{"type": "FeatureCollection", "features": [{"id": "10.1016/j.agrformet.2025.110503", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:15:21Z", "type": "Journal Article", "created": "2025-03-18", "title": "Linking soil extracellular enzymes with soil respiration under altered litter inputs", "description": "<p>Climate and land-use changes have altered both litter quality and quantity, with cascading impacts on soil respiration (SR). Soil extracellular enzymes (EEs) like cellulase and ligninase are crucial for deconstructing plant litter because they convert polymers into monomers. However, whether and how changes in litter inputs influence soil cellulase and ligninase activities as well as the implications for SR remain poorly understood. We conducted a global meta-analysis of 827 observations on the responses of SR and soil cellulase and ligninase activities to litter addition and litter removal. Litter addition significantly increased cellulase activity by 25 %, whereas litter removal decreased it by 26 %. Neither litter addition nor litter removal affected ligninase activity. Changes in cellulase activity correlated positively with SR under both litter addition and litter removal, but no such relationship was found for ligninase activity. These results indicate that changes in litter inputs affect SR primarily by affecting the microbial decomposition of readily decomposable rather than more structurally complex carbon pools. In addition, the effects of changes in litter inputs on cellulase activity decreased with treatment duration, suggesting that the long-term effects of changes in litter inputs on SR might be smaller than previously thought. Our results underscore the dominant role of cellulase in mediating the responses of SR to altered litter inputs. Integrating cellulase responses to altered litter inputs into Earth system models could improve the representation of microbial processes and refine the predictions of soil carbon dynamics.</p>", "keywords": ["Soil carbon pools", "Litter alternations", "Soil respiration", "Global changes", "Soil extracellular enzymes", "Soil microorganisms"]}, "links": [{"href": "https://doi.org/10.1016/j.agrformet.2025.110503"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Forest%20Meteorology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agrformet.2025.110503", "name": "item", "description": "10.1016/j.agrformet.2025.110503", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agrformet.2025.110503"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-01T00:00:00Z"}}, {"id": "10.1007/s00374-011-0539-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:14:18Z", "type": "Journal Article", "created": "2011-01-18", "title": "Effects Of Organic And Inorganic Fertilization On Soil Bacterial And Fungal Microbial Diversity In The Kabete Long-Term Trial, Kenya", "description": "The effects of crop manure and inorganic fertilizers on composition of microbial communities of central high land soils of Kenya are poorly known. For this reason, we have carried out a thirty-two-year-old long-term trial in Kabete, Kenya. These soils were treated with organic (maize stover (MS) at 10 t ha\u22121, farmyard manure (FYM) at 10 t ha\u22121) and inorganic fertilizers 120 kg N, 52.8 kg P (N2P2), N2P2 + MS, N2P2 + FYM, a control, and a fallow for over 30 years. We examined 16S rRNA gene and 28S rRNA gene fingerprints of bacterial and fungal diversity by PCR amplification and denaturing gradient gel electrophoresis separation, respectively. The PCR bacterial community structure and diversity were negatively affected by N2P2 and were more closely related to the bacterial structure in the soils without any addition (control) than that of soils with a combination of inorganic and organic or inorganic fertilizers alone. The effect on fungal diversity by N2P2 was different than the effect on bacterial diversity since the fungal diversity was similar to that of the N2P2 + FYM and N2P2 + MS-treated. However, soils treated with organic inputs clustered away from soils amended with inorganic inputs. Organic inputs had a positive effect on both bacterial and fungal diversity with or without chemical fertilizers. Results from this study suggested that total diversity of bacterial and fungal communities was closely related to agro-ecosystem management practices and may partially explain the yield differences observed between the different treatments.", "keywords": ["[SDV.SA]Life Sciences [q-bio]/Agricultural sciences", "Microbial diversity", "soil microorganisms", "engrais organique", "http://aims.fao.org/aos/agrovoc/c_27870", "Organic and inorganic amendments", "F08 - Syst\u00e8mes et modes de culture", "rendement des cultures", "630", "fertilisation", "biodiversit\u00e9", "http://aims.fao.org/aos/agrovoc/c_4592", "http://aims.fao.org/aos/agrovoc/c_36669", "http://aims.fao.org/aos/agrovoc/c_2018", "inorganic fertilizers", "http://aims.fao.org/aos/agrovoc/c_10795", "http://aims.fao.org/aos/agrovoc/c_34326", "fertility", "2. Zero hunger", "[SDV.SA] Life Sciences [q-bio]/Agricultural sciences", "http://aims.fao.org/aos/agrovoc/c_33949", "g\u00e9n\u00e9tique des populations", "04 agricultural and veterinary sciences", "agro\u00e9cosyst\u00e8me", "6. Clean water", "fertilit\u00e9 du sol", "PCR", "http://aims.fao.org/aos/agrovoc/c_34079", "polymerization", "community structure", "abonos inorg\u00e1nicos", "management", "570", "http://aims.fao.org/aos/agrovoc/c_7170", "http://aims.fao.org/aos/agrovoc/c_7172", "flore microbienne", "soil", "http://aims.fao.org/aos/agrovoc/c_36167", "micro-organisme du sol", "http://aims.fao.org/aos/agrovoc/c_10176", "organic fertilizers", "abonos org\u00e1nicos", "pratique culturale", "microorganismos del suelo", "suelo", "flore du sol", "P35 - Fertilit\u00e9 du sol", "P34 - Biologie du sol", "polimerizaci\u00f3n", "15. Life on land", "engrais min\u00e9ral", "http://aims.fao.org/aos/agrovoc/c_16367", "http://aims.fao.org/aos/agrovoc/c_4086", "0401 agriculture", " forestry", " and fisheries", "F04 - Fertilisation"]}, "links": [{"href": "https://doi.org/10.1007/s00374-011-0539-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biology%20and%20Fertility%20of%20Soils", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s00374-011-0539-3", "name": "item", "description": "10.1007/s00374-011-0539-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s00374-011-0539-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-01-19T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2021.108357", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:16:58Z", "type": "Journal Article", "created": "2021-07-10", "title": "A critical perspective on interpreting amplicon sequencing data in soil ecological research", "description": "Abstract   Microbial community analysis via marker gene amplicon sequencing has become a routine method in the field of soil research. In this perspective, we discuss technical challenges and limitations of amplicon sequencing and present statistical and experimental approaches that can help addressing the spatio-temporal complexity of soil and the high diversity of organisms therein. We illustrate the impact of compositionality on the interpretation of relative abundance data and discuss effects of sample replication on the statistical power in soil community analysis. Additionally, we argue for the need of increased study reproducibility and data availability, as well as complementary techniques for generating deeper ecological insights into microbial roles and our understanding thereof in soil ecosystems. At this stage, we call upon researchers and specialized soil journals to consider the current state of data analysis, interpretation, and availability to improve the rigor of future studies.", "keywords": ["2. Zero hunger", "0301 basic medicine", "Soil microbial diversity", "0303 health sciences", "Soil metabarcoding", "DIVERSITY", "Ecology; Soil microbes; Amplicon sequencing", "Compositional data", "SCALE SPATIAL HETEROGENEITY", "15. Life on land", "BIOMASS", "03 medical and health sciences", "106026 \u00d6kosystemforschung", "Soil complexity", "CARBON-USE EFFICIENCY", "BACTERIA", "DNA EXTRACTION", "MICROORGANISMS", "MICROBIAL COMMUNITIES", "106026 Ecosystem research", "RIBOSOMAL-RNA", "Amplicon sequencing", "Soil microorganisms", "GENERATION"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2021.108357"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2021.108357", "name": "item", "description": "10.1016/j.soilbio.2021.108357", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2021.108357"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-01T00:00:00Z"}}, {"id": "10.1071/sr21268", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:17:59Z", "type": "Journal Article", "created": "2022-01-18", "title": "Lessons from a landmark 1991 article on soil structure: distinct precedence of non-destructive assessment and benefits of fresh perspectives in soil research", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>In 1991, at the launch of a national symposium devoted to soil structure, the Australian Society of Soil Science invited Professor John Letey to deliver a keynote address, which was later published in the society\u2019s journal. In his lecture, he shared the outcome of his reflexion about what the assessment of soil structure should amount to, in order to produce useful insight into the functioning of soils. His viewpoint was that the focus should be put on the openings present in the structure, rather than on the chunks of material resulting from its mechanical dismantlement. In the present article, we provide some historical background for Letey\u2019s analysis, and try to explain why it took a number of years for the paradigm shift that he advocated to begin to occur. Over the last decade, his perspective that soil structure needs to be characterised via non-destructive methods appears to have gained significant momentum, which is likely to increase further in the near future, as we take advantage of recent technological advances. Other valuable lessons that one can derive from Letey\u2019s pioneering article relate to the extreme value for everyone, even neophytes, to constantly ask questions about where research on given topics is heading, what its goals are, and whether the methods that are used at a certain time are optimal.