{"type": "FeatureCollection", "features": [{"id": "10.1016/j.biocontrol.2022.104890", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:15:22Z", "type": "Journal Article", "created": "2022-03-14", "title": "Exploring microbiomes for plant disease management", "description": "Microbiome science is revolutionizing many concepts of plant biology, ecology, and evolution. Understanding plant microbiomes is key to developing solutions that protect crop health without impacting the environment. In this perspective article, we highlight the importance of both the structure and functions of plant-associated microbial communities in protecting their host from pathogens. These new findings have a high potential to aid biocontrol programs and to replace traditional chemical products, guiding the transition towards a sustainable production.", "keywords": ["2. Zero hunger", "0301 basic medicine", "0303 health sciences", "03 medical and health sciences", "ddc:570", "15. Life on land", "Institut f\u00fcr Biochemie und Biologie"]}, "links": [{"href": "https://doi.org/10.1016/j.biocontrol.2022.104890"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biological%20Control", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.biocontrol.2022.104890", "name": "item", "description": "10.1016/j.biocontrol.2022.104890", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.biocontrol.2022.104890"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-06-01T00:00:00Z"}}, {"id": "10.1016/j.jaridenv.2010.05.034", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-09-21T16:15:54Z", "type": "Journal Article", "created": "2010-07-02", "title": "400 Years For Long-Distance Dispersal And Divergence In The Northern Atacama Desert \u2013 Insights From The Huaynaputina Pumice Slopes Of Moquegua, Peru", "description": "Abstract   The Huaynaputina eruption (1600 AD, Moquegua, S Peru) in the northern Atacama Desert denuded the Omate area of all vegetation and deposited deep pumice layers. Data on the flora, climate and soil characteristics of these slopes near Omate at 1600\u20132600\u00a0m a.s.l. are provided. Fifty-nine angiosperm species established themselves on the pumice slopes in the past ca. 400 years, with the bulk of the small and herbaceous species and several species new records for Peru. Three Omate sites were sampled in both a dry and a wet year and species numbers differed widely (14 versus 45 spp.). Among areas compared floristic composition is most similar to the Lomas de Tacna, and has less in common with geographically closer Lomas or Sierra formations. Nine species represent highly disjunct populations (200\u2013>700\u00a0km) from their nearest known living populations in central Peru, Chile, or Argentina/Bolivia and appear to have reached the area via long-distance dispersal. Abiotic conditions may have played an important role in limiting the establishment of species from the neighboring vegetation. Four taxa on the pumice slopes show clear morphological differences to populations elsewhere, two of them may represent neoendemics of the Omate pumice, indicating rapid morphological divergence.", "keywords": ["0106 biological sciences", "0301 basic medicine", "03 medical and health sciences", "15. Life on land", "01 natural sciences", "Institut f\u00fcr Biochemie und Biologie"]}, "links": [{"href": "https://doi.org/10.1016/j.jaridenv.2010.05.034"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Arid%20Environments", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jaridenv.2010.05.034", "name": "item", "description": "10.1016/j.jaridenv.2010.05.034", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jaridenv.2010.05.034"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-11-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2021.151925", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:16:07Z", "type": "Journal Article", "created": "2021-11-26", "title": "Cross-continental importance of CH4 emissions from dry inland-waters", "description": "Despite substantial advances in quantifying greenhouse gas (GHG) emissions from dry inland waters, existing estimates mainly consist of carbon dioxide (CO2) emissions. However, methane (CH4) may also be relevant due to its higher Global Warming Potential (GWP). We report CH4 emissions from dry inland water sediments to i) provide a cross-continental estimate of such emissions for different types of aquatic systems (i.e., lakes, ponds, reservoirs, and streams) and climate zones (i.e., tropical, continental, and temperate); and ii) determine the environmental factors that control these emissions. CH4 emissions from dry inland waters were consistently higher than emissions observed in adjacent uphill soils, across climate zones and in all aquatic systems except for streams. However, the CH4 contribution (normalized to CO2 equivalents; CO2-eq) to the total GHG emissions of dry inland waters was similar for all types of aquatic systems and varied from 10 to 21%. Although we discuss multiple controlling factors, dry inland water CH4 emissions were most strongly related to sediment organic matter content and moisture. Summing CO2 and CH4 emissions revealed a cross-continental average emission of 9.6\u00a0\u00b1\u00a017.4\u00a0g\u00a0CO2-eq\u00a0m-2\u00a0d-1 from