{"type": "FeatureCollection", "features": [{"id": "10.1002/ldr.2726", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:14:27Z", "type": "Journal Article", "created": "2017-02-23", "title": "Conservation Agriculture Had A Poor Impact On The Soil Porosity Of Veneto Low-Lying Plain Silty Soils After A 5-Year Transition Period", "description": "Abstract<p>Conservation agriculture practices have been proposed as a set of techniques for improving soil structure properties and related ecosystem services. This study compared conservation agriculture (CA) practices (no\uffe2\uff80\uff90tillage, cover crop and residue retention) and conventional intensive tillage system in order to evaluate their effects on total porosity, pore size distribution, pore architecture and morphology. The experiment was set up in 2010 on four farms of the low\uffe2\uff80\uff90lying Veneto Region plain characterized by silty soils. Almost hundred soil samples were collected in 2015 at four depths down to 50\uffe2\uff80\uff90cm layer and investigated for porosity from micrometre (0\uffc2\uffb70074\uffc2\uffa0\uffce\uffbcm) to macrometre (2\uffc2\uffb75\uffc2\uffa0mm) by coupling mercury intrusion porosimetry and X\uffe2\uff80\uff90ray computed microtomography (\uffce\uffbcCT). Indices of soil morphology and architecture were derived by analysing 3D images and mercury intrusion porosimetry pore size curves. Results suggested that silty soils of Veneto plain are microstructured because much (82%) of the porosity ranged between 0\uffc2\uffb70074 and 30\uffc2\uffa0\uffce\uffbcm. CA practices positively influenced the ultramicroporosity class (0\uffc2\uffb71\uffe2\uff80\uff935\uffc2\uffa0\uffce\uffbcm) (1\uffc2\uffb786E\uffe2\uff80\uff9001 vs 1\uffc2\uffb767E\uffe2\uff80\uff9001\uffc2\uffa0\uffce\uffbcm3\uffc2\uffa0\uffce\uffbcm\uffe2\uff88\uff923) that is strictly linked to soil organic carbon stabilization while no effects were observed in X\uffe2\uff80\uff90ray \uffce\uffbcCT porosity domain (&gt; 26\uffc2\uffa0\uffce\uffbcm). Silty soils of Veneto plain showed a slow reaction to CA because of the poor aggregate stability and low soil organic carbon. However, the positive response of the ultramicropore fraction indicates that a virtuous cycle was initiated between soil organic carbon and porosity, hopefully leading to well\uffe2\uff80\uff90developed macropore systems and, in turn, enhanced soil functions and ecosystem services. Copyright \uffc2\uffa9 2017 John Wiley &amp; Sons, Ltd.</p>", "keywords": ["2. Zero hunger", "Conservation agriculture; Mercury intrusion porosimetry; Pore morphology and architecture; Pore size distribution; X-ray computed microtomography; Environmental Chemistry; Development3304 Education; 2300; Soil Science", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land"]}, "links": [{"href": "https://doi.org/10.1002/ldr.2726"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Land%20Degradation%20%26amp%3B%20Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ldr.2726", "name": "item", "description": "10.1002/ldr.2726", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ldr.2726"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-05-12T00:00:00Z"}}, {"id": "10.1016/j.jaap.2018.07.011", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:37Z", "type": "Journal Article", "created": "2018-07-20", "title": "Effects of pyrolysis temperature on the hydrologically relevant porosity of willow biochar", "description": "Open AccessBiochar pore space consists of porosity of multiple length scales. In direct water holding applications like water storage for plant water uptake, the main interest is in micrometre-range porosity since these pores are able to store water that is easily available for plants. Gas adsorption measurements which are commonly used to characterize the physical pore structure of biochars are not able to quantify this pore-size range. While pyrogenetic porosity (i.e. pores formed during pyrolysis process) tends to increase with elevated process temperature, it is uncertain whether this change affects the pore space capable to store plant available water. In this study, we characterized biochar porosity with x-ray tomography which provides quantitative information on the micrometer-range porosity. We imaged willow dried at 60 $^ circ$C and biochar samples pyrolysed in three different temperatures (peak temperatures 308, 384, 489 $^ circ$C, heating rate 2 $^ circ$C min$^{-1}$). Samples were carefully prepared and traced through the experiments, which allowed investigation of porosity development in micrometre size range. Pore space was quantified with image analysis of x-ray tomography images and, in addition, nanoscale porosity was examined with helium ion microscopy. The image analysis results show that initial pore structure of the raw material determines the properties of micrometre-range porosity in the studied temperature range. Thus, considering the pore-size regime relevant to the storage of plant available water, pyrolysis temperature in the studied range does not provide means to optimize the biochar structure. However, these findings do not rule out that process temperature may affect the water retention properties of biochars by modifying the chemical properties of the pore surfaces.", "keywords": ["Fysiikka", "porosity", "FOS: Physical sciences", "Applied Physics (physics.app-ph)", "kuivatislaus", "01 natural sciences", "huokoisuus", "image analysis", "biochar", "ta216", "ta218", "0105 earth and related environmental sciences", "x-ray tomography", "biohiili", "Condensed Matter - Materials Science", "ta114", "Physics", "ta1182", "Materials Science (cond-mat.mtrl-sci)", "Physics - Applied Physics", "04 agricultural and veterinary sciences", "slow pyrolysis", "6. Clean water", "kuvantaminen", "kuva-analyysi", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "https://doi.org/10.1016/j.jaap.2018.07.011"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Analytical%20and%20Applied%20Pyrolysis", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jaap.2018.07.011", "name": "item", "description": "10.1016/j.jaap.2018.07.011", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jaap.2018.07.011"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-09-01T00:00:00Z"}}, {"id": "10.1007/978-3-031-12176-0_11", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:14:31Z", "type": "Report", "created": "2022-11-28", "title": "Integrating X-ray CT Data into Models", "description": "Open AccessXP is a Mar\u00eda Zambrano Fellow at the Public University of Navarra (UPNA) and acknowledges funding from the European Union - NextGenerationEU through the Spanish program 'Ayuda para la Recualificaci\u00f3n del Sistema Universitario Espa\u00f1ol'. AE acknowledges funding from Swiss National Science Foundation: Grants P2EZP2 175128 and P400PB_186751. TR was funded by ERC Consolidator grant 646809 DIMR.", "keywords": ["2. Zero hunger", "570", "550", "X-Ray computed tomography", "[INFO.INFO-MO] Computer Science [cs]/Modeling and Simulation", "Soil properties", "[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study", "15. Life on land", "[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil study", "[INFO.INFO-MO]Computer Science [cs]/Modeling and Simulation", "6. Clean water"], "contacts": [{"organization": "Portell, Xavier, Pot, Valerie, Ebrahimi, Ali, Monga, Olivier, Roose, Tiina,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1007/978-3-031-12176-0_11"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/978-3-031-12176-0_11", "name": "item", "description": "10.1007/978-3-031-12176-0_11", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/978-3-031-12176-0_11"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "10.17863/cam.81466", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:58Z", "type": "Journal Article", "created": "2022-01-19", "title": "Multimodal correlative imaging and modelling of phosphorus uptake from soil by hyphae of mycorrhizal fungi", "description": "Summary<p>   <p>Phosphorus (P) is essential for plant growth. Arbuscular mycorrhizal fungi (AMF) aid its uptake by acquiring P from sources distant from roots in return for carbon. Little is known about how AMF colonise soil pore\uffe2\uff80\uff90space, and models of AMF\uffe2\uff80\uff90enhanced P\uffe2\uff80\uff90uptake are poorly validated.</p>  <p>We used synchrotron X\uffe2\uff80\uff90ray computed tomography to visualize mycorrhizas in soil and synchrotron X\uffe2\uff80\uff90ray fluorescence/X\uffe2\uff80\uff90ray absorption near edge structure (XRF/XANES) elemental mapping for P, sulphur (S) and aluminium (Al) in combination with modelling.</p>  <p>We found that AMF inoculation had a suppressive effect on colonisation by other soil fungi and identified differences in structure and growth rate between hyphae of AMF and nonmycorrhizal fungi. Our results showed that AMF co\uffe2\uff80\uff90locate with areas of high P and low Al, and preferentially associate with organic\uffe2\uff80\uff90type P species over Al\uffe2\uff80\uff90rich inorganic P.</p>  <p>We discovered that AMF avoid Al\uffe2\uff80\uff90rich areas as a source of P. Sulphur\uffe2\uff80\uff90rich regions were found to be correlated with higher hyphal density and an increased organic\uffe2\uff80\uff90associated P\uffe2\uff80\uff90pool, whilst oxidized S\uffe2\uff80\uff90species were found close to AMF hyphae. Increased S oxidation close to AMF suggested the observed changes were microbiome\uffe2\uff80\uff90related. Our experimentally\uffe2\uff80\uff90validated model led to an estimate of P\uffe2\uff80\uff90uptake by AMF hyphae that is an order of magnitude lower than rates previously estimated \uffe2\uff80\uff93 a result with significant implications for the modelling of plant\uffe2\uff80\uff93soil\uffe2\uff80\uff93AMF interactions.</p>  </p>", "keywords": ["580", "X-ray computed tomography", "570", "Research", "X-ray fluorescence", "Fungi", "Hyphae", "500", "Phosphorus", "mycorrhizas", "04 agricultural and veterinary sciences", "15. Life on land", "plant phosphorus uptake", "Plant Roots", "Soil", "rhizosphere modelling", "Mycorrhizae", "synchrotron", "0401 agriculture", " forestry", " and fisheries", "Soil Microbiology"]}, "links": [{"href": "https://eprints.soton.ac.uk/454110/1/Keyes_et_al_Myco_Paper_TR_04_01_2022_unmarked.pdf"}, {"href": "https://eprints.soton.ac.uk/454110/2/Figures_TR_22_12_2021.pdf"}, {"href": "https://eprints.soton.ac.uk/454110/3/SI_1_TR_22_12_2021_no_markup.pdf"}, {"href": "https://eprints.soton.ac.uk/454110/4/SI_2_TR_22_12_2021.pdf"}, {"href": "https://doi.org/10.17863/cam.81466"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.17863/cam.81466", "name": "item", "description": "10.17863/cam.81466", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.17863/cam.81466"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-15T00:00:00Z"}}, {"id": "10.1098/rsif.2017.0560", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:18:31Z", "type": "Journal Article", "created": "2017-11-08", "title": "Measurement of micro-scale soil deformation around roots using four-dimensional synchrotron tomography and image correlation", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>This study applied time lapse (four-dimensional) synchrotron X-ray computed tomography to observe micro-scale interactions between plant roots and soil. Functionally contrasting maize root tips were repeatedly imaged during ingress into soil columns of varying water content and compaction. This yielded sequences of three-dimensional densiometric data, representing time-resolved geometric soil and root configurations at the micronmetre scale. These data were used as inputs for two full-field kinematic quantification methods, which enabled the analysis of three-dimensional soil deformation around elongating roots. Discrete object tracking was used to track rigid mineral grains, while continuum digital volume correlation was used to track grey-level patterns within local sub-volumes. These techniques both allowed full-field soil displacements to be quantified at an intra-rhizosphere spatial sampling scale of less than 300 \u00b5m. Significant differences in deformation mechanisms were identified around different phenotypes under different soil conditions. A uniquely strong contrast was observed between intact and de-capped roots grown in dry, compacted soil. This provides evidence that functional traits of the root cap significantly reduce the amount of soil disturbance per unit of root elongation, with this effect being particularly significant in drier soil.</p></article>", "keywords": ["2. Zero hunger", "0301 basic medicine", "Soil", "0303 health sciences", "03 medical and health sciences", "15. Life on land", "Tomography", " X-Ray Computed", "Plant Roots", "Zea mays", "Synchrotrons"]}, "links": [{"href": "https://royalsocietypublishing.org/doi/pdf/10.1098/rsif.2017.0560"}, {"href": "https://doi.org/10.1098/rsif.2017.0560"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20The%20Royal%20Society%20Interface", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1098/rsif.2017.0560", "name": "item", "description": "10.1098/rsif.2017.0560", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1098/rsif.2017.0560"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-11-01T00:00:00Z"}}, {"id": "10.1007/s11104-016-2872-7", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:15:18Z", "type": "Journal Article", "created": "2016-04-08", "title": "Challenges in imaging and predictive modeling of rhizosphere processes", "description": "Background: Plant-soil interaction is central to human food production and ecosystem function. Thus, it is essential to not only understand, but also to develop predictive mathematical models which can be used to assess how climate and soil management practices will affect these interactions. Scope: In this paper we review the current developments in structural and chemical imaging of rhizosphere processes within the context of multiscale mathematical image based modeling. We outline areas that need more research and areas which would benefit from more detailed understanding. Conclusions: We conclude that the combination of structural and chemical imaging with modeling is an incredibly powerful tool which is fundamental for understanding how plant roots interact with soil. We emphasize the need for more researchers to be attracted to this area that is so fertile for future discoveries. Finally, model building must go hand in hand with experiments. In particular, there is a real need to integrate rhizosphere structural and chemical imaging with modeling for better understanding of the rhizosphere processes leading to models which explicitly account for pore scale processes.", "keywords": ["2. Zero hunger", "X-ray CT", "Dewey Decimal Classification::500 | Naturwissenschaften::570 | Biowissenschaften", " Biologie", "Soil Science", "Plant Science", "Chemical mapping", "04 agricultural and veterinary sciences", "15. Life on land", "Dewey Decimal Classification::500 | Naturwissenschaften::580 | Pflanzen (Botanik)", "13. Climate action", "Rhizosphere", "0401 agriculture", " forestry", " and fisheries", "Mathematical modeling", "Correlative imaging"]}, "links": [{"href": "https://eprints.soton.ac.uk/390303/1/Roose%2520et%2520al%25202016%2520Plant%2520Soil%2520Marschner%2520Review%2520Accepted.pdf"}, {"href": "https://doi.org/10.1007/s11104-016-2872-7"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11104-016-2872-7", "name": "item", "description": "10.1007/s11104-016-2872-7", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11104-016-2872-7"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-04-08T00:00:00Z"}}, {"id": "10.1007/s11356-017-8823-x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:15:22Z", "type": "Journal Article", "created": "2017-03-24", "title": "Quantitative characterization of pore structure of several biochars with 3D imaging", "description": "Open Access16 pages, 4 figures. The final publication is available at Springer via http://dx.doi.org/10.1007/s11356-017-8823-x", "keywords": ["x-ray tomography", "Condensed Matter - Materials Science", "soil amendment", "pore structure", "ta1171", "ta1182", "Water", "Materials Science (cond-mat.mtrl-sci)", "FOS: Physical sciences", "04 agricultural and veterinary sciences", "01 natural sciences", "6. Clean water", "Diffusion", "Imaging", " Three-Dimensional", "image analysis", "Charcoal", "Image Processing", " Computer-Assisted", "0401 agriculture", " forestry", " and fisheries", "biochar", "Porosity", "soil amendments", "ta218", "water