</p></article>", "keywords": ["570", "soil image analysis", "soil microorganisms", "[SDE.MCG]Environmental Sciences/Global Changes", "Soil measuring", "earthworms", "micromorphology", "Aggregate stability", "Soil functions", "01 natural sciences", "630", "Soil fauna", "soil organic matter", "Earthworms", "Micromorphology", "Computed tomography", "aggregate stability", "0105 earth and related environmental sciences", "soil measuring", "2. Zero hunger", "Soil organic matter", "computed tomography", "04 agricultural and veterinary sciences", "soil functions", "15. Life on land", "[SDE.MCG] Environmental Sciences/Global Changes", "Soil image analysis", "0401 agriculture", " forestry", " and fisheries", "soil fauna", "earthworms; micromorphology", "Soil microorganisms"]}, "links": [{"href": "https://doi.org/10.1071/sr21268"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1071/sr21268", "name": "item", "description": "10.1071/sr21268", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1071/sr21268"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-19T00:00:00Z"}}, {"id": "10.1029/2003gb002137", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:17:29Z", "type": "Journal Article", "created": "2004-01-25", "title": "Soil Microbial Activity And N Availability With Elevated Co2in Mojave Desert Soils", "description": "<p>We examined the effects of elevated CO2 on soil nitrogen (N) dynamics in the Mojave Desert by measuring plant N isotope composition (\uffce\uffb415N), soil microbial biomass N, soil respiration, resin\uffe2\uff80\uff90available N, and C and N dynamics during soil incubations. With elevated CO2, foliage of Larrea tridentata and Krameria erecta had mean \uffce\uffb415N 2.1 and 1.1\uffe2\uff80\uffb0 higher with elevated CO2, respectively, and elevated CO2 increased microbial biomass N in dry soils under a perennial grass (6.8 \uffc2\uffb1 1.4 versus 3.7 \uffc2\uffb1 0.3 \uffce\uffbcg/g). Elevated CO2 significantly increased cumulative resin\uffe2\uff80\uff90available N in the field by 12%, driven by available soil moisture. Rates of soil respiration with elevated CO2 were sporadically higher under Pleuraphis and Larrea. Soils under shrubs had greater potential net N mineralization (102.6 \uffc2\uffb1 24.2 \uffce\uffbcg/g) than soils under grasses and in plant interspaces (40.0 \uffc2\uffb1 9.69 \uffce\uffbcg/g). Rates of recalcitrant N turnover in soil incubations were related to soil substrate availability. Results indicate that shifts in soil microbial structure and/or activity may occur with elevated CO2 and may result in increases in plant\uffe2\uff80\uff90available N when soil moisture is available.</p>", "keywords": ["2. Zero hunger", "0106 biological sciences", "elevated CO2", "570", "soil microorganisms", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "630"]}, "links": [{"href": "https://doi.org/10.1029/2003gb002137"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Biogeochemical%20Cycles", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1029/2003gb002137", "name": "item", "description": "10.1029/2003gb002137", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1029/2003gb002137"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-01-24T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2010.02196.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:18:48Z", "type": "Journal Article", "created": "2010-02-05", "title": "Nitrogen Deposition, Vegetation Burning And Climate Warming Act Independently On Microbial Community Structure And Enzyme Activity Associated With Decomposing Litter In Low-Alpine Heath", "description": "Abstract<p>Low\uffe2\uff80\uff90alpine heathlands are thought to be particularly sensitive to nitrogen (N) deposition, climate and land management change, yet little is known about how these factors regulate key belowground processes, like litter turnover, under field conditions. Here we use an in situ factorial field experiment to test the effects of increased atmospheric N deposition, climate manipulation and past vegetation burning, and their interactions, on litter decomposition and the activity and diversity of associated microorganisms. The use of litter from within (native) and outwith (standard) the experimental plots also enabled us to test whether decomposition and microbial functional diversity is driven primarily by soil conditions or litter chemistry. In general, extracellular enzyme activities of litter were driven by additions of simulated N deposition with phosphatase being the most responsive. We found that standard litter incubated in plots that had been burnt 8 years previously decomposed slower and lost less N and phosphorus than in unburnt plots. This material also had associated with it the greatest activity of glucosidase and the least diverse microbial community, as assessed by culture\uffe2\uff80\uff90independent methods. Although all treatments significantly affected microbial diversity, burning explained most of the variability, indicating a close coupling between plant and microbial communities in these treatments. A striking feature of all the data relating to both standard and native litter was an almost complete lack of interactive effects between the treatments. The lack of interactions between the treatments indicates that each perturbation might affect different mechanisms in the decomposition process (including the composition of associated microbial communities) and nutrient cycling.</p>", "keywords": ["climate change", "enzyme activities", "soil microorganisms", "soil bacteria", "13. Climate action", "microbial diversity", "soil fungi", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "carbon turnover", "15. Life on land"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2010.02196.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2010.02196.x", "name": "item", "description": "10.1111/j.1365-2486.2010.02196.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2010.02196.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-02-05T00:00:00Z"}}, {"id": "10.1890/03-5055", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:19:52Z", "type": "Journal Article", "created": "2007-06-06", "title": "Soil Nitrogen Cycling Under Elevated Co2: A Synthesis Of Forest Face Experiments", "description": "<p>The extent to which greater net primary productivity (NPP) will be sustained as the atmospheric CO2 concentration increases will depend, in part, on the long\uffe2\uff80\uff90term supply of N for plant growth. Over a two\uffe2\uff80\uff90year period, we used common field and laboratory methods to quantify microbial N, gross N mineralization, microbial N immobilization, and specific microbial N immobilization in three free\uffe2\uff80\uff90air CO2 enrichment experiments (Duke Forest, Oak Ridge, Rhinelander). In these experiments, elevated atmospheric CO2 has increased the input of above\uffe2\uff80\uff90 and belowground litter production, which fuels heterotrophic metabolism in soil. Nonetheless, we found no effect of atmospheric CO2 concentration on any microbial N cycling pool or process, indicating that greater litter production had not initially altered the microbial supply of N for plant growth. Thus, we have no evidence that changes in plant litter production under elevated CO2 will initially slow soil N availability and produce a negative feedback on NPP. Understanding the time scale over which greater plant production modifies microbial N demand lies at the heart of our ability to predict long\uffe2\uff80\uff90term changes in soil N availability and hence whether greater NPP will be sustained in a CO2\uffe2\uff80\uff90enriched atmosphere.</p>", "keywords": ["2. Zero hunger", "0106 biological sciences", "elevated CO2", "soil microorganisms", "Science", "Ecology and Evolutionary Biology", "microbial immobilization", "04 agricultural and veterinary sciences", "soil N cycling", "15. Life on land", "01 natural sciences", "6. Clean water", "climate change", "gross N mineralization", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "forest FACE experiments", "Forest Sciences"]}, "links": [{"href": "https://doi.org/10.1890/03-5055"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Applications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1890/03-5055", "name": "item", "description": "10.1890/03-5055", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1890/03-5055"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2003-12-01T00:00:00Z"}}, {"id": "10.2307/2640985", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:28Z", "type": "Journal Article", "created": "2006-04-17", "description": "Elevated atmospheric CO2 has the potential to increase the production and alter the chemistry of organic substrates entering soil from plant production, the magnitude of which is constrained by soil-N availability. Because microbial growth in soil is limited by substrate inputs from plant production, we reasoned that changes in the amount and chemistry of these organic substrates could affect the composition of soil microbial com- munities and the cycling of N in soil. We studied microbial community composition and soil-N transformations beneath Populus tremuloides Michx. growing under experimental atmospheric CO2 (35.7 and 70.7 Pa) and soil-N-availability (low N 5 61 ng N\u00b7g 21 \u00b7d 21 and high N 5 319 ng N\u00b7g 21 \u00b7d 21 ) treatments. Atmospheric CO2 concentration was modified in large, open-top chambers, and we altered soil-N availability in open-bottom root boxes by mixing different proportions of A and C horizon material. We used phospholipid fatty-acid analysis to gain insight into microbial community composition and coupled this analysis to measurements of soil-N transformations using 15 N-pool dilution techniques. The infor- mation presented here is part of an integrated experiment designed to elucidate the phys- iological mechanisms controlling the flow of C and N in the plant-soil system. Our ob- jectives were (1) to determine whether changes in plant growth and tissue chemistry alter microbial community composition and soil-N cycling in response to increasing atmospheric CO2 and soil-N availability and (2) to integrate the results of our experiment into a synthesis of elevated atmospheric CO2 and the cycling of C and N in terrestrial ecosystems. After 2.5 growing seasons, microbial biomass, gross N mineralization, microbial im- mobilization, and nitrification (gross and net) were equivalent at ambient and elevated CO2, suggesting that increases in fine-root production and declines in fine-root N concentration were insufficient to alter the influence of native soil organic matter on microbial physiology; this was the case in both low- and high-N soil. Similarly, elevated CO2 did not