dry inland waters. We argue that increasing droughts likely expand the worldwide surface area of atmosphere-exposed aquatic sediments, thereby increasing global dry inland water CH4 emissions. Hence, CH4 cannot be ignored if we want to fully understand the carbon (C) cycle of dry sediments.", "keywords": ["0106 biological sciences", "550", "Nitrous Oxide", "Aquatic Ecology", "Carbon Dioxide", "15. Life on land", "01 natural sciences", "6. Clean water", "[SDU] Sciences of the Universe [physics]", "Greenhouse Gases", "Lakes", "Rivers", "[SDU]Sciences of the Universe [physics]", "13. Climate action", "Ecological Microbiology", "11. Sustainability", "ddc:570", "Methane", "Institut f\u00fcr Biochemie und Biologie", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2021.151925"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2021.151925", "name": "item", "description": "10.1016/j.scitotenv.2021.151925", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2021.151925"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-03-01T00:00:00Z"}}, {"id": "10.1038/s41559-017-0325-1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:16:47Z", "type": "Journal Article", "created": "2017-09-29", "title": "Diversity-dependent temporal divergence of ecosystem functioning in experimental ecosystems", "description": "The effects of biodiversity on ecosystem functioning generally increase over time, but the underlying processes remain unclear. Using 26 long-term grassland and forest experimental ecosystems, we demonstrate that biodiversity-ecosystem functioning relationships strengthen mainly by greater increases in functioning in high-diversity communities in grasslands and forests. In grasslands, biodiversity effects also strengthen due to decreases in functioning in low-diversity communities. Contrasting trends across grasslands are associated with differences in soil characteristics.", "keywords": ["0106 biological sciences", "570", "grassland ecology", "Ecology and Evolutionary Biology", "Plant Sciences", "577", "soil biodiversity", "Biodiversity", "Forests", "15. Life on land", "Grassland", "01 natural sciences", "Article", "XXXXXX - Unknown", "Life Science", "ddc:570", "forest ecology", "Forest Sciences", "Institut f\u00fcr Biochemie und Biologie", "Ecosystem", "biodiversity", "ecosystem health"]}, "links": [{"href": "https://www.nature.com/articles/s41559-017-0325-1.pdf"}, {"href": "https://doi.org/10.1038/s41559-017-0325-1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Ecology%20%26amp%3B%20Evolution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41559-017-0325-1", "name": "item", "description": "10.1038/s41559-017-0325-1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41559-017-0325-1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-10-02T00:00:00Z"}}, {"id": "10.1111/1365-2664.13839", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:17:27Z", "type": "Journal Article", "created": "2021-01-19", "title": "Effects of microplastics and drought on soil ecosystem functions and multifunctionality", "description": "Abstract<p>   <p>Microplastics in soils have become an important threat for terrestrial systems as they may potentially alter the geochemical/biophysical soil environment and can interact with drought. As microplastics may affect soil water content, this could exacerbate the well\uffe2\uff80\uff90known negative effects of drought on ecosystem functionality. Thus, functions including litter decomposition, soil aggregation or those related with nutrient cycling can be altered. Despite this potential interaction, we know relatively little about how microplastics, under different soil water conditions, affect ecosystem functions and multifunctionality.</p>  <p>To address this gap, we performed an experiment using grassland plant communities growing in microcosms. Microplastic fibres (absent, present) and soil water conditions (well\uffe2\uff80\uff90watered, drought) were applied in a fully factorial design. At harvest, we measured soil ecosystem functions related to nutrient cycling (\uffce\uffb2\uffe2\uff80\uff90glucosaminidase, \uffce\uffb2\uffe2\uff80\uff90D\uffe2\uff80\uff90cellobiosidase, phosphatase, \uffce\uffb2\uffe2\uff80\uff90glucosidase enzymes), respiration, nutrient retention, pH, litter decomposition and soil aggregation (water stable aggregates). As terrestrial systems provide these functions simultaneously, we also assessed ecosystem multifunctionality, an index that encompasses the array of ecosystem functions measured here.</p>  <p>We found that the interaction between microplastic fibres and drought affected ecosystem functions and multifunctionality. Drought had negatively affected nutrient cycling by decreasing enzymatic activities by up to ~39%, while microplastics increased soil aggregation by ~18%, soil pH by ~4% and nutrient retention by up to ~70% by diminishing nutrient leaching. Microplastic fibres also impacted soil enzymes, respiration and ecosystem multifunctionality, but importantly, the direction of these effects depended on soil water status. That is, under well\uffe2\uff80\uff90watered conditions, these functions decreased with microplastic fibres by up to ~34% while under drought they had similar values irrespective of the microplastic presence, or tended to increase with microplastics. Litter decomposition had a contrary pattern increasing with microplastics by ~6% under well\uffe2\uff80\uff90watered conditions while decreasing to a similar percentage under drought.