90surface biodiversity and ecosystem functioning are inaccurately assessed when air rather than soil temperature is used, especially in cold environments. The global soil\uffe2\uff80\uff90related bioclimatic variables provided here are an important step forward for any application in ecology and related disciplines. Nevertheless, we highlight the need to fill remaining geographic gaps by collecting more in situ measurements of microclimate conditions to further enhance the spatiotemporal resolution of global soil temperature products for ecological applications.</p", "keywords": ["0106 biological sciences", "Bioclimatic variables; Global maps; Microclimate; Near-surface temperatures; Soil temperature; Soil-dwelling organisms; Temperature offset; Weather stations; Climate change; Temperature; Ecosystem; Soil", "791", "550", ":Zoology and botany: 480 [VDP]", "VDP::Zoologiske og botaniske fag: 480", "551", "Q1", "7. Clean energy", "01 natural sciences", "41 Environmental sciences", "Global map", "SDG 13 - Climate Action", "Soil temperature", "MICROCLIMATE", "bepress|Physical Sciences and Mathematics|Environmental Sciences", "soil-dwelling organism", "bioclimatic variables; global maps; microclimate; near-surface temperatures; soil temperature; soil-dwelling organisms; temperature offset; weather stations", "weather station", "GB", "http://aims.fao.org/aos/agrovoc/c_34836", "Geology", "16. Peace & justice", "Settore BIOS-01/C - Botanica ambientale e applicata", "6. Clean water", "Near-surface soil temperature", "international", "[SDE]Environmental Sciences", "551: Geologie und Hydrologie", "Near-surface temperature", "Near-surface temperatures", "soil temperature", "P40 - M\u00e9t\u00e9orologie et climatologie", "577", "bepress|Physical Sciences and Mathematics|Earth Sciences", "MITIGATION", "bepress|Life Sciences|Ecology and Evolutionary Biology", "12. Responsible consumption", "near-surface temperatures", "bepress|Physical Sciences and Mathematics|Oceanography and Atmospheric Sciences and Meteorology|Climate", "bioclimatic variables", "Bioclimatic variables", "Settore BIO/07 - ECOLOGIA", "temperature offset", "global maps", "http://aims.fao.org/aos/agrovoc/c_1344", "577: \u00d6kologie", "global map", "Biology", "Ecosystem", "Ekologi", "http://aims.fao.org/aos/agrovoc/c_24894", "Science & Technology", "ddc:550", "9. Industry and infrastructure", "31 Biological sciences", "Biology and Life Sciences", "Microclimate", "06 Biological Sciences", "15. Life on land", "weather stations", "bepress|Physical Sciences and Mathematics|Environmental Sciences|Environmental Monitoring", "900", "cartographie", "microclimate", "Klimatvetenskap", "[SDE] Environmental Sciences", "Biodiversity & Conservation", "05 Environmental Sciences", "Weather stations", "Temperature offset", "Plan_S-Compliant-OA", "Soil", "bepress|Life Sciences", "Geolog\u00eda", "Research Articles", "info:eu-repo/classification/ddc/570", "changement climatique", "Ecology", "zone climatique", "4. Education", "Temperature", "Biological Sciences", "bioclimatologie", "FOREST", "Weather station", "Chemistry", "Biodiversity Conservation", "Life Sciences & Biomedicine", "bepress|Physical Sciences and Mathematics", "Technology and Engineering", "http://aims.fao.org/aos/agrovoc/c_1669", "bioclimatic variable", "Climate Change", "soil-dwelling organisms", "Environmental Sciences & Ecology", "MOISTURE", "LITTER DECOMPOSITION", "PERMAFROST", "near-surface temperature", "temp\u00e9rature du sol", "bepress|Physical Sciences and Mathematics|Oceanography and Atmospheric Sciences and Meteorology", "SUITABILITY", "G1", "VDP::Mathematics and natural scienses: 400::Zoology and botany: 480", "Global maps", "http://aims.fao.org/aos/agrovoc/c_1666", ":Zoologiske og botaniske fag: 480 [VDP]", "Soil-dwelling organisms", "0105 earth and related environmental sciences", "info:eu-repo/classification/ddc/550", "r\u00e9chauffement global", "Climate Change; Ecosystem; Microclimate; Soil; Temperature; bioclimatic variables; global maps; microclimate; near-surface temperatures; soil temperature; soil-dwelling organisms; temperature offset; weather stations", "http://aims.fao.org/aos/agrovoc/c_9260", "P30 - Sciences et am\u00e9nagement du sol", "Aquatic Ecology", "Bioclimatic variable", "SNOW-COVER", "Climate Science", "37 Earth sciences", "Climate Action", "bepress|Physical Sciences and Mathematics|Earth Sciences|Soil Science", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "Earth