retention", "0105 earth and related environmental sciences"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s11356-017-8823-x.pdf"}, {"href": "https://doi.org/10.1007/s11356-017-8823-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20and%20Pollution%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11356-017-8823-x", "name": "item", "description": "10.1007/s11356-017-8823-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11356-017-8823-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-03-24T00:00:00Z"}}, {"id": "10.1007/s11538-017-0350-x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:15:25Z", "type": "Journal Article", "created": "2017-10-13", "title": "An Explicit Structural Model of Root Hair and Soil Interactions Parameterised by Synchrotron X-ray Computed Tomography", "description": "The rhizosphere is a zone of fundamental importance for understanding the dynamics of nutrient acquisition by plant roots. The canonical difficulty of experimentally investigating the rhizosphere led long ago to the adoption of mathematical models, the most sophisticated of which now incorporate explicit representations of root hairs and rhizosphere soil. Mathematical upscaling regimes, such as homogenisation, offer the possibility of incorporating into larger-scale models the important mechanistic processes occurring at the rhizosphere scale. However, we lack concrete descriptions of all the features required to fully parameterise models at the rhizosphere scale. By combining synchrotron X-ray computed tomography (SRXCT) and a novel root growth assay, we derive a three-dimensional description of rhizosphere soil structure suitable for use in multi-scale modelling frameworks. We describe an approach to mitigate sub-optimal root hair detection via structural root hair growth modelling. The growth model is explicitly parameterised with SRXCT data and simulates three-dimensional root hair ideotypes in silico, which are suitable for both ideotypic analysis and parameterisation of 3D geometry in mathematical models. The study considers different hypothetical conditions governing root hair interactions with soil matrices, with their respective effects on hair morphology being compared between idealised and image-derived soil/root geometries. The studies in idealised geometries suggest that packing arrangement of soil affects hair tortuosity more than the particle diameter. Results in field-derived soil suggest that hair access to poorly mobile nutrients is particularly sensitive to the physical interaction between the growing hairs and the phase of the soil in which soil water is present (i.e. the hydrated textural phase). The general trends in fluid-coincident hair length with distance from the root, and their dependence on hair/soil interaction mechanisms, are conserved across Cartesian and cylindrical geometries.", "keywords": ["2. Zero hunger", "0301 basic medicine", "0303 health sciences", "Mathematical Concepts", "15. Life on land", "Models", " Biological", "Plant Roots", "Soil", "03 medical and health sciences", "Imaging", " Three-Dimensional", "Rhizosphere", "Original Article", "Computer Simulation", "Tomography", " X-Ray Computed", "Synchrotrons"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s11538-017-0350-x.pdf"}, {"href": "https://doi.org/10.1007/s11538-017-0350-x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bulletin%20of%20Mathematical%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s11538-017-0350-x", "name": "item", "description": "10.1007/s11538-017-0350-x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s11538-017-0350-x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-10-13T00:00:00Z"}}, {"id": "10.1016/j.biombioe.2018.10.004", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:15:55Z", "type": "Journal Article", "created": "2018-10-11", "title": "How and why does willow biochar increase a clay soil water retention capacity?", "description": "Abstract   Addition of biochar into a soil changes its water retention properties by modifying soil textural and structural properties. In addition, internal micrometer-scale porosity that is able to directly store readily plant available water affects soil water retention properties. This study shows how precise knowledge of the internal micrometer-scale pore size distribution of biochar can deepen the understanding of the biochar-water interactions in soils. The micrometer-scale porosity of willow biochar was quantitatively and qualitatively characterized using X-ray tomography, 3D image analysis and Helium ion microscopy. The effect of biochar application on clay soil water retention was studied by conventional water retention curve approach. The results indicate that the internal pores of biochar, with sizes of at 50 and 10\u202f\u03bcm (equivalent pore diameter), increased soil porosity and the amount of readily plant available water. After biochar addition, changes in soil porosity were detected at pore size regimes 5\u201310 and 25\u202f\u03bcm, i.e. biochar pore sizes multiplied by factor 0.5. The detected pore size distribution of biochar does not predict directly (1:1 compatibility) the changes observed in the soil moisture characteristics. It is likely that biochar chemistry and pore morphology affect biochar-water interactions via e.g. surface roughness and contact angle. In addition, biochar induced changes in soil structure and texture affected soil moisture characteristics. However, the approach presented is an attractive pathway to more generalized understanding on how and why biochar internal porosity affects soil moisture characteristics.", "keywords": ["570", "Fysiikka", "ta1171", "mikroskopia", "savi", "01 natural sciences", "630", "huokoisuus", "soil water retention", "tomografia", "219", "3D image analysis", "biochar", "3D-mallinnus", "ta216", "ta218", "219 Environmental biotechnology", "0105 earth and related environmental sciences", "x-ray tomography", "biohiili", "maaper\u00e4", "ta114", "Physics", "ta1182", "04 agricultural and veterinary sciences", "15. Life on land", "6. Clean water", "mikrorakenteet", "plant available water", "helium ion microscopy", "0401 agriculture", " forestry", " and fisheries", "vesipitoisuus", "X-ray tomography"]}, "links": [{"href": "https://doi.org/10.1016/j.biombioe.2018.10.004"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biomass%20and%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.biombioe.2018.10.004", "name": "item", "description": "10.1016/j.biombioe.2018.10.004", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.biombioe.2018.10.004"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-12-01T00:00:00Z"}}, {"id": "10.1016/j.dib.2019.104394", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:04Z", "type": "Journal Article", "created": "2019-08-23", "title": "Experimental data of bio self-healing concrete incubated in saturated natural soil", "description": "The provision of suitable incubation environments is vital for successful implementation of bio self-healing concrete (bio-concrete). We investigated the effect of soil incubation to examine if the self-healing process can be activated in comparison with the conventional incubation environment (water). The data was collected from laboratory-scale experiments conducted on mortar specimens. The mortar was impregnated with Bacillus subtilis and this bacteria was encapsulated in calcium alginate for protection from the production process. The mortar specimens were mechanically cracked and then incubated within fine-grained fully saturated natural soil for about 4 weeks. The cracks were inspected before and after incubation by light microscopy to evaluate the healing ratio. The mineral precipitations on crack surfaces were examined by Scanning Electron Microscope (SEM) and Energy Dispersive X-Ray Spectrometry (EDX). The data reflects the efficiency of bio-concrete for certain structures such as tunnels and deep foundation, where concrete elements are exposed to ground conditions.", "keywords": ["Scanning Electron Microscope (SEM)", "Q1-390", "Soil incubation", "Science (General)", "Bacteria", "Computer applications to medicine. Medical informatics", "Energy Dispersive X-Ray Spectrometry (EDX)", "R858-859.7", "0211 other engineering and technologies", "Self-healing concrete", "02 engineering and technology", "Construction and Architecture", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.dib.2019.104394"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Data%20in%20Brief", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.dib.2019.104394", "name": "item", "description": "10.1016/j.dib.2019.104394", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.dib.2019.104394"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-10-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2008.11.050", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:13Z", "type": "Journal Article", "created": "2009-01-19", "title": "Ion Activity And Distribution Of Heavy Metals In Acid Mine Drainage Polluted Subtropical Soils", "description": "The oxidative dissolution of mine wastes gives rise to acidic, metal-enriched mine drainage (AMD) and has typically posed an additional risk to the environment. The poly-metallic mine Dabaoshan in South China is an excellent test site to understand the processes affecting the surrounding polluted agricultural fields. Our objectives were firstly to investigate metal ion activity in soil solution, distribution in solid constituents, and spatial distribution in samples, secondly to determine dominant environment factors controlling metal activity in the long-term AMD-polluted subtropical soils. Soil Column Donnan Membrane Technology (SC-DMT) combined with sequential extraction shows that unusually large proportion of the metal ions are present as free ion in the soil solutions. The narrow range of low pH values prevents any pH effects during the binding onto oxides or organic matter. The differences in speciation of the soil solutions may explain the different soil degradation observed between paddy and non-paddy soils.", "keywords": ["China", "Time Factors", "550", "Speciation", "0211 other engineering and technologies", "Industrial Waste", "02 engineering and technology", "Chemical Fractionation", "01 natural sciences", "Mining", "Soil", "Acid mine drainage", "X-Ray Diffraction", "Metals", " Heavy", "Soil Pollutants", "Humic Substances", "0105 earth and related environmental sciences", "Ions", "Hydrogen-Ion Concentration", "15. Life on land", "6. Clean water", "Tropical soils", "13. Climate action", "[SDU.STU] Sciences of the Universe [physics]/Earth Sciences", "Sorption", "Free ion", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2008.11.050"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2008.11.050", "name": "item", "description": "10.1016/j.envpol.2008.11.050", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2008.11.050"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-04-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2016.11.048", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:14Z", "type": "Journal Article", "created": "2016-11-19", "title": "Influence of bacterial extracellular polymeric substances on the sorption of Zn on \u03b3-alumina: A combination of FTIR and EXAFS studies", "description": "Extracellular polymeric substances (EPS) isolated from bacteria, are abound of functional groups which can react with metals and consequently influence the immobilization of metals. In this study, we combined with Zn K-edge Extended X-ray Absorption Fine Structure (EXAFS), Fourier Transform Infrared (FTIR) spectroscopy, and High-Resolution Transmission Electron Microscopy (HRTEM) techniques to study the effects of EPS isolated from Bacillus subtilis and Pseudomonas putida on Zn sorption on \u03b3-alumina. The results revealed that Zn sorption on aluminum oxide was pH-dependent and significantly influenced by bacterial EPS. At pH 7.5, Zn sorbed on \u03b3-alumina was in the form of Zn-Al layered doubled hydroxide (LDH) precipitates, whereas at pH 5.5, Zn sorbed on \u03b3-alumina was as a Zn-Al bidentate mononuclear surface complex. The amount of sorbed Zn at pH 7.5 was 1.3-3.7 times higher than that at pH 5.5. However, in the presence of 2\u00a0g\u00a0L-1 EPS, regardless of pH conditions and EPS source, Zn\u00a0+\u00a0EPS + \u03b3-alumina ternary complex was formed on the surface of \u03b3-alumina, which resulted in decreased Zn sorption (reduced by 8.4-67.8%) at pH 7.5 and enhanced Zn sorption (increased by 10.0-124.7%) at pH 5.5. The FTIR and EXAFS spectra demonstrated that both the carboxyl and phosphoryl moieties of EPS were crucial in this process. These findings highlight EPS effects on Zn interacts with \u03b3-alumina.", "keywords": ["Polymers", "Pseudomonas putida", "0211 other engineering and technologies", "02 engineering and technology", "Hydrogen-Ion Concentration", "01 natural sciences", "Zinc", "X-Ray Absorption Spectroscopy", "Spectroscopy", " Fourier Transform Infrared", "Aluminum Oxide", "Hydroxides", "Adsorption", "Bacillus subtilis", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2016.11.048"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2016.11.048", "name": "item", "description": "10.1016/j.envpol.2016.11.048", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2016.11.048"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-01-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2019.05.106", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:14Z", "type": "Journal Article", "created": "2019-05-21", "title": "Bioturbation of Ag2S-NPs in soil columns by earthworms", "description": "Sewage sludge contains Ag2S-NPs causing NP exposure of soil fauna when sludge is applied as soil amendment. Earthworm bioturbation is an important process affecting many soil functions. Bioturbation may be affected by the presence of Ag2S-NPs, but the earthworm activity itself may also influence the displacement of these NPs that otherwise show little transport in the soil. The aim of this study was to determine effects of Ag2S-NPs on earthworm bioturbation and effect of this bioturbation on the vertical distribution of Ag2S-NPs. Columns (12\u202fcm) of a sandy loamy soil with and without Lumbricus rubellus were prepared with and without 10\u202fmg Ag kg-1, applied as Ag2S-NPs in the top 2\u202fcm of the soil, while artificial rainwater was applied at \u223c1.2\u202fmm day-1. The soil columns were sampled at three depths weekly for 28 days and leachate collected from the bottom. Total Ag measurements showed more displacement of Ag to deeper soil layers in the columns with earthworms. The application of rain only did not significantly affect Ag transport in the soil. No Ag was detected in column leachates. X-ray tomography showed that changes in macro porosity and pore size distribution as a result of bioturbation were not different between columns with and without Ag2S-NPs. Earthworm activity was therefore not affected by Ag2S-NPs at the used exposure concentration. Ag concentrations along the columns and the earthworm density allowed the calculation of the bioturbation rate. The effect on the Ag transport in the soil shows that earthworm burrowing activity is a relevant process that must be taken into account when studying the fate of nanoparticles in soils.", "keywords": ["Silver", "Sewage", "Tomography", " X-Ray", "Transport", "Metal Nanoparticles", "earthworms", "15. Life on land", "01 natural sciences", "6. Clean water", "soil", "Soil", "13. Climate action", "bioturbation", "transport", "Earthworms", "Nanoparticles", "Animals", "Soil Pollutants", "nanoparticles", "Bioturbation", "Oligochaeta", "SDG 6 - Clean Water and Sanitation", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2019.05.106"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2019.05.106", "name": "item", "description": "10.1016/j.envpol.2019.05.106", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2019.05.106"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-09-01T00:00:00Z"}}, {"id": "10.1016/j.envpol.2021.116897", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:15Z", "type": "Journal Article", "created": "2021-03-13", "title": "X-ray absorption spectroscopy evidence of sulfur-bound cadmium in the Cd-hyperaccumulator Solanum nigrum and the non-accumulator Solanum melongena", "description": "It has been proposed that non-protein thiols and organic acids play a major role in cadmium phytoavailability and distribution in plants. In the Cd-hyperaccumulator Solanum nigrum and non-accumulator Solanum melongena, the role of these organic ligands in the accumulation and detoxification mechanisms of Cd are debated. In this study, we used X-ray absorption spectroscopy to investigate Cd speciation in these plants (roots, stem, leaves) and in the soils used for their culture to unravel the plants responses to Cd exposure. The results show that Cd in the 100\u00a0mg\u00a0kg-1 Cd-doped clayey loam soil is sorbed onto iron oxyhydroxides. In both S.