</p>  <p>Synthesis and applications. Single ecosystem functions can be positively or negatively affected by microplastics fibres depending on soil water status. However, our results suggest that microplastic fibres may cause negative effects on ecosystem soil multifunctionality of a similar magnitude as drought. Thus, strategies to counteract this new global change factor are necessary.</p>  </p>", "keywords": ["2. Zero hunger", "570", "ddc:630", "nutrient cycling", "litter decomposition", "500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; Biologie", "04 agricultural and veterinary sciences", "15. Life on land", "soil respiration", "01 natural sciences", "6. Clean water", "soil aggregation", "soil pH", "grasslands ecosystem", "13. Climate action", "nutrient leaching", "0401 agriculture", " forestry", " and fisheries", "ddc:570", "Institut f\u00fcr Biochemie und Biologie", "enzymatic activities", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://besjournals.onlinelibrary.wiley.com/doi/pdf/10.1111/1365-2664.13839"}, {"href": "https://doi.org/10.1111/1365-2664.13839"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Applied%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/1365-2664.13839", "name": "item", "description": "10.1111/1365-2664.13839", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/1365-2664.13839"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-02-10T00:00:00Z"}}, {"id": "10.1126/science.abq4062", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:17:58Z", "type": "Journal Article", "created": "2022-11-24", "title": "Grazing and ecosystem service delivery in global drylands", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Grazing represents the most extensive use of land worldwide. Yet its impacts on ecosystem services remain uncertain because pervasive interactions between grazing pressure, climate, soil properties, and biodiversity may occur but have never been addressed simultaneously. Using a standardized survey at 98 sites across six continents, we show that interactions between grazing pressure, climate, soil, and biodiversity are critical to explain the delivery of fundamental ecosystem services across drylands worldwide. Increasing grazing pressure reduced ecosystem service delivery in warmer and species-poor drylands, whereas positive effects of grazing were observed in colder and species-rich areas. Considering interactions between grazing and local abiotic and biotic factors is key for understanding the fate of dryland ecosystems under climate change and increasing human pressure.</p></article>", "keywords": ["[SDE] Environmental Sciences", "570", "Ecosystem services (ES)", "Livestock", "Climate", "Climate Change", "Wild", "630", "Dryland", "Soil", "SDG-02: Zero hunger", "XXXXXX - Unknown", "Climate change", "Humans", "Ecosystem services", "grazing", "Herbivory", "14. Life underwater", "climate", "Institut f\u00fcr Biochemie und Biologie", "Ecosystem", "biodiversity", "SDG-15: Life on land", "2. Zero hunger", "Systems", "Drylands", "Qu\u00edmica", "Biodiversity", "15. Life on land", "Grazing", "13. Climate action", "[SDE]Environmental Sciences", "ddc:570", "ecosystem services", "Rangeland"]}, "links": [{"href": "https://doi.org/10.1126/science.abq4062"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1126/science.abq4062", "name": "item", "description": "10.1126/science.abq4062", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1126/science.abq4062"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-25T00:00:00Z"}}, {"id": "10.3389/fenvs.2021.744668", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:19:15Z", "type": "Journal Article", "created": "2021-09-20", "title": "Time-dependent toxicity of tire particles on soil nematodes", "description": "<p>Tire-wear particles (TWPs) are being released into the environment by wearing down during car driving, and are considered an important microplastic pollution source. The chemical additive leaching from these polymer-based materials and its potential effects are likely temporally dynamic, since amounts of potentially toxic compounds can gradually increase with contact time of plastic particles with surrounding media. In the present study, we conducted soil toxicity tests using the soil nematode Caenorhabditis elegans with different soil pre-incubation (30 and 75\uffc2\uffa0days) and exposure (short-term exposure, 2\uffc2\uffa0days; lifetime exposure, 10\uffc2\uffa0days) times. Soil pre-incubation increased toxicity of TWPs, and the effective concentrations after the pre-incubation were much lower than environmentally relevant concentrations. The lifetime of C. elegans was reduced faster in the TWP treatment groups, and the effective concentration for lifetime exposure tests were 100- to 1,000-fold lower than those of short-term exposure tests. Water-extractable metal concentrations (Cr, Cu, Ni, Pb, and Zn) in the TWP-soils showed no correlation with nominal TWP concentrations or pre-incubation times, and the incorporated metals in the TWPs may be not the main reason of toxicity in this study. Our results show that toxic effects of TWPs can be time-dependent, both in terms of the microplastic particles themselves and their interactions in the soil matrix, but also because of susceptibility of target organisms depending on developmental stage. It is vital that future works consider these aspects, since otherwise effects of microplastics and TWPs could be underestimated.