{"type": "FeatureCollection", "features": [{"id": "10.1128/cmr.00196-24", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:56Z", "type": "Journal Article", "created": "2025-07-08", "title": "Schistosomiasis: cercarial finding and recognizing of human hosts as a prerequisite of invasion", "description": "SUMMARY           <p>             Schistosomiasis occurs in 80 primarily tropical and subtropical countries. It is transmitted to humans and animals by             Schistosoma             cercariae during freshwater contact. Parasite stages adapt and switch between molluscs, water, and mammals, where worms sustain parasitism. We reviewed research on larvae encountering humans published in PubMed, Embase, and Web of Science until May 2024. Larvae perform intermittent active/tail-first and passive/body-first swimming with arc-like re-encountering upon host approaches. Skin contacts occur spontaneously or through stimulants.             Schistosoma mansoni             , expressing chemokinesis, lingers in upper-middle warm clear water.             Schistosoma haematobium             , showing negative photo-orientation, remains in upper-lower, cooler, clear-muddy freshwater.             Schistosoma japonicum             stays stimuli-wise non-responsive in shallow muddy habitats. Attachment triggers of             S. mansoni             and             S. haematobium             are amino acids and temperature, respectively.             S. japonicum             adheres at random. Temperature gradient, ceramides, and acylglycerols stimulate the epidermal remaining of             S. mansoni             ; solid hydrophobic surfaces trigger             S. haematobium             and             S. japonicum             . Temperatures of \uffe2\uff89\uffa536\uffc2\uffb0C, \uffe2\uff89\uffa540\uffc2\uffb0C, and 37\uffc2\uffb0C guide             S. mansoni             ,             S. haematobium             , and             S. japonicum             creeping for entering. Permeation aligns with schistosomula transformation by glycocalyx removal, heptalaminate membrane conversion, and tail stripping off and advances mechanically and enzymatically through acetabular glands. Skin and bloodstream navigation follows increasing L-arginine and D-glucose and parasite adjustment ventral-wards. Head gland enzymes facilitate epidermal-dermal transitioning for cutaneous exiting and vasculature accessing. Skin responds with anti-parasitic, anti-inflammatory edematous infiltrations.             Schistosoma             reacts by evasion through hormones, neurotransmitters, enzymes, and specialized proteins, among others. The findings, building largely on             in vitro             experiments, aim to facilitate the development of field-suitable prevention and control measures in support of the World Health Organization 2021\uffe2\uff80\uff932030 Roadmap on Neglected Tropical Diseases.           </p", "keywords": ["Review"], "contacts": [{"organization": "Ursula Panzner, J\u00fcrg Utzinger, Jennifer Keiser,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1128/cmr.00196-24"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Clinical%20Microbiology%20Reviews", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1128/cmr.00196-24", "name": "item", "description": "10.1128/cmr.00196-24", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1128/cmr.00196-24"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-09-11T00:00:00Z"}}, {"id": "10.2166/wh.2019.300", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:21:18Z", "type": "Journal Article", "created": "2019-09-19", "title": "Factors influencing the relationship between fluoride in drinking water and dental fluorosis: a ten-year systematic review and meta-analysis", "description": "Abstract                <p>The relationship between naturally fluoridated groundwater and dental fluorosis has received large attention from researchers around the world. Despite recognition that several factors influence this relationship, there is a lack of systematic studies analyzing the heterogeneity of these results. To fill such a gap, this study performs a systematic review and meta-analysis to understand which factors influence this relationship and how. Selected studies were sampled between 2007 and 2017 from Web of Science, PubMed, Google Scholar and Scopus using keywords and Boolean operators. Results of the systematic review show that dental fluorosis affects individuals of all ages, with the highest prevalence below 11, while the impact of other factors (gender, environmental conditions, diet and dental caries) was inconclusive. Meta-regression analysis, based on information collected through systematic review, indicates that both fluoride in drinking water and temperature influence dental fluorosis significantly and that these studies might be affected by publication bias. Findings show that fluoride negatively affects people's health in less developed countries. The conclusions discuss policy tools and technological innovations that could reduce fluoride levels below that of the World Health Organization (WHO) (&amp;lt;1.5 mg/L).</p>", "keywords": ["fluoride", "Fluorosis", " Dental", "Drinking Water", "Dental Caries", "contaminated drinking water", " dental fluorosis", " fluoride", " meta-analysis", " systematic review", "6. Clean water", "3. Good health", "meta-analysis", "Fluorides", "03 medical and health sciences", "0302 clinical medicine", "systematic review", "Prevalence", "Humans", "dental fluorosis", "Groundwater", "contaminated drinking water"]}, "links": [{"href": "https://centaur.reading.ac.uk/86403/1/Akuno_Nocella_Milai_Gutierrez_2019.pdf"}, {"href": "https://iris.uniss.it/bitstream/11388/228273/1/dental%20fluorosis.pdf"}, {"href": "https://iris.uniss.it/bitstream/11388/228273/5/jwh0170845.pdf"}, {"href": "http://iwaponline.com/jwh/article-pdf/17/6/845/637413/jwh0170845.pdf"}, {"href": "https://doi.org/10.2166/wh.2019.300"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Water%20and%20Health", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2166/wh.2019.300", "name": "item", "description": "10.2166/wh.2019.300", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2166/wh.2019.300"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-09-19T00:00:00Z"}}, {"id": "0b3fed9b6a7790a67cc733e73de3c4d7", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:14:21Z", "type": "Report", "title": "Winters are changing: Snow effects on Arctic and alpine tundra ecosystems", "keywords": ["tundra", "ground temperatures", "ITEX", "13. Climate action", "review", "15. Life on land", "snow experiments"], "contacts": [{"organization": "Rixen, Christian, H\u00f8ye, Toke Thomas, Macek, Petr, Aerts, Rien, Alatalo, Juha, Anderson, Jill T., Arnold, Pieter A., Barrio, Isabel C., Bjerke, Jarle W., Bj\u00f6rkman, Mats P., Blok, Daan, Blume-Werry, Gesche, Boike, Julia, Bokhorst, Stef, Carbognani, Michele, Christiansen, Casper T., Convey, Peter, Cooper, Elisabeth J., Cornelissen, Hans C., Coulson, Stephen J., Dorrepaal, Ellen, Elberling, Bo, Elmendorf, Sarah, Elphinstone, Cassandra, Frei, Esther, Geange, Sonya, Gehrmann, Friederike, Gibson, Casey, Grogan, Paul, Harte, John, Henry, Greg, Inouye, David, Irwin, Rebecca, Jespersen, Gus, J\u00f3nsd\u00f3ttir, Ingibj\u00f6rg Svala, Jung, Ji Young, Klinge, David, Kudo, Gaku, L\u00e4ms\u00e4, Juho, Lee, Hanna, Lembrechts, Jonas, Lett, Signe, Mann, Hjalte Mads, Mastepanov, Mikhail, Morse, Jennifer, Myers-Smith, Isla, Olofsson, Johan, Paavola, Riku, Petraglia, Alessandro, Phoenix, Gareth K., Semenchuk, Philipp, Siewert, Matthias B., Slatyer, Rachel, Spasojevic, Marko, Suding, Katharine, Sullivan, Patrick, Thompson, Kimberly, V\u00e4is\u00e4nen, Maria, Vandvik, Vigdis, Venn, Susanna, Walz, Josefine, Way, Robert, Welker, Jeffrey M., Whittingham Forte, T'ai Gladys, Wipf, Sonja, Zong, Shengwei,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/0b3fed9b6a7790a67cc733e73de3c4d7"}, {"rel": "self", "type": "application/geo+json", "title": "0b3fed9b6a7790a67cc733e73de3c4d7", "name": "item", "description": "0b3fed9b6a7790a67cc733e73de3c4d7", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/0b3fed9b6a7790a67cc733e73de3c4d7"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-09-01T00:00:00Z"}}, {"id": "10.1002/etc.5400", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:14:29Z", "type": "Journal Article", "created": "2022-06-09", "title": "Arbuscular Mycorrhizal Fungi and the Need for a Meaningful Regulatory Plant Protection Product Testing Strategy", "description": "Abstract                <p>Arbuscular mycorrhizal fungi (AMF) perform key soil ecosystem services and, because of their symbiotic relationship with plant roots, may be exposed to the plant protection products (PPPs) applied to soils and crops. In 2017, the European Food Safety Authority (EFSA) released a scientific opinion addressing the state of the science on risk assessment of PPPs for in-soil organisms, recommending the inclusion of AMF ecotoxicological testing in the PPP regulatory process. However, it is not clear how this can be implemented in a tiered, robust, and ecologically relevant manner. Through a critical review of current literature, we examine the recommendations made within the EFSA report and the methodologies available to integrate AMF into the PPP risk assessment and provide perspective and commentary on their agronomic and ecological relevance. We conclude that considerable research questions remain to be addressed prior to the inclusion of AMF into the in-soil organism risk assessment, many of which stem from the unique challenges associated with including an obligate symbiont within the PPP risk assessment. Finally, we highlight critical knowledge gaps and the further research required to enable development of relevant, reliable, and robust scientific tests alongside pragmatic and scientifically sound guidance to ensure that any future risk-assessment paradigm is adequately protective of the ecosystem services it aims to preserve. Environ Toxicol Chem 2022;41:1808\uffe2\uff80\uff931823. \uffc2\uffa9 2022 The Authors. Environmental Toxicology and Chemistry published by Wiley Periodicals LLC on behalf of SETAC.</p", "keywords": ["2. Zero hunger", "Magnoliopsida", "Soil", "13. Climate action", "Mycorrhizae", "Fungi", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Critical Reviews", "Plant Roots", "Ecosystem", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1002/etc.5400"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Toxicology%20and%20Chemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/etc.5400", "name": "item", "description": "10.1002/etc.5400", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/etc.5400"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-06-09T00:00:00Z"}}, {"id": "10.1007/s00114-021-01748-8", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:14:49Z", "type": "Journal Article", "created": "2021-09-07", "title": "Societal importance of Antarctic negative feedbacks on climate change: blue carbon gains from sea ice, ice shelf and glacier losses", "description": "Abstract<p>Diminishing prospects for environmental preservation under climate change are intensifying efforts to boost capture, storage and sequestration (long-term burial) of carbon. However, as Earth\uffe2\uff80\uff99s biological carbon sinks also shrink, remediation has become a key part of the narrative for terrestrial ecosystems. In contrast, blue carbon on polar continental shelves have stronger pathways to sequestration and have increased with climate-forced marine ice losses\uffe2\uff80\uff94becoming the largest known natural negative feedback on climate change. Here we explore the size and complex dynamics of blue carbon gains with spatiotemporal changes in sea ice (60\uffe2\uff80\uff93100 MtCyear\uffe2\uff88\uff921), ice shelves (4\uffe2\uff80\uff9340 MtCyear\uffe2\uff88\uff921\uffe2\uff80\uff89=\uffe2\uff80\uff89giant iceberg generation) and glacier retreat (&lt;\uffe2\uff80\uff891 MtCyear\uffe2\uff88\uff921). Estimates suggest that, amongst these, reduced duration of seasonal sea ice is most important. Decreasing sea ice extent drives longer (not necessarily larger biomass) smaller cell-sized phytoplankton blooms, increasing growth of many primary consumers and benthic carbon storage\uffe2\uff80\uff94where sequestration chances are maximal. However, sea ice losses also create positive feedbacks in shallow waters through increased iceberg movement and scouring of benthos. Unlike loss of sea ice, which enhances existing sinks, ice shelf losses generate brand new carbon sinks both where giant icebergs were, and in their wake. These also generate small positive feedbacks from scouring, minimised by repeat scouring at biodiversity hotspots. Blue carbon change from glacier retreat has been least well quantified, and although emerging fjords are small areas, they have high storage-sequestration conversion efficiencies, whilst blue carbon in polar waters faces many diverse and complex stressors. The identity of these are known (e.g. fishing, warming, ocean acidification, non-indigenous species and plastic pollution) but not their magnitude of impact. In order to mediate multiple stressors, research should focus on wider verification of blue carbon gains, projecting future change, and the broader environmental and economic benefits to safeguard blue carbon ecosystems through law.</p", "keywords": ["0301 basic medicine", "0303 health sciences", "Blue carbon", "Ecologie", "Climate Change", "Sea ice", "Nature-based solutions", "Antarctic Regions", "Review", "Evolution des esp\u00e8ces", "Hydrogen-Ion Concentration", "15. Life on land", "7. Clean energy", "Carbon", "Feedback", "03 medical and health sciences", "13. Climate action", "Blue carbon \u00b7 Ecosystem services \u00b7 Sea ice \u00b7 Nature-based solutions \u00b7 Southern Ocean", "Ecosystem services", "Ice Cover", "Seawater", "14. Life underwater", "Southern Ocean", "Ecosystem"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s00114-021-01748-8.pdf"}, {"href": "https://dipot.ulb.ac.be/dspace/bitstream/2013/332392/3/Barnes2021_Article_SocietalImportanceOfAntarcticN.pdf"}, {"href": "https://doi.org/10.1007/s00114-021-01748-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/The%20Science%20of%20Nature", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00114-021-01748-8", "name": "item", "description": "10.1007/s00114-021-01748-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00114-021-01748-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-07T00:00:00Z"}}, {"id": "10.1007/s00253-012-4173-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:14:50Z", "type": "Journal Article", "created": "2012-06-20", "title": "Pectin-Rich Biomass As Feedstock For Fuel Ethanol Production", "description": "The USA has proposed that 30\u00a0% of liquid transportation fuel be produced from renewable resources by 2030 (Perlack and Stokes 2011). It will be impossible to reach this goal using corn kernel-based ethanol alone. Pectin-rich biomass, an under-utilized waste product of the sugar and juice industry, can augment US ethanol supplies by capitalizing on this already established feedstock. Currently, pectin-rich biomass is sold (at low value) as animal feed. This review focuses on the three most studied types of pectin-rich biomass: sugar beet pulp, citrus waste and apple pomace. Fermentations of these materials have been conducted with a variety of ethanologens, including yeasts and bacteria. Escherichia coli can ferment a wide range of sugars including galacturonic acid, the primary component of pectin. However, the mixed acid metabolism of E. coli can produce unwanted side products. Saccharomyces cerevisiae cannot naturally ferment galacturonic acid nor pentose sugars but has a homoethanol pathway. Erwinia chrysanthemi is capable of degrading many of the cell wall components of pectin-rich materials, including pectin. Klebsiella oxytoca can metabolize a diverse array of sugars including cellobiose, one degradation product of cellulose. However, both E. chrysanthemi and K. oxytoca produce side products during fermentation, similar to E. coli. Using pectin-rich residues from industrial processes is beneficial because the material is already collected and partially pretreated to facilitate enzymatic deconstruction of the plant cell walls. Using biomass already produced for other purposes is an attractive practice because fewer greenhouse gases (GHG) will be anticipated from land-use changes.", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Bacteria", "Ethanol", "Fungi", "Industrial Waste", "Mini-Review", "15. Life on land", "Applied Microbiology and Biotechnology", "7. Clean energy", "12. Responsible consumption", "03 medical and health sciences", "13. Climate action", "Fermentation", "Food Industry", "Pectins", "Biomass", "Biotechnology"], "contacts": [{"organization": "Joy Doran-Peterson, Meredith C. Edwards,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/s00253-012-4173-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Microbiology%20and%20Biotechnology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00253-012-4173-2", "name": "item", "description": "10.1007/s00253-012-4173-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00253-012-4173-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-06-14T00:00:00Z"}}, {"id": "10.1007/s00253-019-09689-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:14:50Z", "type": "Journal Article", "created": "2019-02-20", "title": "Distribution of Oenococcus oeni populations in