\u00a0nigrum and S.\u00a0melongena, Cd in roots and fresh leaves is mainly bound to thiol ligands, with a small contribution of inorganic S ligands in S.\u00a0nigrum leaves. We interpret the Cd binding to sulfur ligands as detoxification mechanisms, possibly involving the sequestration of Cd complexed with glutathione or phytochelatins in the plant vacuoles. In the stems, results show an increase binding of Cd to -O ligands (>50% for S.\u00a0nigrum). We suggest that Cd is partly complexed by organic acids for transportation in the sap.", "keywords": ["[SDE] Environmental Sciences", "0106 biological sciences", "570", "[CHIM.ANAL] Chemical Sciences/Analytical chemistry", "Speciation", "Plant Roots", "01 natural sciences", "[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics", "[SDU.STU.GC] Sciences of the Universe [physics]/Earth Sciences/Geochemistry", "[SDE.ES] Environmental Sciences/Environment and Society", "Soil Pollutants", "Solanum melongena", "Solanaceae", "Solanum nigrum", "0105 earth and related environmental sciences", "580", "Toxicity", "X-Ray absorption spectroscopy", "[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics", "3. Good health", "Biodegradation", " Environmental", "X-Ray Absorption Spectroscopy", "13. Climate action", "[SDE]Environmental Sciences", "[SDU.STU] Sciences of the Universe [physics]/Earth Sciences", "Sulfur", "Cadmium"]}, "links": [{"href": "https://doi.org/10.1016/j.envpol.2021.116897"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.envpol.2021.116897", "name": "item", "description": "10.1016/j.envpol.2021.116897", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.envpol.2021.116897"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "10.1155/2018/9736547", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:18Z", "type": "Journal Article", "created": "2018-05-09", "title": "Chronological Classification of Ancient Mortars Employing Spectroscopy and Spectrometry Techniques: Sagunto (Valencia, Spain) Case", "description": "<p>Forty-two mortar samples, from two archaeological excavations located in Sagunto (Valencian Community, Spain), were analysed by both portable energy dispersive X-ray fluorescence spectroscopy (pED-XRF) and inductively coupled plasma mass spectrometry (ICP-MS) to determine major and minor elements and traces including rare earth elements (REEs). Collected data were crossed with those previously obtained from Sagunto Castle mortars, and principal component analysis (PCA) was applied to discriminate the construction phases of the unearthed buildings. REE permitted to ascribe most of the masonries to the Roman Imperial period. Moreover, a statistical model was built by employing partial least squares discriminant analysis (PLS-DA) in order to classify the mortars from Roman Imperial period and from Islamic period due to the problematic overlapping between these two phases. Results confirmed the effectiveness of the developed indirect chronology method, based on REE data, to discriminate among historic mortars from different construction periods on a wide scale including different Sagunto archaeological sites.</p>", "keywords": ["2. Zero hunger", "0601 history and archaeology", "QC350-467", "06 humanities and the arts", "Optics. Light", "energy dispersive X-ray fluorescence spectroscopy (pED-XRF); inductively coupled plasma mass spectrometry (ICP-MS)", "Analytical Chemistry; Atomic and Molecular Physics", " and Optics; Spectroscopy"]}, "links": [{"href": "https://eprints.whiterose.ac.uk/130462/1/9736547.pdf"}, {"href": "https://iris.unica.it/bitstream/11584/248342/2/Ramacciotti%20et%20al%202018.pdf"}, {"href": "https://arpi.unipi.it/bitstream/11568/935316/1/P101%20Chronological%20Classification%20of%20Ancient%20Mortars.pdf"}, {"href": "https://doi.org/10.1155/2018/9736547"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Spectroscopy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1155/2018/9736547", "name": "item", "description": "10.1155/2018/9736547", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1155/2018/9736547"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-01-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2015.04.019", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:33Z", "type": "Journal Article", "created": "2015-04-27", "title": "Application of smoothed particle hydrodynamics (SPH) and pore morphologic model to predict saturated water conductivity from X-ray CT imaging in a silty loam Cambisol", "description": "20 This study aims to estimate saturated hydraulic conductivity in a silty loam soil and compare modelled data with 21 experimental ones. The flow characteristics of twelve undisturbed soil cores (5 cm in diameter \u00d7 6 cm high) were 22 measured in the laboratory after performing X-ray computed microtomography (microCT) analysis. MicroCT 3D 23 imaging was integrated with an existing pore morphologic model and a numerical simulation based on mesh-24 free smoothed particle hydrodynamics (SPH) to calculate the water flow through the macropore network 25 (pores N 40 \u03bcm). Results showed that the proposed SPH method was able to predict hydraulic conductivity of 26 large-sized samples as falling in the range of the experimental ones. By contrast the morphologic model generally 27 underestimated the water flow and was slightly affected by the pore shape. Increasing microCT imaging resolu-28 tion and expanding the variability with other soil types will improve the understanding of the role of micropore 29 size and morphology on water conductivity. 30", "keywords": ["2. Zero hunger", "550", "[ SDV.SA.SDS ] Life Sciences [q-bio]/Agricultural sciences/Soil study", "0207 environmental engineering", "600", "04 agricultural and veterinary sciences", "02 engineering and technology", "Pore size distribution", "[ SDE.IE ] Environmental Sciences/Environmental Engineering", "Saturated hydraulic conductivity", "Soil structure", "0401 agriculture", " forestry", " and fisheries", "[ SDU.STU.HY ] Sciences of the Universe [physics]/Earth Sciences/Hydrology", "X-ray computed microtomography"]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2015.04.019"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2015.04.019", "name": "item", "description": "10.1016/j.geoderma.2015.04.019", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2015.04.019"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-10-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2025.117290", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:35Z", "type": "Journal Article", "created": "2025-04-11", "title": "Soil structural indicators as predictors of biological activity under various soil management practices", "description": "Soil structure is a key feature in controlling the turnover of organic matter in soils. The spatial arrangement of solids and pores in agricultural topsoil can be actively influenced by management practices, such as tillage and cropping systems, which in turn can affect the resident microbial communities and their activities. However, carbon mineralisation and microbial activity are usually measured in sieved samples, which provides information on gross potentials under optimal conditions. Under these conditions, the spatial heterogeneities that are specific to different management practices are reduced or totally removed. In this study, we combined X-ray computer tomography (X-ray CT) and isothermal calorimetry to investigate the effect of soil structure on heat dissipation, as an indicator of biological activity. Samples were collected from the topsoil of a long-term field experiment (12\u00a0years) that included four different land uses: conventional vs. reduced tillage, each with either maize or winter wheat as the main crop in the rotation. We compared the response of undisturbed soil cores (3\u00a0cm in height, 2.7\u00a0cm in diameter) to the addition of water and glucose in specific pore sizes, ranging in radii of 15 to 75\u00a0\u00b5m or 3 to 75\u00a0\u00b5m. The pore structure and indicators of particulate organic material were quantified using X-ray CT with a voxel resolution of 15\u00a0\u00b5m. This allowed us to distinguish between the effects of crop rotation and tillage regime on biological activity, soil structure and the feedback between the two. Heat dissipation correlated significantly with X-ray CT derived porosity, pore surface density and soil matrix grey value, all of which were affected by both tillage regime and crop rotation. Heat dissipation in maize plots after glucose addition to the pore size range with radii of 3 to 75\u00a0\u00b5m was greater than in the winter wheat systems, but not when added to the pore size range with radii of 15 to 75\u00a0\u00b5m. The study showed that structural indicators can explain up to 81\u00a0% and 95\u00a0% of the variance in total heat dissipation after glucose and water addition, respectively, but only 60\u00a0% of the heat dynamics, here defined as the time taken for 50\u00a0% of total heat to be dissipated. The results emphasise the importance of soil structure in regulating microbial decomposition of soil organic matter and warrants further investigations.", "keywords": ["X-ray CT", "Crop rotation", "Biological activity", "Science", "Soil structure", "Q", "[SDU.STU] Sciences of the Universe [physics]/Earth Sciences", "Soil Science", "Tillage regime", "Micro-habitat", "Calorimetry"]}, "links": [{"href": "https://pub.epsilon.slu.se/37077/1/leuther-f-et-al-20250508.pdf"}, {"href": "https://doi.org/10.1016/j.geoderma.2025.117290"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2025.117290", "name": "item", "description": "10.1016/j.geoderma.2025.117290", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2025.117290"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2025.117299", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:35Z", "type": "Journal Article", "created": "2025-04-19", "title": "Synchrotron-based 3D X-ray computed tomography reveals root system architecture: Plastic responses to phosphorus placement", "description": "We used synchrotron-based X-ray computed tomography (SRXCT) to visualize root distribution in soil cores. X-ray CT is emerging as a leading technique to study plant roots, but SRXCT offers potential advantages compared with conventional X-ray sources, including producing X-rays of higher intensity that are collimated, monochromatic and tuneable; delivering high-resolution data whilst avoiding issues such as beam-hardening and source divergence. We demonstrate the suitability of SRXCT for observing the root system of wheat plants growing in two soils (Calcisol and Ultisol) in response to placement of different phosphorus fertilisers. To optimize scanning quality, we tested the use of an inverse \u2018mask\u2019 in front of the soil cores to achieve a more uniform attenuation along the sample, thereby avoiding saturation of the detector along the thinnest parts of the soil cores. Secondly, we developed a deep learning approach for segmentation and quantification of root length and diameter. Our results demonstrate the use of SRXCT as a tool for studying root system architecture in soil at high spatial resolution. The SRXCT method marks a new stride towards advancing our understanding of root structures in unprecedented detail, opening further avenues for exploring plant-soil interactions.", "keywords": ["X-ray computed tomography", "Image segmentation", "Plant roots", "Root system architecture", "Soil phosphorus", "Science", "Q", "Root distribution", "Synchrotron"]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2025.117299"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2025.117299", "name": "item", "description": "10.1016/j.geoderma.2025.117299", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2025.117299"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-01T00:00:00Z"}}, {"id": "10.1016/j.jasrep.2019.03.017", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:39Z", "type": "Journal Article", "created": "2019-03-25", "title": "Chemical and mineralogical analyses on stones from Sagunto Castle (Spain)", "description": "For the first time, an archaeometric study was carried out on the carbonate rock ashlars of the Sagunto Castle. The studied site is one of the most important and best preserved Spanish archaeological and architectural monuments, characterized by different construction phases from the Roman period to Modern Ages. Forty samples collected from thirteen different structures of Sagunto Castle and two quarries, located in the Sagunto's hill were used for comparative purposes. The samples were analyzed by X-ray diffraction, X-ray fluorescence and inductively coupled plasma mass spectrometry to determine their mineralogical and elemental composition. The obtained data show similar chemical and mineralogical features between the rocks outcropping in the city quarries and some of those employed to build the structures, suggesting that rocks could have been used to build the structures from different periods along the centuries.", "keywords": ["Building stone; Chemistry; Fortress; Middle ages; Mineralogy; Remains; Roman period", "Building stone; Fortress; Remains; Chemistry; Mineralogy; Roman period; Middle ages", "archaeometrics; carbonate rock ashlars; X-ray fluorescence and inductively coupled plasma mass spectrometry", "01 natural sciences", "0104 chemical sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://iris.unica.it/bitstream/11584/298931.2/3/Ramaciotti%20et%20al%202018_1-s2.0-S2352409X18307454-main.pdf"}, {"href": "https://doi.org/10.1016/j.jasrep.2019.03.017"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Archaeological%20Science%3A%20Reports", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jasrep.2019.03.017", "name": "item", "description": "10.1016/j.jasrep.2019.03.017", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jasrep.2019.03.017"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-04-01T00:00:00Z"}}, {"id": "10.1021/acsearthspacechem.3c00174", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-07-25T16:17:31Z", "type": "Journal Article", "created": "2024-01-25", "title": "Structural Effects of Aluminum and Iron Occupancy in Minerals of the Jarosite-Alunite Solid Solution", "description": "Open AccessISSN:2472-3452", "keywords": ["Mo\u0308ssbauer spectroscopy", "Raman spectroscopy", "atom substitution", "energy dispersive X-ray spectroscopy", "Raman spectroscopy; energy dispersive X-ray spectroscopy; X-ray diffraction; atom substitution; Mo\u0308ssbauer spectroscopy", "X-ray diffraction"]}, "links": [{"href": "https://pubs.acs.org/doi/pdf/10.1021/acsearthspacechem.3c00174"}, {"href": "https://doi.org/10.1021/acsearthspacechem.3c00174"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/ACS%20Earth%20and%20Space%20Chemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1021/acsearthspacechem.3c00174", "name": "item", "description": "10.1021/acsearthspacechem.3c00174", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1021/acsearthspacechem.3c00174"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-25T00:00:00Z"}}, {"id": "10.1016/j.jcs.2019.102829", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:16:40Z", "type": "Journal Article", "created": "2019-09-06", "title": "Morpho-densitometric traits for quinoa (Chenopodium quinoa Willd.) seed phenotyping by two X-ray micro-CT scanning approaches", "description": "Recent studies are increasingly focusing on quinoa (Chenopodium quinoa) as a high-quality protein-rich food source and, in general, on seed quality. This latter is a complex trait difficult to characterize with standard measurements or analyses. X-ray micro-CT allows to visualise the internal structure of small objects and has been already used in seed research, mostly for maize kernel characterization. To date this technique has not yet been applied to study quinoa seeds, despite the increasing interest for their nutritional properties. The aim of this work was to explore the use of X-ray microtomography to provide new traits improving the seed phenotyping of quinoa. Two different scanning approaches have been compared: one based on the simultaneous scanning