</p>", "keywords": ["lifetime", "570", "exposure time", "microplastics", "ddc:540", "0211 other engineering and technologies", "500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; Biologie", "02 engineering and technology", "01 natural sciences", "soil incubation", "Environmental sciences", "13. Climate action", "GE1-350", "Caenorhabditis elegans", "Institut f\u00fcr Biochemie und Biologie", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.3389/fenvs.2021.744668"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Environmental%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fenvs.2021.744668", "name": "item", "description": "10.3389/fenvs.2021.744668", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fenvs.2021.744668"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-06-30T00:00:00Z"}}, {"id": "10.3389/fmicb.2019.02904", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:19:16Z", "type": "Journal Article", "created": "2020-01-09", "title": "Fungal Traits Important for Soil Aggregation", "description": "Soil structure, the complex arrangement of soil into aggregates and pore spaces, is a key feature of soils and soil biota. Among them, filamentous saprobic fungi have well-documented effects on soil aggregation. However, it is unclear what properties, or traits, determine the overall positive effect of fungi on soil aggregation. To achieve progress, it would be helpful to systematically investigate a broad suite of fungal species for their trait expression and the relation of these traits to soil aggregation. Here, we apply a trait-based approach to a set of 15 traits measured under standardized conditions on 31 fungal strains including Ascomycota, Basidiomycota, and Mucoromycota, all isolated from the same soil. We find large differences among these fungi in their ability to aggregate soil, including neutral to positive effects, and we document large differences in trait expression among strains. We identify biomass density, i.e., the density with which a mycelium grows (positive effects), leucine aminopeptidase activity (negative effects) and phylogeny as important factors explaining differences in soil aggregate formation (SAF) among fungal strains; importantly, growth rate was not among the important traits. Our results point to a typical suite of traits characterizing fungi that are good soil aggregators, and our findings illustrate the power of employing a trait-based approach to unravel biological mechanisms underpinning soil aggregation. Such an approach could now be extended also to other soil biota groups. In an applied context of restoration and agriculture, such trait information can inform management, for example to prioritize practices that favor the expression of more desirable fungal traits.", "keywords": ["saprobic fungi", "0301 basic medicine", "2. Zero hunger", "ddc:500", "570", "0303 health sciences", "Saprobic fungi", "500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; Biologie", "15. Life on land", "Traits", "leucine amino peptidases", "Microbiology", "QR1-502", "soil aggregation", "03 medical and health sciences", "traits", "biomass density", "Soil aggregation", "Biomass density", "Leucine amino peptidases", "Institut f\u00fcr Biochemie und Biologie", "random forest", "Random forest"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2019.02904"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2019.02904", "name": "item", "description": "10.3389/fmicb.2019.02904", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2019.02904"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-01-09T00:00:00Z"}}, {"id": "10.3389/fsoil.2022.1020869", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:19:18Z", "type": "Journal Article", "created": "2022-11-16", "title": "Deciphering the microbial composition of biodynamic preparations and their effects on the apple rhizosphere microbiome", "description": "<p>Soil microbial communities are crucial for plant growth and are already depleted by anthropogenic activities. The application of microbial transplants provides a strategy to restore beneficial soil traits, but less is known about the microbiota of traditional inoculants used in biodynamic agriculture. In this study, we used amplicon sequencing and quantitative PCR to decipher microbial communities of composts, biodynamic manures, and plant preparations from Austria and France. In addition, we investigated the effect of extracts derived from biodynamic manure and compost on the rhizosphere microbiome of apple trees. Microbiota abundance, composition, and diversity of biodynamic manures, plant preparations, and composts were distinct. Microbial abundances ranged between 1010-1011(bacterial 16S rRNA genes) and 109-1011(fungal ITS genes). The bacterial diversity was significantly higher in biodynamic manures compared to compost without discernible