alter the proportion of bacterial, actinomycetal, or fungal phospholipid fatty acids in low-N or high-N soil, indicating that changes in substrate input from greater plant growth under elevated CO2 did not alter microbial community composition. Our results differ from a substantial number of studies reporting increases and decreases in soil-N cycling under elevated CO 2. From our analysis, it appears that soil-N cycling responds to elevated atmospheric CO 2 in experimental situations where plant roots have fully colonized the soil and root-associated C inputs are sufficient to modify the influence of native soil organic matter on microbial physiology. In young developing ecosystems where plant roots have not fully exploited the soil, microbial metabolism appears to be regulated by relatively large pools of soil organic matter, rather than by the additional input of organic substrates under elevated CO 2.", "keywords": ["measurement-", "soil microorganisms", "Ecology and Evolutionary Biology", "nitrogen-: cycling-", "feedback", "microbial community composition", "techniques-", "Environmental-Sciences)", "01 natural sciences", "litter-plant", "biomass-", "gross and net", "124-38-9: CARBON DIOXIDE", "Spermatophytes-", "cycling-", "soil-organic-matter", "mineralization", "Spermatophyta-", "responses-", "phospholipid-fatty-acids", "2. Zero hunger", "Climatology- (Environmental-Sciences)", "Angiosperms-", "Angiospermae-", "Plants-", "global climate change", "microbial immobilization", "nutrient-", "Soil-Science", "6. Clean water", "metabolism-", "soil-N transformations", "transformation-", "substrates-", "7727-37-9: NITROGEN", "atmosphere-", "elevated atmospheric", "570", "nitrification-", "nitrogen immobilization", "Science", "Vascular-Plants", "poplars-", "phospholipid fatty acids (PFLAs)", "carbon-dioxide", "growth-", "soil-microbial-community-composition", "Salicaceae-: Dicotyledones-", "microbial-flora", "Populus tremuloides", "Plantae-", "organic-matter", "consortia-", "0105 earth and related environmental sciences", "communities-", "ecosystem", "analysis-", "atmospheric CO2 and soil-N availability", "soil-availability", "mineralization-", "carbon dioxide", "fatty-acids", "15. Life on land", "substrate-input", "Populus-tremuloides (Salicaceae-)", "13. Climate action", "roots-", "Terrestrial-Ecology (Ecology-", "composition-", "Dicots-", "immobilization-", "seasons-", "ecosystems-"], "contacts": [{"organization": "Zak, Donald R., Pregitzer, Kurt S., Curtis, Peter S., Holmes, William E.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.2307/2640985"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Applications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2307/2640985", "name": "item", "description": "10.2307/2640985", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2307/2640985"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2000-02-01T00:00:00Z"}}, {"id": "10.3390/agronomy12040767", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:48Z", "type": "Journal Article", "created": "2022-03-23", "title": "Conception and Development of Recycled Raw Materials (Coconut Fiber and Bagasse)-Based Substrates Enriched with Soil Microorganisms (Arbuscular Mycorrhizal Fungi, Trichoderma spp. and Pseudomonas spp.) for the Soilless Cultivation of Tomato (S. lycopersicum)", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>The global production quantity and the utilisation area harvested for the cultivation of tomatoes have significantly increased in the last three decades. Europe still plays an important role in the production of tomatoes, accounting for 12% of global production in 2020. Tomato production can be divided into greenhouse/soilless production and open field production. Greenhouse/soilless tomato production is mostly developed in northern Europe, and open field production in southern Europe. Soilless cultivation serves to improve control of the growing medium and to avoid any likely problems for watering and maintaining proper nutrient concentrations. Beneficial soil microorganisms, particularly arbuscular mycorrhizal fungi (AMF), are increasingly being recognized as key elements of an agro-ecological approach to agricultural production. The use of these beneficial microorganisms on soilless tomato production may improve plant performance and reduce biotic and abiotic stress occurring during production with a consequent decrease of chemicals and increase of sustainability of the production system. In this paper, we tested different substrates composed of coconut fiber and bagasse (S1 to S4) and beneficial microorganisms (AMF, Pseudomonas fluorescens and Trichoderma harzianum), selecting the most suitable system for the soilless production of tomatoes. Our results showed that substrates S1 (100% coconut fiber) and S2 (66% coconut fiber + 33% bagasse) complementarily used with the consortium of \u201cAMF IP21 + Trichoderma harzianum + Pseudomonas fluorescens IPB04\u201d seem to be the \u201cbest formulation\u201d for this purpose. That confirmed the feasibility of the development of recycled material (coconut fiber and bagasse)-based substrates together with soil microorganisms (AMF and beneficial bacteria) for soilless tomato production.</p></article>", "keywords": ["2. Zero hunger", "0106 biological sciences", "growing substrates", "S", "0401 agriculture", " forestry", " and fisheries", "Agriculture", "04 agricultural and veterinary sciences", "tomato", "15. Life on land", "01 natural sciences", "beneficial soil microorganisms", "tomato; beneficial soil microorganisms; growing substrates", "12. Responsible consumption"], "contacts": [{"organization": "Masquelier, Sylvie, Sozzi, Tommaso, Bouvet, Janie Camille, B\u00e9siers, J\u00e9r\u00f4me, Deogratias, Jean-Marc,", "roles": ["creator"]}]}, "links": [{"href": "http://www.mdpi.com/2073-4395/12/4/767/pdf"}, {"href": "https://www.mdpi.com/2073-4395/12/4/767/pdf"}, {"href": "https://doi.org/10.3390/agronomy12040767"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/agronomy12040767", "name": "item", "description": "10.3390/agronomy12040767", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/agronomy12040767"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-03-23T00:00:00Z"}}, {"id": "10.3390/f7050108", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:20:51Z", "type": "Journal Article", "created": "2016-05-24", "title": "Changes Of Chemical And Biological Properties Of Distinct Forest Floor Layers After Wood Ash Application In A Norway Spruce Stand", "description": "<p>The effect of wood ash (WA) fertilisation on chemical and biological properties of forest floor layers was studied in a Norway spruce (Picea abies (L.) Karst.) stand in the central part of Slovakia at an altitude of 1300 m above sea level. In the forest floor, litter (OL), fragmented (OF), and humic (OH) horizons with average thickness of 1.5, 2, and 4 cm, respectively, could be distinguished. Three replicates of two wood ash treatments (3 and 6 t\uffc2\uffb7ha\uffe2\uff88\uff921) and a control were established in the autumn of 2012. Soil samples from OL, OF, OH and A-horizon were taken 0.5, 1, 6 and 12 months after the WA application. In soil samples chemical (pH, C and N content, C:N ratio, concentration of exchangeable Ca, Mg and K) and microbial properties (basal respiration, catalase activity, structure of microbial community based on BIOLOG assay) were determined. Our results showed that the changes in microbial and chemical properties do not occur simultaneously in particular horizons. WA application in autumn lead to a significant increase in pH, base cation concentration, and distinct losses in C and N content in the OL layer in the first month; however, at the beginning of the vegetation period, the most pronounced effect of WA was observed in OF and especially OH horizons; no changes were found in the A-horizon. Different properties of particular forest floor horizons led to a vertical stratification of the microbial community. Each forest floor horizon had particular properties, leading to a vertical stratification of the microbial community; deeper horizons had more homogenous functional groups.</p>", "keywords": ["13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "14. Life underwater", "15. Life on land", "surface organic layer; fertilisation; soil properties; soil microorganisms"]}, "links": [{"href": "http://www.mdpi.com/1999-4907/7/5/108/pdf"}, {"href": "https://doi.org/10.3390/f7050108"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Forests", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/f7050108", "name": "item", "description": "10.3390/f7050108", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/f7050108"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-05-21T00:00:00Z"}}, {"id": "10.5281/zenodo.6922620", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:25Z", "type": "Report", "title": "Soil microorganisms under changing environment. Changes in soil microbial functional diversity across European field crop farms are mostly driven by environmental variables", "description": "Soil microorganisms under changing environment. Changes in soil microbial functional diversity across European field crop farms are mostly driven by environmental variables This work was funded by the European Commission Horizon 2020 project SoildiverAgro [grant agreement 817819].", "keywords": ["2. Zero hunger", "Soil", "13. Climate action", "15. Life on land", "Microbial function", "Soil microorganisms"], "contacts": [{"organization": "Lloret, Eva", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6922620"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6922620", "name": "item", "description": "10.5281/zenodo.6922620", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6922620"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "10.5281/zenodo.6922621", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:25Z", "type": "Report", "title": "Soil microorganisms under changing environment. Changes in soil microbial functional diversity across European field crop farms are mostly driven by environmental variables", "description": "Soil microorganisms under changing environment. Changes in soil microbial functional diversity across European field crop farms are mostly driven by environmental variables This work was funded by the European Commission Horizon 2020 project SoildiverAgro [grant agreement 817819].", "keywords": ["2. Zero hunger", "Soil", "13. Climate action", "15. Life on land", "Microbial function", "Soil