natural habitats", "description": "Oenococcus oeni is the lactic acid bacteria species most commonly encountered in wine, where it develops after the alcoholic fermentation and achieves the malolactic fermentation that is needed to improve the quality of most wines. O. oeni is abundant in the oenological environment as well as in apple cider and kombucha, whereas it is a minor species in the natural environment. Numerous studies have shown that there is a great diversity of strains in each wine region and in each product or type of wine. Recently, genomic studies have shed new light on the species diversity, population structure, and environmental distribution. They revealed that O. oeni has unique genomic features that have contributed to its fast evolution and adaptation to the enological environment. They have also unveiled the phylogenetic diversity and genomic properties of strains that develop in different regions or different products. This review explores the distribution of O. oeni and the diversity of strains in natural habitats.", "keywords": ["0106 biological sciences", "0301 basic medicine", "570", "Evolution", "[SPI.GPROC] Engineering Sciences [physics]/Chemical and Process Engineering", "590", "Wine", "01 natural sciences", "Domestication", "Evolution", " Molecular", "03 medical and health sciences", "[SDV.IDA]Life Sciences [q-bio]/Food engineering", "MD Multidisciplinary", "[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process Engineering", "Ecosystem", "Oenococcus", "Phylogeny", "0303 health sciences", "Malolactic fermentation", "Genetic Variation", "Genomics", "[SDV.IDA] Life Sciences [q-bio]/Food engineering", "Mini-Review", "Fermentation", "Oenococcus oeni", "Biotechnology"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s00253-019-09689-z.pdf"}, {"href": "https://doi.org/10.1007/s00253-019-09689-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Microbiology%20and%20Biotechnology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00253-019-09689-z", "name": "item", "description": "10.1007/s00253-019-09689-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00253-019-09689-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-02-20T00:00:00Z"}}, {"id": "10.1007/s00253-020-10811-9", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:14:50Z", "type": "Journal Article", "created": "2020-08-13", "title": "Industrial biotechnology of Pseudomonas putida: advances and prospects", "description": "Abstract<p>Pseudomonas putidais a Gram-negative, rod-shaped bacterium that can be encountered in diverse ecological habitats. This ubiquity is traced to its remarkably versatile metabolism, adapted to withstand physicochemical stress, and the capacity to thrive in harsh environments. Owing to these characteristics, there is a growing interest in this microbe for industrial use, and the corresponding research has made rapid progress in recent years. Hereby, strong drivers are the exploitation of cheap renewable feedstocks and waste streams to produce value-added chemicals and the steady progress in genetic strain engineering and systems biology understanding of this bacterium. Here, we summarize the recent advances and prospects in genetic engineering, systems and synthetic biology, and applications ofP. putidaas a cell factory.</p>Key points<p>\uffe2\uff80\uffa2 Pseudomonas putida advances to a global industrial cell factory.</p><p>\uffe2\uff80\uffa2 Novel tools enable system-wide understanding and streamlined genomic engineering.</p><p>\uffe2\uff80\uffa2 Applications of P. putida range from bioeconomy chemicals to biosynthetic drugs.</p>", "keywords": ["0301 basic medicine", "ddc:500", "0303 health sciences", "Pseudomonas putida", "EDEMP cycle", "PHA", "Systems Biology", "500", "Genomics", "Mini-Review", "Bioeconomy", "Bacterial chassis", "Lignin", "03 medical and health sciences", "/dk/atira/pure/sustainabledevelopmentgoals/affordable_and_clean_energy; name=SDG 7 - Affordable and Clean Energy", "Microbial cell factory", "13. Climate action", "Biocatalysis", "Synthetic Biology", "KT2440", "Metabolic engineering", "Biotransformation", "Synthetic biology", "Biotechnology"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s00253-020-10811-9.pdf"}, {"href": "https://doi.org/10.1007/s00253-020-10811-9"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Microbiology%20and%20Biotechnology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00253-020-10811-9", "name": "item", "description": "10.1007/s00253-020-10811-9", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00253-020-10811-9"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-08-13T00:00:00Z"}}, {"id": "10.1007/s00604-025-07267-x", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:15:03Z", "type": "Journal Article", "created": "2025-06-26", "title": "Future perspectives of GMO detection in agriculture: strategies for electrochemical nucleic acid detection", "description": "The uncontrolled distribution of genetically modified organisms\u00a0(GMO)-based food and feed is an increasing global concern, primarily due to limited information about their potential harmful effects. The growing diversity and complexity of GMOs present significant challenges for their detection, traceability, and safety monitoring. Traditionally, GMOs are detected using molecular methods, among which PCR methods are the most explored and are considered the gold standard. However, isothermal nucleic acid amplification methods, though less explored, hold great potential, especially when integrated with biosensor platforms, enabling the development of highly efficient and versatile biosensing systems. This paper provides a comprehensive overview of the recent advances in biosensors utilizing methods of isothermal nucleic acid amplification, highlighting their current progress and future perspectives. We discuss molecular methods for GMO detection, focusing on reaction conditions, amplification efficiency, and compatibility with various detection modalities. Additionally, we investigate the integration of various nanomaterials into transducers, such as electrochemical platforms, together with the electrochemical techniques and detection mechanisms, aiming to outline their synergistic effects with molecular techniques to improve detection sensitivity and enable real-time monitoring. Furthermore, we discuss the applications of GMO biosensors across diverse fields, including food safety and environmental monitoring, while addressing existing challenges and potential strategies for improving the performance, robustness, and practicality of biosensing platforms. Overall, this review highlights the significant progress achieved in GMO biosensors and underscores their promising role in advancing diagnostic and monitoring capabilities. GRAPHICAL ABSTRACT: [Image: see text]", "keywords": ["Review"]}, "links": [{"href": "https://doi.org/10.1007/s00604-025-07267-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Microchimica%20Acta", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00604-025-07267-x", "name": "item", "description": "10.1007/s00604-025-07267-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00604-025-07267-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-06-26T00:00:00Z"}}, {"id": "10.1007/s11104-023-06301-2", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:34Z", "type": "Journal Article", "created": "2023-10-04", "title": "Root phenotypes for improved nitrogen capture", "description": "Abstract               Background               <p>Suboptimal nitrogen availability is a primary constraint for crop production in low-input agroecosystems, while nitrogen fertilization is a primary contributor to the energy, economic, and environmental costs of crop production in high-input agroecosystems. In this article we consider avenues to develop crops with improved nitrogen capture and reduced requirement for nitrogen fertilizer.</p>                            Scope               <p>Intraspecific variation for an array of root phenotypes has been associated with improved nitrogen capture in cereal crops, including architectural phenotypes that colocalize root foraging with nitrogen availability in the soil; anatomical phenotypes that reduce the metabolic costs of soil exploration, improve penetration of hard soil, and exploit the rhizosphere; subcellular phenotypes that reduce the nitrogen requirement of plant tissue; molecular phenotypes exhibiting optimized nitrate uptake kinetics; and rhizosphere phenotypes that optimize associations with the rhizosphere microbiome. For each of these topics we provide examples of root phenotypes which merit attention as potential selection targets for crop improvement. Several cross-cutting issues are addressed including the importance of soil hydrology and impedance, phenotypic plasticity, integrated phenotypes, in silico modeling, and breeding strategies using high throughput phenotyping for co-optimization of multiple phenes.</p>                            Conclusions               <p>Substantial phenotypic variation exists in crop germplasm for an array of root phenotypes that improve nitrogen capture. Although this topic merits greater research attention than it currently receives, we have adequate understanding and tools to develop crops with improved nitrogen capture. Root phenotypes are underutilized yet attractive breeding targets for the development of the nitrogen efficient crops urgently needed in global agriculture.</p>", "keywords": ["2. Zero hunger", "0106 biological sciences", "0301 basic medicine", "Plasticity", "Marschner Review", "Nitrogen", "Physiology", "Nitrogen; Root; Anatomy; Architecture; Soil; Crop breeding; Root phenotyping; Modeling; Rhizosphere; Plasticity; Physiology", "Modeling", "Root phenotyping", "15. Life on land", "01 natural sciences", "Soil", "03 medical and health sciences", "Root", "FOS: Biological sciences", "Architecture", "Rhizosphere", "Crop breeding", "Anatomy", "FOS: Civil engineering"]}, "links": [{"href": "https://doi.org/10.1007/s11104-023-06301-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-023-06301-2", "name": "item", "description": "10.1007/s11104-023-06301-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-023-06301-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-10-04T00:00:00Z"}}, {"id": "10.1007/s11104-022-05508-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:34Z", "type": "Journal Article", "created": "2022-06-22", "title": "Harnessing belowground processes for sustainable intensification of agricultural systems", "description": "Abstract <p>Increasing food demand coupled with climate change pose a great challenge to agricultural systems. In this review we summarize recent advances in our knowledge of how plants, together with their associated microbiota, shape rhizosphere processes. We address (molecular) mechanisms operating at the plant\uffe2\uff80\uff93microbe-soil interface and aim to link this knowledge with actual and potential avenues for intensifying agricultural systems, while at the same time reducing irrigation water, fertilizer inputs and pesticide use. Combining in-depth knowledge about above and belowground plant traits will not only significantly advance our mechanistic understanding of involved processes but also allow for more informed decisions regarding agricultural practices and plant breeding. Including belowground plant-soil-microbe interactions in our breeding efforts will help to select crops resilient to abiotic and biotic environmental stresses and ultimately enable us to produce sufficient food in a more sustainable agriculture in the upcoming decades.</p", "keywords": ["0301 basic medicine", "BIOLOGICAL NITRIFICATION INHIBITION", "PHOSPHATE SOLUBILIZING BACTERIA", "Plant-plant interaction", "Rhizobiome", "MEDIATED PH CHANGES", "Review Article", "Plant health", "MEMBRANE H+-ATPASE", "12. Responsible consumption", "03 medical and health sciences", "Soil health", "Soil structure", "C sequestration", "SDG 13 - Climate Action", "SDG 2 \u2013 Kein Hunger", "106026 Ecosystem research", "Plant nutrition", "SDG 2 - Zero Hunger", "2. Zero hunger", "0303 health sciences", "Water availability", "Root exudation", "JASMONIC ACID", "15. Life on land", "Microbes", "Intercropping", "106026 \u00d6kosystemforschung", "PLANT-GROWTH", "13. Climate action", "ROOT BORDER CELLS", "SDG 13 \u2013 Ma\u00dfnahmen zum Klimaschutz", "C cycling", "INNATE IMMUNITY", "NITROGEN-FIXATION", "ORGANIC-ACIDS"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s11104-022-05508-z.pdf"}, {"href": "https://doi.org/10.1007/s11104-022-05508-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-022-05508-z", "name": "item", "description": "10.1007/s11104-022-05508-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-022-05508-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-06-22T00:00:00Z"}}, {"id": "10.1007/s13280-016-0836-z", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:44Z", "type": "Journal Article", "created": "2016-11-17", "title": "The impact of swidden decline on livelihoods and ecosystem services in Southeast Asia: A review of the evidence from 1990 to 2015", "description": "Open AccessEl cambio econ\u00f3mico global y las intervenciones pol\u00edticas est\u00e1n impulsando las transiciones de los sistemas de golondrina larga (EPA) a usos alternativos de la tierra en las tierras altas del sudeste asi\u00e1tico. Este estudio presenta una revisi\u00f3n sistem\u00e1tica de c\u00f3mo estas transiciones impactan en los medios de vida y los servicios ecosist\u00e9micos en la regi\u00f3n. M\u00e1s de 17 000 estudios publicados entre 1950 y 2015 se redujeron, en funci\u00f3n de la relevancia y la calidad, a 93 estudios para su posterior an\u00e1lisis. Nuestro an\u00e1lisis de las transiciones del uso de la tierra de los sistemas de cultivo sucios a los intensificados mostr\u00f3 varios resultados: m\u00e1s hogares hab\u00edan aumentado los ingresos generales, pero estos beneficios tuvieron un costo significativo, como la reducci\u00f3n de las pr\u00e1cticas consuetudinarias, el bienestar socioecon\u00f3mico, las opciones de medios de vida y los rendimientos de los productos b\u00e1sicos. El examen de los efectos de las transiciones en las propiedades del suelo revel\u00f3 impactos negativos en el carbono org\u00e1nico del suelo, la capacidad de intercambio cati\u00f3nico y el carbono sobre el suelo. En conjunto, los impulsores inmediatos y subyacentes de las transiciones de la EPA a los usos alternativos de la tierra, especialmente la intensificaci\u00f3n de los cultivos comerciales perennes y anuales, condujeron a disminuciones significativas en la seguridad de los medios de vida preexistentes y los servicios ecosist\u00e9micos que respaldan esta seguridad. Nuestros resultados sugieren que las pol\u00edticas que imponen transiciones en el uso de la tierra a los agricultores de las tierras altas para mejorar los medios de vida y los entornos han sido err\u00f3neas; en el contexto de los diversos usos de la tierra, la agricultura sucia puede apoyar los medios de vida y los servicios ecosist\u00e9micos que ayudar\u00e1n a amortiguar los impactos del cambio clim\u00e1tico en el sudeste asi\u00e1tico.", "keywords": ["Economics", "Cropping", "Geography", " Planning and Development", "0211 other engineering and technologies", "Optimal Operation of Water Resources Systems", "Review", "02 engineering and technology", "livelihoods", "910", "630", "Agricultural and Biological Sciences", "land-use change", "Livelihood", "Engineering", "Context (archaeology)", "Natural resource economics", "11. Sustainability", "Business", "Asia", " Southeastern", "2. Zero hunger", "Global and Planetary Change", "Payments for Ecosystem Services", "Geography", "Ecology", "1. No poverty", "Life Sciences", "Agriculture", "Southeast Asia", "swidden agriculture", "Land Tenure and Property Rights in Agriculture", "Programming language", "Archaeology", "2304 Environmental Chemistry", "Physical Sciences", "Conservation of Natural Resources", "330", "Climate Change", "Soil Science", "Ocean Engineering", "Environmental science", "Livelihood security", "Environmental Chemistry", "Ecosystem services", "Alternative land uses", "Agroforestry", "Biology", "Land use", " land-use change and forestry", "Ecosystem", "Planning and Development", "3305 Geography", "land use", "Food security", "15. Life on land", "shifting cultivation", "Computer science", "Deforestation (computer science)", "13. Climate action", "FOS: Biological sciences", "Environmental Science", "Land use", "Shifting cultivation", "ecosystem services", "Drivers and Impacts of Tropical Deforestation", "2303 Ecology"]}, "links": [{"href": "https://openresearch-repository.anu.edu.au/bitstream/1885/248831/3/01_Dressler_The_impact_of_swidden_decline_2017.pdf.jpg"}, {"href": "https://doi.org/10.1007/s13280-016-0836-z"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ambio", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s13280-016-0836-z", "name": "item", "description": "10.1007/s13280-016-0836-z", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s13280-016-0836-z"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-11-16T00:00:00Z"}}, {"id": "10.1007/s40265-021-01505-1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:46Z", "type": "Journal Article", "created": "2021-04-30", "title": "Preclinical and Clinical Characteristics of the Trichuricidal Drug Oxantel Pamoate and Clinical Development Plans: A Review", "description": "Soil-transmitted helminths (Ascaris lumbricoides, hookworm and Trichuris trichiura) infect about