differences in abundance. Fungal diversity was not significantly different while abundance was increased in biodynamic manures. The microbial communities of biodynamic manures and plant preparations were specific for each production site, but all contain potentially plant-beneficial bacterial genera. When applied in apple orchards, biodynamic preparations (extracts) had the non-significant effect of reducing bacterial and fungal abundance in apple rhizosphere (4 months post-application), while increasing fungal and lowering bacterial Shannon diversity. One to four months after inoculation, individual taxa indicated differential abundance. We observed the reduction of the pathogenic fungusAlternaria, and the enrichment of potentially beneficial bacterial genera such asPseudomonas.Our study paves way for the science-based adaptation of empirically developed biodynamic formulations under different farming practices to restore the vitality of agricultural soils.</p", "keywords": ["2. Zero hunger", "0301 basic medicine", "0303 health sciences", "rhizosphere microbiome", "Engineering geology. Rock mechanics. Soil mechanics. Underground construction", "15. Life on land", "16S rRNA/ITS amplicon sequencing", "biodynamic farming", "Chemistry", "03 medical and health sciences", "biodynamic manures", "compost microbiome", "TA703-712", "ddc:580", "biodynamic preparations", "QD1-999", "Institut f\u00fcr Biochemie und Biologie"]}, "links": [{"href": "https://doi.org/10.3389/fsoil.2022.1020869"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Soil%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fsoil.2022.1020869", "name": "item", "description": "10.3389/fsoil.2022.1020869", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fsoil.2022.1020869"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-16T00:00:00Z"}}, {"id": "10072/411486", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:22:00Z", "type": "Journal Article", "created": "2021-11-25", "title": "Cross-continental importance of CH4 emissions from dry inland-waters", "description": "Despite substantial advances in quantifying greenhouse gas (GHG) emissions from dry inland waters, existing estimates mainly consist of carbon dioxide (CO2) emissions. However, methane (CH4) may also be relevant due to its higher Global Warming Potential (GWP). We report CH4 emissions from dry inland water sediments to i) provide a cross-continental estimate of such emissions for different types of aquatic systems (i.e., lakes, ponds, reservoirs, and streams) and climate zones (i.e., tropical, continental, and temperate); and ii) determine the environmental factors that control these emissions. CH4 emissions from dry inland waters were consistently higher than emissions observed in adjacent uphill soils, across climate zones and in all aquatic systems except for streams. However, the CH4 contribution (normalized to CO2 equivalents; CO2-eq) to the total GHG emissions of dry inland waters was similar for all types of aquatic systems and varied from 10 to 21%. Although we discuss multiple controlling factors, dry inland water CH4 emissions were most strongly related to sediment organic matter content and moisture. Summing CO2 and CH4 emissions revealed a cross-continental average emission of 9.6\u00a0\u00b1\u00a017.4\u00a0g\u00a0CO2-eq\u00a0m-2\u00a0d-1 from dry inland waters. We argue that increasing droughts likely expand the worldwide surface area of atmosphere-exposed aquatic sediments, thereby increasing global dry inland water CH4 emissions. Hence, CH4 cannot be ignored if we want to fully understand the carbon (C) cycle of dry sediments.", "keywords": ["0106 biological sciences", "550", "Nitrous Oxide", "Aquatic Ecology", "Carbon Dioxide", "15. Life on land", "01 natural sciences", "6. Clean water", "[SDU] Sciences of the Universe [physics]", "Greenhouse Gases", "Lakes", "Rivers", "[SDU]Sciences of the Universe [physics]", "13. Climate action", "Ecological Microbiology", "11. Sustainability", "ddc:570", "Methane", "Institut f\u00fcr Biochemie und Biologie", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10072/411486"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10072/411486", "name": "item", "description": "10072/411486", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10072/411486"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-03-01T00:00:00Z"}}, {"id": "2164/17550", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:22:45Z", "type": "Journal Article", "created": "2020-11-07", "title": "Ensemble modelling, uncertainty and robust predictions of organic carbon in long\u2010term bare\u2010fallow soils", "description": "Abstract<p>Simulation models represent soil organic carbon (SOC) dynamics in global carbon (C) cycle scenarios to support climate\uffe2\uff80\uff90change studies. It is imperative to increase confidence in long\uffe2\uff80\uff90term predictions of SOC dynamics by reducing the uncertainty in model estimates. We evaluated SOC simulated from an ensemble of 26 process\uffe2\uff80\uff90based C models by comparing simulations to experimental data from seven long\uffe2\uff80\uff90term bare\uffe2\uff80\uff90fallow (vegetation\uffe2\uff80\uff90free) plots at six sites: Denmark (two sites), France, Russia, Sweden and the United