microorganisms"], "contacts": [{"organization": "Lloret, Eva", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.6922621"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.6922621", "name": "item", "description": "10.5281/zenodo.6922621", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.6922621"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "10.5424/sjar/2016142-8395", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:23:42Z", "type": "Journal Article", "created": "2016-06-01", "description": "<p>Agricultural systems where monoculture prevails are characterized by fertility losses and reduced contribution to ecosystem services. Including cover crops (CC) as part of an agricultural system is a promising choice in sustainable intensification of those demanding systems. We evaluated soil microbial functionality in cash crops in response to the inclusion of CC by analyzing soil microbial functions at two different periods of the agricultural year (cash crop harvest and CC desiccation) during 2013 and 2014. Three plant species were used as CC: oat (Avena sativa L.), vetch (Vicia sativa L.) and radish (Raphanus sativus L.) which were sown in two different mixtures of species: oat and radish mix (CC1) and oat, radish and vetch mix (CC2), with soybean monoculture and soybean/corn being the cash crops. The study of community level physiological profiles showed statistical differences in respiration of specific C sources indicating an improvement of catabolic diversity in CC treatments. Soil enzyme activities were also increased with the inclusion of CC mixtures, with values of dehydrogenase activity and fluorescein diacetate hydrolysis up to 38.1% and 35.3% higher than those of the control treatment, respectively. This research evidenced that CC inclusion promotes soil biological quality through a contribution of soil organic carbon, improving the sustainability of agrosystems. The use of a CC mixture of three plant species including the legume vetch increased soil biological processes and catabolic diversity, with no adverse effects on cash crop grain yield.</p>", "keywords": ["diversification", "Plantas de Cobertura", "Soil Microorganisms", "enzymes", "Agricultural environment and ecology", "microorganisms; soil functionality; sustainability; diversification; enzymes", "SUSTAINABILITY", "https://purl.org/becyt/ford/1.5", "Microorganismos del Suelo", "11. Sustainability", "https://purl.org/becyt/ford/4.1", "MICROORGANISMS", "https://purl.org/becyt/ford/4", "https://purl.org/becyt/ford/1", "microorganisms", "2. Zero hunger", "S", "Agriculture", "Soil Biology", "04 agricultural and veterinary sciences", "15. Life on land", "sustainability", "Sostenibilidad", "Sustainability", "SOIL FUNCTIONALITY", "0401 agriculture", " forestry", " and fisheries", "DIVERSIFICATION", "soil functionality", "ENZYMES", "Biolog\u00eda del Suelo", "Cover Plants"]}, "links": [{"href": "https://doi.org/10.5424/sjar/2016142-8395"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Spanish%20Journal%20of%20Agricultural%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5424/sjar/2016142-8395", "name": "item", "description": "10.5424/sjar/2016142-8395", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5424/sjar/2016142-8395"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-06-01T00:00:00Z"}}, {"id": "10261/259704", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:24:30Z", "type": "Journal Article", "created": "2022-01-18", "title": "Lessons from a landmark 1991 article on soil structure: distinct precedence of non-destructive assessment and benefits of fresh perspectives in soil research", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>In 1991, at the launch of a national symposium devoted to soil structure, the Australian Society of Soil Science invited Professor John Letey to deliver a keynote address, which was later published in the society\u2019s journal. In his lecture, he shared the outcome of his reflexion about what the assessment of soil structure should amount to, in order to produce useful insight into the functioning of soils. His viewpoint was that the focus should be put on the openings present in the structure, rather than on the chunks of material resulting from its mechanical dismantlement. In the present article, we provide some historical background for Letey\u2019s analysis, and try to explain why it took a number of years for the paradigm shift that he advocated to begin to occur. Over the last decade, his perspective that soil structure needs to be characterised via non-destructive methods appears to have gained significant momentum, which is likely to increase further in the near future, as we take advantage of recent technological advances. Other valuable lessons that one can derive from Letey\u2019s pioneering article relate to the extreme value for everyone, even neophytes, to constantly ask questions about where research on given topics is heading, what its goals are, and whether the methods that are used at a certain time are optimal.</p></article>", "keywords": ["570", "soil image analysis", "soil microorganisms", "[SDE.MCG]Environmental Sciences/Global Changes", "Soil measuring", "earthworms", "micromorphology", "Aggregate stability", "Soil functions", "01 natural sciences", "630", "Soil fauna", "soil organic matter", "Earthworms", "Micromorphology", "Computed tomography", "aggregate stability", "0105 earth and related environmental sciences", "soil measuring", "2. Zero hunger", "Soil organic matter", "computed tomography", "04 agricultural and veterinary sciences", "soil functions", "15. Life on land", "[SDE.MCG] Environmental Sciences/Global Changes", "Soil image analysis", "0401 agriculture", " forestry", " and fisheries", "soil fauna", "earthworms; micromorphology", "Soil microorganisms"]}, "links": [{"href": "https://doi.org/10261/259704"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10261/259704", "name": "item", "description": "10261/259704", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10261/259704"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-19T00:00:00Z"}}, {"id": "10261/407328", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:24:36Z", "type": "Dataset", "title": "HARVEST Project Dataset-France Apple Orchard Soil biological and chemical parameters (2019\u20132020) [Dataset]", "description": "Embargo[ES] Este conjunto de datos incluye informaci\u00f3n qu\u00edmica y biol\u00f3gica del suelo recolectada en un campo de manzanos manejado bajo dos sistemas (Ecol\u00f3gico y Manejo Integrado de Plagas) y tres modalidades de cubierta en las calles (Control, Cubierta de gram\u00edneas, Cubierta de gram\u00edneas y leguminosas). Las mediciones incluyen biomasa microbiana del suelo, propiedades qu\u00edmicas del suelo, colonizaci\u00f3n por hongos micorr\u00edcicos arbusculares (AMF), perfiles catab\u00f3licos microbianos del suelo y la estructura y taxonom\u00eda de la comunidad f\u00fangica del suelo, evaluadas en tres momentos (T0, T1 y T2).", "keywords": ["soil chemistry", "soil health", "soil microorganisms", "Soil microbial biomass", "Soil microbial activity", "Arbuscular mycorrhizal fungi", "Soil microbial catabolic profile", "arbuscular mycorrhizal fungi", "soil microbial biomass", "soil fungal communicity structure and taxonomy", "soil microbial catabolic profile", "Soil health", "soil fungi", "mycorrhizae", "soil microbial activity", "Soil fungal communicity structure and taxonomy"], "contacts": [{"organization": "Mart\u00ednez-Garc\u00eda, Laura B., Creamer, Rachel, Allaphilippe, Aude,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10261/407328"}, {"rel": "self", "type": "application/geo+json", "title": "10261/407328", "name": "item", "description": "10261/407328", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10261/407328"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-01T00:00:00Z"}}, {"id": "11585/996222", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-25T16:24:53Z", "type": "Journal Article", "created": "2021-07-10", "title": "A critical perspective on interpreting amplicon sequencing data in soil ecological research", "description": "Abstract   Microbial community analysis via marker gene amplicon sequencing has become a routine method in the field of soil research. In this perspective, we discuss technical challenges and limitations of amplicon sequencing and present statistical and experimental approaches that can help addressing the spatio-temporal complexity of soil and the high diversity of organisms therein. We illustrate the impact of compositionality on the interpretation of relative abundance data and discuss effects of sample replication on the statistical power in soil community analysis. Additionally, we argue for the need of increased study reproducibility and data availability, as well as complementary techniques for generating deeper ecological insights into microbial roles and our understanding thereof in soil ecosystems. At this stage, we call upon researchers and specialized soil journals to consider the current state of data analysis, interpretation, and availability to improve the rigor of future studies.", "keywords": ["0301 basic medicine", "2. Zero hunger", "Soil microbial diversity", "0303 health sciences", "Soil metabarcoding", "DIVERSITY", "Ecology; Soil microbes; Amplicon sequencing", "Compositional data", "SCALE SPATIAL HETEROGENEITY", "15. Life on land", "BIOMASS", "03 medical and health sciences", "106026 \u00d6kosystemforschung", "Soil complexity", "CARBON-USE EFFICIENCY", "BACTERIA", "DNA EXTRACTION", "MICROORGANISMS", "MICROBIAL COMMUNITIES", "106026 Ecosystem research", "RIBOSOMAL-RNA", "Amplicon sequencing", "Soil microorganisms", "GENERATION"]}, "links": [{"href": "https://doi.org/11585/996222"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11585/996222", "name": "item", "description": "11585/996222", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11585/996222"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-01T00:00:00Z"}}, {"id": "233d625c-0e9e-43f3-9c81-325993b5343a", "type": "Feature", "geometry": {"type": "Polygon", "coordinates": [[[11.69, 48.4], [11.69, 48.4], [11.69, 48.4], [11.69, 48.4], [11.69, 48.4]]]}, "properties": {"rights": "Restrictions applied to assure the protection of privacy or intellectual property, and any special restrictions or limitations or warnings on using the resource or metadata.