one-fifth of the world's population. The currently available drugs are all highly efficacious against A. lumbricoides. However, they are only moderately efficacious against hookworm and poorly efficacious against T. trichiura. Oxantel, a tetrahydropyrimidine derivative discovered in the 1970s, has recently been brought back to our attention given its high efficacy against T. trichiura infections (estimated 76% cure rate and 85% egg reduction rate at a 20 mg/kg dose). This review summarizes the current knowledge on oxantel pamoate and its use against T. trichiura infections in humans. Oxantel pamoate acts locally in the human gastrointestinal tract and binds to the parasite's nicotinic acetylcholine receptor (nAChR), leading to a spastic paralysis of the worm and subsequent expulsion. The drug is metabolically stable, shows low permeability and low systemic bioavailability after oral use. Oxantel pamoate was found to be safe in humans, with only a few mild adverse events reported. Several clinical trials have investigated the efficacy of this drug against T. trichiura\u00a0and suggest that oxantel pamoate is more efficacious against T. trichiura than the currently recommended drugs, which makes it a strong asset to the depleted drug armamentarium and could help delay or even prevent the development of resistance to existing drugs. We highlight existing data to support the use of oxantel pamoate against T. trichiura infections.", "keywords": ["Hookworm Infections", "03 medical and health sciences", "Trichuris", "0302 clinical medicine", "Dose-Response Relationship", " Drug", "Antinematodal Agents", "Pyrantel Pamoate", "Animals", "Humans", "Drug Interactions", "Review Article", "3. Good health"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1007/s40265-021-01505-1.pdf"}, {"href": "https://doi.org/10.1007/s40265-021-01505-1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Drugs", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s40265-021-01505-1", "name": "item", "description": "10.1007/s40265-021-01505-1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s40265-021-01505-1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-30T00:00:00Z"}}, {"id": "11104/0369608", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:26:06Z", "type": "Journal Article", "created": "2025-09-01", "title": "Impacts of Climate Change Interventions on Biodiversity, Water, the Food System and Human Health and Well\u2010Being", "description": "ABSTRACT<p>Climate change threatens biodiversity, water, food and human health and well\uffe2\uff80\uff90being. Rapid, sustained mitigation and adaptation actions can benefit all these elements of the nexus. Key transitions in energy, land and marine ecosystems, urban areas, industry and society are essential for climate change mitigation, adaptation and sustainable development. These transitions require interdisciplinary research, policy support and societal engagement. Here we present an assessment of 69 response options, a subset of which (15) was used in the climate change chapter of the IPBES Nexus Assessment. We show that the majority of climate change response options for land, oceans and ecosystems, settlement and infrastructure, industrial and societal system transitions have broadly positive impacts across the nexus. However, energy system transitions show more apparent trade\uffe2\uff80\uff90offs. Most of these impacts result from energy infrastructure that would also be required for fossil fuel\uffe2\uff80\uff90based systems and should be compared to the far more damaging consequences of continued fossil fuel use. Transitioning to cleaner, renewable energy sources reduces these risks and offers significant improvements across the nexus by reducing climate change impacts. Of the 69 response options assessed, 59% have entirely positive effects, or at least no negative effects, across all nexus elements and can be considered as low\uffe2\uff80\uff90risk, immediately actionable options. The remaining 41% show either negative or variable impacts on at least one nexus element. However, this does not render them unviable; rather, their implementation must be carefully managed. Where impacts are variable, strategies should be tailored to ensure positive outcomes; where trade\uffe2\uff80\uff90offs are unavoidable, efforts should focus on minimising negative effects and maximising synergies. Our findings suggest that prioritising policies that address the interconnected challenges of climate change, biodiversity loss, land degradation, pollution, food insecurity, access to clean water, energy for all and sustainable development will deliver more effective and equitable climate action.</p", "keywords": ["Gcb Review", "food", "water", "synergy", "Biodiversity", "Trade\u2010off; water", "Synergy", "climate change", "Food", "human health and well-being", "Human health and well\u2010being", "Climate change", "IPBES", "biodiversity", "Nexus", "trade-off"]}, "links": [{"href": "https://doi.org/11104/0369608"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11104/0369608", "name": "item", "description": "11104/0369608", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11104/0369608"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-09-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2018.05.028", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:15:59Z", "type": "Journal Article", "created": "2018-05-31", "title": "Effects of agricultural management practices on soil quality: A review of long-term experiments for Europe and China", "description": "Open AccessIn this paper we present effects of four paired agricultural management practices (organic matter (OM) addition versus no organic matter input, no-tillage (NT) versus conventional tillage, crop rotation versus monoculture, and organic agriculture versus conventional agriculture) on five key soil quality indicators, i.e., soil organic matter (SOM) content, pH, aggregate stability, earthworms (numbers) and crop yield. We have considered organic matter addition, no-tillage, crop rotation and organic agriculture as 'promising practices'; no organic matter input, conventional tillage, monoculture and conventional farming were taken as the respective references or 'standard practice' (baseline). Relative effects were analysed through indicator response ratio (RR) under each paired practice. For this we considered data of 30 long-term experiments collected from 13 case study sites in Europe and China as collated in the framework of the EU-China funded iSQAPER project. These were complemented with data from 42 long-term experiments across China and 402 observations of long-term trials published in the literature. Out of these, we only considered experiments covering at least five years. The results show that OM addition favourably affected all the indicators under consideration. The most favourable effect was reported on earthworm numbers, followed by yield, SOM content and soil aggregate stability. For pH, effects depended on soil type; OM input favourably affected the pH of acidic soils, whereas no clear trend was observed under NT. NT generally led to increased aggregate stability and greater SOM content in upper soil horizons. However, the magnitude of the relative effects varied, e.g. with soil texture. No-tillage practices enhanced earthworm populations, but not where herbicides or pesticides were applied to combat weeds and pests. Overall, in this review, yield slightly decreased under NT. Crop rotation had a positive effect on SOM content and yield; rotation with ley very positively influenced earthworms' numbers. Overall, crop rotation had little impact on soil pH and aggregate stability \u2212 depending on the type of intercrop; alternatively, rotation of arable crops only resulted in adverse effects. A clear positive trend was observed for earthworm abundance under organic agriculture. Further, organic agriculture generally resulted in increased aggregate stability and greater SOM content. Overall, no clear trend was found for pH; a decrease in yield was observed under organic agriculture in this review.", "keywords": ["China", "Soil Science", "Organic chemistry", "Crop", "01 natural sciences", "Long-term field experiments", "Crop Productivity", "Soil quality", "Environmental science", "Organic Matter Dynamics", "Tillage", "Agricultural and Biological Sciences", "Soil quality indicators", "Crop rotation", "Management of Soil Fertility and Crop Productivity", "Soil water", "FOS: Mathematics", "Agricultural management practices", "Monoculture", "Crop Yield Stability", "Biology", "0105 earth and related environmental sciences", "Literature review", "Response ratio", "Soil science", "2. Zero hunger", "Soil organic matter", "Soil Fertility", "Conventional tillage", "Geography", "Life Sciences", "Agriculture", "04 agricultural and veterinary sciences", "Soil Nutrient Management", "15. Life on land", "Agronomy", "Europe", "Chemistry", "Archaeology", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Crop husbandry", "Organic matter", "Intercropping in Agricultural Systems", "Soil Carbon Dynamics and Nutrient Cycling in Ecosystems", "Agronomy and Crop Science", "Mathematics"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2018.05.028"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2018.05.028", "name": "item", "description": "10.1016/j.agee.2018.05.028", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2018.05.028"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-10-01T00:00:00Z"}}, {"id": "10.1016/j.agee.2021.107551", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:15:59Z", "type": "Journal Article", "created": "2021-07-06", "title": "Impacts of agronomic measures on crop, soil, and environmental indicators: A review and synthesis of meta-analysis", "description": "Abstract   Sustainable agricultural management implies optimization of resources for crop production while minimizing adverse impacts on the environment. This requires a better understanding of the synergies and trade-offs of agronomic management while accounting for the controlling effects of site-specific factors (covariates). We systematically evaluated 113 meta-analytical studies assessing impacts of crop management measures (rotation, cover cropping, residue retention), soil and water measures (irrigation, tillage), soil amendments (enhanced efficiency, biochar), fertilizer use (organic, mineral, combined organic-mineral) and \u201c4R'\u201d fertilizer strategies (right source, rate, timing, placement) on sustainability indicators. These indicators include crop yield, crop N and P (content, uptake, and use efficiency), soil quality indicators (soil organic C, N and P contents, compaction), soil emissions of ammonia (NH3) and greenhouse gases (CO2, N2O), and nutrient losses to water (N and P surplus or leaching). Nutrient management, including 4R practices as well as enhanced efficiency amendments, had the largest impact, increasing crop yields and N uptake while reducing N2O and NH3 emissions as well as N surplus, whereas effects on CO2 emissions were variable. Although all measures positively impacted soil C, the largest effect was due to biochar, followed by organic fertilizer input. Biochar positively impacted crop yield, diminished N2O and NH3 emissions as well as N surplus, and increased CO2 emissions. Within crop management, only cover cropping had a significant positive effect on crop yield, while both cover crops and rotation slightly enhanced N uptake and the sequestration of C and N in soil, thus reducing N2O emissions and N surplus. Minimal tillage practices generally increased SOC, while results for crop yield, N surplus and N2O emissions were variable. Site-specific factors had substantial impacts on the evaluated impacts of measures, most importantly climate, crop type, soil texture, soil pH, soil organic C, N dose, and experimental duration. Considering the variation among meta-analytical protocols followed, we recommend that field studies and meta-analytical work adhere to harmonized guidelines with respect to the reporting of site-level data, experimental design, and the statistical procedures used. This will ensure data comparability between studies, improve the quality of meta-analysis results, and give better insights into currently uncertain or unknown impacts of agronomic measures.", "keywords": ["0301 basic medicine", "2. Zero hunger", "Soil organic carbon", "Management practices", "Agronomic indicators", "Review", "04 agricultural and veterinary sciences", "15. Life on land", "12. Responsible consumption", "Meta-analysis", "03 medical and health sciences", "Emissions", "13. Climate action", "Nutrient use efficiency", "0401 agriculture", " forestry", " and fisheries", "Crop yield", "Nutrient surplus"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2021.107551"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2021.107551", "name": "item", "description": "10.1016/j.agee.2021.107551", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2021.107551"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-10-01T00:00:00Z"}}, {"id": "10.1016/j.agrformet.2007.08.011", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:16:00Z", "type": "Journal Article", "created": "2007-09-26", "title": "Comprehensive Comparison Of Gap-Filling Techniques For Eddy Covariance Net Carbon Fluxes", "description": "Abstract   We review 15 techniques for estimating missing values of net ecosystem CO 2  exchange (NEE) in eddy covariance time series and evaluate their performance for different artificial gap scenarios based on a set of 10 benchmark datasets from six forested sites in Europe.  The goal of gap filling is the reproduction of the NEE time series and hence this present work focuses on estimating missing NEE values, not on editing or the removal of suspect values in these time series due to systematic errors in the measurements (e.g., nighttime flux, advection). The gap filling was examined by generating 50 secondary datasets with artificial gaps (ranging in length from single half-hours to 12 consecutive days) for each benchmark dataset and evaluating the performance with a variety of statistical metrics. The performance of the gap filling varied among sites and depended on the level of aggregation (native half-hourly time step versus daily), long gaps were more difficult to fill than short gaps, and differences among the techniques were more pronounced during the day than at night.  The non-linear regression techniques (NLRs), the look-up table (LUT), marginal distribution sampling (MDS), and the semi-parametric model (SPM) generally showed good overall performance. The artificial neural network based techniques (ANNs) were generally, if only slightly, superior to the other techniques. The simple interpolation technique of mean diurnal variation (MDV) showed a moderate but consistent performance. Several sophisticated techniques, the dual unscented Kalman filter (UKF), the multiple imputation method (MIM), the terrestrial biosphere model (BETHY), but also one of the ANNs and one of the NLRs showed high biases which resulted in a low reliability of the annual sums, indicating that additional development might be needed. An uncertainty analysis comparing the estimated random error in the 10 benchmark datasets with the artificial gap residuals suggested that the techniques are already at or very close to the noise limit of the measurements. Based on the techniques and site data examined here, the effect of gap filling on the annual sums of NEE is modest, with most techniques falling within a range of \u00b125\u00a0g\u00a0C\u00a0m \u22122 \u00a0year \u22121 .", "keywords": ["Net ecosystem exchange (NEE)", "Gap-filling comparison", "550", "FLUXNET", "0207 environmental engineering", "Eddy covariance", "02 engineering and technology", "01 natural sciences", "630", "Carbon flux", "Review of gap-filling techniques", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.agrformet.2007.08.011"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Forest%20Meteorology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agrformet.2007.08.011", "name": "item", "description": "10.1016/j.agrformet.2007.08.011", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agrformet.2007.08.011"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-12-01T00:00:00Z"}}, {"id": "10.1016/j.cageo.2022.105194", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:16:17Z", "type": "Journal Article", "created": "2022-08-02", "title": "Improving the documentation and findability of data services and repositories: A review of (meta)data management approaches", "description": "This scientific review paper aims at challenging a common point of view on metadata as a necessary evil and<br> something mandatory to the data creating and dataset publishing process. Metadata are instead presented as a crucial element to ensure the findability of data services and repositories. This paper describes a way through four levels of metadata management and publication, from default unstructured data, through schema-based metadata with literal values and/or URIs, towards linked open (meta)data providing explicit linkage between reliable data resources. Such research was conducted within the European Union\u2019s project PoliVisu. Special attention is given to the following: (1) guidance on publication aimed at the broad audience of search engine users and (2) the publication of geo (meta)data not only via standard technologies, such as the OGC Catalogue Service for Web and open data portals, but also through