sciences", "variation saisonni\u00e8re", "PLANT-RESPONSES", "CLIMATIC CONTROLS", "Soil-dwelling organism", "Settore BIOS-05/A - Ecologia", "13. Climate action", "Earth and Environmental Sciences", "VDP::Matematikk og naturvitenskap: 400::Zoologiske og botaniske fag: 480", "VDP::Zoology and botany: 480", "[SDE.BE]Environmental Sciences/Biodiversity and Ecology", "CBCE", "http://aims.fao.org/aos/agrovoc/c_7197", "Environmental Sciences"]}, "links": [{"href": "https://ray.yorksj.ac.uk/id/eprint/5803/1/20211222_SoilTemp_maps_preformatted.pdf"}, {"href": "http://dspace.stir.ac.uk/bitstream/1893/33794/1/Lembrechts-etal-GCB-2022.pdf"}, {"href": "https://eprints.whiterose.ac.uk/183991/1/Global%20Change%20Biology%20-%202022%20-%20Lembrechts%20-%20Global%20maps%20of%20soil%20temperature.pdf"}, {"href": "https://iris.cnr.it/bitstream/20.500.14243/445619/1/prod_462419-doc_189996.pdf"}, {"href": "https://openpub.fmach.it/bitstream/10449/74200/1/Global%20Change%20Biology%20-%202022%20-%20Lembrechts%20-%20Global%20maps%20of%20soil%20temperature.pdf"}, {"href": "https://iris.unica.it/bitstream/11584/332967/1/2022_Global_maps_soil_temperature_GlobalChangeBiology.pdf"}, {"href": "https://ricerca.univaq.it/bitstream/11697/178559/2/Global%20Change%20Biology%20-%202022%20-%20Lembrechts%20-%20Global%20maps%20of%20soil%20temperature.pdf"}, {"href": "https://vb.gamtc.lt/object/elaba:126634244/126634244.pdf"}, {"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/gcb.16060"}, {"href": "https://escholarship.org/content/qt6hg3313z/qt6hg3313z.pdf"}, {"href": "https://doi.org/1893/33794"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1893/33794", "name": "item", "description": "1893/33794", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1893/33794"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-03-21T00:00:00Z"}}, {"id": "20.500.11815/1261", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:25:13Z", "type": "Journal Article", "created": "2018-10-24", "title": "Using research networks to create the comprehensive datasets needed to assess nutrient availability as a key determinant of terrestrial carbon cycling", "description": "Open AccessA wide range of research shows that nutrient availability strongly influences terrestrial carbon (C) cycling and shapes ecosystem responses to environmental changes and hence terrestrial feedbacks to climate. Nonetheless, our understanding of nutrient controls remains far from complete and poorly quantified, at least partly due to a lack of informative, comparable, and accessible datasets at regional-to-global scales. A growing research infrastructure of multi-site networks are providing valuable data on C fluxes and stocks and are monitoring their responses to global environmental change and measuring responses to experimental treatments. These networks thus provide an opportunity for improving our understanding of C-nutrient cycle interactions and our ability to model them. However, coherent information on how nutrient cycling interacts with observed C cycle patterns is still generally lacking. Here, we argue that complementing available C-cycle measurements from monitoring and experimental sites with data characterizing nutrient availability will greatly enhance their power and will improve our capacity to forecast future trajectories of terrestrial C cycling and climate. Therefore, we propose a set of complementary measurements that are relatively easy to conduct routinely at any site or experiment and that, in combination with C cycle observations, can provide a robust characterization of the effects of nutrient availability across sites. In addition, we discuss the power of different observable variables for informing the formulation of models and constraining their predictions. Most widely available measurements of nutrient availability often do not align well with current modelling needs. This highlights the importance to foster the interaction between the empirical and modelling communities for setting future research priorities.", "keywords": ["Global vegetation models", "550", "manipulation experiments", "Terrestrial-Aquatic Linkages", "Kolefni", "01 natural sciences", "Nutrient cycle", "Agricultural and Biological Sciences", "Terrestrial ecosystem", "SDG 13 - Climate Action", "Climate change", "Jar\u00f0vegur", "Environmental resource management", "Global change", "General Environmental Science", "SDG 15 - Life on Land", "Carbon-nutrient cycle interactions", "2. Zero