(e.g. Reports, articles, papers, scientific and non - scientific works of any form, including tables, maps, or any other kind of output, in printed or electronic form, based in whole or in part on the data supplied, must contain an acknowledgement of the form: \"Data re-used from the BonaRes Data Centre www.bonares.de. This data were created as part of BonaRes Module A-Project - InnoSoilPhos's research activities.\"Although every care has been taken in preparing and testing the data, BonaRes Module A-Project - InnoSoilPhos and BonaRes Data Centre cannot guarantee that the data are correct; neither does BonaRes Module A-Project - InnoSoilPhos and BonaRes Data Centre accept any liability whatsoever for any error, missing data or omission in the data, or for any loss or damage arising from its use. The BonaRes Module A-Project - InnoSoilPhos and BonaRes Data Centre will not be responsible for any direct or indirect use which might be made of the data. The access to this data is restricted during embargo time. If prior access is requested, contact the data owner / author.", "updated": "2021-03-03", "type": "Service", "created": "2017-05-05", "language": "eng", "title": "WMS Service of the dataset 'Raw data of C and N measurements of agricultural soils in Rostock and Freising in 2015 and links to the relevant metagenomic sequencing data in the NCBI Sequence Read Archive'", "description": "This WMS Service includes spatial information used by datasets 'WMS Service of the dataset 'Raw data of C and N measurements of agricultural soils in Rostock and Freising in 2015 and links to the relevant metagenomic sequencing data in the NCBI Sequence Read Archive''", "keywords": ["infoMapAccessService", "Soil", "Soil microorganisms", "Phosphate fertilizers", "DNA sequence", "Organic fertilizers", "DNA sequence", "opendata"], "contacts": [{"name": "Stefanie Schulz", "organization": "Helmholtz Zentrum M\u00fcnchen", "position": "Posdoc", "roles": ["supervisor"], "phones": [{"value": "+498931873054"}], "emails": [{"value": "stefanie.schulz@helmholtz-muenchen.de"}], "addresses": [{"deliveryPoint": [null], "city": "Neuherberg", "administrativeArea": null, "postalCode": null, "country": "Germany"}], "links": [{"href": null}]}, {"name": "BonaRes Data Centre", "organization": "Leibniz Centre for Agricultural Landscape Research (ZALF)", "position": "Research Platform 'Data' - WG Geodata", "roles": ["publisher"], "phones": [{"value": "+49 33432 82 171"}], "emails": [{"value": "bonares-datenzentrum@zalf.de"}], "addresses": [{"deliveryPoint": ["Eberswalder Strasse 84"], "city": "M\u00fcncheberg", "administrativeArea": "Brandenburg", "postalCode": "15374", "country": "Germany"}], "links": [{"href": null}]}, {"name": "Peter Leinweber", "organization": "University of Rostock", "position": "Head of Soil Science", "roles": ["projectLeader"], "phones": [{"value": "+493814983120"}], "emails": [{"value": "peter.leinweber@uni-rostock.de"}], "addresses": [{"deliveryPoint": [null], "city": "Rostock", "administrativeArea": null, "postalCode": null, "country": "Germany"}], "links": [{"href": null}]}, {"name": "Martin Grafe", "organization": "Helmholtz Zentrum M\u00fcnchen", "position": null, "roles": ["author"], "phones": [{"value": null}], "emails": [{"value": "martin_grafe@outlook.com"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": null}]}, {"name": "Michael Schloter", "organization": "Helmholtz Zentrum M\u00fcnchen", "position": "Professor", "roles": ["workPackageLeader"], "phones": [{"value": null}], "emails": [{"value": "schloter@helmholtz-muenchen.de"}], "addresses": [{"deliveryPoint": [null], "city": "Neuherberg", "administrativeArea": null, "postalCode": null, "country": "Germany"}], "links": [{"href": null}]}, {"organization": "Helmholtz Zentrum M\u00fcnchen", "roles": ["contributor"]}], "themes": [{"concepts": [{"id": "infoMapAccessService"}], "scheme": "GEMET - INSPIRE themes, version 1.0"}, {"concepts": [{"id": "Soil"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "Soil microorganisms"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "Phosphate fertilizers"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "DNA sequence"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "Organic fertilizers"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "DNA sequence"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "opendata"}], "scheme": "Individual"}]}, "links": [{"href": "https://maps.bonares.de/mapapps/resources/apps/bonares/index.html?lang=en&mid=233d625c-0e9e-43f3-9c81-325993b5343a", "rel": "information"}, {"href": "https://maps.bonares.de/wss/service/ags-relay/ags/guest/arcgis/rest/services/Innosoilphos/INNOSOILPHOS_ID_4014_FS_HRO_CN_2015_XY_PROD/MapServer/WMSServer?request=GetCapabilities&service=WMS"}, {"href": "https://maps.bonares.de/wss/service/ags-relay/ags/guest/arcgis/rest/services/Innosoilphos/INNOSOILPHOS_ID_4014_FS_HRO_CN_2015_XY_PROD/MapServer/WMSServer?request=GetCapabilities&service=WMS"}, {"href": "https://maps.bonares.de/wss/service/ags-relay/ags/guest/arcgis/rest/services/Innosoilphos/INNOSOILPHOS_ID_4014_FS_HRO_CN_2015_XY_PROD/MapServer/WMSServer?request=GetCapabilities&service=WMS"}, {"href": "https://maps.bonares.de/wss/service/ags-relay/ags/guest/arcgis/rest/services/Innosoilphos/INNOSOILPHOS_ID_4014_FS_HRO_CN_2015_XY_PROD/MapServer/WMSServer?request=GetCapabilities&service=WMS"}, {"rel": "self", "type": "application/geo+json", "title": "233d625c-0e9e-43f3-9c81-325993b5343a", "name": "item", "description": "233d625c-0e9e-43f3-9c81-325993b5343a", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/233d625c-0e9e-43f3-9c81-325993b5343a"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"interval": ["2015-04-15T00:00:00Z", "2015-09-15T00:00:00Z"]}}, {"id": "257095bc-bbff-4a93-9b78-cd3ae842aa29", "type": "Feature", "geometry": {"type": "Polygon", "coordinates": [[[8.76, 53.73], [8.76, 54.06], [12.08, 54.06], [12.08, 53.73], [8.76, 53.73]]]}, "properties": {"rights": "Restrictions applied to assure the protection of privacy or intellectual property, and any special restrictions or limitations or warnings on using the resource or metadata. Reports, articles, papers, scientific and non - scientific works of any form, including tables, maps, or any other kind of output, in printed or electronic form, based in whole or in part on the data supplied, must contain an acknowledgement of the form: \"Data reused from the BonaRes Data Centre www.bonares.de. This data were created as part of the ZALF Datenerfassung's research activities.\" Although every care has been taken in preparing and testing the data, the ZALF Datenerfassung and the BonaRes Data Centre cannot guarantee that the data are correct; neither does the ZALF Datenerfassung and the BonaRes Data Centre accept any liability whatsoever for any error, missing data or omission in the data, or for any loss or damage arising from its use. The ZALF Datenerfassung and BonaRes Data Centre will not be responsible for any direct or indirect use which might be made of the data.", "updated": "2024-03-20", "type": "Service", "created": "2024-03-04", "language": "eng", "title": "Web Map Service of the dataset 'Abundance of different microorganism groups in soil and roots in a field trial on starter fertilization and application of plant growth-promoting microorganisms'", "description": "This Web Map Service includes spatial information used by the dataset 'Abundance of different microorganism groups in soil and roots in a field trial on starter fertilization and application of plant growth-promoting microorganisms'", "keywords": ["infoMapAccessService", "Soil", "maize", "field experimentation", "soil microorganisms", "Fungi", "Bacteria", "arbuscular mycorrhiza", "quantitative polymerase chain reaction", "fertilization", "Soil", "maize", "field experimentation", "soil microorganisms", "Fungi", "Bacteria", "arbuscular mycorrhiza", "quantitative polymerase chain reaction", "fertilization", "Europe", "Germany", "Lower Saxony", "Wanna", "Mecklenburg-Vorpommern", "Rostock"], "contacts": [{"name": "Leibniz Centre for Agricultural Landscape Research", "organization": "ZALF", "position": "Research Platform 'Data Analysis & Simulation' - Workgroup Research Data Management", "roles": ["publisher"], "phones": [{"value": "+49 33432 82 300"}], "emails": [{"value": "dataservice@zalf.de"}], "addresses": [{"deliveryPoint": ["Eberswalder Strasse 84"], "city": "M\u00fcncheberg", "administrativeArea": "Brandenburg", "postalCode": "15374", "country": "Germany"}], "links": [{"href": {"url": null, "protocol": null, "protocol_url": "", "name": "https://ror.org/01ygyzs83", "name_url": "", "description": "ROR", "description_url": "", "applicationprofile": null, "applicationprofile_url": "", "function": null}}]}, {"name": "Lena Geist", "organization": "Leibniz Centre for Agricultural Landscape Research", "position": null, "roles": ["author"], "phones": [{"value": null}], "emails": [{"value": "Lena.Geist@zalf.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": null}]}, {"name": "Renate Wolfer", "organization": "Leibniz Centre for Agricultural Landscape Research", "position": null, "roles": ["author"], "phones": [{"value": null}], "emails": [{"value": "Renate.Wolfer@zalf.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": {"url": null, "protocol": null, "protocol_url": "", "name": "0009-0002-6736-2586", "name_url": "", "description": "ORCID", "description_url": "", "applicationprofile": null, "applicationprofile_url": "", "function": null}}]}, {"name": "Frank Eulenstein", "organization": "Leibniz Centre for Agricultural Landscape Research", "position": null, "roles": ["projectLeader"], "phones": [{"value": null}], "emails": [{"value": "feulenstein@zalf.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": {"url": null, "protocol": null, "protocol_url": "", "name": "0000-0001-6833-5315", "name_url": "", "description": "ORCID", "description_url": "", "applicationprofile": null, "applicationprofile_url": "", "function": null}}]}, {"name": "Marina M\u00fcller", "organization": "Leibniz Centre for Agricultural Landscape Research", "position": null, "roles": ["supervisor"], "phones": [{"value": null}], "emails": [{"value": "mmueller@zalf.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": null}]}, {"name": "Petra Lange", "organization": "Leibniz Centre for Agricultural Landscape Research", "position": null, "roles": ["dataCollector"], "phones": [{"value": null}], "emails": [{"value": "Petra.Lange@zalf.