leading search engines (that are Schema.org-based).", "keywords": ["Metadata review", "Open linked data", "Open linked metadata", "Geodata", "Findability", "Search engines", "05 social sciences", "0202 electrical engineering", " electronic engineering", " information engineering", "02 engineering and technology", "0509 other social sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.cageo.2022.105194"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Computers%20%26amp%3B%20Geosciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.cageo.2022.105194", "name": "item", "description": "10.1016/j.cageo.2022.105194", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.cageo.2022.105194"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-12-01T00:00:00Z"}}, {"id": "10.1016/j.csbj.2021.04.023", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:16:24Z", "type": "Journal Article", "created": "2021-04-19", "title": "ADP-ribosylation systems in bacteria and viruses", "description": "ADP-ribosylation is an ancient posttranslational modification present in all kingdoms of life. The system likely originated in bacteria where it functions in inter- and intra-species conflict, stress response and pathogenicity. It was repeatedly adopted via lateral transfer by eukaryotes, including humans, where it has a pivotal role in epigenetics, DNA-damage repair, apoptosis, and other crucial pathways including the immune response to pathogenic bacteria and viruses. In other words, the same ammunition used by pathogens is adapted by eukaryotes to fight back. While we know quite a lot about the eukaryotic system, expanding rather patchy knowledge on bacterial and viral ADP-ribosylation would give us not only a better understanding of the system as a whole but a fighting advantage in this constant arms race. By writing this review we hope to put into focus the available information and give a perspective on how this system works and can be exploited in the search for therapeutic targets in the future. The relevance of the subject is especially highlighted by the current situation of being amid the world pandemic caused by a virus harbouring and dependent on a representative of such a system.", "keywords": ["0301 basic medicine", "0303 health sciences", "ADP-ribosylation ; ADP-ribosyl transferase ; ADP-ribosyl hydrolase ; PARP ; PARG ; Macrodomain ; Toxin-antitoxin system", "ADP-ribosyl transferase", "Toxin-antitoxin system", "Review Article", "ADP-ribosyl hydrolase", "PARP", " PARG", "PARP", "3. Good health", "03 medical and health sciences", "PARG", "Biology", "TP248.13-248.65", "ADP-ribosylation", "Macrodomain", "Biotechnology"], "contacts": [{"organization": "Mikol\u010devi\u0107, Petra, Hlou\u0161ek-Kasun, Andrea, Ahel, Ivan, Miko\u010d, Andreja,", "roles": ["creator"]}]}, "links": [{"href": "http://fulir.irb.hr/6483/1/MikolcevicP_ADP-ribosylation_CSBJ19_2021_%202366.pdf"}, {"href": "https://doi.org/10.1016/j.csbj.2021.04.023"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Computational%20and%20Structural%20Biotechnology%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.csbj.2021.04.023", "name": "item", "description": "10.1016/j.csbj.2021.04.023", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.csbj.2021.04.023"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "20.500.11850/636573", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:26:39Z", "type": "Journal Article", "created": "2023-10-04", "title": "Root phenotypes for improved nitrogen capture", "description": "Abstract               Background               <p>Suboptimal nitrogen availability is a primary constraint for crop production in low-input agroecosystems, while nitrogen fertilization is a primary contributor to the energy, economic, and environmental costs of crop production in high-input agroecosystems. In this article we consider avenues to develop crops with improved nitrogen capture and reduced requirement for nitrogen fertilizer.</p>                            Scope               <p>Intraspecific variation for an array of root phenotypes has been associated with improved nitrogen capture in cereal crops, including architectural phenotypes that colocalize root foraging with nitrogen availability in the soil; anatomical phenotypes that reduce the metabolic costs of soil exploration, improve penetration of hard soil, and exploit the rhizosphere; subcellular phenotypes that reduce the nitrogen requirement of plant tissue; molecular phenotypes exhibiting optimized nitrate uptake kinetics; and rhizosphere phenotypes that optimize associations with the rhizosphere microbiome. For each of these topics we provide examples of root phenotypes which merit attention as potential selection targets for crop improvement. Several cross-cutting issues are addressed including the importance of soil hydrology and impedance, phenotypic plasticity, integrated phenotypes, in silico modeling, and breeding strategies using high throughput phenotyping for co-optimization of multiple phenes.</p>                            Conclusions               <p>Substantial phenotypic variation exists in crop germplasm for an array of root phenotypes that improve nitrogen capture. Although this topic merits greater research attention than it currently receives, we have adequate understanding and tools to develop crops with improved nitrogen capture. Root phenotypes are underutilized yet attractive breeding targets for the development of the nitrogen efficient crops urgently needed in global agriculture.</p>", "keywords": ["2. Zero hunger", "0106 biological sciences", "0301 basic medicine", "Plasticity", "Marschner Review", "Nitrogen", "Physiology", "Nitrogen; Root; Anatomy; Architecture; Soil; Crop breeding; Root phenotyping; Modeling; Rhizosphere; Plasticity; Physiology", "Modeling", "Root phenotyping", "15. Life on land", "01 natural sciences", "Soil", "03 medical and health sciences", "Root", "FOS: Biological sciences", "Architecture", "Rhizosphere", "Crop breeding", "Anatomy", "FOS: Civil engineering"]}, "links": [{"href": "https://doi.org/20.500.11850/636573"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "20.500.11850/636573", "name": "item", "description": "20.500.11850/636573", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/20.500.11850/636573"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-10-04T00:00:00Z"}}, {"id": "10.1016/j.heliyon.2023.e16692", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:16:59Z", "type": "Journal Article", "created": "2023-05-27", "title": "Past, present and future trends in the remediation of heavy-metal contaminated soil - Remediation techniques applied in real soil-contamination events", "description": "Most worldwide policy frameworks, including the United Nations Sustainable Development Goals, highlight soil as a key non-renewable natural resource which should be rigorously preserved to achieve long-term global sustainability. Although some soil is naturally enriched with heavy metals (HMs), a series of anthropogenic activities are known to contribute to their redistribution, which may entail potentially harmful environmental and/or human health effects if certain concentrations are exceeded. If this occurs, the implementation of rehabilitation strategies is highly recommended. Although there are many publications dealing with the elimination of HMs using different methodologies, most of those works have been done in laboratories and there are not many comprehensive reviews about the results obtained under field conditions. Throughout this review, we examine the different methodologies that have been used in real scenarios and, based on representative case studies, we present the evolution and outcomes of the remediation strategies applied in real soil-contamination events where legacies of past metal mining activities or mine spills have posed a serious threat for soil conservation. So far, the best efficiencies at field-scale have been reported when using combined strategies such as physical containment and assisted-phytoremediation. We have also introduced the emerging problem of the heavy metal contamination of agricultural soils and the different strategies implemented to tackle this problem. Although remediation techniques used in real scenarios have not changed much in the last decades, there are also encouraging facts for the advances in this field. Thus, a growing number of mining companies publicise in their webpages their soil remediation strategies and efforts; moreover, the number of scientific publications about innovative highly-efficient and environmental-friendly methods is also increasing. In any case, better cooperation between scientists and other soil-related stakeholders is still required to improve remediation performance.", "keywords": ["2. Zero hunger", "H1-99", "(Bio)mining", "Science (General)", "Spills", "Remediation", "Review Article", "15. Life on land", "6. Clean water", "(bio)mining", "12. Responsible consumption", "3. Good health", "Social sciences (General)", "Q1-390", "Soil", "Sustainability", "13. Climate action", "11. Sustainability", "Heavy-metal"]}, "links": [{"href": "https://doi.org/10.1016/j.heliyon.2023.e16692"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Heliyon", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.heliyon.2023.e16692", "name": "item", "description": "10.1016/j.heliyon.2023.e16692", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.heliyon.2023.e16692"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-06-01T00:00:00Z"}}, {"id": "10.1016/j.isci.2024.109042", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:17:00Z", "type": "Journal Article", "created": "2024-01-26", "title": "Global N2O emissions from our planet: Which fluxes are affected by man, and can we reduce these?", "description": "In some places, N2O emissions have doubled during the last 2-3 decades. Therefore, it is crucial to identify N2O emission hotspots from terrestrial and aquatic systems. Large variation in N2O emissions occur in managed as well as in natural areas. Natural unmanaged tropical and subtropical wet forests are important N2O sources globally. Emission hotspots, often coupled to human activities, vary across climate zones, whereas N2O emissions are most often a few kg N ha-1 year-1 from arable soils, drained organic soils in the boreal and temperate zones often release 20-30\u00a0kg N ha-1 year-1. Similar high N2O emissions occur from some tropical crops like tea, palm oil and bamboo. This strong link between increased N2O emissions and human activities highlight the potential to mitigate large emissions. In contrast, water where oxic and anoxic conditions meet are N2O emission hotspots as well, but not possible to reduce.", "keywords": ["13. Climate action", "Science", "Q", "11. Sustainability", "Environmental geochemistry", "Review", "Biogeochemistry", "15. Life on land", "Microbiology", "7. Clean energy", "6. Clean water"], "contacts": [{"organization": "Christensen, S\u00f8ren, Rousk, Kathrin,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.isci.2024.109042"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/iScience", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.isci.2024.109042", "name": "item", "description": "10.1016/j.isci.2024.109042", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.isci.2024.109042"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-02-01T00:00:00Z"}}, {"id": "10.1016/j.foreco.2018.11.033", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:16:50Z", "type": "Journal Article", "created": "2018-11-29", "title": "Impacts of forests and forestation on hydrological services in the Andes: A systematic review", "description": "Abstract   Several Andean countries have planned to restore forest cover in degraded land to enhance the provision of multiple ecosystem services in response to international commitments such as the Bonn Challenge. Hydrological services, e.g. water supply, hydrological regulation and erosion mitigation, are particularly important to sustain the life of more than fifty million Andean people. While rapid and important forest cover changes have occurred during recent decades, critical information on the impact of forestation on hydrological services has not yet been synthesized in the context of Andean ecosystems. We define forestation as the establishment of forest by plantation or natural regeneration on areas that either had forest in the past or not. To help improve decision-making on forestation in the Andes, we reviewed the available literature concerning the impacts of forestation on water supply, hydrological regulation and mitigation of erosion and landslides. We also examined available data on the most relevant hydrological processes such as infiltration, evapotranspiration and runoff in forest stands. Hydrological services from native forests were also included as a reference state for comparing processes and services provided by forestation. Following systematic review protocols, we synthesized 155 studies using different methods, including meta-analyses and meta-regressions. Results show that forestation has had clear impacts on degraded soils, through reducing water erosion of soils and risk of moderate floods, increasing soil infiltration rate by 8 and topsoil organic matter (SOM). We found that 20\u202fyears of tree plantation was sufficient to recover infiltration rate and sediment yield close to the levels of native forests whereas SOM, soil water storage and surface runoff of native forests could not be recovered by forestation in the time scales examined. The benefits in terms of hydrological regulation are at the expense of a reduction in total water supply since forest cover was associated with higher water use in most Andean regions. Forestation with native species was underrepresented in the reviewed studies. The impact of forestation on landslides has also been largely overlooked in the Andes. At high elevations, exotic tree plantations on Andean grasslands (e.g. paramo and puna) had the most detrimental consequences since these grasslands showed an excellent capacity for hydrological regulation and erosion mitigation but also a water yield up to 40% higher than tree plantations. People engaged in forest restoration initiative should be aware that hydrological services may take some time for society and the environment to show clear benefits after forestation.", "keywords": ["P33 - Chimie et physique du sol", "Pine plantations", "forest rehabilitation", "propri\u00e9t\u00e9 physicochimique du sol", "550", "F40 - \u00c9cologie v\u00e9g\u00e9tale", "Monitoring", "Ecosystem service", "[SDE.MCG]Environmental Sciences/Global Changes", "ecological restoration", "05 Environmental Sciences", "systematic reviews", "0207 environmental engineering", "forest cover", "hydrology", "02 engineering and technology", "hydrologie", "01 natural sciences", "630", "cycle hydrologique", "http://aims.fao.org/aos/agrovoc/c_3062", "for\u00eat", "K01 - Foresterie - Consid\u00e9rations g\u00e9n\u00e9rales", "11. Sustainability", "http://aims.fao.org/aos/agrovoc/c_13802", "reconstitution foresti\u00e8re", "P10 - Ressources en eau et leur gestion", "Land-use", "Nature and Landscape Conservation", "0105 earth and related environmental sciences", "forests", "P36 - \u00c9rosion", " conservation et r\u00e9cup\u00e9ration des sols", "2. Zero hunger", "Policy and Law", "http://aims.fao.org/aos/agrovoc/c_7182", "Forestry", "http://aims.fao.org/aos/agrovoc/c_401", "06 Biological Sciences", "15. Life on land", "6. Clean water", "Management", "http://aims.fao.org/aos/agrovoc/c_11670", "[SDE.MCG] Environmental Sciences/Global Changes", "13. Climate action", "degraded land", "07 Agricultural And Veterinary Sciences", "http://aims.fao.org/aos/agrovoc/c_3731"]}, "links": [{"href": "https://doi.org/10.1016/j.foreco.2018.11.033"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Forest%20Ecology%20and%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.foreco.2018.11.033", "name": "item", "description": "10.1016/j.foreco.2018.11.033", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.foreco.2018.11.033"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-02-01T00:00:00Z"}}, {"id": "10.1016/j.jenvman.2019.109391", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:17:05Z", "type": "Journal Article", "created": "2019-08-21", "title": "Towards ecologically functional riparian zones: A meta-analysis to develop guidelines for protecting ecosystem functions and biodiversity in agricultural landscapes", "description": "Riparian zones contribute with biodiversity and ecosystem functions of fundamental importance for regulating flow and nutrient transport in waterways. However, agricultural land-use and physical changes made to improve crop productivity and yield have resulted in modified hydrology and displaced natural vegetation. The modification to the hydrology and natural vegetation have affected the biodiversity and many ecosystem functions provided by riparian zones. Here we review the literature to provide state-of-the-art recommendations for riparian zones in agricultural landscapes. We analysed all available publications since 1984 that have quantified services provided by riparian zones and use this information to recommend minimum buffer widths. We also analysed publications that gave buffer width recommendations to sustain different groups of organisms. We found that drainage size matters for nutrient and sediment removal, but also that a 3\u202fm wide buffer zone acts as a basic nutrient filter. However, to maintain a high