hunger", "Data syntheses", "Global and Planetary Change", "Ecology", "Geography", "Physics", "Life Sciences", "Application of Stable Isotopes in Trophic Ecology", "Cycling", "Carbon cycle", "04 agricultural and veterinary sciences", "Chemistry", "ORGANIC-MATTER", "Archaeology", "Physical Sciences", "Nutrient availability", "NET PRIMARY PRODUCTIVITY", "Ecosystem Functioning", "570", "LAND", "TROPICAL RAIN-FOREST", "carbon-nutrient cycle interactions", "data syntheses", "Soil Science", "Environmental science", "[SDU] Sciences of the Universe [physics]", "SOIL-PHOSPHORUS AVAILABILITY", "global vegetation models", "SDG 3 - Good Health and Well-being", "nutrients", "USE EFFICIENCY", "SDG 7 - Affordable and Clean Energy", "GLOBAL CHANGE", "Key (lock)", "Biology", "Ecosystem", "Manipulation experiments", "0105 earth and related environmental sciences", "Renewable Energy", " Sustainability and the Environment", "Ecosystem Structure", "Public Health", " Environmental and Occupational Health", "Nutrients", "15. Life on land", "Computer science", "[SDU]Sciences of the Universe [physics]", "13. Climate action", "ECOSYSTEM RESPONSES", "FOS: Biological sciences", "Global Methane Emissions and Impacts", "Environmental Science", "0401 agriculture", " forestry", " and fisheries", "NITROGEN-FIXATION", "Soil Carbon Dynamics and Nutrient Cycling in Ecosystems", "Nutrient Limitation", "ELEVATED CO2", "Nutrient"]}, "links": [{"href": "https://doi.org/20.500.11815/1261"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Research%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "20.500.11815/1261", "name": "item", "description": "20.500.11815/1261", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/20.500.11815/1261"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-12-07T00:00:00Z"}}, {"id": "2994175618", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:25:46Z", "type": "Journal Article", "created": "2019-12-09", "title": "A systemic overreaction to years versus decades of warming in a subarctic grassland ecosystem", "description": "Temperature governs most biotic processes, yet we know little about how warming affects whole ecosystems. Here we examined the responses of 128\u2009components of a subarctic grassland to either 5-8 or >50\u2009years of soil warming. Warming of >50\u2009years drove the ecosystem to a new steady state possessing a distinct biotic composition and reduced species richness, biomass and soil organic matter. However, the warmed state was preceded by an overreaction to warming, which was related to organism physiology and was evident after 5-8\u2009years. Ignoring this overreaction yielded errors of >100% for 83\u2009variables when predicting their responses to a realistic warming scenario of 1\u2009\u00b0C over 50\u2009years, although some, including soil carbon content, remained stable after 5-8\u2009years. This study challenges long-term ecosystem predictions made from short-term observations, and provides a framework for characterization of ecosystem responses to sustained climate change.", "keywords": ["0301 basic medicine", "570", "Environmental management", "INCREASES", "Ecosystem ecology", "Climate Change", "Evolutionary biology", "TERM", "630", "Article", "Carbon Cycle", "Soil", "03 medical and health sciences", "SDG 13 - Climate Action", "106026 Ecosystem research", "Life Below Water", "Ecosystem", "106022 Mikrobiologie", "0303 health sciences", "Ecology", "Climate-change ecology", "SHIFTS", "Biological Sciences", "15. Life on land", "Grassland", "106026 \u00d6kosystemforschung", "13. Climate action", "SDG 13 \u2013 Ma\u00dfnahmen zum Klimaschutz", "FEEDBACKS", "106022 Microbiology", "VEGETATION", "SENSITIVITY", "Environmental Sciences", "SOIL RESPIRATION", "RESPONSES"]}, "links": [{"href": "https://escholarship.org/content/qt99v0g8pc/qt99v0g8pc.pdf"}, {"href": "https://doi.org/2994175618"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Ecology%20%26amp%3B%20Evolution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "2994175618", "name": "item", "description": "2994175618", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/2994175618"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-12-09T00:00:00Z"}}, {"id": "2804595293", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:25:39Z", "type": "Journal Article", "created": "2018-05-26", "title": "Biotic responses buffer warming\u2010induced soil organic carbon loss in Arctic tundra", "description": "Abstract<p>Climate