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": null}]}, {"organization": "Leibniz Centre for Agricultural Landscape Research", "roles": ["contributor"]}], "themes": [{"concepts": [{"id": "infoMapAccessService"}], "scheme": "GEMET - 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Concepts, version 2.4"}, {"concepts": [{"id": "Boden"}], "scheme": "GEMET - INSPIRE themes, version 1.0"}], "rights": "Restrictions applied to assure the protection of privacy or intellectual property, and any special restrictions or limitations or warnings on using the resource or metadata. Reports, articles, papers, scientific and non - scientific works of any form, including tables, maps, or any other kind of output, in printed or electronic form, based in whole or in part on the data supplied, must contain an acknowledgement of the form: \"Data reused from the BonaRes Data Centre www.bonares.de. This data were created as part of the BonaRes Module A-Project - CATCHY's research activities.\" Although every care has been taken in preparing and testing the data, the BonaRes Module A-Project - CATCHY and the BonaRes Data Centre cannot guarantee that the data are correct; neither does the BonaRes Module A-Project - CATCHY and the BonaRes Data Centre accept any liability whatsoever for any error, missing data or omission in the data, or for any loss or damage arising from its use. The BonaRes Module A-Project - CATCHY and BonaRes Data Centre will not be responsible for any direct or indirect use which might be made of the data.", "updated": "2021-04-13", "type": "Dataset", "created": "2020-07-03", "language": "eng", "title": "13C labeling experiment catch crops", "description": "We investigate the impacts of increasing plant diversity in catch crop rotations on rhizosphere C input and microbial utilization. Mustard (Sinapis alba L.) planted as a single cultivar was compared to diversified catch crop mixtures of four (Mix4) or 12 species (Mix12). We traced the C transfer from shoots to roots towards the soil microbial community and the soil respiration in a 13C pulse labelling field experiment. The data set included measurements of organic carbon, total nitrogen as well as their stable isotopes in plant and soil material.  The growth and activity of the soil microbiome was investigated by phospholipid fatty acid (PLFA) analyses. The transferred of C from plants towards the microbiome was measured by 13C label concentration in specific PLFA markers.\n\nMore information is available: Gentsch, N., Boy, J., Batalla, J.D.K. et al. Catch crop diversity increases rhizosphere carbon input and soil microbial biomass. Biol Fertil Soils 56, 943\u2013957 (2020). https://doi.org/10.1007/s00374-020-01475-8\n\nResearch domain: Soil Sciences\n\nResearch question: The aim of the study was to test how catch crop diversity affects C cycling from the atmosphere through the plant-soil-microbiome system. More specifically, the efficiency for C uptake and the belowground input of recently photosynthesized C products and their partitioning in the rhizosphere was investigated. We hypothesized that diversified catch cropping systems would (I) increase photosynthetic C fixation with higher transport rates of newly assimilated C to the roots, (II) stimulate microbial growth through higher C utilization when C reaches the rhizosphere and (III) prolongate the C cycling throughout the plant-soil-microbiome system.", "formats": [{"name": "CSV"}], "keywords": ["Soil", "carbon cycle", "biogeochemical cycle", "soil microorganisms", "soil organisms", "agrobiodiversity", "catch crops", "cover plants", "opendata", "13C isotope labeling", "Boden", "Kohlenstoffkreislauf", "Biogeochemischer Kreislauf", "Bioakkumulation", "Fruchtfolge", "Boden"], "contacts": [{"name": "Norman Gentsch", "organization": "Leibniz Universit\u00e4t Hannover", "position": "Researcher", "roles": ["author"], "phones": [{"value": null}], "emails": [{"value": "gentsch@ifbk.uni-hannover.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": null}]}, {"name": "Barbara Reinhold-Hureck", "organization": "Universit\u00e4t Bremen", "position": "Prof.", "roles": ["projectLeader"], "phones": [{"value": null}], "emails": [{"value": "reinhol@uni-bremen.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": null}]}, {"name": "BonaRes Data Centre", "organization": "Leibniz Centre for Agricultural Landscape Research (ZALF)", "position": "Research Platform 'Data Analysis & Simulation' - WG Geodata", "roles": ["publisher"], "phones": [{"value": "+49 33432 82 171"}], "emails": [{"value": "bonares-datenzentrum@zalf.de"}], "addresses": [{"deliveryPoint": ["Eberswalder Strasse 84"], "city": "M\u00fcncheberg", "administrativeArea": "Brandenburg", "postalCode": "15374", "country": "Germany"}], "links": [{"href": null}]}, {"organization": "Leibniz Universit\u00e4t Hannover", "roles": ["contributor"]}]}, "links": [{"href": "https://maps.bonares.de/mapapps/resources/apps/bonares/index.html?lang=en&mid=3139a989-68de-4b85-a786-5c2fd2f0b069", "rel": "download"}, {"rel": "self", "type": "application/geo+json", "title": "3139a989-68de-4b85-a786-5c2fd2f0b069", "name": "item", "description": "3139a989-68de-4b85-a786-5c2fd2f0b069", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/3139a989-68de-4b85-a786-5c2fd2f0b069"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"interval": ["2016-10-18T00:00:00Z", "2016-11-14T00:00:00Z"]}}, {"id": "9ae6b3f1-57dc-41f6-a351-d12b9e390f78", "type": "Feature", "geometry": {"type": "Polygon", "coordinates": [[[14.63, 51.78], [14.63, 51.79], [14.64, 51.79], [14.64, 51.78], [14.63, 51.78]]]}, "properties": {"rights": "Restrictions applied to assure the protection of privacy or intellectual property, and any special restrictions or limitations or warnings on using the resource or metadata. Reports, articles, papers, scientific and non - scientific works of any form, including tables, maps, or any other kind of output, in printed or electronic form, based in whole or in part on the data supplied, must contain an acknowledgement of the form: \"Data reused from the BonaRes Data Centre www.bonares.de. This data were created as part of the BonaRes Module A-Project - BonaRes - SIGNAL's research activities.\" Although every care has been taken in preparing and testing the data, the BonaRes Module A-Project - BonaRes - SIGNAL and the BonaRes Data Centre cannot guarantee that the data are correct; neither does the BonaRes Module A-Project - BonaRes - SIGNAL and the BonaRes Data Centre accept any liability whatsoever for any error, missing data or omission in the data, or for any loss or damage arising from its use. The BonaRes Module A-Project - BonaRes - SIGNAL and BonaRes Data Centre will not be responsible for any direct or indirect use which might be made of the data.", "updated": "2023-01-26", "type": "Service", "created": "2023-01-04", "language": "eng", "title": "Web Map Service of the dataset 'Tree-Distance and Tree-Species Effects on Soil Biota in a Temperate Agroforestry System'", "description": "This Web Map Service includes spatial information used by datasets 'AGIS Map Service of the dataset 'Tree-Distance and Tree-Species Effects on Soil Biota in a Temperate Agroforestry System''", "formats": [{"name": "CSV"}], "keywords": ["infoMapAccessService", "Soil", "temperate agroforestry; alley cropping; earthworms; soil microorganisms; soil suppressiveness"], "contacts": [{"name": "Lukas Beule", "organization": "Julius K\u00fchn Institute (JKI)\u2013Federal Research Centre for Cultivated Plants, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Berlin, Germany", "position": null, "roles": ["author"], "phones": [{"value": null}], "emails": [{"value": "lukas.beule@julius-kuehn.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": {"url": "https://orcid.org/", "protocol": null, "protocol_url": "", "name": "0000-0003-1107-7540", "name_url": "", "description": "ORCID", "description_url": "", "applicationprofile": null, "applicationprofile_url": "", "function": null}}]}, {"name": "Lukas Beule", "organization": "Julius K\u00fchn Institute (JKI)\u2013Federal Research Centre for Cultivated Plants, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Berlin, Germany", "position": null, "roles": ["projectLeader"], "phones": [{"value": null}], "emails": [{"value": "lukas.beule@julius-kuehn.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": {"url": "https://orcid.org/", "protocol": null, "protocol_url": "", "name": "0000-0003-1107-7540", "name_url": "", "description": "ORCID", "description_url": "", "applicationprofile": null, "applicationprofile_url": "", "function": null}}]}, {"name": null, "organization": "Leibniz Centre for Agricultural Landscape Research (ZALF)", "position": "Research Platform 'Data Analysis & Simulation' - Workgroup Research Data Management", "roles": ["publisher"], "phones": [{"value": "+49 33432 82 300"}], "emails": [{"value": "dataservice@zalf.de"}], "addresses": [{"deliveryPoint": ["Eberswalder Strasse 84"], "city": "M\u00fcncheberg", "administrativeArea": "Brandenburg", "postalCode": "15374", "country": "Germany"}], "links": [{"href": null}]}, {"name": "Lukas Beule", "organization": "Julius K\u00fchn Institute (JKI)\u2013Federal Research Centre for Cultivated Plants, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Berlin, Germany", "position": null, "roles": ["other"], "phones": [{"value": null}], "emails": [{"value": "lukas.beule@julius-kuehn.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": {"url": "https://orcid.org/", "protocol": null, "protocol_url": "", "name": "0000-0003-1107-7540", "name_url": "", "description": "ORCID", "description_url": "", "applicationprofile": null, "applicationprofile_url": "", "function": null}}]}, {"organization": "Julius K\u00fchn Institute (JKI)\u2013Federal Research Centre for Cultivated Plants, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Berlin, Germany", "roles": ["contributor"]}], "themes": [{"concepts": [{"id": "infoMapAccessService"}], "scheme": "GEMET - INSPIRE themes, version 1.0"}, {"concepts": [{"id": "Soil"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}]}, "links": [{"href": "https://maps.bonares.de/mapapps/resources/apps/bonares/index.html?lang=en&mid=9ae6b3f1-57dc-41f6-a351-d12b9e390f78", "rel": "download"}, {"href": "https://maps.bonares.de/wss/service/ags-relay/ags/guest/arcgis/rest/services/Deutschland/MapServer/WMSServer"}, {"rel": "self", "type": "application/geo+json", "title": "9ae6b3f1-57dc-41f6-a351-d12b9e390f78", "name": "item", "description": "9ae6b3f1-57dc-41f6-a351-d12b9e390f78", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/9ae6b3f1-57dc-41f6-a351-d12b9e390f78"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-26T00:00:00Z"}}, {"id": "a121feba-bcf7-4f35-ab18-e963ebc0b7c2", "type": "Feature", "geometry": {"type": "Polygon", "coordinates": [[[11.69, 48.4], [11.69, 48.4], [11.69, 48.4], [11.69, 48.4], [11.69, 48.4]]]}, "properties": {"themes": [{"concepts": [{"id": "farming"}], "scheme": "https://standards.iso.org/iso/19139/resources/gmxCodelists.xml#MD_TopicCategoryCode"}, {"concepts": [{"id": "Soil"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "Soil microorganisms"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "Phosphate fertilizers"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "DNA sequence"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "Organic fertilizers"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "DNA sequence"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "Boden"}], "scheme": "GEMET - INSPIRE themes, version 1.0"}, {"concepts": [{"id": "opendata"}], "scheme": "Individual"}], "rights": "Restrictions applied to assure the protection of privacy or intellectual property, and any special restrictions or limitations or warnings on using the resource or metadata.