floral diversity, a 24\u202fm buffer zone is required, while a 144\u202fm buffer is needed to preserve bird diversity. Based on the analysis, we developed the concept of 'Ecologically Functional Riparian Zones' (ERZ) and provide a step-by-step framework that managers can use to balance agricultural needs and environmental protection of waterways from negative impacts. By applying ERZ in already existing agricultural areas, we can better meet small targets and move towards the long-term goal of achieving a more functional land management and better environmental status of waterways.", "keywords": ["Riparian zone", "river", "nutrient uptake", "hydrology", "Review", "water quality", "01 natural sciences", "Ecological functional riparian zones", "waterway transport", "freshwater environment", "biodiversity", "agriculture", "2. Zero hunger", "filter", "hydrological regime", "Agriculture", "Biodiversity", "Milj\u00f6vetenskap", "functional role", "6. Clean water", "riparian ecosystem", "agricultural land", "Aves", "Environmental Monitoring", "sandy loam", "crop production", "rural area", "12. Responsible consumption", "Buffer zone", "water temperature", "Rivers", "ecosystem function", "controlled study", "human", "14. Life underwater", "environmental protection", "Ecosystem", "environmental monitoring", "0105 earth and related environmental sciences", "ecosystem", "Agricultural", "Vegetation", "practice guideline", "species composition", "land management", "Water", "land use", "soil property", "soil texture", "landscape", "15. Life on land", "13. Climate action", "Environmental Sciences", "meta analysis"]}, "links": [{"href": "https://doi.org/10.1016/j.jenvman.2019.109391"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Environmental%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jenvman.2019.109391", "name": "item", "description": "10.1016/j.jenvman.2019.109391", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jenvman.2019.109391"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-11-01T00:00:00Z"}}, {"id": "10.1016/j.rser.2012.09.002", "type": "Feature", "geometry": null, "properties": {"license": "Restricted", "updated": "2026-05-30T16:17:15Z", "type": "Journal Article", "created": "2012-10-04", "title": "Harmonising Bioenergy Resource Potentials\u2014Methodological Lessons From Review Of State Of The Art Bioenergy Potential Assessments", "description": "Published estimates of the potential of bioenergy vary widely, mainly due to the heterogeneity of methodologies, assumptions and datasets employed. These discrepancies are confusing for policy and it is thus important to have scientific clarity on the basis of the assessment outcomes. Such clear insights can enable harmonisation of the different assessments. This review explores current state of the art approaches and methodologies used in bioenergy assessments, and identifies key elements that are critical determinants of bioenergy potentials. We apply the lessons learnt from the review exercise to compare and harmonise a selected set of country based bioenergy potential studies, and provide recommendations for conducting more comprehensive assessments. Depending on scenario assumptions, the harmonised technical biomass potential estimates up to 2030 in the selected countries range from 5.2 to 27.3 EJ in China, 1.1 to 18.8 EJ in India, 2.0 to 10.9 EJ in Indonesia, 1.6 to 7.0 EJ in Mozambique and 9.3 to 23.5 EJ in the US. From the review, we observed that generally, current studies do not cover all the basic (sustainability) elements expected in an ideal bioenergy assessment and there are marked differences in the level of parametric detail and methodological transparency between studies. Land availability and suitability lack spatial detail and especially degraded and marginal lands are poorly evaluated. Competition for water resources is hardly taken into account and biomass yields are based mostly on crude ecological zoning criteria. A few studies take into account improvements in management of agricultural and forestry production systems, but the underlying assumptions are hardly discussed. Competition for biomass resources among the various applications is crudely analysed in most studies and key assumptions such as demographic dynamics, biodiversity protection criteria, etc. are not explicitly discussed. To facilitate more comprehensive bioenergy assessments, we recommend an integrated analytical framework that includes all the key factors, employs high resolution geo-referenced datasets and accounts for potential feedback effects.", "keywords": ["greenhouse-gas", "spatial-distribution", "0211 other engineering and technologies", "Review", "02 engineering and technology", "7. Clean energy", "12. Responsible consumption", "11. Sustainability", "0202 electrical engineering", " electronic engineering", " information engineering", "Biomass", "SDG 15 - Life on Land", "2. Zero hunger", "Energy", "Milieukunde", "Methodology", "bio-energy", "Scheikunde", "15. Life on land", "plantation biomass resources", "carbon sequestration", "6. Clean water", "integrated approach", "sustainable bioenergy", "land-use scenarios", "13. Climate action", "climate-change", "water-use", "Potential"]}, "links": [{"href": "https://doi.org/10.1016/j.rser.2012.09.002"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Renewable%20and%20Sustainable%20Energy%20Reviews", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.rser.2012.09.002", "name": "item", "description": "10.1016/j.rser.2012.09.002", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.rser.2012.09.002"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-12-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2022.153162", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:17:21Z", "type": "Journal Article", "created": "2022-01-18", "title": "Global marine litter research 2015\u20132020: Geographical and methodological trends", "description": "A systematic review of research on marine macrolitter densities in the past five years (2015-2020) revealed considerable knowledge gaps in the field. Nearly half he reviewed studies were on stranded litter. Data are scarce from many of the regions estimated to mismanage the largest amounts of plastic waste. In regions where data are available these are typically from coastal areas with few data from the high and deep seas; 57% and 87% of studies on pelagic and seafloor litter, respectively, took place within 100 km from shore. Data on pelagic litter are generally constrained to the sea surface and only two of 30 pelagic studies have measured macrolitter deeper in the water column. Reported litter densities are generally highest for stranded litter, although seafloor litter densities by weight are high in some areas. Reported densities of floating litter are several orders of magnitude lower. However, a lack of standardisation of methods makes it difficult both to assess and to compare litter densities within and across the different environmental compartments in time and space. The review illustrates a great need for survey design development within the field of macroplastics and point to some long-established considerations from ecological research pertaining to independence of data points, spatial autocorrelation, sampling scale, and plot size and shape which are highly relevant also for marine litter research. These considerations are relevant both for global standardisation efforts and for independent studies. Furthermore, the knowledge gaps created by geographic and compartment biases in research needs to be addressed to identify further research needs, validate models and inform policy.", "keywords": ["Survey design", "Waste Products", "0106 biological sciences", "Marine litter", "Geography", "Spatial variation", "Macroplastics", "15. Life on land", "01 natural sciences", "Time", "13. Climate action", "Autocorrelation", "Systematic review", "14. Life underwater", "Plastics", "Environmental Monitoring", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2022.153162"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2022.153162", "name": "item", "description": "10.1016/j.scitotenv.2022.153162", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2022.153162"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2022.161211", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:17:21Z", "type": "Journal Article", "created": "2023-01-10", "title": "Nano- and microplastics commonly cause adverse impacts on plants at environmentally relevant levels: A systematic review", "description": "Over the last years there has been significant research on the presence and effects of plastics in terrestrial systems. Here we summarize current research findings on the effects of nano- and microplastics (NMPs) on terrestrial plants, with the aim to determine patterns of response and sensitive endpoints. We conducted a systematic review (based on 78 studies) on the effects of NMPs on germination, plant growth and biochemical biomarkers. This review highlights that the majority of studies to date have used pristine polystyrene or polyethylene particles, either in a hydroponic or pot-plant setup. Based on these studies we found that effects on plants are widespread. We noted similar responses between and within monocots and dicots to NMPs, except for consistent lower germination seen in dicots exposed to NMPs. During early development, germination and root growth are more strongly affected compared to shoot growth. NMPs induced similar adverse growth effects on plant biomass and length in the most tested plant species (lettuce, wheat, corn, and rice) irrespective of the polymer type and size used. Moreover, biomarker responses were consistent across species; chlorophyll levels were commonly negatively affected, while stress indicators (e.g., ROS or free radicals) and stress respondents (e.g., antioxidant enzymes) were consistently upregulated. In addition, effects were commonly observed at environmentally relevant levels. These findings provide clear evidence that NMPs have wide-ranging impacts on plant performance. However, as most studies have been conducted under highly controlled conditions and with pristine plastics, there is an urgent need to test under more environmentally realistic conditions to ensure the lab-based studies can be extrapolated to the field.", "keywords": ["Microplastics", "Terrestrial plants", "Systematic review", "Germination", "Nanoplastics", "Biochemical stress", "Biomass", "Plants", "15. Life on land", "Seed germination", "Plastics", "Nano- and microplastic", "Plant growth"]}, "links": [{"href": "https://iris.cnr.it/bitstream/20.500.14243/458821/1/prod_478312-doc_195935.pdf"}, {"href": "https://doi.org/10.1016/j.scitotenv.2022.161211"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2022.161211", "name": "item", "description": "10.1016/j.scitotenv.2022.161211", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2022.161211"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-04-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2021.150818", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:17:21Z", "type": "Journal Article", "created": "2021-10-11", "title": "A review of the use of microplastics in reconstructing dated sedimentary archives", "description": "Buried microplastics (plastics, <5\u00a0mm) have been documented within the sediment column of both marine and lacustrine environments. However, the number of peer-review studies published on the subject remains limited and confidence in data reliability varies considerably. Here we critically review the state of the literature on microplastic loading inventories in dated sedimentary and soil profiles. We conclude that microplastics are being sequestered across a variety of sedimentary environments globally, at a seemingly increasing rate. However, microplastics are also readily mobilised both within depositional settings and the workplace. Microplastics are commonly reported from sediments dated to before the onset of plastic production and researcher-derived microplastics frequently contaminate samples. Additionally, the diversity of microplastic types and issues of constraining source points has so far hindered interpretation of depositional settings. Therefore, further research utilizing high quality data sets, greater levels of reporting transparency, and well-established methodologies from the geosciences will be required for any validation of microplastics as a sediment dating method or in quantifying temporally resolved microplastic loading inventories in sedimentary sinks with confidence.", "keywords": ["0106 biological sciences", "Geologic Sediments", "550", "Anthropocene", " Microplastic", " Sediment", " Dating", " Critical review", "13. Climate action", "Microplastics", "500", "Reproducibility of Results", "Plastics", "01 natural sciences", "Water Pollutants", " Chemical", "Environmental Monitoring", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2021.150818"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2021.150818", "name": "item", "description": "10.1016/j.scitotenv.2021.150818", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2021.150818"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-01T00:00:00Z"}}, {"id": "10.1371/journal.pone.0010867", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:20:15Z", "type": "Journal Article", "created": "2010-05-27", "title": "Ecosystem Carbon Stock Influenced by Plantation Practice: Implications for Planting Forests as a Measure of Climate Change Mitigation", "description": "Uncertainties remain in the potential of forest plantations to sequestrate carbon (C). We synthesized 86 experimental studies with paired-site design, using a meta-analysis approach, to quantify the differences in ecosystem C pools between plantations and their corresponding adjacent primary and secondary forests (natural forests). Totaled ecosystem C stock in plant and soil pools was 284 Mg C ha(-1) in natural forests and decreased by 28% in plantations. In comparison with natural forests, plantations decreased aboveground net primary production, litterfall, and rate of soil respiration by 11, 34, and 32%, respectively. Fine root biomass, soil C concentration, and soil microbial C concentration decreased respectively by 66, 32, and 29% in plantations relative to natural forests. Soil available N, P and K concentrations were lower by 22, 20 and 26%, respectively, in plantations than in natural forests. The general pattern of decreased ecosystem C pools did not change between two different groups in relation to various factors: stand age (< 25 years vs. > or = 25 years), stand types (broadleaved vs. coniferous and deciduous vs. evergreen), tree species origin (native vs. exotic) of plantations, land-use history (afforestation vs. reforestation) and site preparation for plantations (unburnt vs. burnt), and study regions (tropic vs. temperate). The pattern also held true across geographic regions. Our findings argued against the replacement of natural forests by the plantations as a measure of climate change mitigation.", "keywords": ["0106 biological sciences", "Conservation of Natural Resources", "Science", "Climate Change", "Ante-disciplinary", "01 natural sciences", "333", "Trees", "Inclusive", "Open Access", "Soil", "Engineering", "Interdisciplinary", "Biomass", "Biology", "PLOS", "Ecosystem", "2. Zero hunger", "Geography", "Research", "Physics", "Q", "Publications", "R", "Agriculture", "04 agricultural and veterinary sciences", "15. Life on land", "Peer-review", "Carbon", "Open-Access", "Chemistry", "Public Library of Science", "13. Climate action", "Medicine", "0401 agriculture", " forestry", " and fisheries", "Research Article"]}, "links": [{"href": "https://doi.org/10.1371/journal.pone.0010867"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PLoS%20ONE", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1371/journal.pone.0010867", "name": "item", "description": "10.1371/journal.pone.0010867", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1371/journal.pone.0010867"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-05-27T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2025.109815", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:17:37Z", "type": "Journal Article", "created": "2025-04-17", "title": "Response of soil biota to agricultural management practices: A systematic quantitative meta-data-analysis and method selection framework", "description": "Soil organisms are vital to soil health, however, their inclusion in monitoring frameworks remains limited. Yet, it is well-known that agricultural management practices distinctively affect soil biota and the functions that they support. In this paper, we systematically evaluated the impact of management practices related to carbon and nutrient, vegetation, pest and disease and soil management, as well as grazing management on soil biota. Using a meta-data analysis approach, we systematically reviewed meta-analyses to quantify management practice(s) effects on soil biological actors, including macrofauna, mesofauna, microfauna, and the microbiome. We identified and screened 698 articles, of which 90 meta-analyses remained eligible after quality control and redundancy analysis, giving rise to a total of 790 pairwise combinations supported by 74\u2032526 observations. In this paper, we demonstrate how specific management practices impact specific soil biota, which in turn may also influence soil processes and functions that these soil biota support. We reveal key knowledge gaps, particularly