Kingdom. The decay of SOC in these plots has been monitored for decades since the last inputs of plant material, providing the opportunity to test decomposition without the continuous input of new organic material. The models were run independently over multi\uffe2\uff80\uff90year simulation periods (from 28 to 80\uffc2\uffa0years) in a blind test with no calibration (Bln) and with the following three calibration scenarios, each providing different levels of information and/or allowing different levels of model fitting: (a) calibrating decomposition parameters separately at each experimental site (Spe); (b) using a generic, knowledge\uffe2\uff80\uff90based, parameterization applicable in the Central European region (Gen); and (c) using a combination of both (a) and (b) strategies (Mix). We addressed uncertainties from different modelling approaches with or without spin\uffe2\uff80\uff90up initialization of SOC. Changes in the multi\uffe2\uff80\uff90model median (MMM) of SOC were used as descriptors of the ensemble performance. On average across sites, Gen proved adequate in describing changes in SOC, with MMM equal to average SOC (and standard deviation) of 39.2 (\uffc2\uffb115.5)\uffc2\uffa0Mg\uffc2\uffa0C/ha compared to the observed mean of 36.0 (\uffc2\uffb119.7)\uffc2\uffa0Mg\uffc2\uffa0C/ha (last observed year), indicating sufficiently reliable SOC estimates. Moving to Mix (37.5\uffc2\uffa0\uffc2\uffb1\uffc2\uffa016.7\uffc2\uffa0Mg\uffc2\uffa0C/ha) and Spe (36.8\uffc2\uffa0\uffc2\uffb1\uffc2\uffa019.8\uffc2\uffa0Mg\uffc2\uffa0C/ha) provided only marginal gains in accuracy, but modellers would need to apply more knowledge and a greater calibration effort than in Gen, thereby limiting the wider applicability of models.</p", "keywords": ["[SDE] Environmental Sciences", "330", "550", "Supplementary Data", "soil organic carbon dynamics", "QH301 Biology", "[SDE.MCG]Environmental Sciences/Global Changes", "Soil organic carbon dynamics", "bare\u2010fallow soils", "[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study", "630", "protocol for model comparison", "Russia", "QH301", "Soil", "NE/M021327/1", "SDG 13 - Climate Action", "Environmental Chemistry", "774378", "process based models", "European Commission", "[SDV.SA.SDS] Life Sciences [q-bio]/Agricultural sciences/Soil study", "Institut f\u00fcr Biochemie und Biologie", "General Environmental Science", "Sweden", "Global and Planetary Change", "Ecology", "Natural Environment Research Council (NERC)", "NE/P019455/1", "bare-fallow soils", "Uncertainty", "Agriculture", "04 agricultural and veterinary sciences", "15. Life on land", "Carbon", "United Kingdom", "process-based models", "[SDE.MCG] Environmental Sciences/Global Changes", "13. Climate action", "[SDE]Environmental Sciences", "bare-fallow soils; model parametrization; process-based models; protocol for model comparison; soil organic carbon dynamics", "0401 agriculture", " forestry", " and fisheries", "774124", "ddc:570", "France", "bare fallow soils", "model parametrization"]}, "links": [{"href": "https://air.unimi.it/bitstream/2434/809186/2/GCB-20-1834_Proof_fl.pdf"}, {"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/gcb.15441"}, {"href": "https://doi.org/2164/17550"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "2164/17550", "name": "item", "description": "2164/17550", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/2164/17550"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-11-24T00:00:00Z"}}, {"id": "2263/91312", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:22:46Z", "type": "Journal Article", "created": "2022-11-24", "title": "Grazing and ecosystem service delivery in global drylands", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Grazing represents the most extensive use of land worldwide. Yet its impacts on ecosystem services remain uncertain because pervasive interactions between grazing pressure, climate, soil properties, and biodiversity may occur but have never been addressed simultaneously. Using a standardized survey at 98 sites across six continents, we show that interactions between grazing pressure, climate, soil, and biodiversity are critical to explain the delivery of fundamental ecosystem services across drylands worldwide. Increasing grazing pressure reduced ecosystem service delivery in warmer and species-poor drylands, whereas positive effects of grazing were observed in colder and species-rich areas. Considering interactions between grazing and local abiotic and biotic factors is key for understanding the fate of dryland ecosystems under climate change and increasing human pressure.