of multiple seeds (30) at lower resolution (20 ?m voxel size) and one based on the scanning of a single seed at higher resolution (2 ?m voxel size). Such approaches were tested on a study case consisting of four different quinoa genotypes. Among the measured morpho-densitometric parameters, the embryo volume and weight ratios (derived from bulk and single seed scanning, respectively) showed high positive correlation with the total protein content, while the thickest fraction of the pericarp was the best correlated with the presence of saponins.", "keywords": ["Fitomejoramiento", "2. Zero hunger", "0301 basic medicine", "0303 health sciences", "Evaluaci\u00f3n", "Rayos-X", "Seed quality", "Semillas", "Variaci\u00f3n gen\u00e9tica", "Quinua", "Per\u00fa", "03 medical and health sciences", "https://purl.org/pe-repo/ocde/ford#2.11.01", "Quinoa", "Radiaci\u00f3n", "3D image analysis", "X-ray micro-CT", "Chenopodium quinoa", "Fenotipos"]}, "links": [{"href": "https://iris.cnr.it/bitstream/20.500.14243/386031/1/prod_406462-doc_142170.pdf"}, {"href": "https://iris.cnr.it/bitstream/20.500.14243/386031/2/prod_406462-doc_142171.pdf"}, {"href": "https://iris.cnr.it/bitstream/20.500.14243/386031/4/prod_406462-doc_147996.pdf"}, {"href": "https://doi.org/10.1016/j.jcs.2019.102829"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Cereal%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jcs.2019.102829", "name": "item", "description": "10.1016/j.jcs.2019.102829", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jcs.2019.102829"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-11-01T00:00:00Z"}}, {"id": "10.1016/j.still.2012.02.007", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:17:17Z", "type": "Journal Article", "created": "2012-04-04", "title": "Long-Term Rotation And Tillage Effects On Soil Structure And Crop Yield", "description": "Tillage and rotation are fundamental factors influencing soil quality and thus the sustainability of cropping systems. Many studies have focused on the effects of either tillage or rotation, but few have quantified the long term integrated effects of both. We studied the issue using a 30-year old long-term rotation and tillage treatment experiment on a Canadian silt loam soil. Topsoil measurements were carried out for three different rotations: R1, (C\u2013C\u2013C\u2013C) continuous corn (Zea mays L.), R6, (C\u2013C\u2013O(RC), B(RC)) corn, corn, oats (Avena fatua L.) and spring barley (Hordeum vulgare L.) and R8, (C\u2013C\u2013S\u2013S) corn, corn, soybean (Glycine max L.), soybean. A red clover (Trifolium pretense L.) cover crop was under seeded in oats and spring barley in R6. In 2010, first year corn was grown in R6 and R8. The tillage treatments included no tillage, NT and mouldboard ploughing, MP. Topsoil structural quality was visually evaluated in early June and mid October. Minimal disturbed soil cores collected in early June were used for X-ray CT scanning and to quantify water content and porosity. Soil friability was determined on the soil samples using a drop shatter test. Crop yield was determined and correlated to the soil quality estimates. We found significant effect of both rotation and tillage on visual soil structure at both times of assessment. Poor soil structure was found for NT except when combined with a diverse crop rotation (R6). The soil core pore characteristics data also displayed a significant effect of tillage but only a weak insignificant effect of rotation. The drop shatter results were in accordance with the visual assessment data. Crop yield correlated significantly with the visual soil structure scores. We conclude that a diverse crop rotation was needed for an optimal performance of NT for the studied soil.", "keywords": ["2. Zero hunger", "X-ray CT", "tillage", "0401 agriculture", " forestry", " and fisheries", "soil quality", "04 agricultural and veterinary sciences", "15. Life on land", "yield", "rotation", "visual soil structure evaluation"]}, "links": [{"href": "https://doi.org/10.1016/j.still.2012.02.007"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20and%20Tillage%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.still.2012.02.007", "name": "item", "description": "10.1016/j.still.2012.02.007", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.still.2012.02.007"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-03-01T00:00:00Z"}}, {"id": "10.1021/acs.est.3c08734", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:17:30Z", "type": "Journal Article", "created": "2024-04-10", "title": "Plastic Fruit Stickers in Industrial Composting\u2500Surface and Structural Alterations Revealed by Electron Microscopy and Computed Tomography", "description": "Often large quantities of plastics are found in compost, with price look-up stickers being a major but little-explored component in the contamination path. Stickers glued to fruit or vegetable peels usually remain attached to the organic material despite sorting processes in the composting plant. Here, we investigated the effects of industrial composting on the structural alterations of these stickers. Commercial polypropylene (PP) stickers on banana peels were added to a typical organic material mixture for processing in an industrial composting plant and successfully resampled after a prerotting (11 days) and main rotting step (25 days). Afterward, both composted and original stickers were analyzed for surface and structural changes via scanning electron microscopy, Fourier-transform infrared spectroscopy, and micro- and nano-X-ray computed tomography (CT) combined with deep learning approaches. The composting resulted in substantial surface changes and degradation in the form of microbial colonization, deformation, and occurrence of cracks in all stickers. Their pore volumes increased from 16.7% in the original sticker to 26.3% at the end of the compost process. In a similar way, the carbonyl index of the stickers increased. Micro-CT images additionally revealed structural changes in the form of large adhesions that penetrated the surface of the sticker. These changes were accompanied by delamination after 25 days of composting, thus overall hinting at the degradation of the stickers and the subsequent formation of smaller microplastic pieces.", "keywords": ["Technology", "ddc:600", "ddc:550", "Composting", "600", "02 engineering and technology", "540", "Polypropylenes", "01 natural sciences", "620", "Soil", "Fruit", "Microscopy", " Electron", " Scanning", "info:eu-repo/classification/ddc/600", "Tomography", " X-Ray Computed", "0210 nano-technology", "Plastics", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://pubs.acs.org/doi/pdf/10.1021/acs.est.3c08734"}, {"href": "https://doi.org/10.1021/acs.est.3c08734"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20%26amp%3B%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1021/acs.est.3c08734", "name": "item", "description": "10.1021/acs.est.3c08734", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1021/acs.est.3c08734"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-04-10T00:00:00Z"}}, {"id": "10.1021/acs.est.4c09261", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:17:30Z", "type": "Journal Article", "created": "2024-11-04", "title": "Geochemical Decoupling of Iron and Zinc during Transformation of Zn-Bearing Ferrihydrite in Reducing Sediments", "description": "Open AccessISSN:0013-936X", "keywords": ["Geologic Sediments", "zinc carbonate", "Iron", "Mossbauer spectroscopy", "X-ray absorption spectroscopy", "mineral transformation; Mossbauer spectroscopy; X-ray absorption spectroscopy; environmental speciation; green rust; zinc sulfide; zinc carbonate", "Ferric Compounds", "Zinc", "Spectroscopy", " Mossbauer", "green rust", "X-Ray Absorption Spectroscopy", "zinc sulfide", "Oxidation-Reduction", "mineral transformation", "environmental speciation"], "contacts": [{"organization": "Lefebvre, Pierre, Grigg, Andrew R. C., Kretzschmar, Ruben,", "roles": ["creator"]}]}, "links": [{"href": "https://pubs.acs.org/doi/pdf/10.1021/acs.est.4c09261"}, {"href": "https://doi.org/10.1021/acs.est.4c09261"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20%26amp%3B%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1021/acs.est.4c09261", "name": "item", "description": "10.1021/acs.est.4c09261", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1021/acs.est.4c09261"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-11-04T00:00:00Z"}}, {"id": "10.1021/acs.est.9b07092", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:17:31Z", "type": "Journal Article", "created": "2020-02-20", "title": "Direct Visualization of Arsenic Binding on Green Rust Sulfate", "description": "'Green rust' (GR), a redox-active Fe(II)-Fe(III) layered double hydroxide, is a potential environmentally relevant mineral substrate for arsenic (As) sequestration in reduced, subsurface environments. GR phases have high As uptake capacities at circum-neutral pH conditions, but the exact interaction mechanism between the GR phases and As species is still poorly understood. Here, we documented the bonding and interaction mechanisms between GR sulfate and As species [As(III) and As(V)] under anoxic and circum-neutral pH conditions through scanning transmission electron microscopy (STEM) coupled with energy-dispersive X-ray (EDX) spectroscopy and combined it with synchrotron-based X-ray total scattering, pair distribution function (PDF) analysis, and As K-edge X-ray absorption spectroscopy (XAS). Our highly spatially resolved STEM-EDX data revealed that the preferred adsorption sites of both As(III) and As(V) are at GR crystal edges. Combining this data with differential PDF and XAS allowed us to conclude that As adsorption occurs primarily as bidentate binuclear (2C) inner-sphere surface complexes. In the As(III)-reacted GR sulfate, no secondary Fe-As phases were observed. However, authigenic parasymplesite (ferrous arsenate nanophase), exhibiting a threadlike morphology, formed in the As(V)-reacted GR sulfate and acts as an additional immobilization pathway for As(V) (\u223c87% of immobilized As). We demonstrate that only by combining high-resolution STEM imaging and EDX mapping with the bulk (differential) PDF and extended X-ray absorption fine structure (EXAFS) data can one truly determine the de facto As binding nature on GR surfaces. More importantly, these new insights into As-GR interaction mechanisms highlight the impact of GR phases on As sequestration in anoxic subsurface environments.", "keywords": ["X-Ray Absorption Spectroscopy", "Sulfates", "Adsorption", "540", "Ferric Compounds", "01 natural sciences", "6. Clean water", "Arsenic", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://eprints.whiterose.ac.uk/157636/1/acs.est.9b07092.pdf"}, {"href": "https://pubs.acs.org/doi/pdf/10.1021/acs.est.9b07092"}, {"href": "https://doi.org/10.1021/acs.est.9b07092"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20%26amp%3B%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1021/acs.est.9b07092", "name": "item", "description": "10.1021/acs.est.9b07092", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1021/acs.est.9b07092"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-02-20T00:00:00Z"}}, {"id": "10.1098/rsos.190769", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:18:31Z", "type": "Journal Article", "created": "2019-10-16", "title": "Stabilizing gold nanoparticles for use in X-ray computed tomography imaging of soil systems", "description": "<p>             This investigation establishes a system of gold nanoparticles that show good colloidal stability as an X-ray computed tomography (XCT) contrast agent under soil conditions. Gold nanoparticles offer numerous beneficial traits for experiments in biology including: comparatively minimal phytotoxicity, X-ray attenuation of the material and the capacity for functionalization. However, soil salinity, acidity and surface charges can induce aggregation and destabilize gold nanoparticles, hence in biomedical applications polymer coatings are commonly applied to gold nanoparticles to enhance stability in the             in vivo             environment. Here we first demonstrate non-coated nanoparticles aggregate in soil-water solutions. We then show coating with a polyethylene glycol (PEG) layer prevents this aggregation. To demonstrate this, PEG-coated nanoparticles were drawn through flow columns containing soil and were shown to be stable; this is in contrast with control experiments using silica and alumina-packed columns. We further determined that a suspension of coated gold nanoparticles which fully saturated soil maintained stability over at least 5 days. Finally, we used time resolved XCT imaging and image based models to approximate nanoparticle diffusion as similar to that of other typical plant nutrients diffusing in water. Together, these results establish the PEGylated gold nanoparticles as potential contrast agents for XCT imaging in soil.           </p", "keywords": ["0301 basic medicine", "0303 health sciences", "nanoparticle", "Science", "Q", "gold", "stability", "15. Life on land", "540", "contrast", "543", "soil", "03 medical and health sciences", "x-ray", "Earth Science", "14. Life underwater"]}, "links": [{"href": "https://royalsocietypublishing.org/doi/pdf/10.1098/rsos.190769"}, {"href": "https://doi.org/10.1098/rsos.190769"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Royal%20Society%20Open%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1098/rsos.190769", "name": "item", "description": "10.1098/rsos.190769", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1098/rsos.190769"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-10-01T00:00:00Z"}}, {"id": "10.1071/sr18271", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:18:08Z", "type": "Journal Article", "created": "2019-08-26", "title": "Impacts of land use on hydrodynamic properties and pore architecture of volcanic soils from the Mexican Highlands", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Volcanic soils are important resources because of their unique mineralogical and physical characteristics, and allophanic Andosols represent some of the world\u2019s most fertile soils. However, their unique properties can be lost when cultivated. Most soils in the Central Valley, Mexico, are derived from volcanic materials. This valley encompasses one of the largest water supply systems in the world by volume, but is affected by soil degradation and deforestation. Sustainably managing volcanic soils requires understanding how land use affects their hydrodynamic properties. Gas adsorption and mercury intrusion porosimetry, water retention curves, tension infiltrometry and X-ray tomography were used to describe pore structure characteristics. Two volcanic soils (one Andosol and one derived from indurated tuff \u2013 Tepetates), three land uses (maize monoculture, maize\u2013wheat rotation and fallow) and two horizons (Ap and A2 for maize monoculture and maize\u2013wheat rotation) were studied. Tillage affected topsoil by increasing the sand fraction by 38% and decreasing total porosity and macroporosity by 23% and 40% respectively. Macropore size was reduced and the number of isolated macropores was higher in the tilled layer under maize, compared with untilled subsoil. The plot under maize\u2013wheat rotation had lower allophane content, and saturated hydraulic conductivity was reduced by nearly an order of magnitude and water retention by half, compared with maize and fallow plots. Compared with Andosols, Tepetates showed differences in mineralogical composition with lower contents of amorphous compounds and in its porous network characteristics with twice the total and percolating macroporosity compared with the maize plot. Its high content of organic carbon (3.5%) seemed beneficial for its hydrodynamic properties. Sustainable agricultural management of these volcanic soils requires reducing mechanised tillage, avoiding periods when soil is bare, not applying maize\u2013wheat rotation and applying maize\u2013fallow rotation allowing natural vegetation growth.