concerning the soil meso- and macrofauna, but also soil protists. Our study demonstrates which agricultural practices may support or diminish soil biology, providing much needed guidance on the selection of sustainable farming approaches, such as reduced tillage, organic fertilization, cover cropping, and intercropping. Lastly, we introduce a \u201cUtility-Robustness\u201d scoring system for soil actors, using a systematic framework to inform biological indicator selection tailored to specific management contexts. This fully transparent approach is designed to remain adaptable and expandable in the coming years, as new data and insights emerge.", "keywords": ["Soil management", "Soil biology", "Agroecosystem", "Soil health", "Review", "Soil quality"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2025.109815"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2025.109815", "name": "item", "description": "10.1016/j.soilbio.2025.109815", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2025.109815"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-08-01T00:00:00Z"}}, {"id": "10.1371/journal.pone.0012346", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:20:15Z", "type": "Journal Article", "created": "2010-09-01", "title": "Fruit And Soil Quality Of Organic And Conventional Strawberry Agroecosystems", "description": "Sale of organic foods is one of the fastest growing market segments within the global food industry. People often buy organic food because they believe organic farms produce more nutritious and better tasting food from healthier soils. Here we tested if there are significant differences in fruit and soil quality from 13 pairs of commercial organic and conventional strawberry agroecosystems in California.At multiple sampling times for two years, we evaluated three varieties of strawberries for mineral elements, shelf life, phytochemical composition, and organoleptic properties. We also analyzed traditional soil properties and soil DNA using microarray technology. We found that the organic farms had strawberries with longer shelf life, greater dry matter, and higher antioxidant activity and concentrations of ascorbic acid and phenolic compounds, but lower concentrations of phosphorus and potassium. In one variety, sensory panels judged organic strawberries to be sweeter and have better flavor, overall acceptance, and appearance than their conventional counterparts. We also found the organically farmed soils to have more total carbon and nitrogen, greater microbial biomass and activity, and higher concentrations of micronutrients. Organically farmed soils also exhibited greater numbers of endemic genes and greater functional gene abundance and diversity for several biogeochemical processes, such as nitrogen fixation and pesticide degradation.Our findings show that the organic strawberry farms produced higher quality fruit and that their higher quality soils may have greater microbial functional capability and resilience to stress. These findings justify additional investigations aimed at detecting and quantifying such effects and their interactions.", "keywords": ["570", "Plant Extracts - analysis", "Nitrogen", "Science", "Agriculture - methods", "Fragaria - growth & development", "910", "Ante-disciplinary", "Soil - analysis", "Fragaria", "630", "Inclusive", "Carbon - analysis", "Open Access", "Soil", "Engineering", "Fruit - chemistry", "Interdisciplinary", "Biology", "PLOS", "2. Zero hunger", "Organic Agriculture", "Nitrogen - analysis", "Plant Extracts", "Research", "Physics", "Q", "R", "Agriculture", "04 agricultural and veterinary sciences", "15. Life on land", "Fragaria - genetics", "Peer-review", "Carbon", "Open-Access", "Chemistry", "Public Library of Science", "Fruit - growth & development", "Fruit", "Fragaria - chemistry", "Medicine", "0401 agriculture", " forestry", " and fisheries", "Research Article"]}, "links": [{"href": "https://doi.org/10.1371/journal.pone.0012346"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PLoS%20ONE", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1371/journal.pone.0012346", "name": "item", "description": "10.1371/journal.pone.0012346", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1371/journal.pone.0012346"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-09-01T00:00:00Z"}}, {"id": "10.1016/j.ultsonch.2019.05.009", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:17:51Z", "type": "Journal Article", "created": "2019-05-09", "title": "Effects of cavitation on different microorganisms: The current understanding of the mechanisms taking place behind the phenomenon. A review and proposals for further research", "description": "A sudden decrease in pressure triggers the formation of vapour and gas bubbles inside a liquid medium (also called cavitation). This leads to many (key) engineering problems: material loss, noise, and vibration of hydraulic machinery. On the other hand, cavitation is a potentially useful phenomenon: the extreme conditions are increasingly used for a wide variety of applications such as surface cleaning, enhanced chemistry, and wastewater treatment (bacteria eradication and virus inactivation). Despite this significant progress, a large gap persists between the understanding of the mechanisms that contribute to the effects of cavitation and its application. Although engineers are already commercializing devices that employ cavitation, we are still not able to answer the fundamental question: What precisely are the mechanisms how bubbles can clean, disinfect, kill bacteria and enhance chemical activity? The present paper is a thorough review of the recent (from 2005 onward) work done in the fields of cavitation-assisted microorganism's destruction and aims to serve as a foundation to build on in the next years.", "keywords": ["Bacteria", "Fungi", "cavitation", " microorganisms", " destruction", " mechanisms", " reviews", "04 agricultural and veterinary sciences", "6. Clean water", "Disinfection", "Physical Phenomena", "Sonication", "kavitacija", " mikroorganizmi", " mehanizmi", " razgradnja", "0404 agricultural biotechnology", "13. Climate action", "info:eu-repo/classification/udc/532", "Viruses", "0405 other agricultural sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.ultsonch.2019.05.009"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ultrasonics%20Sonochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.ultsonch.2019.05.009", "name": "item", "description": "10.1016/j.ultsonch.2019.05.009", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.ultsonch.2019.05.009"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-10-01T00:00:00Z"}}, {"id": "10.1016/j.xplc.2020.100104", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:17:53Z", "type": "Journal Article", "created": "2020-08-21", "title": "No Home without Hormones: How Plant Hormones Control Legume Nodule Organogenesis", "description": "The establishment of symbiotic nitrogen fixation requires the coordination of both nodule development and infection events. Despite the evolution of a variety of anatomical structures, nodule organs serve\u00a0a common purpose in establishing a localized area that facilitates efficient nitrogen fixation. As in all plant developmental processes, the establishment of a new nodule organ is regulated by plant hormones. During nodule initiation, regulation of plant hormone signaling is one of the major targets of symbiotic signaling. We review the role of major developmental hormones in the initiation of the nodule organ and argue that the manipulation of plant hormones is a key requirement for engineering nitrogen fixation in non-legumes as the basis for improved food security and sustainability.", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Cytokinins", "hormones", "nodule", "Fabaceae", "legume", "Review Article", "Ethylenes", "Plant Root Nodulation", "symbiosis", "Gibberellins", "03 medical and health sciences", "Plant Growth Regulators", "nitrogen fixation", "Nitrogen Fixation", "Symbiosis"]}, "links": [{"href": "https://doi.org/10.1016/j.xplc.2020.100104"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Communications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.xplc.2020.100104", "name": "item", "description": "10.1016/j.xplc.2020.100104", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.xplc.2020.100104"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-09-01T00:00:00Z"}}, {"id": "10.1017/qpb.2025.4", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:17:54Z", "type": "Journal Article", "created": "2025-04-02", "title": "Changing paradigms for the micronutrient zinc, a known protein cofactor, as a signal relaying also cellular redox state", "description": "Abstract    <p>The micronutrient zinc (Zn) is often poorly available but toxic when present in excess, so a tightly controlled Zn homoeostasis network operates in all organisms. This review summarizes our present understanding of plant Zn homoeostasis. In Arabidopsis, about 1,900 Zn-binding metalloproteins require Zn as a cofactor. Abundant Zn metalloproteins reside in plastids, mitochondria and peroxisomes, emphasizing the need to address how Zn reaches these proteins. Apo\uffe2\uff80\uff93Zn metalloproteins do not acquire Zn2+ from a cytosolic pool of free cations, but instead through associative ligand exchange from Zn-buffering molecules. The importance of cytosolic thiols in Zn buffering suggests that, besides elevated Zn influx, a more oxidized redox state is also predicted to cause elevated labile-bound Zn levels, consistent with the suppression of a Zn deficiency marker under oxidative stress. Therefore, we consider a broadened physiological scope in plants for a possible signalling role of Zn2+, experimentally supported only in animals to date.</p", "keywords": ["zinc transporter", "QK1-989", "metal homeostasis", "Botany", "metalloprotein", "Plant culture", "plant nutrition", "Review", "zinc sensor", "SB1-1110"], "contacts": [{"organization": "Ute Kr\u00e4mer", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1017/qpb.2025.4"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Quantitative%20Plant%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1017/qpb.2025.4", "name": "item", "description": "10.1017/qpb.2025.4", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1017/qpb.2025.4"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-01T00:00:00Z"}}, {"id": "10.1038/s41396-023-01467-0", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:18:18Z", "type": "Journal Article", "created": "2023-07-14", "title": "Nitrification and beyond: metabolic versatility of ammonia oxidising archaea", "description": "Abstract                <p>Ammonia oxidising archaea are among the most abundant living organisms on Earth and key microbial players in the global nitrogen cycle. They carry out oxidation of ammonia to nitrite, and their activity is relevant for both food security and climate change. Since their discovery nearly 20 years ago, major insights have been gained into their nitrogen and carbon metabolism, growth preferences and their mechanisms of adaptation to the environment, as well as their diversity, abundance and activity in the environment. Despite significant strides forward through the cultivation of novel organisms and omics-based approaches, there are still many knowledge gaps on their metabolism and the mechanisms which enable them to adapt to the environment. Ammonia oxidising microorganisms are typically considered metabolically streamlined and highly specialised. Here we review the physiology of ammonia oxidising archaea, with focus on aspects of metabolic versatility and regulation, and discuss these traits in the context of nitrifier ecology.</p", "keywords": ["2. Zero hunger", "Ammonia", "13. Climate action", "Review Article", "Nitrogen Cycle", "15. Life on land", "Archaea", "Nitrification", "Oxidation-Reduction", "Soil Microbiology"], "contacts": [{"organization": "Chloe L Wright, Laura E Lehtovirta-Morley,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1038/s41396-023-01467-0"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/The%20ISME%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41396-023-01467-0", "name": "item", "description": "10.1038/s41396-023-01467-0", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41396-023-01467-0"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-07-14T00:00:00Z"}}, {"id": "10.1038/s41396-018-0072-6", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:18:17Z", "type": "Journal Article", "created": "2018-02-14", "title": "Microbial cycling of isoprene, the most abundantly produced biological volatile organic compound on Earth", "description": "Abstract<p>Isoprene (2-methyl-1,3-butadiene), the most abundantly produced biogenic volatile organic compound (BVOC) on Earth, is highly reactive and can have diverse and often detrimental atmospheric effects, which impact on climate and health. Most isoprene is produced by terrestrial plants, but (micro)algal production is important in aquatic environments, and the relative bacterial contribution remains unknown. Soils are a sink for isoprene, and bacteria that can use isoprene as a carbon and energy source have been cultivated and also identified using cultivation-independent methods from soils, leaves and coastal/marine environments. Bacteria belonging to the Actinobacteria are most frequently isolated and identified, and Proteobacteria have also been shown to degrade isoprene. In the freshwater-sediment isolate, Rhodococcus strain AD45, initial oxidation of isoprene to 1,2-epoxy-isoprene is catalyzed by a multicomponent isoprene monooxygenase encoded by the genes isoABCDEF. The resultant epoxide is converted to a glutathione conjugate by a glutathione S-transferase encoded by isoI, and further degraded by enzymes encoded by isoGHJ. Genome sequence analysis of actinobacterial isolates belonging to the genera Rhodococcus, Mycobacterium and Gordonia has revealed that isoABCDEF and isoGHIJ are linked in an operon, either on a plasmid or the chromosome. In Rhodococcus strain AD45 both isoprene and epoxy-isoprene induce a high level of transcription of 22 contiguous genes, including isoABCDEF and isoGHIJ. Sequence analysis of the isoA gene, encoding the large subunit of the oxygenase component of isoprene monooxygenase, from isolates has facilitated the development of PCR primers that are proving valuable in investigating the ecology of uncultivated isoprene-degrading bacteria.</p>", "keywords": ["2. Zero hunger", "0301 basic medicine", "570", "0303 health sciences", "550", "QH301 Biology", "Review Article", "Plants", "15. Life on land", "6. Clean water", "Mixed Function Oxygenases", "Actinobacteria", "Soil", "03 medical and health sciences", "Hemiterpenes", "13. Climate action", "Pentanes", "11. Sustainability", "Butadienes", "Microalgae", "Rhodococcus"]}, "links": [{"href": "https://ueaeprints.uea.ac.uk/id/eprint/66436/1/Published_manuscript.pdf"}, {"href": "http://www.nature.com/articles/s41396-018-0072-6.pdf"}, {"href": "https://repository.essex.ac.uk/21526/1/s41396-018-0072-6.pdf"}, {"href": "https://doi.org/10.1038/s41396-018-0072-6"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/The%20ISME%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41396-018-0072-6", "name": "item", "description": "10.1038/s41396-018-0072-6", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41396-018-0072-6"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-02-20T00:00:00Z"}}, {"id": "10.1111/gcb.14644", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:24Z", "type": "Journal Article", "created": "2019-04-07", "title": "A critical review of the impacts of cover crops on nitrogen leaching, net greenhouse gas balance and crop productivity", "description": "Abstract<p>Cover crops play an increasingly important role in improving soil quality, reducing agricultural inputs and improving environmental sustainability. The main objectives of this critical global review and systematic analysis were to assess cover crop practices in the context of their impacts on nitrogen leaching, net greenhouse gas balances (NGHGB) and crop productivity. Only studies that investigated the impacts of cover crops and measured one or a combination of nitrogen leaching, soil organic carbon (SOC), nitrous oxide (N2O), grain yield and nitrogen in grain of primary crop, and had a control treatment were included in the analysis. Long\uffe2\uff80\uff90term studies were uncommon, with most data coming from studies lasting 2\uffe2\uff80\uff933\uffc2\uffa0years. The literature search resulted in 106 studies carried out at 372 sites and covering different countries, climatic zones and management. Our analysis demonstrates that cover crops significantly (p\uffc2\uffa0&lt;\uffc2\uffa00.001) decreased N leaching and significantly (p\uffc2\uffa0&lt;\uffc2\uffa00.001) increased SOC sequestration without having significant (p\uffc2\uffa0&gt;\uffc2\uffa00.05) effects on direct N2O emissions. Cover crops could mitigate the NGHGB by 2.06\uffc2\uffa0\uffc2\uffb1\uffc2\uffa02.10\uffc2\uffa0Mg CO2\uffe2\uff80\uff90eq\uffc2\uffa0ha\uffe2\uff88\uff921\uffc2\uffa0year\uffe2\uff88\uff921. One of the potential disadvantages of cover crops identified was the reduction in grain yield of the primary crop by \uffe2\uff89\uff884%, compared to the control treatment. This drawback could be avoided by selecting mixed cover crops with a range of legumes and non\uffe2\uff80\uff90legumes, which increased the yield by \uffe2\uff89\uff8813%. These advantages of cover crops justify their widespread adoption. However, management practices in relation to cover crops will need to be adapted to specific soil, management and regional climatic conditions.