</p></article>", "keywords": ["[SDE] Environmental Sciences", "Climate", "Edafolog\u00eda (Biolog\u00eda)", "630", "3104 Producci\u00f3n Animal", "Dryland", "Soil", "636", "2511.06 Conservaci\u00f3n de Suelos", "591.5", "Climate change", "3104.90 Sistemas de Producci\u00f3n Ganadera", "biodiversity", "2. Zero hunger", "2417.13 Ecolog\u00eda Vegetal", "Qu\u00edmica", "Biodiversity", "2502 Climatolog\u00eda", "Grazing", "2401.06 Ecolog\u00eda Animal", "[SDE]Environmental Sciences", "ddc:570", "Rangeland", "581.5", "Ecolog\u00eda (Biolog\u00eda)", "570", "632.11", "Ecosystem services (ES)", "Livestock", "Climate Change", "631.45", "Wild", "SDG-02: Zero hunger", "XXXXXX - Unknown", "Humans", "Ecosystem services", "grazing", "Herbivory", "14. Life underwater", "climate", "Institut f\u00fcr Biochemie und Biologie", "631.585", "Ecosystem", "551.583", "SDG-15: Life on land", "3103.10 Pastos", "Systems", "Drylands", "15. Life on land", "13. Climate action", "58.032.3", "Veterinaria", "ecosystem services"]}, "links": [{"href": "https://repositorio.ulisboa.pt/bitstream/10451/56169/1/abq4062_CombinedPDF_v4.pdf"}, {"href": "https://doi.org/2263/91312"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "2263/91312", "name": "item", "description": "2263/91312", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/2263/91312"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-25T00:00:00Z"}}, {"id": "24e2d89a-a263-495d-bd27-8a05a35d53e9-bundesamt-fur-umwelt-bafu", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:22:49Z", "type": "Dataset", "title": "Geochemical soil atlas of Switzerland: Cadmium", "description": "Interpolated cadmium concentrations (mg/kg fine soil) in the topsoils (0-20 cm) of Switzerland. For the Ordinary Kriging Interpolations (1 km x 1 km), measurement data from a total of 1,201 sites of the Swiss Biodiversity Monitoring System, the National Soil Observation System and the European Soil Geochemical Atlas were taken into account. Element concentrations were analyzed in aqua regia outcrop (HNO3:HCl:H2O) from dried (40\u00b0C), sieved (< 2 mm) and subsequently ground soil samples using inductively coupled plasma mass spectrometry. Sites with known anthropogenic over-embossing of element concentrations (point sources) were excluded in advance. The results of the soil geochemical atlas are a snapshot of the element concentrations in the topsoils of Switzerland (sampling period 2011-2015). The interpolated maps serve to improve the visualization of regions with elevated or low concentrations. However, no parcel-sharp information or definitive conclusions on the geology, bioavailability, the percentage distribution of geogenous and anthropogenic sources as well as the load on the soil can be derived from this. Quotation of Publication: J. E. Reusser, M. B. Siegenthaler, L. H. E. Winkel, D. W\u00e4chter, R. Kretzschmar, R. G. Meuli: Geochemical soil atlas of Switzerland. Agroscope, Zurich, 2023.", "formats": [{"name": "HTML"}], "keywords": ["atlante", "atlas", "bgdi-bundesgeodaten-infrastruktur", "biochemie", "biochemistry", "biochimica", "biochimie", "boden", "bodenkartierung", "bodenqualitat", "bund", "carico-da-metalli-pesanti", "cartographie-des-sols", "ch", "charge-en-metaux-lourds", "confederation", "confederazione", "contenuto-in-nutrienti", "fsdi-federal-spatial-data-infrastructure", "heavy-metal-load", "ifdg-infrastruttura-federale-dei-dati-geografici", "ifdg-linfrastructure-federale-de-donnees-geographiques", "mappatura-del-suolo", "metal-toxique", "metalli-tossici", "nahrstoffgehalt", "nutrient-content", "qualita-del-suolo", "qualite-du-sol", "schwermetallbelastung", "soil", "soil-mapping", "soil-quality", "sol", "suolo", "teneur-en-nutriments", "toxic-metal", "toxische-metalle"], "contacts": [{"organization": "boden@bafu.admin.ch", "roles": ["creator"]}, {"organization": "https://opendata.swiss/organization/bundesamt-fur-umwelt-bafu", "roles": ["publisher"]}]}, "links": [{"href": "https://data.geo.admin.ch/browser/index.html#/collections/ch.bafu.geochemischer-bodenatlas_schweiz_cadmium/items/geochemischer-bodenatlas_schweiz_cadmium"}, {"href": "https://map.geo.admin.ch/?layers=ch.bafu.geochemischer-bodenatlas_schweiz_cadmium"}, {"href": "https://wms.geo.admin.ch/?SERVICE=WMS&VERSION=1.3.0&REQUEST=GetCapabilities&lang=de"}, {"href": "https://wmts.geo.admin.ch/EPSG/3857/1.0.0/WMTSCapabilities.xml?lang=de"}, {"href": "https://www.agroscope.admin.ch/agroscope/de/home/themen/umwelt-ressourcen/boden-gewaesser-naehrstoffe/nabo/ergaenzende-untersuchungen/geochemischer-bodenatlas.html"}, {"href": "http://data.europa.eu/88u/dataset/24e2d89a-a263-495d-bd27-8a05a35d53e9-bundesamt-fur-umwelt-bafu"}, {"rel": "self", "type": "application/geo+json", "title": "24e2d89a-a263-495d-bd27-8a05a35d53e9-bundesamt-fur-umwelt-bafu", "name": "item", "description": "24e2d89a-a263-495d-bd27-8a05a35d53e9-bundesamt-fur-umwelt-bafu", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/24e2d89a-a263-495d-bd27-8a05a35d53e9-bundesamt-fur-umwelt-bafu"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"null": "date"}}, {"id": "PMC9052558", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:24:44Z", "type": "Journal Article", "created": "2022-04-28", "title": "Insights into the microbiome assembly during different growth stages and storage of strawberry plants", "description": "AbstractBackground<p>Microbiome assembly was identified as an important factor for plant growth and health, but this process is largely unknown, especially for the fruit microbiome. Therefore, we analyzed strawberry plants of two cultivars by focusing on microbiome tracking during the different growth stages and storage using amplicon sequencing, qPCR, and microscopic approaches.