</p></article>", "keywords": ["2. Zero hunger", "550", "[SDE.MCG]Environmental Sciences/Global Changes", "04 agricultural and veterinary sciences", "15. Life on land", "630", "6. Clean water", "12. Responsible consumption", "[SDE.MCG] Environmental Sciences/Global Changes", "pore size distribution", "13. Climate action", "Andosol; pore size distribution; X-ray tomography", "0401 agriculture", " forestry", " and fisheries", "X-ray tomography", "Andosol"]}, "links": [{"href": "https://doi.org/10.1071/sr18271"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1071/sr18271", "name": "item", "description": "10.1071/sr18271", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1071/sr18271"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-01-01T00:00:00Z"}}, {"id": "10.1071/sr18293", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:18:08Z", "type": "Journal Article", "created": "2019-02-21", "title": "Orchard management and preferential flow in Andosols \u2013 comparing two kiwifruit orchards in New Zealand", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Sustainable horticulture depends on the integrity of soil functions, which directly depend on soil architecture affecting aggregation, root growth, as well as liquid and gas permeability. We hypothesised that changes in soil architecture resulting from feedback mechanisms between management, soil organic carbon contents (SOC), biota and vegetation can be captured with X-ray computed tomography (CT), and that these affect the soil filtering function, which thus, can be manipulated through orchard management. We compared the transport of copper, a widely used fungicide, through intact soil cores from vine rows of kiwifruit orchards under organic and integrated management. We first derived 3D-macropore characteristics from CT-images, followed by leaching a pulse of copper and a tracer through the same cores. The organic orchard soil had a significantly higher SOC content than the integrated orchard soil, and this was positively correlated with total porosity. Macropores (&amp;gt;92 \u00b5m) were larger with a higher connectivity, but significantly fewer in the organic than the integrated orchard soil. This resulted in a lower macroporosity and a better copper filtering capacity of the organic than the integrated orchard soil. Copper distribution was reasonably predicted when combining SOC contents, pH and macropore characteristics. Significant relationships between soil parameters and indicators of the strength of preferential flow verified that CT-derived macropore characteristics can be used to predict functional solute transport parameters. The relevance of our results and relationships observed between macropore characteristics, functional indicators of preferential flow and the fate of copper needs verification with samples representing more soils and sites.</p></article>", "keywords": ["X-ray computed tomography", "[SDE] Environmental Sciences", "2. Zero hunger", "[SDE.MCG]Environmental Sciences/Global Changes", "carbon", "computed tomography", "04 agricultural and veterinary sciences", "15. Life on land", "630", "X-ray", "kiwifruit orchard", "soil architecture", "[SDE.MCG] Environmental Sciences/Global Changes", "[SDE]Environmental Sciences", "filtering function", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "https://www.publish.csiro.au/SR/pdf/SR18293"}, {"href": "https://doi.org/10.1071/sr18293"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1071/sr18293", "name": "item", "description": "10.1071/sr18293", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1071/sr18293"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-02-22T00:00:00Z"}}, {"id": "10.1093/jxb/erv544", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:18:26Z", "type": "Journal Article", "created": "2016-01-20", "title": "Image-based modelling of nutrient movement in and around the rhizosphere", "description": "In this study, we developed a spatially explicit model for nutrient uptake by root hairs based on X-ray computed tomography images of the rhizosphere soil structure. This work extends our previous work to larger domains and hence is valid for longer times. Unlike the model used previously, which considered only a small region of soil about the root, we considered an effectively infinite volume of bulk soil about the rhizosphere. We asked the question: At what distance away from root surfaces do the specific structural features of root-hair and soil aggregate morphology not matter because average properties start dominating the nutrient transport? The resulting model was used to capture bulk and rhizosphere soil properties by considering representative volumes of soil far from the root and adjacent to the root, respectively. By increasing the size of the volumes that we considered, the diffusive impedance of the bulk soil and root uptake were seen to converge. We did this for two different values of water content. We found that the size of region for which the nutrient uptake properties converged to a fixed value was dependent on the water saturation. In the fully saturated case, the region of soil we needed to consider was only of radius 1.1mm for poorly soil-mobile species such as phosphate. However, in the case of a partially saturated medium (relative saturation 0.3), we found that a radius of 1.4mm was necessary. This suggests that, in addition to the geometrical properties of the rhizosphere, there is an additional effect of soil moisture properties, which extends further from the root and may relate to other chemical changes in the rhizosphere. The latter were not explicitly included in our model.", "keywords": ["0301 basic medicine", "550", "Oryza", "04 agricultural and veterinary sciences", "15. Life on land", "Models", " Biological", "Plant Roots", "630", "03 medical and health sciences", "Imaging", " Three-Dimensional", "Rhizosphere", "0401 agriculture", " forestry", " and fisheries", "Tomography", " X-Ray Computed", "Research Paper"]}, "links": [{"href": "https://doi.org/10.1093/jxb/erv544"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Experimental%20Botany", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1093/jxb/erv544", "name": "item", "description": "10.1093/jxb/erv544", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1093/jxb/erv544"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-01-05T00:00:00Z"}}, {"id": "10.1186/s12932-020-00066-8", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:22Z", "type": "Journal Article", "created": "2020-02-14", "title": "Effects of metal cation substitution on hexavalent chromium reduction by green rust", "description": "Abstract<p>Chromium contamination is a serious environmental issue in areas affected by leather tanning and metal plating, and green rust sulfate has been tested extensively as a potential material for in situ chemical reduction of hexavalent chromium in groundwater. Reported products and mechanisms for the reaction have varied, most likely because of green rust\uffe2\uff80\uff99s layered structure, as reduction at outer and interlayer surfaces might produce different reaction products with variable stabilities. Based on studies of Cr(III) oxidation by biogenic Mn (IV) oxides, Cr mobility in oxic soils is controlled by the solubility of the Cr(III)-bearing phase. Therefore, careful engineering of green rust properties, i.e., crystal/particle size, morphology, structure, and electron availability, is essential for its optimization as a remediation reagent. In the present study, pure green rust sulfate and green rust sulfate with Al, Mg and Zn substitutions were synthesized and reacted with identical chromate (CrO42\uffe2\uff88\uff92) solutions. The reaction products were characterized by X-ray diffraction, pair distribution function analysis, X-ray absorption spectroscopy and transmission electron microscopy and treated with synthetic \uffce\uffb4-MnO2 to assess how easily Cr(III) in the products could be oxidized. It was found that Mg substitution had the most beneficial effect on Cr lability in the product. Less than 2.5% of the Cr(III) present in the reacted Mg-GR was reoxidized by \uffce\uffb4-MnO2 within 14\uffc2\uffa0days, and the particle structure and Cr speciation observed during X-ray scattering and absorption analyses of this product suggested that Cr(VI) was reduced in its interlayer. Reduction in the interlayer lead to the linkage of newly-formed Cr(III) to hydroxyl groups in the adjacent octahedral layers, which resulted in increased structural coherency between these layers, distinctive rim domains, sequestration of Cr(III) in insoluble Fe oxide bonding environments resistant to reoxidation and partial transformation to Cr(III)-substituted feroxyhyte. Based on the results of this study of hexavalent chromium reduction by green rust sulfate and other studies, further improvements can also be made to this remediation technique by reacting chromate with a large excess of green rust sulfate, which provides excess Fe(II) that can catalyze transformation to more crystalline iron oxides, and synthesis of the reactant under alkaline conditions, which has been shown to favor chromium reduction in the interlayer of Fe(II)-bearing phyllosilicates.</p>", "keywords": ["Chromium", "550", "Geography & travel", "Remediation", "02 engineering and technology", "910", "551", "01 natural sciences", "Chromium", " Green rust", " X-ray absorption spectroscopy", " Remediation", "remediation", "500 Naturwissenschaften und Mathematik::550 Geowissenschaften", " Geologie::551 Geologie", " Hydrologie", " Meteorologie", "GE1-350", "info:eu-repo/classification/ddc/910", "QD1-999", "0105 earth and related environmental sciences", "Green rust", "X-ray absorption spectroscopy", "540", "ddc:910", "6. Clean water", "Environmental sciences", "Chemistry", "green rust", "13. Climate action", "chromium", "500 Naturwissenschaften und Mathematik::540 Chemie::540 Chemie und zugeordnete Wissenschaften", "0210 nano-technology", "Research Article"]}, "links": [{"href": "https://eprints.whiterose.ac.uk/158695/1/s12932-020-00066-8.pdf"}, {"href": "http://link.springer.com/content/pdf/10.1186/s12932-020-00066-8.pdf"}, {"href": "https://doi.org/10.1186/s12932-020-00066-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geochemical%20Transactions", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1186/s12932-020-00066-8", "name": "item", "description": "10.1186/s12932-020-00066-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1186/s12932-020-00066-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-02-14T00:00:00Z"}}, {"id": "10.1111/pce.12983", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:07Z", "type": "Journal Article", "created": "2017-05-15", "title": "Quantification of root water uptake in soil using X\u2010ray computed tomography and image\u2010based modelling", "description": "Abstract<p>Spatially averaged models of root\uffe2\uff80\uff93soil interactions are often used to calculate plant water uptake. Using a combination of X\uffe2\uff80\uff90ray computed tomography (CT) and image\uffe2\uff80\uff90based modelling, we tested the accuracy of this spatial averaging by directly calculating plant water uptake for young wheat plants in two soil types. The root system was imaged using X\uffe2\uff80\uff90ray CT at 2, 4, 6, 8 and 12\uffc2\uffa0d after transplanting. The roots were segmented using semi\uffe2\uff80\uff90automated root tracking for speed and reproducibility. The segmented geometries were converted to a mesh suitable for the numerical solution of Richards' equation. Richards' equation was parameterized using existing pore scale studies of soil hydraulic properties in the rhizosphere of wheat plants. Image\uffe2\uff80\uff90based modelling allows the spatial distribution of water around the root to be visualized and the fluxes into the root to be calculated. By comparing the results obtained through image\uffe2\uff80\uff90based modelling to spatially averaged models, the impact of root architecture and geometry in water uptake was quantified. We observed that the spatially averaged models performed well in comparison to the image\uffe2\uff80\uff90based models with &lt;2% difference in uptake. However, the spatial averaging loses important information regarding the spatial distribution of water near the root system.</p", "keywords": ["0106 biological sciences", "0301 basic medicine", "2. Zero hunger", "0303 health sciences", "550", "Water", "15. Life on land", "01 natural sciences", "Models", " Biological", "Plant Roots", "6. Clean water", "Soil", "03 medical and health sciences", "Imaging", " Three-Dimensional", "Tomography", " X-Ray Computed", "Porosity"]}, "links": [{"href": "https://eprints.nottingham.ac.uk/42292/1/170405_WP2_Paper_update_final%20Mooney.pdf"}, {"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/pce.12983"}, {"href": "https://doi.org/10.1111/pce.12983"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%2C%20Cell%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/pce.12983", "name": "item", "description": "10.1111/pce.12983", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/pce.12983"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-07-05T00:00:00Z"}}, {"id": "10.1111/nph.17980", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:06Z", "type": "Journal Article", "created": "2022-01-19", "title": "Multimodal correlative imaging and modelling of phosphorus uptake from soil by hyphae of mycorrhizal fungi", "description": "Summary<p>   <p>Phosphorus (P) is essential for plant growth. Arbuscular mycorrhizal fungi (AMF) aid its uptake by acquiring P from sources distant from roots in return for carbon. Little is known about how AMF colonise soil pore\uffe2\uff80\uff90space, and models of AMF\uffe2\uff80\uff90enhanced P\uffe2\uff80\uff90uptake are poorly validated.</p>  <p>We used synchrotron X\uffe2\uff80\uff90ray computed tomography to visualize mycorrhizas in soil and synchrotron X\uffe2\uff80\uff90ray fluorescence/X\uffe2\uff80\uff90ray absorption near edge structure (XRF/XANES) elemental mapping for P, sulphur (S) and aluminium (Al) in combination with modelling.</p>  <p>We found that AMF inoculation had a suppressive effect on colonisation by other soil fungi and identified differences in structure and growth rate between hyphae of AMF and nonmycorrhizal fungi. Our results showed that AMF co\uffe2\uff80\uff90locate with areas of high P and low Al, and preferentially associate with organic\uffe2\uff80\uff90type P species over Al\uffe2\uff80\uff90rich inorganic P.</p>  <p>We discovered that AMF avoid Al\uffe2\uff80\uff90rich areas as a source of P. Sulphur\uffe2\uff80\uff90rich regions were found to be correlated with higher hyphal density and an increased organic\uffe2\uff80\uff90associated P\uffe2\uff80\uff90pool, whilst oxidized S\uffe2\uff80\uff90species were found close to AMF hyphae. Increased S oxidation close to AMF suggested the observed changes were microbiome\uffe2\uff80\uff90related. Our experimentally\uffe2\uff80\uff90validated model led to an estimate of P\uffe2\uff80\uff90uptake by AMF hyphae that is an order of magnitude lower than rates previously estimated \uffe2\uff80\uff93 a result with significant implications for the modelling of plant\uffe2\uff80\uff93soil\uffe2\uff80\uff93AMF interactions.</p>  </p", "keywords": ["580", "X-ray computed tomography", "570", "Research", "X-ray fluorescence", "Fungi", "Hyphae", "500", "Phosphorus", "mycorrhizas", "04 agricultural and veterinary sciences", "15. Life on land", "plant phosphorus uptake", "Plant Roots", "Soil", "rhizosphere modelling", "Mycorrhizae", "synchrotron", "0401 agriculture", " forestry", " and fisheries", "Soil Microbiology"]}, "links": [{"href": "https://eprints.soton.ac.uk/454110/1/Keyes_et_al_Myco_Paper_TR_04_01_2022_unmarked.pdf"}, {"href": "https://eprints.soton.ac.uk/454110/2/Figures_TR_22_12_2021.pdf"}, {"href": "https://eprints.soton.ac.uk/454110/3/SI_1_TR_22_12_2021_no_markup.pdf"}, {"href": "https://eprints.soton.ac.uk/454110/4/SI_2_TR_22_12_2021.pdf"}, {"href": "https://doi.org/10.1111/nph.17980"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.17980", "name": "item", "description": "10.1111/nph.17980", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.17980"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-15T00:00:00Z"}}, {"id": "10.1111/nph.15516", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:06Z", "type": "Journal Article", "created": "2018-10-06", "title": "Imaging microstructure of the barley rhizosphere: particle packing and root hair influences", "description": "Summary<p>   <p>Soil adjacent to roots has distinct structural and physical properties from bulk soil, affecting water and solute acquisition by plants. Detailed knowledge on how root activity and traits such as root hairs affect the three\uffe2\uff80\uff90dimensional pore structure at a fine scale is scarce and often contradictory.