warming can result in both abiotic (e.g., permafrost thaw) and biotic (e.g., microbial functional genes) changes in Arctic tundra. Recent research has incorporated dynamic permafrost thaw in Earth system models (ESMs) and indicates that Arctic tundra could be a significant future carbon (C) source due to the enhanced decomposition of thawed deep soil C. However, warming\uffe2\uff80\uff90induced biotic changes may influence biologically related parameters and the consequent projections inESMs. How model parameters associated with biotic responses will change under warming and to what extent these changes affect projected C budgets have not been carefully examined. In this study, we synthesized six data sets over 5\uffc2\uffa0years from a soil warming experiment at the Eight Mile Lake, Alaska, into the TerrestrialECOsystem (TECO) model with a probabilistic inversion approach. TheTECOmodel used multiple soil layers to track dynamics of thawed soil under different treatments. Our results show that warming increased light use efficiency of vegetation photosynthesis but decreased baseline (i.e., environment\uffe2\uff80\uff90corrected) turnover rates ofSOCin both the fast and slow pools in comparison with those under control. Moreover, the parameter changes generally amplified over time, suggesting processes of gradual physiological acclimation and functional gene shifts of both plants and microbes. TheTECOmodel predicted that field warming from 2009 to 2013 resulted in cumulative C losses of 224 or 87\uffc2\uffa0g/m2, respectively, without or with changes in those parameters. Thus, warming\uffe2\uff80\uff90induced parameter changes reduced predicted soil C loss by 61%. Our study suggests that it is critical to incorporate biotic changes inESMs to improve the model performance in predicting C dynamics in permafrost regions.</p", "keywords": ["550", "Climate Change", "Permafrost", "acclimation", "carbon modeling", "01 natural sciences", "climate warming", "Soil", "Theoretical", "Models", "soil carbon", "Photosynthesis", "biotic responses", "data assimilation", "Tundra", "Soil Microbiology", "0105 earth and related environmental sciences", "Ecology", "500", "Biological Sciences", "Models", " Theoretical", "Plants", "15. Life on land", "Carbon", "Climate Action", "Environmental sciences", "Biological sciences", "Earth sciences", "13. Climate action", "Environmental Sciences", "Alaska", "permafrost"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/gcb.14325"}, {"href": "https://doi.org/2804595293"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "2804595293", "name": "item", "description": "2804595293", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/2804595293"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-06-12T00:00:00Z"}}, {"id": "29802797", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:25:45Z", "type": "Journal Article", "created": "2018-05-26", "title": "Biotic responses buffer warming\u2010induced soil organic carbon loss in Arctic tundra", "description": "Abstract<p>Climate warming can result in both abiotic (e.g., permafrost thaw) and biotic (e.g., microbial functional genes) changes in Arctic tundra. Recent research has incorporated dynamic permafrost thaw in Earth system models (ESMs) and indicates that Arctic tundra could be a significant future carbon (C) source due to the enhanced decomposition of thawed deep soil C. However, warming\uffe2\uff80\uff90induced biotic changes may influence biologically related parameters and the consequent projections inESMs. How model parameters associated with biotic responses will change under warming and to what extent these changes affect projected C budgets have not been carefully examined. In this study, we synthesized six data sets over 5\uffc2\uffa0years from a soil warming experiment at the Eight Mile Lake, Alaska, into the TerrestrialECOsystem (TECO) model with a probabilistic inversion approach. TheTECOmodel used multiple soil layers to track dynamics of thawed soil under different treatments. Our results show that warming increased light use efficiency of vegetation photosynthesis but decreased baseline (i.e., environment\uffe2\uff80\uff90corrected) turnover rates ofSOCin both the fast and slow pools in comparison with those under control. Moreover, the parameter changes generally amplified over time, suggesting processes of gradual physiological acclimation and functional gene shifts of both plants and microbes. TheTECOmodel predicted that field warming from 2009 to 2013 resulted in cumulative C losses of 224 or 87\uffc2\uffa0g/m2, respectively, without or with changes in those parameters. Thus, warming\uffe2\uff80\uff90induced parameter changes reduced predicted soil C loss by 61%. Our study suggests that it is critical to incorporate biotic changes inESMs to improve the model performance in predicting C dynamics in permafrost regions.