(e.g. Reports, articles, papers, scientific and non - scientific works of any form, including tables, maps, or any other kind of output, in printed or electronic form, based in whole or in part on the data supplied, must contain an acknowledgement of the form: \"Data re-used from the BonaRes Data Centre www.bonares.de. This data were created as part of BonaRes Module A-Project - InnoSoilPhos's research activities.\"Although every care has been taken in preparing and testing the data, BonaRes Module A-Project - InnoSoilPhos and BonaRes Data Centre cannot guarantee that the data are correct; neither does BonaRes Module A-Project - InnoSoilPhos and BonaRes Data Centre accept any liability whatsoever for any error, missing data or omission in the data, or for any loss or damage arising from its use. The BonaRes Module A-Project - InnoSoilPhos and BonaRes Data Centre will not be responsible for any direct or indirect use which might be made of the data. The access to this data is restricted during embargo time. If prior access is requested, contact the data owner / author.", "updated": "2020-09-01", "type": "Dataset", "created": "2017-05-05", "language": "eng", "title": "Raw data of C and N measurements of agricultural soils in Rostock and Freising in 2015 and links to the relevant metagenomic sequencing data in the NCBI Sequence Read Archive", "description": "The availability of phosphorus (P), strongly influences crop yield and quality. However, due to agricultural practices P accumulated in soil, mostly in inaccessible forms. Bacteria play an important role to mobilize P. The release of P is rather a result of the bacterial need for C and N than the immediate need of P. Thus, we postulated that the addition of carbon and N would stimulate phosphorus mobilization by bacteria. Thus, we performed a metagenomic study to investigate soils from two agricultural sites (Rostock, Freising), which only received mineral N fertilizer or mineral N and organic fertilizer for more than 20 years. The metagenomic sequencing followed by taxonomic and functional annotations of the sequences by blasting against the NCBI-nr database (http://ftp.ncbi.nlm.nih.gov/blast/ db/FASTA/nr.gz) and the Kyoto Encyclopedia of Genes and Genomes (KEGG) database (June 2011) also revealed that independent of site and season, the relative abundance of genes involved in P turnover was not significantly affected by the addition of fertilizers. However, the type of fertilization had a significant impact on the composition of bacterial families harboring genes coding for the different P transformation processes. This gives rise to the possibility that fertilizers can substantially change phosphorus turnover efficiency by favoring different families. Additionally, none of the families involved in phosphorus turnover covered all investigated processes. Therefore, promoting bacteria which play an essential role specifically in mobilization of hardly accessible phosphorus could help to secure the phosphorus supply of plants in soils with low P input as so far the most abundant genes involved in the acquisition of external P sources in our study were those involved in solubilization and subsequent uptake of inorganic phosphorus. The raw sequencing data is available at the sequencing read archive (SRA) under the BioProject ID PRJNA385596 (SAMN06894543- SAMN06894566). Additionally, we determined dissolved organic nitrogen (DON) and carbon (DOC) contents by extracting the soil with 0.01 M CaCl2 solution (soil to liquid ratio: 1:4) and the microbial biomass carbon (Cmic) and nitrogen (Nmic) content by applying a chloroform-fumigation-extraction procedure. Our data indicate that more the site then the treatment changed those values as stability of Cmic, Nmic as well as DOC and DON was high across the different fertilizer regimes. Only additional P fertilization slightly increased DOC values. Data are published in Grafe, M., Goers, M., von Tucher, S., Baum, C., Zimmer, D., Leinweber, P., Vestergaard, G., Kublik, S., Schloter, M., and Schulz, S.: Bacterial potentials for uptake, solubilization and mineralization of extracellular phosphorus in agricultural soils are highly stable under different fertilization regimes, Environ. Microbiol. 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Reports, articles, papers, scientific and non - scientific works of any form, including tables, maps, or any other kind of output, in printed or electronic form, based in whole or in part on the data supplied, must contain an acknowledgement of the form: \"Data reused from the BonaRes Data Centre www.bonares.de. This data were created as part of the ZALF Datenerfassung's research activities.\" Although every care has been taken in preparing and testing the data, the ZALF Datenerfassung and the BonaRes Data Centre cannot guarantee that the data are correct; neither does the ZALF Datenerfassung and the BonaRes Data Centre accept any liability whatsoever for any error, missing data or omission in the data, or for any loss or damage arising from its use. 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INSPIRE themes, version 1.0"}], "rights": "Restrictions applied to assure the protection of privacy or intellectual property, and any special restrictions or limitations or warnings on using the resource or metadata. Reports, articles, papers, scientific and non - scientific works of any form, including tables, maps, or any other kind of output, in printed or electronic form, based in whole or in part on the data supplied, must contain an acknowledgement of the form: \"Data reused from the BonaRes Data Centre www.bonares.de. This data were created as part of the BonaRes Module A-Project - SIGNAL's research activities.\" Although every care has been taken in preparing and testing the data, the BonaRes Module A-Project - SIGNAL and the BonaRes Data Centre cannot guarantee that the data are correct; neither does the BonaRes Module A-Project - SIGNAL and the BonaRes Data Centre accept any liability whatsoever for any error, missing data or omission in the data, or for any loss or damage arising from its use. The BonaRes Module A-Project - SIGNAL and BonaRes Data Centre will not be responsible for any direct or indirect use which might be made of the data. The access to this data is restricted during embargo time. If prior access is requested, contact the data owner / author.", "updated": "2024-02-26", "type": "Dataset", "created": "2020-12-01", "language": "eng", "title": "Potential hydrolytic enzyme activitiy (\u03b2-glucosidase) of topsoils in alley cropping systems at different distances of trees", "description": "Potential hydrolytic enzyme activities were analysed according to Marx et al. (2001) with the fluorescently labelled substrate based on 4-MUF-\u03b2-D glucopyranoside. The enzyme contributes to the degradation of cellulose.\nMarx MC,Wood M, Jarvis SC (2001) Amicroplate fluorimetric assay for the study of enzyme diversity in soils. Soil Biol Biochem 33:1633\u20131640\nSoil samples were sampled in 0-5 cm in October/November 2015\n\nResearch domain: Soil Sciences\n\nResearch question: Spatial distribution of soil quality indicators in topsoils at three German silvo-arable ACS and effect of distance of trees and soil abiotic parameters on microbial soil properties.", "formats": [{"name": "CSV"}], "keywords": ["Soil", "cellulose", "enzyme activity", "soil microorganisms", "opendata", "Boden"], "contacts": [{"name": "Christine Wachendorf", "organization": "University Kassel", "position": null, "roles": ["author"], "phones": [{"value": "+49 5542981504"}], "emails": [{"value": "c.wachendorf@uni-kassel.de"}], "addresses": [{"deliveryPoint": ["Nordbahnhofstr. 1A"], "city": "Witzenhausen", "administrativeArea": "Hesse", "postalCode": "37218", "country": "Germany"}], "links": [{"href": null}]}, {"name": "BonaRes Data Centre", "organization": "Leibniz Centre for Agricultural Landscape Research (ZALF)", "position": "Research Platform 'Data Analysis & Simulation' - WG Geodata", "roles": ["publisher"], "phones": [{"value": "+49 33432 82 171"}], "emails": [{"value": "bonares-datenzentrum@zalf.de"}], "addresses": [{"deliveryPoint": ["Eberswalder Strasse 84"], "city": "M\u00fcncheberg", "administrativeArea": "Brandenburg", "postalCode": "15374", "country": "Germany"}], "links": [{"href": null}]}, {"name": "Edzo Veldkamp", "organization": "University G\u00f6ttingen", "position": "Soil Science of Tropical and Subtropical Ecosystems", "roles": ["projectLeader"], "phones": [{"value": "+49 55139 7339"}], "emails": [{"value": "eveldka@gwdg.de"}], "addresses": [{"deliveryPoint": ["B\u00fcsgenweg 2"], "city": "G\u00f6ttingen", "administrativeArea": "Lower Saxony", "postalCode": "37077", "country": "Germany"}], "links": [{"href": null}]}, {"organization": "University Kassel", "roles": ["contributor"]}]}, "links": [{"href": "https://maps.bonares.de/mapapps/resources/apps/bonares/index.html?lang=en&mid=2fa214f3-8d6d-4f8c-bd99-d73b67f0d270", "rel": "download"}, {"rel": "self", "type": "application/geo+json", "title": "2fa214f3-8d6d-4f8c-bd99-d73b67f0d270", "name": "item", "description": "2fa214f3-8d6d-4f8c-bd99-d73b67f0d270", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/2fa214f3-8d6d-4f8c-bd99-d73b67f0d270"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-02-26T00:00:00Z"}}, {"id": "f1c0591c-6578-484c-9af5-3bcdfa3bf1f6", "type": "Feature", "geometry": {"type": "Polygon", "coordinates": [[[14.63, 51.78], [14.63, 51.79], [14.64, 51.79], [14.64, 51.78], [14.63, 51.78]]]}, "properties": {"themes": [{"concepts": [{"id": "farming"}], "scheme": "https://standards.iso.org/iso/19139/resources/gmxCodelists.xml#MD_TopicCategoryCode"}, {"concepts": [{"id": "Soil"}, {"id": "soil microorganisms"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "opendata"}, {"id": "temperate agroforestry; alley cropping; earthworms; soil microorganisms; soil suppressiveness"}], "scheme": "Individual"}, {"concepts": [{"id": "Boden"}], "scheme": "GEMET - INSPIRE themes, version 1.0"}], "rights": "Restrictions applied to assure the protection of privacy or intellectual property, and any special restrictions or limitations or warnings on using the resource or metadata. Reports, articles, papers, scientific and non - scientific works of any form, including tables, maps, or any other kind of output, in printed or electronic form, based in whole or in part on the data supplied, must contain an acknowledgement of the form: \"Data reused from the BonaRes Data Centre www.bonares.de. This data were created as part of the BonaRes Module A-Project - BonaRes - SIGNAL's research activities.