</p>  <p>Roots of hairless barley (Hordeum vulgare L. cv Optic) mutant (NRH) and its wildtype (WT) parent were grown in tubes of sieved (&lt;250\uffc2\uffa0\uffce\uffbcm) sandy loam soil under two different water regimes. The tubes were scanned by synchrotron\uffe2\uff80\uff90based X\uffe2\uff80\uff90ray computed tomography to visualise pore structure at the soil\uffe2\uff80\uff93root interface. Pore volume fraction and pore size distribution were analysed vs distance within 1\uffc2\uffa0mm of the root surface.</p>  <p>Less dense packing of particles at the root surface was hypothesised to cause the observed increased pore volume fraction immediately next to the epidermis. The pore size distribution was narrower due to a decreased fraction of larger pores. There were no statistically significant differences in pore structure between genotypes or moisture conditions.</p>  <p>A model is proposed that describes the variation in porosity near roots taking into account soil compaction and the surface effect at the root surface.</p>  </p>", "keywords": ["name=Physiology", "STABILIZATION", "Physiology", "EP/M020355/1", "Supplementary Data", "QH301 Biology", "Plant Science", "Supplementary data available", "Plant Roots", "630", "noninvasive imaging", "Soil", "646809DIMR", "STRENGTH", "BB/J00868/1", "Hordeum vulgare", "2. Zero hunger", "04 agricultural and veterinary sciences", "Rhizosphere", "COMPRESSION", "soil structure", "Porosity", "European Research Council", "/dk/atira/pure/subjectarea/asjc/1300/1314", "/dk/atira/pure/subjectarea/asjc/1100/1110", "root hairs", "COMPACTION", "QH301", "Imaging", " Three-Dimensional", "synchrotron", "particle packing", "SOIL-STRUCTURE", "BB/L025620/1", "WATER-STRESS", "NE/L00237/1", "580", "ELONGATION", "Civil_env_eng", "Natural Environment Research Council (NERC)", "POROSITY", "Water", "Hordeum", "15. Life on land", "Engineering and Physical Sciences Research Council (EPSRC)", "Mutation", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "PENETRATION", "name=Plant Science", "rhizosphere", "Tomography", " X-Ray Computed", "MAIZE", "BB/P004180/1", "Synchrotrons", "BB/L025825/1"]}, "links": [{"href": "https://repository.uwl.ac.uk/id/eprint/5489/1/AS6808504337817661539338801587_content_1.pdf"}, {"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.15516"}, {"href": "https://doi.org/10.1111/nph.15516"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.15516", "name": "item", "description": "10.1111/nph.15516", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.15516"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-11-20T00:00:00Z"}}, {"id": "10.1111/nph.16242", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:06Z", "type": "Journal Article", "created": "2019-10-08", "title": "Root\u2010induced soil deformation influences Fe, S and P: rhizosphere chemistry investigated using synchrotron XRF and XANES", "description": "Summary<p>   <p>Rhizosphere soil has distinct physical and chemical properties from bulk soil. However, besides root\uffe2\uff80\uff90induced physical changes, chemical changes have not been extensively measured in situ on the pore scale.</p>  <p>In this study, we couple structural information, previously obtained using synchrotron X\uffe2\uff80\uff90ray computed tomography (XCT), with synchrotron X\uffe2\uff80\uff90ray fluorescence microscopy (XRF) and X\uffe2\uff80\uff90ray absorption near\uffe2\uff80\uff90edge structure (XANES) to unravel chemical changes induced by plant roots.</p>  <p>Our results suggest that iron (Fe) and sulfur (S) increase notably in the direct vicinity of the root via solubilization and microbial activity. XANES further shows that Fe is slightly reduced, S is increasingly transformed into sulfate (SO42\uffe2\uff88\uff92) and phosphorus (P) is increasingly adsorbed to humic substances in this enrichment zone. In addition, the ferrihydrite fraction decreases drastically, suggesting the preferential dissolution and the formation of more stable Fe oxides. Additionally, the increased transformation of organic S to sulfate indicates that the microbial activity in this zone is increased. These changes in soil chemistry correspond to the soil compaction zone as previously measured via XCT.</p>  <p>The fact that these changes are colocated near the root and the compaction zone suggests that decreased permeability as a result of soil structural changes acts as a barrier creating a zone with increased rhizosphere chemical interactions via surface\uffe2\uff80\uff90mediated processes, microbial activity and acidification.</p>  </p", "keywords": ["2. Zero hunger", "550", "Iron", "Hordeum", "Phosphorus", "04 agricultural and veterinary sciences", "15. Life on land", "Plant Roots", "Soil", "Microscopy", " Fluorescence", "Rhizosphere", "0401 agriculture", " forestry", " and fisheries", "Tomography", " X-Ray Computed", "Sulfur", "Synchrotrons"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.16242"}, {"href": "https://doi.org/10.1111/nph.16242"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.16242", "name": "item", "description": "10.1111/nph.16242", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.16242"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-11-12T00:00:00Z"}}, {"id": "10.1111/ppa.13674", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:07Z", "type": "Journal Article", "created": "2022-11-11", "title": "The impact of xylem geometry on olive cultivar resistance to Xylella fastidiosa: An image\u2010based study", "description": "Abstract<p>Xylella fastidiosa is a xylem\uffe2\uff80\uff90limited plant pathogen infecting many crops globally and is the cause of the recent olive disease epidemic in Italy. One strategy proposed to mitigate losses is to replant susceptible crops with resistant varieties. Several genetic, biochemical and biophysical traits are associated to X. fastidiosa disease resistance. However, mechanisms underpinning resistance are poorly understood. We hypothesize that the susceptibility of olive cultivars to infection will correlate to xylem vessel diameters, with narrower vessels being resistant to air embolisms and having slower flow rates limiting pathogen spread. To test this, we scanned stems from four olive cultivars of varying susceptibility to X. fastidiosa using X\uffe2\uff80\uff90ray computed tomography. Scans were processed by a bespoke methodology that segmented vessels, facilitating diameter measurements. Though significant differences were not found comparing stem\uffe2\uff80\uff90average vessel section diameters among cultivars, they were found when comparing diameter distributions. Moreover, the measurements indicated that although vessel diameter distributions may play a role regarding the resistance of Leccino, it is unlikely they do for FS17. Considering Young\uffe2\uff80\uff93Laplace and Hagen\uffe2\uff80\uff93Poiseuille equations, we inferred differences in embolism susceptibility and hydraulic conductivity of the vasculature. Our results suggest susceptible cultivars, having a greater proportion of larger vessels, are more vulnerable to air embolisms. In addition, results suggest that under certain pressure conditions, functional vasculature in susceptible cultivars could be subject to greater stresses than in resistant cultivars. These results support investigation into xylem morphological screening to help inform olive replanting. Furthermore, our framework could test the relevance of xylem geometry to disease resistance in other crops.</p", "keywords": ["2. Zero hunger", "X-ray computed tomography", "0106 biological sciences", "15. Life on land", "Xylella", "01 natural sciences", "630", "olive dieback"]}, "links": [{"href": "https://iris.cnr.it/bitstream/20.500.14243/420312/1/prod_473732-doc_193088.pdf"}, {"href": "https://eprints.soton.ac.uk/471748/9/Plant_Pathology_2022_Walker_The_Impact_of_Xylem_Geometry_on_Olive_Cultivar_Resistance_to_Xylella_fastidiosa_An.pdf"}, {"href": "https://doi.org/10.1111/ppa.13674"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Pathology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/ppa.13674", "name": "item", "description": "10.1111/ppa.13674", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/ppa.13674"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-19T00:00:00Z"}}, {"id": "10.1111/ppa.13835", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:07Z", "type": "Journal Article", "created": "2023-11-28", "title": "A high\u2010throughput analysis of high\u2010resolution X\u2010ray CT images of stems of olive and citrus plants resistant and susceptible to Xylella fastidiosa", "description": "Abstract<p>The bacterial plant pathogen Xylella fastidiosa causes disease in several globally important crops. However, some cultivars harbour reduced bacterial loads and express few symptoms. Evidence considering plant species in isolation suggests xylem structure influences cultivar susceptibility to X. fastidiosa. We test this theory more broadly by analysing high\uffe2\uff80\uff90resolution synchrotron X\uffe2\uff80\uff90ray computed tomography of healthy and infected plant vasculature from two taxonomic groups containing susceptible and resistant varieties: two citrus cultivars (sweet orange cv. Pera, tangor cv. Murcott) and two olive cultivars (Koroneiki, Leccino). Results found the susceptible plants had more vessels than resistant ones, which could promote within\uffe2\uff80\uff90host pathogen spread. However, features associated with resistance were not shared by citrus and olive. While xylem vessels in resistant citrus stems had comparable diameters to those in susceptible plants, resistant olives had narrower vessels that could limit biofilm spread. And while differences among olive cultivars were not detected, results suggest greater vascular connectivity in resistant compared to susceptible citrus plants. We hypothesize that this provides alternate flow paths for sustaining hydraulic functionality under infection. In summary, this work elucidates different physiological resistance mechanisms between two taxonomic groups, while supporting the existence of an intertaxonomical metric that could speed up the identification of candidate\uffe2\uff80\uff90resistant plants.</p", "keywords": ["2. Zero hunger", "resistance", "X-ray computed tomography", "Xylella fastidiosa", "Olive quick decline syndrome", "citrus variegated chlorosis", "olive quick decline syndrome", "Resistance", "Citrus variegated chlorosis", "15. Life on land", "xylem", "630"]}, "links": [{"href": "https://doi.org/10.1111/ppa.13835"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Pathology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/ppa.13835", "name": "item", "description": "10.1111/ppa.13835", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/ppa.13835"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-11-27T00:00:00Z"}}, {"id": "10.1117/12.2624440", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:09Z", "type": "Journal Article", "created": "2022-05-19", "title": "Perfluorinated polymer fibre Bragg grating sensors for distributed low-dose clinical X-ray measurements", "description": "Optical fibres have played an important role in the advancement of real-time dosimetry in clinical applications in recent years. Significant work has been done to increase precision and accuracy in detecting radiation doses during treatment, to avoid the negative effect that can ensue from irradiating healthy tissue around the tumour. The drive to develop distributed measurement in optical fibres has been limited to the slow scanning speed systems from optical time domain reflectometry (OTDR), however for radiotherapy dosimetry, with often short radiation pulse durations, fibre Bragg grating (FBG) interrogation is a better alternative because of the fast-scanning speed. The work presented here includes the preliminary results in the characterisation of CYTOP FBGs on exposure to X-ray radiation emitted from a clinical linear accelerator (linac) machine. A blue shifted linear response of the Bragg wavelength with sensitivity of 6.655 pm/Gy, 6.519 pm/Gy and 7.153 pm/Gy at the three main peaks (1522 nm, 1542 and 1561 nm), was recorded for a 9 Gy of radiation at a dose rate of 1.758 Gy/min with an amplitude fluctuation within the duration of radiation. The response demonstrates the potential for its use in low dose radiation dosimetry, providing for quasi-distributed sensing in radiotherapy.", "keywords": ["0211 other engineering and technologies", "fibre optics dosimetry", "02 engineering and technology", "Electrical Engineering - Electronic Engineering - Information Engineering", "X-ray", "Fibre Bragg grating", "Optical fibres", "Radiation Monitoring", "Dosimetry", "fibre Bragg grating sensors", "0202 electrical engineering", " electronic engineering", " information engineering", "fibre optics sensors", "Engineering and Technology", "CYTOP", "low-dose clinical X-ray measurements"]}, "links": [{"href": "https://doi.org/10.1117/12.2624440"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Micro-Structured%20and%20Specialty%20Optical%20Fibres%20VII", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1117/12.2624440", "name": "item", "description": "10.1117/12.2624440", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1117/12.2624440"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-19T00:00:00Z"}}, {"id": "10.1117/12.2624516", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:09Z", "type": "Journal Article", "created": "2022-05-19", "title": "Plastic scintillator-based fibre dosimeters for measurement of X-ray pulses in a clinical setting", "description": "This work presents the development of plastic scintillator (BCF-10) based optical fibre sensors for medical radiotherapy dosimetry. Two different designs of BCF10 joined to PMMA (Polymethyl methacrylate) fibre were considered, based on simple Plug and Play designs for the rapid and effective assembly of radiation sensors. The first design was a simple butt-coupling arrangement sheathed in tubing, with an outer diameter of <2 mm. The second design explored the coupling joint of a cylindrical protrusion and hollow part of BCF10-PMMA that were achieved using femtosecond laser machining; the purpose of which was to maintain the original 1-mm fibre diameter for the sensor probe. The two fibres were pressed together and sealed with UV curing, hence the reference to a Plug and Play architecture. Both sensors exhibit higher output counts at the higher dose rate (due to the higher number of radiation pulses), although a discernible signal is observed at 50 MU/min for 6 MV, 15 MV energies and both sensors. When comparing both sensors with the different joint coupling designs, the flat surface connection of BCF-10 to PMMA demonstrates slightly higher photon counts compared with the micro-machined sensor (Plug n Play). However, the difference is small and the Plug n Play sensor benefits from the smaller sensor diameter (1 mm diameter), which is suitable for inserting into a small applicator or in-vivo monitoring. In the second section, micro-pulses of X-Ray radiation from Siemens Linear Accelerator (linac) were obtained and compared for two different energies and dose rates. Both of the sensors demonstrate the feasibility to be used for characterisation of X-ray pulses from a clinical linac.", "keywords": ["Plastic scintillator", "03 medical and health sciences", "0302 clinical medicine", "fibre dosimeters", "Engineering and Technology", "Electrical Engineering - Electronic Engineering - Information Engineering", "X-ray pulses"]}, "links": [{"href": "https://doi.org/10.1117/12.2624516"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Micro-Structured%20and%20Specialty%20Optical%20Fibres%20VII", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1117/12.2624516", "name": "item", "description": "10.1117/12.2624516", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1117/12.2624516"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-05-19T00:00:00Z"}}, {"id": "10.3389/fpls.2021.698640", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:20:50Z", "type": "Journal Article", "created": "2021-08-06", "title": "High-Resolution X-Ray Computed Tomography: A New Workflow for the Analysis of Xylogenesis and Intra-Seasonal Wood Biomass Production", "description": "<p>Understanding tree growth and carbon sequestration are of crucial interest to forecast the feedback of forests to climate change. To have a global understanding of the wood formation, it is necessary to develop new methodologies for xylogenesis measurements, valid across diverse wood structures and applicable to both angiosperms and gymnosperms. In this study, the authors present a new workflow to study xylogenesis using high-resolution X-ray computed tomography (HRXCT), which is generic and offers high potential for automatization. The HXRCT-based approach was benchmarked with the current classical approach (microtomy) on three tree species with contrasted wood anatomy (Pinus nigra, Fagus sylvatica, and Quercus robur). HRXCT proved to estimate the relevant xylogenesis parameters (timing, duration, and growth rates) across species with high accuracy. HRXCT showed to be an efficient avenue to investigate tree xylogenesis for a wide range of wood anatomies, structures, and species. HRXCT also showed its potential to provide quantification of intra-annual dynamics of biomass production through high-resolution 3D mapping of wood biomass within the forming growth ring.