</p", "keywords": ["550", "Climate Change", "Permafrost", "acclimation", "carbon modeling", "01 natural sciences", "climate warming", "Soil", "Theoretical", "Models", "soil carbon", "Photosynthesis", "biotic responses", "data assimilation", "Tundra", "Soil Microbiology", "0105 earth and related environmental sciences", "Ecology", "500", "Biological Sciences", "Models", " Theoretical", "Plants", "15. Life on land", "Carbon", "Climate Action", "Environmental sciences", "Biological sciences", "Earth sciences", "13. Climate action", "Environmental Sciences", "Alaska", "permafrost"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/gcb.14325"}, {"href": "https://doi.org/29802797"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "29802797", "name": "item", "description": "29802797", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/29802797"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-06-12T00:00:00Z"}}, {"id": "3170027316", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:26:02Z", "type": "Journal Article", "created": "2022-05-16", "title": "Arabidopsis root responses to salinity depend on pectin modification and cell wall sensing", "description": "ABSTRACT                <p>Owing to its detrimental effect on plant growth, salinity is an increasing worldwide problem for agriculture. To understand the molecular mechanisms activated in response to salt in Arabidopsis thaliana, we investigated the Catharanthus roseus receptor-like kinase 1-like family, which contains sensors that were previously shown to be involved in sensing the structural integrity of the cell walls. We found that herk1 the1-4 double mutants, lacking the function of HERKULES1 (HERK1) and combined with a gain-of-function allele of THESEUS1 (THE1), strongly respond to salt application, resulting in an intense activation of stress responses, similarly to plants lacking FERONIA (FER) function. We report that salt triggers pectin methyl esterase (PME) activation and show its requirement for the activation of several salt-dependent responses. Because chemical inhibition of PMEs alleviates these salt-induced responses, we hypothesize a model in which salt directly leads to cell wall modifications through the activation of PMEs. Responses to salt partly require the functionality of FER alone or HERK1/THE1 to attenuate salt effects, highlighting the complexity of the salt-sensing mechanisms that rely on cell wall integrity.</p", "keywords": ["2. Zero hunger", "Salinity", "Catharanthus roseus", "Arabidopsis Proteins", "Receptor-like kinase 1 like", "Arabidopsis", "15. Life on land", "Pectin modifications", "Cell wall integrity", "Cell Wall", "Gene Expression Regulation", " Plant", "Salt stress responses", "Plant cell wall signaling", "Pectins", "Research Article"]}, "links": [{"href": "https://doi.org/3170027316"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "3170027316", "name": "item", "description": "3170027316", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/3170027316"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-12-20T00:00:00Z"}}, {"id": "3214822037", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:26:06Z", "type": "Journal Article", "created": "2021-11-30", "title": "Fighting salt or enemies: shared perception and signaling strategies", "description": "Plants react to a myriad of biotic and abiotic environmental signals through specific cellular mechanisms required for survival under stress. Although pathogen perception has been widely studied and characterized, salt stress perception and signaling remain largely elusive. Recent observations, obtained in the model plant Arabidopsis thaliana, show that perception of specific features of pathogens also allows plants to mount salt stress resilience pathways, highlighting the possibility that salt sensing and pathogen perception mechanisms partially overlap. We discuss these overlapping strategies and examine the emerging role of A.