</p>", "keywords": ["Crops", " Agricultural", "net greenhouse gas balance", "330", "Supplementary Data", "Nitrogen", "QH301 Biology", "Supplementary data available", "12. Responsible consumption", "Nitrous oxide emissions", "QH301", "Greenhouse Gases", "Soil", "N content", "nitrate", "C sequestration", "N leaching", "Environmental Chemistry", "General Environmental Science", "NE/M019691/1", "2. Zero hunger", "Global and Planetary Change", "Catch crop", "Ecology", "Soil organic carbon", "green manure", "Natural Environment Research Council (NERC)", "Research Review", "Agriculture", "04 agricultural and veterinary sciences", "15. Life on land", "yield", "Crop Production", "13. Climate action", "N in grain", "Biotechnology and Biological Sciences Research Council (BBSRC)", "Cover crop", "0401 agriculture", " forestry", " and fisheries", "BB/N013484/1", "BB/N013468/1"]}, "links": [{"href": "https://doi.org/10.1111/gcb.14644"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.14644", "name": "item", "description": "10.1111/gcb.14644", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.14644"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-05-13T00:00:00Z"}}, {"id": "10.1093/femsre/fuaa015", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:00Z", "type": "Journal Article", "created": "2020-05-20", "title": "The food-gut axis: lactic acid bacteria and their link to food, the gut microbiome and human health", "description": "ABSTRACT<p>Lactic acid bacteria (LAB) are present in foods, the environment and the animal gut, although fermented foods (FFs) are recognized as the primary niche of LAB activity. Several LAB strains have been studied for their health-promoting properties and are employed as probiotics. FFs are recognized for their potential beneficial effects, which we review in this article. They are also an important source of LAB, which are ingested daily upon FF consumption. In this review, we describe the diversity of LAB and their occurrence in food as well as the gut microbiome. We discuss the opportunities to study LAB diversity and functional properties by considering the availability of both genomic and metagenomic data in public repositories, as well as the different latest computational tools for data analysis. In addition, we discuss the role of LAB as potential probiotics by reporting the prevalence of key genomic features in public genomes and by surveying the outcomes of LAB use in clinical trials involving human subjects. Finally, we highlight the need for further studies aimed at improving our knowledge of the link between LAB-fermented foods and the human gut from the perspective of health promotion.</p>", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "human microbiome", "Review Article", "Gastrointestinal Microbiome", "3. Good health", "lactic acid bacteria", "03 medical and health sciences", "probiotics", "Health", "Lactobacillales", "food microbiome; human microbiome; lactic acid bacteria; probiotics", "food microbiome", "Food Microbiology", "Humans"]}, "links": [{"href": "https://www.iris.unina.it/bitstream/11588/811718/2/FEMSMicroRev%2c2020_LABfoodgut.pdf"}, {"href": "http://academic.oup.com/femsre/article-pdf/44/4/454/37084083/fuaa015.pdf"}, {"href": "https://doi.org/10.1093/femsre/fuaa015"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/FEMS%20Microbiology%20Reviews", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/femsre/fuaa015", "name": "item", "description": "10.1093/femsre/fuaa015", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/femsre/fuaa015"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-06-18T00:00:00Z"}}, {"id": "10.1098/rspa.2019.0098", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:19:07Z", "type": "Journal Article", "created": "2019-08-14", "title": "Silicon isotopes in Arctic and sub-Arctic glacial meltwaters: the role of subglacial weathering in the silicon cycle", "description": "<p>             Glacial environments play an important role in high-latitude marine nutrient cycling, potentially contributing significant fluxes of silicon (Si) to the polar oceans, either as dissolved silicon (DSi) or as dissolvable amorphous silica (ASi). Silicon is a key nutrient in promoting marine primary productivity, contributing to atmospheric CO             2             removal. We present the current understanding of Si cycling in glacial systems, focusing on the Si isotope (\uffce\uffb4             30             Si) composition of glacial meltwaters. We combine existing glacial \uffce\uffb4             30             Si data with new measurements from 20 sub-Arctic glaciers, showing that glacial meltwaters consistently export isotopically light DSi compared with non-glacial rivers (+0.16\uffe2\uff80\uffb0 versus +1.38\uffe2\uff80\uffb0). Glacial \uffce\uffb4             30             Si             ASi             composition ranges from \uffe2\uff88\uff920.05\uffe2\uff80\uffb0 to \uffe2\uff88\uff920.86\uffe2\uff80\uffb0 but exhibits low seasonal variability. Silicon fluxes and \uffce\uffb4             30             Si composition from glacial systems are not commonly included in global Si budgets and isotopic mass balance calculations at present. We discuss outstanding questions, including the formation mechanism of ASi and the export of glacial nutrients from fjords. Finally, we provide a contextual framework for the recent advances in our understanding of subglacial Si cycling and highlight critical research avenues for assessing potential future changes in these environments.           </p", "keywords": ["glaciers and ice sheets", "550", "subglacial weathring", "subglacial weathering", "Review Article", "15. Life on land", "Glaciers and Ice Sheets", "01 natural sciences", "Silicon Isotopes", "silicon isotopes", "silicon cycle", "13. Climate action", "VDP::Matematikk og Naturvitenskap: 400::Geofag: 450", "Silicon Cycle", "Subglacial Weathering", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://royalsocietypublishing.org/doi/pdf/10.1098/rspa.2019.0098"}, {"href": "https://doi.org/10.1098/rspa.2019.0098"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20Royal%20Society%20A%3A%20Mathematical%2C%20Physical%20and%20Engineering%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1098/rspa.2019.0098", "name": "item", "description": "10.1098/rspa.2019.0098", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1098/rspa.2019.0098"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-08-01T00:00:00Z"}}, {"id": "10.1099/mic.0.000931", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:19:07Z", "type": "Journal Article", "created": "2020-05-22", "title": "Microbial metabolism of isoprene: a much-neglected climate-active gas", "description": "<p>The climate-active gas isoprene is the major volatile produced by a variety of trees and is released into the atmosphere in enormous quantities, on a par with global emissions of methane. While isoprene production in plants and its effect on atmospheric chemistry have received considerable attention, research into the biological isoprene sink has been neglected until recently. Here, we review current knowledge on the sources and sinks of isoprene and outline its environmental effects. Focusing on degradation by microbes, many of which are able to use isoprene as the sole source of carbon and energy, we review recent studies characterizing novel isoprene degraders isolated from soils, marine sediments and in association with plants. We describe the development and use of molecular methods to identify, quantify and genetically characterize isoprene-degrading strains in environmental samples. Finally, this review identifies research imperatives for the further study of the environmental impact, ecology, regulation and biochemistry of this interesting group of microbes.</p>", "keywords": ["0301 basic medicine", "0303 health sciences", "550", "Bacteria", "Review", "Plants", "15. Life on land", "03 medical and health sciences", "Biodegradation", " Environmental", "Hemiterpenes", "Genes", " Bacterial", "13. Climate action", "8. Economic growth", "Butadienes", "Seawater", "Metabolic Networks and Pathways", "Soil Microbiology"]}, "links": [{"href": "https://ueaeprints.uea.ac.uk/id/eprint/75324/1/Published_Version.pdf"}, {"href": "https://repository.essex.ac.uk/29368/1/Microbial%20metabolism%20of%20isoprene%20a%20much-neglected%20climate-active%20gas.pdf"}, {"href": "https://doi.org/10.1099/mic.0.000931"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1099/mic.0.000931", "name": "item", "description": "10.1099/mic.0.000931", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1099/mic.0.000931"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-07-01T00:00:00Z"}}, {"id": "10.1111/1462-2920.13956", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:16Z", "type": "Journal Article", "created": "2017-10-13", "title": "Type VI secretion systems in plant-associated bacteria", "description": "Summary<p>The type VI secretion system (T6SS) is a bacterial nanomachine used to inject effectors into prokaryotic or eukaryotic cells and is thus involved in both host manipulation and interbacterial competition. The T6SS is widespread among Gram\uffe2\uff80\uff90negative bacteria, mostly within the Proteobacterium Phylum. This secretion system is commonly found in commensal and pathogenic plant\uffe2\uff80\uff90associated bacteria. Phylogenetic analysis of phytobacterial T6SS clusters shows that they are distributed in the five main clades previously described (group 1\uffe2\uff80\uff935). The even distribution of the system among commensal and pathogenic phytobacteria suggests that the T6SS provides fitness and colonization advantages in planta and that the role of the T6SS is not restricted to virulence. This manuscript reviews the phylogeny and biological roles of the T6SS in plant\uffe2\uff80\uff90associated bacteria, highlighting a remarkable diversity both in terms of mechanism and function.</p>", "keywords": ["PROTEIN SECRETION", "0301 basic medicine", "570", "VIBRIO-CHOLERAE", "PATHOGENIC BACTERIA", "Microbiology", "03 medical and health sciences", "Bacterial Proteins", "Proteobacteria", "Phylogeny", "Plant Diseases", "2. Zero hunger", "0303 health sciences", "Science & Technology", "Virulence", "PSEUDOMONAS-AERUGINOSA", "Minireviews", "Plants", "Type VI Secretion Systems", "IN-SILICO ANALYSIS", "AGROBACTERIUM-TUMEFACIENS", "INTERBACTERIAL COMPETITION", "GENOMIC ANALYSIS", "EFFECTORS", "VIRULENCE", "Life Sciences & Biomedicine", "0605 Microbiology"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/1462-2920.13956"}, {"href": "https://doi.org/10.1111/1462-2920.13956"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/1462-2920.13956", "name": "item", "description": "10.1111/1462-2920.13956", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/1462-2920.13956"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-11-10T00:00:00Z"}}, {"id": "10.1111/1462-2920.15647", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:19:16Z", "type": "Journal Article", "created": "2021-06-17", "title": "\u2018Cry\u2010for\u2010help\u2019 in contaminated soil: a dialogue among plants and soil microbiome to survive in hostile conditions", "description": "Summary<p>An open question in environmental ecology regards the mechanisms triggered by root chemistry to drive the assembly and functionality of a beneficial microbiome to rapidly adapt to stress conditions. This phenomenon, originally described in plant defence against pathogens and predators, is encompassed in the \uffe2\uff80\uff98cry\uffe2\uff80\uff90for\uffe2\uff80\uff90help\uffe2\uff80\uff99 hypothesis. Evidence suggests that this mechanism may be part of the adaptation strategy to ensure the holobiont fitness in polluted environments. Polychlorinated biphenyls (PCBs) were considered as model pollutants due to their toxicity, recalcitrance and poor phyto\uffe2\uff80\uff90extraction potential, which lead to a plethora of phytotoxic effects and rise environmental safety concerns. Plants have inefficient detoxification processes to catabolize PCBs, even leading to by\uffe2\uff80\uff90products with a higher toxicity. We propose that the \uffe2\uff80\uff98cry\uffe2\uff80\uff90for\uffe2\uff80\uff90help\uffe2\uff80\uff99 mechanism could drive the exudation\uffe2\uff80\uff90mediated recruitment and sustainment of the microbial services for PCBs removal, exerted by an array of anaerobic and aerobic microbial degrading populations working in a complex metabolic network. Through this synergistic interaction, the holobiont copes with the soil contamination, releasing the plant from the pollutant stress by the ecological services provided by the boosted metabolism of PCBs microbial degraders. Improving knowledge of root chemistry under PCBs stress is, therefore, advocated to design rhizoremediation strategies based on plant microbiome engineering.</p", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Microbiota", "Minireviews", "15. Life on land", "Polychlorinated Biphenyls", "6. Clean water", "Soil", "03 medical and health sciences", "Biodegradation", " Environmental", "13. Climate action", "Soil Pollutants", "Environmental Pollution", "Soil Microbiology"]}, "links": [{"href": "https://air.unimi.it/bitstream/2434/857922/2/Rolli%20et%20al.%202021_EM.pdf"}, {"href": "https://air.unimi.it/bitstream/2434/857922/4/1462-2920.15647.pdf"}, {"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/1462-2920.15647"}, {"href": "https://doi.org/10.1111/1462-2920.15647"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/1462-2920.15647", "name": "item", "description": "10.1111/1462-2920.15647", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/1462-2920.15647"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-06-23T00:00:00Z"}}, {"id": "10.1111/ejss.13472", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:19:20Z", "type": "Journal Article", "created": "2024-03-20", "title": "Cover crops affect pool specific soil organic carbon in cropland \u2013 A meta\u2010analysis", "description": "Abstract                   <p>                     Cover crops (CC) offer numerous benefits to agroecosystems, particularly in the realm of soil organic carbon (SOC) accrual and loss mitigation. However, uncertainties persist regarding the extent to which CCs, in co\uffe2\uff80\uff90occurrence with environmental factors, influence SOC responses and associated C pools. We therefore performed a weighted meta\uffe2\uff80\uff90analysis on the effects of CCs on the mineral\uffe2\uff80\uff90associated organic carbon (MAOC), the particulate organic carbon (POC) and the microbial biomass carbon (MBC) pool compared to no CC cultivation in arable cropland. Our study summarized global research of comparable management, with a focus on climatic zones representative of Europe, such as arid, temperate and boreal climates. In this meta\uffe2\uff80\uff90analysis, we included 71 independent studies from 61 articles published between 1990 and June 2023 in several scientific and grey literature databases. Sensitivity analysis was conducted and did not identify any significant publication bias. The results revealed that CCs had an overall statistically significant positive effect on SOC pools, increasing MAOC by 4.8% (95% CI: 0.6%\uffe2\uff80\uff939.4%,                     n                     \uffe2\uff80\uff89=\uffe2\uff80\uff8916), POC by 23.2% (95% CI: 13.9%\uffe2\uff80\uff9334.4%,                     n                     \uffe2\uff80\uff89=\uffe2\uff80\uff8939) and MBC by 20.2% (95% CI: 11.7%\uffe2\uff80\uff9330.7%,                     n                     \uffe2\uff80\uff89=\uffe2\uff80\uff8930) in the top soil, compared to no CC cultivation. Thereby, CCs feed into the stable as well as the more labile C pools. The effect of CCs on MAOC was dependent on soil clay content and initial SOC concentration, whereas POC was influenced by moderators such as CC peak biomass and experiment duration. For MBC, for example, clay content, crop rotation duration and tillage depth were identified as important drivers. Based on our results on the effects of CCs on SOC pools and significant moderators, we identified several research needs. A pressing need for additional experiments exploring the effects of CCs on SOC pools was found, with a particular focus on MAOC and POC. Further, we emphasize the necessity for conducting European studies spanning the north\uffe2\uff80\uff93south gradient. In conclusion, our results show that CC cultivation is a key strategy to promote C accrual in different SOC pools. Additionally, this meta\uffe2\uff80\uff90analysis provides new insights into the state of knowledge regarding SOC pool changes influenced by CCs, offering quantitative summary results and shedding light on the sources of heterogeneity affecting these findings.                   </p", "keywords": ["2. Zero hunger", "MBC", "synthesis", "MAOC", "effect size", "review", "610", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "13. Climate action", "EJPSOIL", "0401 agriculture", " forestry", " and fisheries", "SOC", "POC", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/ejss.13472"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/European%20Journal%20of%20Soil%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/ejss.13472", "name": "item", "description": "10.1111/ejss.13472", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/ejss.13472"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-03-01T00:00:00Z"}}, {"id": "10.1111/gcb.14774", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:24Z", "type": "Journal Article", "created": "2019-08-28", "title": "Effect of land-use and land-cover change on mangrove blue carbon: A systematic review", "description": "Abstract<p>Mangroves shift from carbon sinks to sources when affected by anthropogenic land\uffe2\uff80\uff90use and land\uffe2\uff80\uff90cover change (LULCC). Yet, the magnitude and temporal scale of these impacts are largely unknown. We undertook a systematic review to examine the influence of LULCC on mangrove carbon stocks and soil greenhouse gas (GHG) effluxes. A search of 478 data points from the peer\uffe2\uff80\uff90reviewed literature revealed a substantial reduction of biomass (82%\uffc2\uffa0\uffc2\uffb1\uffc2\uffa035%) and soil (54%\uffc2\uffa0\uffc2\uffb1\uffc2\uffa013%) carbon stocks due to LULCC. The relative loss depended on LULCC type, time since LULCC and geographical and climatic conditions of sites. We also observed that the loss of soil carbon stocks was linked to the decreased soil carbon content and increased soil bulk density over the first 100\uffc2\uffa0cm depth. We found no significant effect of LULCC on soil GHG effluxes. Regeneration efforts (i.e. restoration, rehabilitation and afforestation) led to biomass recovery after ~40\uffc2\uffa0years. However, we found no clear patterns of mangrove soil carbon stock re\uffe2\uff80\uff90establishment following biomass recovery. Our findings suggest that regeneration may help restore carbon stocks back to pre\uffe2\uff80\uff90disturbed levels over decadal to century time scales only, with a faster rate for biomass recovery than for soil carbon stocks. Therefore, improved mangrove ecosystem management by preventing further LULCC and promoting rehabilitation is fundamental for effective climate change mitigation policy.</p>", "keywords": ["0106 biological sciences", "Carbon Sequestration", "mangroves", "ecological restoration", "systematic reviews", "land use", "15. Life on land", "coastal areas", "01 natural sciences", "Carbon", "mitigation", "Soil", "climate change", "carbon sinks", "13. Climate action", "Wetlands", "emission", "Ecosystem", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/gcb.14774"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.14774", "name": "item", "description": "10.1111/gcb.14774", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.14774"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-08-27T00:00:00Z"}}, {"id": "10.1111/gcb.14815", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:24Z", "type": "Journal Article", "created": "2019-08-30", "title": "How to measure, report and verify soil carbon change to realize the potential of soil carbon sequestration for atmospheric greenhouse gas removal", "description": "Abstract<p>There is growing international interest in better managing soils to increase soil organic carbon (SOC) content to contribute to climate change mitigation, to enhance resilience to climate change and to underpin food security, through initiatives such as international \uffe2\uff80\uff984p1000\uffe2\uff80\uff99 initiative and the FAO's Global assessment of SOC sequestration potential (GSOCseq) programme. Since SOC content of soils cannot be easily measured, a key barrier to implementing programmes to increase SOC at large scale, is the need for credible and reliable measurement/monitoring, reporting and verification (MRV) platforms, both for national reporting and for emissions trading. Without such platforms, investments could be considered risky. In this paper, we review methods and challenges of measuring SOC change directly in soils, before examining some recent novel developments that show promise for quantifying SOC. We describe how repeat soil surveys are used to estimate changes in SOC over time, and how long\uffe2\uff80\uff90term experiments and space\uffe2\uff80\uff90for\uffe2\uff80\uff90time substitution sites can serve as sources of knowledge and can be used to test models, and as potential benchmark sites in global frameworks to estimate SOC change. We briefly consider models that can be used to simulate and project change in SOC and examine the MRV platforms for SOC change already in use in various countries/regions. In the final section, we bring together the various components described in this review, to describe a new vision for a global framework for MRV of SOC change, to support national and international initiatives seeking to effect change in the way we manage our soils.</p>", "keywords": ["[SDE] Environmental Sciences", "550", "BULK-DENSITY", "QH301 Biology", "Climate", "[SDV]Life Sciences [q-bio]", "NEW-ZEALAND", "630", "Soil", "NE/M021327/1", "11. Sustainability", "SDG 13 - Climate Action", "AGRICULTURAL SOILS", "SDG 15 - Life on Land", "General Environmental Science", "agriculture", "2. Zero hunger", "Global and Planetary Change", "reporting", "Measurement", "Ecology", "IN-SITU", "Agricultura", "NE/P019455/1", "carbono org\u00e1nico del suelo", "Agriculture", "LAND-USE CHANGE", "04 agricultural and veterinary sciences", "[SDV] Life Sciences [q-bio]", "climate change", "Sustainability", "[SDE]Environmental Sciences", "Carbon Sequestration", "DIFFUSE-REFLECTANCE SPECTROSCOPY", "LONG-TERM EXPERIMENTS", "330", "Monitoring", "STOCK CHANGES", "MRV", "secuestro de carbon", "12. Responsible consumption", "QH301", "Greenhouse Gases", "ORGANIC-CARBON", "soil organic matter", "greenhouse gases", "Invited Research Reviews", "Environmental Chemistry", "774378", "SDG 2 - Zero Hunger", "European Commission", "resilience", "Climate Solutions", "Soil organic matter", "Soil organic carbon", "Natural Environment Research Council (NERC)", "Verification", "food security", "15. Life on land", "carbon sequestration", "Sustainable Agriculture", "Carbon", "EDDY-COVARIANCE", "soil organic carbon", "monitoring", "Reporting", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "measurement", "verification"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/gcb.14815"}, {"href": "https://scholarworks.uvm.edu/context/rsfac/article/1079/viewcontent/Lini2019b.pdf"}, {"href": "https://doi.org/10.1111/gcb.14815"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.14815", "name": "item", "description": "10.1111/gcb.14815", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.14815"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-10-06T00:00:00Z"}}, {"id": "10.1139/as-2020-0058", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:19:57Z", "type": "Journal Article", "created": "2022-02-18", "title": "Winters are changing: snow effects on Arctic and alpine tundra ecosystems", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p> Snow is an important driver of ecosystem processes in cold biomes. Snow accumulation determines ground temperature, light conditions, and moisture availability during winter. It also affects the growing season\u2019s start and end, and plant access to moisture and nutrients. Here, we review the current knowledge of the snow cover\u2019s role for vegetation, plant-animal interactions, permafrost conditions, microbial processes, and biogeochemical cycling. We also compare studies of natural snow gradients with snow experimental manipulation studies to assess time scale difference of these approaches. The number of tundra snow studies has increased considerably in recent years, yet we still lack a comprehensive overview of how altered snow conditions will affect these ecosystems. Specifically, we found a mismatch in the timing of snowmelt when comparing studies of natural snow gradients with snow manipulations. We found that snowmelt timing achieved by snow addition and snow removal manipulations (average 7.9\u00a0days advance and 5.5\u00a0days delay, respectively) were substantially lower than the temporal variation over natural spatial gradients within a given year (mean range 56\u00a0days) or among years (mean range 32\u00a0days). Differences between snow study approaches need to be accounted for when projecting snow dynamics and their impact on ecosystems in future climates. </p></article>", "keywords": ["snow experiment", "Ekologi", "tundra", "550", "Ecology", "Snow experiments", "ground temperatures", "review", "Review", "15. Life on land", "Climate Science", "Ground temperatures", "VDP::Mathematics and natural scienses: 400", "ground temperature", ":Matematikk og naturvitenskap: 400 [VDP]", ":Mathematics and natural scienses: 400 [VDP]", "ITEX", "13. Climate action", "VDP::Matematikk og naturvitenskap: 400::Zoologiske og botaniske fag: 480", "VDP::Mathematics and natural scienses: 400::Zoology and botany: 480", "14. Life underwater", "Tundra", "VDP::Matematikk og naturvitenskap: 400", "Klimatvetenskap", "snow experiments"]}, "links": [{"href": "https://cdnsciencepub.com/doi/pdf/10.1139/as-2020-0058"}, {"href": "https://doi.org/10.1139/as-2020-0058"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Arctic%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1139/as-2020-0058", "name": "item", "description": "10.1139/as-2020-0058", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1139/as-2020-0058"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-09-01T00:00:00Z"}}, {"id": "10.1111/pce.14143", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:50Z", "type": "Journal Article", "created": "2021-06-17", "title": "Convergent evolution of gene regulatory networks underlying plant adaptations to dry environments", "description": "<p>p1Plants transitioned from an aquatic to a terrestrial lifestyle during their evolution. On land, fluctuations on water availability in the environment became one of the major problems they encountered. The appearance of morpho-physiological adaptations to cope with and tolerate water loss from the cells was undeniably useful to survive on dry land. Some of these adaptations, such as carbon concentrating mechanisms (CCMs), desiccation tolerance (DT) and root impermeabilization, appeared in multiple plant lineages. Despite being crucial for evolution on land, it has been unclear how these adaptations convergently evolved in the various plant lineages. Recent advances on whole genome and transcriptome sequencing are revealing that co-option of genes and gene regulatory networks (GRNs) is a common feature underlying the convergent evolution of these adaptations. In this review we address how the study of CCMs and DT have provided insight into convergent evolution of GRNs underlying plant adaptation to dry environments, and how these insights could be applied to currently emerging understanding of evolution of root impermeabilization through different barrier cell types. We discuss examples of co-option, conservation, and innovation of genes and GRNs at the cell, tissue and organ levels revealed by recent phylogenomic (comparative genomic) and comparative transcriptomic studies.</p>", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Physiology", "desiccation tolerance", "exodermis", "Adaptation", " Biological", "Reviews", "Plant Science", "comparative genomics", "Plants", "15. Life on land", "Genes", " Plant", "Biological Evolution", "03 medical and health sciences", "apoplastic barriers", "Gene Regulatory Networks", "Desert Climate"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/pce.14143"}, {"href": "https://doi.org/10.1111/pce.14143"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%2C%20Cell%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/pce.14143", "name": "item", "description": "10.1111/pce.14143", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/pce.14143"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-06-17T00:00:00Z"}}, {"id": "10.1111/pce.14205", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-30T16:19:51Z", "type": "Journal Article", "created": "2021-10-30", "title": "Root dynamic growth strategies in response to salinity", "description": "Abstract<p>Increasing soil salinization largely impacts crop yield worldwide. To deal with salinity stress, plants exhibit an array of responses, including root system architecture remodelling. Here, we review recent progress in physiological, developmental and cellular mechanisms of root growth responses to salinity. Most recent research in modulation of root branching, root tropisms, as well as in root cell wall modifications under salinity stress, is discussed in the context of the contribution of these responses to overall plant performance. We highlight the power of natural variation approaches revealing novel potential pathways responsible for differences in root salt stress responses. Together, these new findings promote our understanding of how salt shapes the root phenotype, which may provide potential avenues for engineering crops with better yield and survival in saline soils.</p", "keywords": ["Crops", " Agricultural", "0301 basic medicine", "2. Zero hunger", "Salinity", "0303 health sciences", "growth", "Special Issue Reviews", "Salt Tolerance", "15. Life on land", "Plant Roots", "gravitropism", "salinity", "Soil", "03 medical and health sciences", "genome-wide association studies (GWAS)", "development"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/pce.14205"}, {"href": "https://doi.org/10.1111/pce.14205"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%2C%20Cell%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/pce.14205", "name": "item", "description": "10.1111/pce.14205", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/pce.14205"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-11-17T00:00:00Z"}}, {"id": "10.1128/msystems.00495-19", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:56Z", "type": "Journal Article", "created": "2020-04-13", "title": "Energetic Basis of Microbial Growth and Persistence in Desert Ecosystems", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Microbial life is surprisingly abundant and diverse in global desert ecosystems. In these environments, microorganisms endure a multitude of physicochemical stresses, including low water potential, carbon and nitrogen starvation, and extreme temperatures. In this review, we summarize our current understanding of the energetic mechanisms and trophic dynamics that underpin microbial function in desert ecosystems. Accumulating evidence suggests that dormancy is a common strategy that facilitates microbial survival in response to water and carbon limitation.</p></article>", "keywords": ["0301 basic medicine", "dormancy", "CYANOBACTERIAL EXOPOLYSACCHARIDES", "Trace gas", "Microbiology", "SOIL CRUSTS", "Energy reserve", "HIGH-AFFINITY", "03 medical and health sciences", "trace gas", "ATMOSPHERIC TRACE GASES", "Energetics", "energy reserve", "Dormancy", "SOR RONDANE MOUNTAINS", "Desert", "Photosynthesis", "106026 Ecosystem research", "CARBON-MONOXIDE", "desert", "ATACAMA DESERT", "energetics", "2. Zero hunger", "106022 Mikrobiologie", "0303 health sciences", "photosynthesis", "COMMUNITY RESPONSE", "15. Life on land", "QR1-502", "106026 \u00d6kosystemforschung", "DRY SOIL", "13. Climate action", "MOLECULAR-HYDROGEN", "106022 Microbiology", "Minireview"]}, "links": [{"href": "https://journals.asm.org/doi/pdf/10.1128/mSystems.00495-19"}, {"href": "https://doi.org/10.1128/msystems.00495-19"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/mSystems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1128/msystems.00495-19", "name": "item", "description": "10.1128/msystems.00495-19", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1128/msystems.00495-19"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-04-28T00:00:00Z"}}, {"id": "10.1128/msystems.00803-19", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-30T16:19:56Z", "type": "Journal Article", "created": "2020-04-20", "title": "Soil Microbial Biogeography in a Changing World: Recent Advances and Future Perspectives", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Soil microbial communities are fundamental to maintaining key soil processes associated with litter decomposition, nutrient cycling, and plant productivity and are thus integral to human well-being. Recent technological advances have exponentially increased our knowledge concerning the global ecological distributions of microbial communities across space and time and have provided evidence for their contribution to ecosystem functions. However, major knowledge gaps in soil biogeography remain to be addressed over the coming years as technology and research questions continue to evolve.</p></article>", "keywords": ["0301 basic medicine", "2. Zero hunger", "future perspectives", "0303 health sciences", "soil microbial biogeography", "recent advances", "15. Life on land", "Microbiology", "QR1-502", "3. Good health", "03 medical and health sciences", "13. Climate action", "XXXXXX - Unknown", "Minireview"]}, "links": [{"href": "https://doi.org/10.1128/msystems.00803-19"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/mSystems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1128/msystems.00803-19", "name": "item", "description": "10.1128/msystems.00803-19", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1128/msystems.00803-19"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-04-28T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Review&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Review&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Review&", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=Review&offset=50", "hreflang": "en-US"}], "numberMatched": 172, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-05-30T19:08:47.054439Z"}