</p>", "keywords": ["0106 biological sciences", "[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics", "XYLEM", "tree growth", "secondary growth phenology", "Plant Science", "01 natural sciences", "7. Clean energy", "[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/Botanics", "SB1-1110", "Tree growth", "Secondary growth phenology", "microtomy", "PHENOLOGY", "[SDV.BID.SPT] Life Sciences [q-bio]/Biodiversity/Systematics", " Phylogenetics and taxonomy", "FAGUS-SYLVATICA", "[SDV.EE.ECO] Life Sciences [q-bio]/Ecology", " environment/Ecosystems", "Biology", "TREE", "Xylogenesis", "580", "xylogenesis", "high-resolution X-ray computed tomography", "Biology and Life Sciences", "Plant culture", "Phylogenetics and taxonomy", "Microtomy", "[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanics", "15. Life on land", "BEECH", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "13. Climate action", "[SDV.EE.ECO]Life Sciences [q-bio]/Ecology", "PLANT STRUCTURE", "[SDE.BE]Environmental Sciences/Biodiversity and Ecology", "environment/Ecosystems", "Engineering sciences. Technology"]}, "links": [{"href": "https://doi.org/10.3389/fpls.2021.698640"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fpls.2021.698640", "name": "item", "description": "10.3389/fpls.2021.698640", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fpls.2021.698640"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-08-06T00:00:00Z"}}, {"id": "10.15151/esrf-es-1999197126", "type": "Feature", "geometry": null, "properties": {"license": "unspecified", "updated": "2026-07-25T16:19:37Z", "type": "Dataset", "title": "Multitechnique in situ assessment of local and long-range stability of Metal-Organic Frameworks in Alkaline Environments", "description": "The proposal aims to explore in situ the changes at the atomic level and in the structure during the immersion in an electrolyte solution of  MOFs designed for the Oxygen Evolution Reaction. The study will enable to monitor the dependence of the degradation behavior of three  different MOFs with time and strength of the basic solution. Pairing time-resolved XANES-EXAFS with XRD and PDF will provide an efficient  way to quantify the overall kinetics of the degradation at different levels: atomic and electronic and structural.", "keywords": ["ID24-DCM", "x-ray probe", "MA-6372", "Applied Material Science"], "contacts": [{"organization": "Borfecchia, Elisa, Campitelli, Patrizio, Celikutku, Cem, De Gasperis, Lorenzo, Marsicano, Anna, Signorile, Matteo,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.15151/esrf-es-1999197126"}, {"rel": "self", "type": "application/geo+json", "title": "10.15151/esrf-es-1999197126", "name": "item", "description": "10.15151/esrf-es-1999197126", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.15151/esrf-es-1999197126"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2028-01-01T00:00:00Z"}}, {"id": "10.15376/biores.13.3.5976-6002", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:40Z", "type": "Journal Article", "created": "2022-09-21", "title": "Effects of Biomass Type, Carbonization Process, and Activation Method on the Properties of Bio-Based Activated Carbons", "description": "<p>Activated carbons (AC) serve as adsorbents in various applications requiring specific functionalities. In this study, the effects of biomass type, pre-carbonization process, and activation method on the properties of ACs were investigated. Chemical (KOH and H3PO4) and physical (CO2) activations were performed on slow pyrolyzed and hydrothermally carbonized (HTC) biochars produced from two feedstocks, willow and Scots pine bark (SPB). In addition, the adsorption capacities of the ACs were tested with two dyes and zinc metal. Distinct differences were found between the biochars and ACs regarding pore size distributions, surface area (238 \uffe2\uff80\uff93 3505 m2 g-1), and surface chemistry. KOH activation produced highly microporous ACs from all biochars, whereas with H3PO4 and CO2 there was also increase in the meso- and macroporosity with the HTC biochars. Adsorption capacity for dyes was dependent on the surface area, while for zinc it depended on AC\uffe2\uff80\uff99s pH. The results provide interesting insights into tailoring ACs for specific applications.</p>", "keywords": ["bark", "willow", "biohiili", "330", "Willow", "Activated carbon", "Activated carbon;", "pine bark", "pajut", "Pinus sylvestris", "tomography", "bio-based activated carbon", "620", "Biochar", "tomografia", "Pine bark", "SDG 13 - Climate Action", "Bio-based activated carbon", "activated carbon", "biochar", "ta219", "SDG 7 - Affordable and Clean Energy", "X-ray tomography"]}, "links": [{"href": "https://bioresources.cnr.ncsu.edu/wp-content/uploads/2018/06/BioRes_13_3_5976_Siipola_Effects_Biomass_Type_Carbonizat_Process_Activat_Method_Activ_C_13985.pdf"}, {"href": "https://doi.org/10.15376/biores.13.3.5976-6002"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/BioResources", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.15376/biores.13.3.5976-6002", "name": "item", "description": "10.15376/biores.13.3.5976-6002", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.15376/biores.13.3.5976-6002"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-06-15T00:00:00Z"}}, {"id": "10.15488/17031", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:19:47Z", "type": "Journal Article", "created": "2016-04-08", "title": "Challenges in imaging and predictive modeling of rhizosphere processes", "description": "Background: Plant-soil interaction is central to human food production and ecosystem function. Thus, it is essential to not only understand, but also to develop predictive mathematical models which can be used to assess how climate and soil management practices will affect these interactions. Scope: In this paper we review the current developments in structural and chemical imaging of rhizosphere processes within the context of multiscale mathematical image based modeling. We outline areas that need more research and areas which would benefit from more detailed understanding. Conclusions: We conclude that the combination of structural and chemical imaging with modeling is an incredibly powerful tool which is fundamental for understanding how plant roots interact with soil. We emphasize the need for more researchers to be attracted to this area that is so fertile for future discoveries. Finally, model building must go hand in hand with experiments. In particular, there is a real need to integrate rhizosphere structural and chemical imaging with modeling for better understanding of the rhizosphere processes leading to models which explicitly account for pore scale processes.", "keywords": ["2. Zero hunger", "X-ray CT", "Dewey Decimal Classification::500 | Naturwissenschaften::570 | Biowissenschaften", " Biologie", "Soil Science", "Plant Science", "Chemical mapping", "04 agricultural and veterinary sciences", "15. Life on land", "Dewey Decimal Classification::500 | Naturwissenschaften::580 | Pflanzen (Botanik)", "13. Climate action", "Rhizosphere", "0401 agriculture", " forestry", " and fisheries", "Mathematical modeling", "Correlative imaging"]}, "links": [{"href": "https://eprints.soton.ac.uk/390303/1/Roose%2520et%2520al%25202016%2520Plant%2520Soil%2520Marschner%2520Review%2520Accepted.pdf"}, {"href": "https://doi.org/10.15488/17031"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20and%20Soil", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.15488/17031", "name": "item", "description": "10.15488/17031", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.15488/17031"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-04-08T00:00:00Z"}}, {"id": "10.2136/sssaj2015.03.0097", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:20:28Z", "type": "Journal Article", "created": "2015-07-10", "title": "From Real Soils to 3D-Printed Soils: Reproduction of Complex Pore Network at the Real Size in a Silty-Loam Soil", "description": "Pore complexity and micro-heterogeneity are pivotal in characterizing biogeochemical processes in soils. Recent advances in X-ray computed microtomography (microCT) allow the 3D soil morphology characterization of undisturbed samples, although its geometrical reproduction at very small spatial scales is still challenging. Here, by combining X-ray microCT with 3D multijet printing technology, we aimed to evaluate the reproducibility of 3D-printing soil structures at the original scale with a resolution of 80 \u03bcm and compare the hydraulic properties of original soil samples with those obtained from the soil-like prototypes. Results showed that soil-like prototypes were similar to the original samples in terms of total porosity and pore shape. By contrast the pore connectivity was reduced by incomplete wax removal from pore cavities after the 3D printing procedure. Encouraging results were also obtained in terms of hydraulic conductivity since measurements were successfully conducted on five out of six samples, showing positive correlation with experimental data. We are confident that future developments of 3D-printing technologies and of their combination with microCT will help to further the understanding of soil micro-heterogeneity and its effects on soil-water dynamics.", "keywords": ["2. Zero hunger", "[SDE.ES] Environmental Sciences/Environment and Society", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil study", "Soil structure", " 3D Print; X-ray microtomography", " water permeability"], "contacts": [{"organization": "DAL FERRO, NICOLA, MORARI, FRANCESCO,", "roles": ["creator"]}]}, "links": [{"href": "https://www.research.unipd.it/bitstream/11577/3188605/4/Dal%20Ferro_From%20real%20soils%20to%203D%20printed%20soils_2015.pdf"}, {"href": "http://onlinelibrary.wiley.com/wol1/doi/10.2136/sssaj2015.03.0097/fullpdf"}, {"href": "https://doi.org/10.2136/sssaj2015.03.0097"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Science%20Society%20of%20America%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2136/sssaj2015.03.0097", "name": "item", "description": "10.2136/sssaj2015.03.0097", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2136/sssaj2015.03.0097"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-07-01T00:00:00Z"}}, {"id": "10.25574/23540", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:20:41Z", "type": "Dataset", "created": "2022-09-20", "title": "Chandra X-ray Observatory ObsId 23540", "description": "Ground-Truth PWN Spectral Images for IXPE Polarization Maps", "keywords": ["X-ray Astronomy", "High Energy Astrophysics Data/X-ray Data"], "contacts": [{"organization": "CXC-DS", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.25574/23540"}, {"rel": "self", "type": "application/geo+json", "title": "10.25574/23540", "name": "item", "description": "10.25574/23540", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.25574/23540"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-01T00:00:00Z"}}, {"id": "10.25574/csc2.stk.acisfj1503564m420354_001", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:20:41Z", "type": "Dataset", "created": "2016-07-01", "title": "Chandra X-ray Observatory Stack acisfJ1503564m420354_001", "description": "CSC uses combined (i.e. overlapping) Chandra observations for detecting X-ray sources. This allows the catalog to include significantly fainter sources than CSC 1.1. The set of overlapping observations that have been combined in this way is known as a 'stack'.", "keywords": ["X-ray Astronomy", "High Energy Astrophysics Data/X-ray Data"], "contacts": [{"organization": "CXC-DS", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.25574/csc2.stk.acisfj1503564m420354_001"}, {"rel": "self", "type": "application/geo+json", "title": "10.25574/csc2.stk.acisfj1503564m420354_001", "name": "item", "description": "10.25574/csc2.stk.acisfj1503564m420354_001", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.25574/csc2.stk.acisfj1503564m420354_001"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-01T00:00:00Z"}}, {"id": "10.3389/feart.2021.703304", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:20:45Z", "type": "Journal Article", "created": "2021-09-04", "title": "Mineral Element Stocks in the Yedoma Domain: A Novel Method Applied to Ice-Rich Permafrost Regions", "description": "<p>With permafrost thaw, significant amounts of organic carbon (OC) previously stored in frozen deposits are unlocked and become potentially available for microbial mineralization. This is particularly the case in ice-rich regions such as the Yedoma domain. Excess ground ice degradation exposes deep sediments and their OC stocks, but also mineral elements, to biogeochemical processes. Interactions of mineral elements and OC play a crucial role for OC stabilization and the fate of OC upon thaw, and thus regulate carbon dioxide and methane emissions. In addition, some mineral elements are limiting nutrients for plant growth or microbial metabolic activity. A large ongoing effort is to quantify OC stocks and their lability in permafrost regions, but the influence of mineral elements on the fate of OC or on biogeochemical nutrient cycles has received less attention and there is an overall lack of mineral element content analyses for permafrost sediments. Here, we combine portable X-ray fluorescence (pXRF) with a bootstrapping technique to provide i) the first large-scale Yedoma domain Mineral Concentrations Assessment (YMCA) dataset, and ii) estimates of mineral element stocks in never thawed (since deposition) ice-rich Yedoma permafrost and previously thawed and partly refrozen Alas deposits. The pXRF method for mineral element quantification is non-destructive and offers a complement to the classical dissolution and measurement by optical emission spectrometry (ICP-OES) in solution. Using this method, mineral element concentrations (Si, Al, Fe, Ca, K, Ti, Mn, Zn, Sr and Zr) were assessed on 1,292 sediment samples from the Yedoma domain with lower analytical effort and lower costs relative to the ICP-OES method. The pXRF measured concentrations were calibrated using alkaline fusion and ICP-OES measurements on a subset of 144 samples (R2 from 0.725 to 0.996). The results highlight that i) the mineral element stock in sediments of the Yedoma domain (1,387,000\uffc2\uffa0km2) is higher for Si, followed by Al, Fe, K, Ca, Ti, Mn, Zr, Sr, and Zn, and that ii) the stock in Al and Fe (598 \uffc2\uffb1 213 and 288 \uffc2\uffb1 104\uffc2\uffa0Gt) is in the same order of magnitude as the OC stock (327\uffe2\uff80\uff93466\uffc2\uffa0Gt).