\u00a0thaliana cell wall and plasma membrane components in activating both salt- and pathogen-induced responses, as part of exquisite mechanisms underlying perception of damage and danger. This knowledge helps understanding the complexity of plant responses to pathogens and salinity, leading to new hypotheses that could explain why plants evolved similar strategies to respond to these, at first sight, very different types of stimuli.", "keywords": ["0301 basic medicine", "Salinity", "0303 health sciences", "Pathogen elicitors", "Arabidopsis Proteins", "Arabidopsis", "Plants", "15. Life on land", "Salt Stress", "03 medical and health sciences", "Cell wall sensing", "Plant immune responses", "Damage-associated molecular patterns (DAMPs)", "Gene Expression Regulation", " Plant", "Stress", " Physiological", "Perception", "Danger signals"]}, "links": [{"href": "https://doi.org/3214822037"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Current%20Opinion%20in%20Plant%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "3214822037", "name": "item", "description": "3214822037", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/3214822037"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-12-01T00:00:00Z"}}, {"id": "34856479", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:26:13Z", "type": "Journal Article", "created": "2021-11-30", "title": "Fighting salt or enemies: shared perception and signaling strategies", "description": "Plants react to a myriad of biotic and abiotic environmental signals through specific cellular mechanisms required for survival under stress. Although pathogen perception has been widely studied and characterized, salt stress perception and signaling remain largely elusive. Recent observations, obtained in the model plant Arabidopsis thaliana, show that perception of specific features of pathogens also allows plants to mount salt stress resilience pathways, highlighting the possibility that salt sensing and pathogen perception mechanisms partially overlap. We discuss these overlapping strategies and examine the emerging role of A.\u00a0thaliana cell wall and plasma membrane components in activating both salt- and pathogen-induced responses, as part of exquisite mechanisms underlying perception of damage and danger. This knowledge helps understanding the complexity of plant responses to pathogens and salinity, leading to new hypotheses that could explain why plants evolved similar strategies to respond to these, at first sight, very different types of stimuli.", "keywords": ["0301 basic medicine", "Salinity", "0303 health sciences", "Pathogen elicitors", "Arabidopsis Proteins", "Arabidopsis", "Plants", "15. Life on land", "Salt Stress", "03 medical and health sciences", "Cell wall sensing", "Plant immune responses", "Damage-associated molecular patterns (DAMPs)", "Gene Expression Regulation", " Plant", "Stress", " Physiological", "Perception", "Danger signals"]}, "links": [{"href": "https://doi.org/34856479"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Current%20Opinion%20in%20Plant%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "34856479", "name": "item", "description": "34856479", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/34856479"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-12-01T00:00:00Z"}}, {"id": "50|od_______330::f4436e280ea4dbf5c31d9cc8ac41463b", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:26:37Z", "type": "Report", "title": "Global maps of soil temperature", "description": "Research in global change ecology relies heavily on global climatic grids derived from estimates of air temperature in open areas at around 2 m above the ground. These climatic grids do not reflect conditions below vegetation canopies and near the ground surface, where critical ecosystem functions occur and most terrestrial species reside. Here, we provide global maps of soil temperature and bioclimatic variables at a 1-km(2) resolution for 0-5 and 5-15 cm soil depth. These maps were created by calculating the difference (i.e. offset) between in situ soil temperature measurements, based on time series from over 1200 1-km(2) pixels (summarized from 8519 unique temperature sensors) across all the world's major terrestrial biomes, and coarse-grained air temperature estimates from ERA5-Land (an atmospheric reanalysis by the European Centre for Medium-Range Weather Forecasts). We show that mean annual soil temperature differs markedly from the corresponding gridded air temperature, by up to 10 degrees C (mean = 3.0 +/- 2.1 degrees C), with substantial variation