\" Although every care has been taken in preparing and testing the data, the BonaRes Module A-Project - BonaRes - SIGNAL and the BonaRes Data Centre cannot guarantee that the data are correct; neither does the BonaRes Module A-Project - BonaRes - SIGNAL and the BonaRes Data Centre accept any liability whatsoever for any error, missing data or omission in the data, or for any loss or damage arising from its use. The BonaRes Module A-Project - BonaRes - SIGNAL and BonaRes Data Centre will not be responsible for any direct or indirect use which might be made of the data.", "updated": "2023-01-26", "type": "Dataset", "created": "2023-01-04", "language": "eng", "title": "Tree-Distance and Tree-Species Effects on Soil Biota in a Temperate Agroforestry System", "description": "Cropland agroforestry systems are sustainable land-use systems with numerous environmental advantages over monoculture croplands including promotion of soil life. This study aimed to investigate tree-species and tree-distance effects on soil biota in a temperate agroforestry system. Our study was conducted at a paired alley-cropping and monoculture cropland system. The tree rows of the agroforestry system comprised of blocks of poplar Jacometti 78B, poplar Max 1 or black locust. Within the agroforestry system, soil microbial and earthworm communities were collected along transects spanning from the center of the tree rows into the crop rows. Archaea, bacteria, and fungi were quantified using real-time PCR. The community composition of fungi and earthworms was deciphered using amplicon sequencing and morphological identification, respectively.\n\nResearch domain: Soil Sciences\n\nResearch question: This study aimed to investigate the impact of three different tree species (two poplar species and black locust) on soil biota (archaea, bacteria, fungi, and earthworms) in a temperate alley-cropping agroforestry system. Furthermore, tree-distance effects on soil biota were tested by sampling multiple locations along transects spanning from the tree row into the crop row of the agroforestry system. We hypothesized that tree rows promote the abundance and alter the community composition of soil biota. We further hypothesized that these changes are dependent on the distance to the trees (tree-distance effect) as well as the tree species (tree-species effect).", "formats": [{"name": "CSV"}], "keywords": ["Soil", "soil microorganisms", "opendata", "temperate agroforestry; alley cropping; earthworms; soil microorganisms; soil suppressiveness", "Boden"], "contacts": [{"name": "Lukas Beule", "organization": "Julius K\u00fchn Institute (JKI)\u2013Federal Research Centre for Cultivated Plants, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Berlin, Germany", "position": null, "roles": ["author"], "phones": [{"value": null}], "emails": [{"value": "lukas.beule@julius-kuehn.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": {"url": "https://orcid.org/", "protocol": null, "protocol_url": "", "name": "0000-0003-1107-7540", "name_url": "", "description": "ORCID", "description_url": "", "applicationprofile": null, "applicationprofile_url": "", "function": null}}]}, {"name": "Lukas Beule", "organization": "Julius K\u00fchn Institute (JKI)\u2013Federal Research Centre for Cultivated Plants, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Berlin, Germany", "position": null, "roles": ["projectLeader"], "phones": [{"value": null}], "emails": [{"value": "lukas.beule@julius-kuehn.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": {"url": "https://orcid.org/", "protocol": null, "protocol_url": "", "name": "0000-0003-1107-7540", "name_url": "", "description": "ORCID", "description_url": "", "applicationprofile": null, "applicationprofile_url": "", "function": null}}]}, {"name": null, "organization": "Leibniz Centre for Agricultural Landscape Research (ZALF)", "position": "Research Platform 'Data Analysis & Simulation' - Workgroup Research Data Management", "roles": ["publisher"], "phones": [{"value": "+49 33432 82 300"}], "emails": [{"value": "dataservice@zalf.de"}], "addresses": [{"deliveryPoint": ["Eberswalder Strasse 84"], "city": "M\u00fcncheberg", "administrativeArea": "Brandenburg", "postalCode": "15374", "country": "Germany"}], "links": [{"href": null}]}, {"name": "Lukas Beule", "organization": "Julius K\u00fchn Institute (JKI)\u2013Federal Research Centre for Cultivated Plants, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Berlin, Germany", "position": null, "roles": ["other"], "phones": [{"value": null}], "emails": [{"value": "lukas.beule@julius-kuehn.de"}], "addresses": [{"deliveryPoint": [null], "city": null, "administrativeArea": null, "postalCode": null, "country": null}], "links": [{"href": {"url": "https://orcid.org/", "protocol": null, "protocol_url": "", "name": "0000-0003-1107-7540", "name_url": "", "description": "ORCID", "description_url": "", "applicationprofile": null, "applicationprofile_url": "", "function": null}}]}, {"organization": "Julius K\u00fchn Institute (JKI)\u2013Federal Research Centre for Cultivated Plants, Institute for Ecological Chemistry, Plant Analysis and Stored Product Protection, Berlin, Germany", "roles": ["contributor"]}]}, "links": [{"href": "https://maps.bonares.de/mapapps/resources/apps/bonares/index.html?lang=en&mid=f1c0591c-6578-484c-9af5-3bcdfa3bf1f6", "rel": "download"}, {"rel": "self", "type": "application/geo+json", "title": "f1c0591c-6578-484c-9af5-3bcdfa3bf1f6", "name": "item", "description": "f1c0591c-6578-484c-9af5-3bcdfa3bf1f6", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/f1c0591c-6578-484c-9af5-3bcdfa3bf1f6"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-26T00:00:00Z"}}, {"id": "97dda154-93d3-4685-beff-9124e7346d68", "type": "Feature", "geometry": {"type": "Polygon", "coordinates": [[[8.76, 53.73], [8.76, 54.06], [12.08, 54.06], [12.08, 53.73], [8.76, 53.73]]]}, "properties": {"themes": [{"concepts": [{"id": "farming"}], "scheme": "https://standards.iso.org/iso/19139/resources/gmxCodelists.xml#MD_TopicCategoryCode"}, {"concepts": [{"id": "Soil"}, {"id": "maize"}, {"id": "field experimentation"}, {"id": "soil microorganisms"}, {"id": "Fungi"}, {"id": "Bacteria"}, {"id": "arbuscular mycorrhiza"}, {"id": "quantitative polymerase chain reaction"}, {"id": "fertilization"}], "scheme": "AGROVOC Multilingual agricultural thesaurus"}, {"concepts": [{"id": "opendata"}], "scheme": "Individual"}, {"concepts": [{"id": "Boden"}], "scheme": "GEMET - INSPIRE themes, version 1.0"}, {"concepts": [{"id": "Europe"}, {"id": "Germany"}, {"id": "Lower Saxony"}, {"id": "Wanna"}, {"id": "Mecklenburg-Vorpommern"}, {"id": "Rostock"}], "scheme": "individual"}], "rights": "Restrictions applied to assure the protection of privacy or intellectual property, and any special restrictions or limitations or warnings on using the resource or metadata. Reports, articles, papers, scientific and non - scientific works of any form, including tables, maps, or any other kind of output, in printed or electronic form, based in whole or in part on the data supplied, must contain an acknowledgement of the form: \"Data reused from the BonaRes Data Centre www.bonares.de. This data were created as part of the ZALF Datenerfassung's research activities.\" Although every care has been taken in preparing and testing the data, the ZALF Datenerfassung and the BonaRes Data Centre cannot guarantee that the data are correct; neither does the ZALF Datenerfassung and the BonaRes Data Centre accept any liability whatsoever for any error, missing data or omission in the data, or for any loss or damage arising from its use. The ZALF Datenerfassung and BonaRes Data Centre will not be responsible for any direct or indirect use which might be made of the data.", "updated": "2024-03-20", "type": "Dataset", "created": "2024-03-04", "language": "eng", "title": "Abundance of different microorganism groups in soil and roots in a field trial on starter fertilization and application of plant growth-promoting microorganisms", "description": "Fertilizer experiments were carried out as plot trials on maize fields over the years 2021, 2022 and 2023. The fields investigated were Wanna Sand (WS), Wanna Sand without biogas slurry (WSo), Rostock Sand (RS) and Wanna Marsch (WM). On the WS and WM fields, 30 m\u00b3 of biogas slurry was applied before the experiment. Starter fertilization was carried out with diammonium phosphate (DAP), microgranular fertilizer (MG) and without (control). In addition, a microorganism preparation (MO) consisting of three mycorrhizal species: R. irregulare, F. mosseae, F. caledonium and Bacillus atrophaeus Abi05 was applied to half of the plots. Soil samples were taken between April and August each year. During the vegetation period, the soil was sampled in and between the maize rows. At some sampling times, additional mixed samples were taken plot by plot. Before the experimental setup samples were taken in blocks or randomly. The abundances of the following microorganism groups were determined using qPCR: Acidobacteria, Actinobacteria, Alpha-Proteobacteria, Beta-Proteobacteria, Cyanobacteria, Firmicutes, Alternaria, Fusarium, Bacillus atrophaeus Abi05 and total fungal population. In addition to the soil samples, root samples were also taken at certain times. The rate of mycorrhization was determined and in some cases DNA was extracted and qPCR measurements were carried out.  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