</p>", "keywords": ["ddc:550", "late pleistocene- holocene", "thermokarst", "Science", "Q", "X-ray fluorescence", "01 natural sciences", "6. Clean water", "13. Climate action", "arctic", "alas", "Institut f\u00fcr Geowissenschaften", "thaw", "mineralogy", "late pleistocene \u2013 holocene", "bootstrapping technique", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.3389/feart.2021.703304"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Earth%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/feart.2021.703304", "name": "item", "description": "10.3389/feart.2021.703304", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/feart.2021.703304"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-03T00:00:00Z"}}, {"id": "10.3389/fenvs.2018.00032", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:20:46Z", "type": "Journal Article", "created": "2018-05-25", "title": "Correlative Visualization of Root Mucilage Degradation Using X-ray CT and MRI", "description": "Root exudates are a crucial component of the rhizosphere. Often, they take a form of a gel exuded by the plant roots and are thought to influence the soil aggregation, root penetration into soil, soil nutrient availability, immobilization of toxic cations, and microbial activity amongst other things. In addition, the capacity of exudates to store water makes the plants potentially less susceptive to drought. Major components of root exudates are high molecular weight organic compounds consisting of predominantly polysaccharides and proteins, which makes it challenging to visualize using current rhizosphere visualization techniques, such as X-ray computed tomography (CT). In this contribution, we use correlative X-ray CT (resolution ~20 \u03bcm) in combination with Magnetic Resonance Imaging (MRI, resolution ~120 \u03bcm) to set up groundwork to enable in situ visualization of mucilage in soil. This multimodal approach is necessary because mucilage density closely matches that of water. We use chia seeds as mucilage analog, because it has been found to have a similar consistency to root mucilage. Moreover, to understand mucilage development in time, a series of samples made by chia seeds placed in different porous media were prepared. Structurally and chemically, mucilage breaks down toward a water-like substance over a course of 2 weeks. Depending on its relative concentration, these changes were found to be less dominant when seeds were mixed in porous media. Having set up the groundwork for correlative imaging of chia seeds in water and an artificial soil (Nafion and sand/beads) this enables us to expand this imaging to deal with plant root exudates under natural conditions.", "keywords": ["2. Zero hunger", "570", "X-ray CT", "chia", "polysaccharides", "04 agricultural and veterinary sciences", "15. Life on land", "630", "6. Clean water", "root-exudate", "Environmental sciences", "1H-MRI", "0401 agriculture", " forestry", " and fisheries", "GE1-350", "mucilage"]}, "links": [{"href": "https://eprints.soton.ac.uk/421014/1/NMRI_imaging_chia_review_final_2_TR_01_05_2018.pdf"}, {"href": "https://eprints.soton.ac.uk/421014/2/fenvs_06_00032.pdf"}, {"href": "https://doi.org/10.3389/fenvs.2018.00032"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Environmental%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fenvs.2018.00032", "name": "item", "description": "10.3389/fenvs.2018.00032", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fenvs.2018.00032"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-05-25T00:00:00Z"}}, {"id": "10.3929/ethz-b-000663192", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:21:20Z", "type": "Journal Article", "title": "Vivianite formation and transformation processes in intertidal sediments and the influence of isomorphic substitution", "description": "unspecifiedPhosphor (P) ist ein wesentlicher N\u00e4hrstoff f\u00fcr die Prim\u00e4rproduktion in aqautischen \u00d6kosystemen, aber \u00fcberm\u00e4\u00dfiger P Eintrag kann zur Eutrophierung dieser \u00d6kosysteme f\u00fchren. Wie P in Sedimenten gebunden ist, wirkt sich auf dessen Bioverf\u00fcgbarkeit aus. Unter reduzierenden, sulfid-freien Bedingungen kann das eisenhaltige Phosphatmineral Vivianit eine wesentliche Rolle bei der P-Bindung in K\u00fcstensedimenten spielen und somit die Wasserqualit\u00e4t positiv beeinflussen. Trotz der Bedeutung von Vivianit f\u00fcr die Regulierung der P-Verf\u00fcgbarkeit in K\u00fcstensedimenten sind die in-situ Bildung, Zusammensetzung und Stabilit\u00e4t von Vivianit nur unzureichend untersucht. In dieser Doktorarbeit wurden Feldexperimente mit einer Laborstudie kombiniert, um die Bildungs- und Umwandlungsprozesse von Vivianit in gezeitenbeeinflussten Sedimenten und den Einfluss der isomorphen Substitution auf diese Prozesse aufzudecken. Diese Erkenntnisse bieten wertvolle Einblicke in die Prozesse des P-Kreislaufs in K\u00fcstensedimenten und sind bedeutend f\u00fcr die Entwicklung industrieller Anwendungen, die darauf abzielen, den anthropogenen P-Kreislauf zu schlie\u00dfen.   Im ersten Teil der Arbeit wurde eine Methode entwickelt, bei der isotopisch 57Fe-markiertes Ferrihydrit mit dem Sediment vermischt wurde, um die Vivianitbildung in-situ in gezeitenbeeinflussten Sedimenten zu verfolgen. Mit dieser Methode konnte gezeigt werden, dass sich Vivianit innerhalb von sieben Wochen in gezeitenbeeinflussten Sedimenten mit g\u00fcnstigen geochemischen Bedingungen bilden kann. Die Adsorption von Phosphat an Ferrihydrit war ein wesentlicher Vorl\u00e4ufer f\u00fcr die Bildung von Vivianit. Die reduktive Aufl\u00f6sung des Ferrihydrits bildete wahrscheinlich lokale Bedingen, welche n\u00f6tig waren, um die Vivianitbildung auszul\u00f6sen. W\u00e4hrend das gebildete Vivianit nur ein kleiner Teil des Eisen (Fe)-Pools war (bis zu 15%), machte es bis zu 72% des P-Pools aus basierend auf st\u00f6chiometrischen Berechnungen. Diese Ergebnisse zeigen, dass Vivianit eine entscheidende Rolle bei der Regulierung der P-Retention in K\u00fcstensedimenten spielen kann.   In der Umwelt enth\u00e4lt Vivianit h\u00e4ufig andere zweiwertige Kationen, wie Mangan (Mn) und Magnesium (Mg), die in der Kristallstruktur Fe ersetzen. Im zweiten Experiment wurde untersucht, ob Mn oder Mg bei unterschiedlichen Salzgehalten bevorzugt eingebaut wird und wie die isomorphe Substitution die Kristallstruktur und Morphologie ver\u00e4ndert. Die Synthese von neunzehn Vivianiten mit unterschiedlichen Mn- und/oder Mg-Konzentrationen bei verschiedenen Salzgehalten ergab, dass bei niedriger Ionenst\u00e4rke sowohl Mn als auch Mg Fe in der Kristallstruktur gleichwertig ersetzen k\u00f6nnen, wobei Mn bei h\u00f6herer Ionenst\u00e4rke bevorzugt wurde. Vivianit weist zwei unterschiedliche Fe-Atompositionen auf. Die Substitution von Fe durch Mn und/oder Mg fand vorzugsweise an der Atomposition statt, welche Elektronentransfer ausf\u00fchren kann, wodurch Vivianit gegen Oxidation stabilisiert wird. Somit kann sich die isomorphe Substitution wahrscheinlich direkt auf das Oxidationsverhalten von Vivianit auswirken. Au\u00dferdem f\u00fchrte die isomorphe Substitution zu kleineren, raueren Kristallen mit geringerer Kristallinit\u00e4t. Diese beobachteten Ver\u00e4nderungen k\u00f6nnten sich auf die Reaktivit\u00e4t von Vivianit in der Umwelt auswirken, weshalb die isomorphe Substitution bei der Untersuchung der Reaktivit\u00e4t von Vivianit ber\u00fccksichtigt werden sollte.   Umweltver\u00e4nderungen, einschlie\u00dflich des Anstiegs des Meeresspiegels, k\u00f6nnten die Bildung von Sulfid in derzeit nicht sulfidischen Sedimenten, die Vivianit enthalten, verst\u00e4rken und zu thermodynamisch instabilen Bedingungen f\u00fcr Vivianit f\u00fchren. Das letzte Experiment untersuchte die in-situ Stabilit\u00e4t von unsubstituiertem und Mn-Mg-substituiertem Vivianit, gemischt mit Meeressand und mit oder ohne die Zugabe von Kalziumkarbonat. Die Mischungen wurden 56 Tage lang in zwei Gezeitenzonen inkubiert, von denen ein Standort eine niedrige und der andere eine hohe Sulfidkonzentration aufwies. Die Inkubation von unsubstituiertem und Mn-Mg-substituiertem Vivianit bei unterschiedlichen Sulfidkonzentrationen ergab eine teilweise Aufl\u00f6sung von Vivianit, die durch die isomorphe Substitution deutlich verst\u00e4rkt wurde. Der gr\u00f6\u00dfte Teil der verbleibenden Mineralphase wurde weiterhin als Vivianit charakterisiert, was darauf hindeutet, dass ein Teil des Vivianits \u00fcber die Versuchsdauer erhalten blieb. Bei niedrigen Sulfidkonzentrationen war Gr\u00fcner Rost das Hauptumwandlungsprodukt, das wahrscheinlich einen Teil des freigesetzten Phosphats adsorbierte. Bei hohem Sulfidgehalt dominierte die Bildung von Fe-Sulfidmineralen, welche aufgrund der geringen Sorptionskapazit\u00e4t f\u00fcr Phosphat zu einem erh\u00f6hten P-Verlust f\u00fchrte. Ein erh\u00f6htes Sorptionspotenzial f\u00fcr Phosphat durch die Zugabe von Kalziumkarbonat k\u00f6nnte den Phosphatverlust geringf\u00fcgig verringern. Diese Ergebnisse zeigen, dass vivianithaltige Sedimente als Quelle f\u00fcr bioverf\u00fcgbares Phosphat dienen k\u00f6nnen, wenn sich die geochemischen Bedingungen \u00e4ndern.   Diese Arbeit liefert neue experimentelle Ans\u00e4tze zur Untersuchung und Quantifizierung von Umwandlungs- und Bildungsprozessen von Vivianit. Die Ergebnisse zeigen eine schnelle in-situ Bildungskinetik, w\u00e4hrend die Aufl\u00f6sung von Vivianit unter den untersuchten Bedingungen langsam verl\u00e4uft. Die schnelle in-situ Bildungskinetik deutet darauf hin, dass die Vivianitbildung die P-Retention in Umgebungen mit sowohl schwankenden als auch stabilen geochemischen Bedingungen regulieren kann. Die Ver\u00e4nderungen der Kristallstruktur und -morphologie durch isomorphe Substitution erh\u00f6hten das Ausma\u00df der Aufl\u00f6sung und Umwandlung des Vivianits. Aufgrund der langsamen in-situ Aufl\u00f6sung k\u00f6nnte Vivianit bei kurzfristigen Umweltst\u00f6rungen eine stabile P-Retentionsphase darstellen. Langfristig destabilisierende Bedingungen k\u00f6nnten jedoch zu einer vollst\u00e4ndigen Aufl\u00f6sung f\u00fchren und die P-Retentionskapazit\u00e4t des Sediments schw\u00e4chen. Die Ergebnisse unterstreichen die Bedeutung von Vivianit als P-Retentionsphase in salzarmen K\u00fcstensedimenten, k\u00f6nnten aber auch f\u00fcr das Verst\u00e4ndnis von Bildungs- und Umwandlungsprozessen von Vivianit in anderen Umweltsystemen, wie limnischen Sedimenten und B\u00f6den in Feuchtgebieten, von Bedeutung sein. Dar\u00fcber hinaus haben diese Ergebnisse Auswirkungen auf andere Forschungsbereiche, wie die Gew\u00e4ssersanierung und die industrielle P-R\u00fcckgewinnung.", "keywords": ["iron biogeochemistry", "info:eu-repo/classification/ddc/550", "Phosphorus cycling", "Coastal biogeochemistry", "X-ray absorption spectroscopy", "Laboratory experiments", "VIVIANITE (MINERALOGY)", "Field experiments", "6. Clean water", "M\u00f6ssbauer Spectroscopy", "Earth sciences", "X-Ray Diffraction", "13. Climate action", "IRON PHOSPHATES (INORGANIC CHEMISTRY)", "14. Life underwater", "iron minerals", "mineral transformation", "Redox geochemistry"], "contacts": [{"organization": "Kubeneck, Luisa Jo\u00eblle", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.3929/ethz-b-000663192"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Thesis/Dissertation", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3929/ethz-b-000663192", "name": "item", "description": "10.3929/ethz-b-000663192", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3929/ethz-b-000663192"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-01T00:00:00Z"}}, {"id": "10.3390/coatings9100687", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:20:57Z", "type": "Journal Article", "created": "2019-10-23", "title": "Scale Formation and Degradation of Diffusion Coatings Deposited on 9% Cr Steel in Molten Solar Salt", "description": "<p>The employment of ferritic-martensitic steels e.g., P91, as structural materials in concentrated solar power (CSP) plants can significantly increase cost-efficiency. However, their application is strongly restricted by their lower corrosion resistance in molten nitrates, compared to austenitic steels or Ni-based alloys. In this study, Cr-, Al-, and Cr/Al-diffusion coatings were deposited on P91 via pack cementation in order to improve its scaling behavior in molten solar salt (MSS). The corrosion behavior of coated specimens was investigated with respect to uncoated P91 in MSS at 600 \uffc2\uffb0C for up to 1000 h. The exposure in MSS resulted in a thick, highly porous, and multi-layered oxide scale on uncoated P91 consisting of hematite, magnetite, and sodium ferrite. On the other hand, the scale grown on the chromized P91 comprised of a thin Cr-rich inner layer, which shifted breakaway to prolonged exposure durations. The aluminized specimens both formed very thin, highly protective alumina scales with localized protrusions.</p>", "keywords": ["[CHIM.INOR] Chemical Sciences/Inorganic chemistry", "[CHIM.MATE] Chemical Sciences/Material chemistry", "Cr-diffusion coating", "[CHIM.MATE]Chemical Sciences/Material chemistry", "02 engineering and technology", "[CHIM.INOR]Chemical Sciences/Inorganic chemistry", "[SPI.MAT] Engineering Sciences [physics]/Materials", "7. Clean energy", "pack cementation", "[SPI.MAT]Engineering Sciences [physics]/Materials", "concentrated solar power", "X-ray diffraction", "molten nitrate corrosion", "13. Climate action", "concentrated solar power; grade 91 steel; Cr-diffusion coating; Al-diffusion coating; pack cementation; molten nitrate corrosion; X-ray diffraction; Raman spectroscopy; third element effect", "Raman spectroscopy", "third element effect", "0202 electrical engineering", " electronic engineering", " information engineering", "grade 91 steel", "Al-diffusion coating", "0210 nano-technology"]}, "links": [{"href": "http://www.mdpi.com/2079-6412/9/10/687/pdf"}, {"href": "https://www.mdpi.com/2079-6412/9/10/687/pdf"}, {"href": "https://doi.org/10.3390/coatings9100687"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Coatings", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/coatings9100687", "name": "item", "description": "10.3390/coatings9100687", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/coatings9100687"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-10-22T00:00:00Z"}}, {"id": "10.3390/f9010004", "type": "Feature", "geometry": null, "properties": {"updated": "2026-07-25T16:20:59Z", "type": "Journal Article", "created": "2018-01-03", "title": "Drought-Induced Changes in Wood Density Are Not Prevented by Thinning in Scots Pine Stands", "description": "<p>Density is an important wood mechanical property and an indicator of xylem architecture and hydraulic conductivity. It can be influenced by forest management and climate. We studied the impact of thinning and climate variables on annual stem radial growth (ring width and ring density, and their earlywood and latewood components) in two contrasting Scots pine (Pinus sylvestris L.) stands in northern Spain (one continental, one Mediterranean). At each site, three thinning regimes (control or T0, removing 20% basal area or T20, and removing 30% or T30) were randomly applied to nine plots per site (three plots per treatment) in 1999. Thinning was repeated at the Mediterranean site in 2009 (increasing thinning intensity in T30 to 40%). Eight trees per plot were cored in spring 2014. Second thinning at the Mediterranean site and first thinning at the continental site generally caused significantly wider ring (RW), earlywood (EW) and latewood (LW) widths, although no differences between T20 and T30/40 were found, supporting in part the common observation that radial growth is enhanced following thinning as competition for water and nutrients is reduced. At the Mediterranean site, values of latewood density (LD) and maximum density (Dmax) relative to pre-thinning conditions were significantly lower in T0 than in T30. However, at the continental site, relative changes of ring density (RD) and LD were significantly higher in T0 than in T20 and T30. Climate significantly affected not only RW but also RD, with significant RD drops during or right after unusually warm-dry years (e.g., 2003, 2011), which were characterized by LD reductions between 5.4 and 8.0%. Such RD decreases were quickly followed by recovery of pre-drought density values. These results indicate trees temporarily reduce LD as a way to enhance hydraulic conductivity during dry summers. However, climate effects on wood density were site-dependent. We also detected that the thinning effect was not intense enough to prevent drought-induced changes in wood density by altering water availability, but it could help to reduce wood properties fluctuations and therefore maintain more homogeneous wood mechanic features.</p>", "keywords": ["0106 biological sciences", "Drought", "04 agricultural and veterinary sciences", "15. Life on land", "Tree-ring width", "01 natural sciences", "Dendroecology", "6. Clean water", "X-ray", "Scots pine", "0401 agriculture", " forestry", " and fisheries", "dendroecology; Scots pine; tree-ring width; wood density; X-ray densitometry; drought", "Wood density", "Densitometry"]}, "links": [{"href": "http://www.mdpi.com/1999-4907/9/1/4/pdf"}, {"href": "https://doi.org/10.3390/f9010004"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Forests", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/f9010004", "name": "item", "description": "10.3390/f9010004", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/f9010004"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-01-02T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=X-ray&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=X-ray&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=X-ray&", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=X-ray&offset=50", "hreflang": "en-US"}], "numberMatched": 94, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-07-26T08:13:41.178619Z"}