across biomes and seasons. Over the year, soils in cold and/or dry biomes are substantially warmer (+3.6 +/- 2.3 degrees C) than gridded air temperature, whereas soils in warm and humid environments are on average slightly cooler (-0.7 +/- 2.3 degrees C). The observed substantial and biome-specific offsets emphasize that the projected impacts of climate and climate change on near-surface biodiversity and ecosystem functioning are inaccurately assessed when air rather than soil temperature is used, especially in cold environments. The global soil-related bioclimatic variables provided here are an important step forward for any application in ecology and related disciplines. Nevertheless, we highlight the need to fill remaining geographic gaps by collecting more in situ measurements of microclimate conditions to further enhance the spatiotemporal resolution of global soil temperature products for ecological applications.", "keywords": ["Technology and Engineering", "soil temperature", "Biology and Life Sciences", "soil-dwelling organisms", "SNOW-COVER", "MITIGATION", "MOISTURE", "FOREST", "weather stations", "LITTER DECOMPOSITION", "PERMAFROST", "near-surface temperatures", "PLANT-RESPONSES", "bioclimatic variables", "CLIMATIC CONTROLS", "Earth and Environmental Sciences", "temperature offset", "SUITABILITY", "global maps", "MICROCLIMATE", "CBCE", "microclimate"]}, "links": [{"href": "https://doi.org/50|od_______330::f4436e280ea4dbf5c31d9cc8ac41463b"}, {"rel": "self", "type": "application/geo+json", "title": "50|od_______330::f4436e280ea4dbf5c31d9cc8ac41463b", "name": "item", "description": "50|od_______330::f4436e280ea4dbf5c31d9cc8ac41463b", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/50|od_______330::f4436e280ea4dbf5c31d9cc8ac41463b"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "PMC9270968", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:28:07Z", "type": "Journal Article", "created": "2022-05-16", "title": "Arabidopsis                     root responses to salinity depend on pectin modification and cell wall sensing", "description": "ABSTRACT                   <p>Owing to its detrimental effect on plant growth, salinity is an increasing worldwide problem for agriculture. To understand the molecular mechanisms activated in response to salt in Arabidopsis thaliana, we investigated the Catharanthus roseus receptor-like kinase 1-like family, which contains sensors that were previously shown to be involved in sensing the structural integrity of the cell walls. We found that herk1 the1-4 double mutants, lacking the function of HERKULES1 (HERK1) and combined with a gain-of-function allele of THESEUS1 (THE1), strongly respond to salt application, resulting in an intense activation of stress responses, similarly to plants lacking FERONIA (FER) function. We report that salt triggers pectin methyl esterase (PME) activation and show its requirement for the activation of several salt-dependent responses. Because chemical inhibition of PMEs alleviates these salt-induced responses, we hypothesize a model in which salt directly leads to cell wall modifications through the activation of PMEs. Responses to salt partly require the functionality of FER alone or HERK1/THE1 to attenuate salt effects, highlighting the complexity of the salt-sensing mechanisms that rely on cell wall integrity.</p", "keywords": ["2. Zero hunger", "Salinity", "Catharanthus roseus", "Arabidopsis Proteins", "Receptor-like kinase 1 like", "Arabidopsis", "15. Life on land", "Pectin modifications", "Cell wall integrity", "Cell Wall", "Gene Expression Regulation", " Plant", "Salt stress responses", "Plant cell wall signaling", "Pectins", "Research Article"]}, "links": [{"href": "https://doi.org/PMC9270968"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "PMC9270968", "name": "item", "description": "PMC9270968", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PMC9270968"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-12-20T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=RESPONSES&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=RESPONSES&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=RESPONSES&", "hreflang": "en-US"}, {"rel": "last", "type": "application/geo+json", "title": "items (last)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=RESPONSES&offset=41", "hreflang": "en-US"}], "numberMatched": 41, "numberReturned": 41, "distributedFeatures": [], "timeStamp": "2026-05-26T13:14:38.692760Z"}