</p>Results<p>Strawberry plants carried a highly diverse microbiome, therein the bacterial familiesSphingomonadaceae(25%),Pseudomonadaceae(17%), andBurkholderiaceae(11%); and the fungal familyMycosphaerella(45%) were most abundant. All compartments were colonized by high number of bacteria and fungi (107\uffe2\uff80\uff931010marker gene copies per g fresh weight), and were characterized by high microbial diversity (6049 and 1501 ASVs); both were higher for the belowground samples\uffc2\uffa0than in the phyllosphere. Compartment type was the main driver of microbial diversity, structure, and abundance (bacterial: 45%; fungal: 61%) when compared to the cultivar (1.6%; 2.2%). Microbiome assembly was strongly divided for belowground habitats\uffc2\uffa0and the phyllosphere; only a low proportion of the microbiome was transferred from soil via the rhizosphere to the phyllosphere. During fruit development, we observed the highest rates of microbial transfer from leaves\uffc2\uffa0and flowers to ripe fruits, where most of the bacteria occured inside the pulp. In postharvest fruits, microbial diversity decreased while the overall abundance increased. Developing postharvest decay caused byBotrytis cinereadecreased the\uffc2\uffa0diversity as well, and induced a reduction of potentially beneficial taxa.</p>Conclusion<p>Our findings provide insights into microbiome assembly in strawberry plants and highlight the importance of microbe\uffc2\uffa0transfer during fruit development and storage with potential implications for food health and safety.</p", "keywords": ["0301 basic medicine", "2. Zero hunger", "0303 health sciences", "Fruit pathogens", "ddc:540", "15. Life on land", "Microbiology", "Microbiome assembly", "Bacterial communities", "QR1-502", "Fungal communities", "Environmental sciences", "03 medical and health sciences", "Fragaria\u2009\u00d7\u2009ananassa", "GE1-350", "ddc:570", "Institut f\u00fcr Biochemie und Biologie", "Amplicon sequencing", "Research Article"]}, "links": [{"href": "https://link.springer.com/content/pdf/10.1186/s40793-022-00415-3.pdf"}, {"href": "https://doi.org/PMC9052558"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Microbiome", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "PMC9052558", "name": "item", "description": "PMC9052558", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PMC9052558"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-04-28T00:00:00Z"}}, {"id": "dc524564-eb7c-4cee-ae2c-974d8bd7eade-bundesamt-fur-umwelt-bafu", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-21T16:25:58Z", "type": "Dataset", "title": "Geochemical soil atlas of Switzerland: Chromium", "description": "Interpolated chromium concentrations (mg/kg fine earth) in the topsoils (0-20 cm) of Switzerland. For the Ordinary Kriging Interpolations (1 km x 1 km), measurement data from a total of 1,201 sites of the Swiss Biodiversity Monitoring System, the National Soil Observation System and the European Soil Geochemical Atlas were taken into account. Element concentrations were analyzed in aqua regia outcrop (HNO3:HCl:H2O) from dried (40\u00b0C), sieved (< 2 mm) and subsequently ground soil samples using inductively coupled plasma mass spectrometry. Sites with known anthropogenic over-embossing of element concentrations (point sources) were excluded in advance. The results of the soil geochemical atlas are a snapshot of the element concentrations in the topsoils of Switzerland (sampling period 2011-2015). The interpolated maps serve to improve the visualization of regions with elevated or low concentrations. However, no parcel-sharp information or definitive conclusions on the geology, bioavailability, the percentage distribution of geogenous and anthropogenic sources as well as the load on the soil can be derived from this. Quotation of Publication: J. E. Reusser, M. B. Siegenthaler, L. H. E. Winkel, D. W\u00e4chter, R. Kretzschmar, R. G. Meuli: Geochemical soil atlas of Switzerland. Agroscope, Zurich, 2023.", "formats": [{"name": "HTML"}], "keywords": ["bgdi-bundesgeodaten-infrastruktur", "biochemie", "biochemistry", "biochimica", "biochimie", "boden", "bodenkartierung", "bodenqualitat", "bund", "carico-da-metalli-pesanti", "cartographie-des-sols", "ch", "charge-en-metaux-lourds", "confederation", "confederazione", "fsdi-federal-spatial-data-infrastructure", "heavy-metal-load", "ifdg-infrastruttura-federale-dei-dati-geografici", "ifdg-linfrastructure-federale-de-donnees-geographiques", "interpolation", "interpolazione", "mappatura-del-suolo", "metal-toxique", "metalli-tossici", "qualita-del-suolo", "qualite-du-sol", "schwermetallbelastung", "soil", "soil-mapping", "soil-quality", "sol", "suolo", "toxic-metal", "toxische-metalle"], "contacts": [{"organization": "boden@bafu.admin.ch", "roles": ["creator"]}, {"organization": "https://opendata.swiss/organization/bundesamt-fur-umwelt-bafu", "roles": ["publisher"]}]}, "links": [{"href": "https://data.geo.admin.ch/browser/index.html#/collections/ch.bafu.geochemischer-bodenatlas_schweiz_chrom/items/geochemischer-bodenatlas_schweiz_chrom"}, {"href": "https://map.geo.admin.ch/?layers=ch.bafu.geochemischer-bodenatlas_schweiz_chrom"}, {"href": "https://wms.geo.admin.ch/?SERVICE=WMS&VERSION=1.3.0&REQUEST=GetCapabilities&lang=de"}, {"href": "https://wmts.geo.admin.ch/EPSG/3857/1.0.0/WMTSCapabilities.xml?lang=de"}, {"href": "https://www.agroscope.admin.ch/agroscope/de/home/themen/umwelt-ressourcen/boden-gewaesser-naehrstoffe/nabo/ergaenzende-untersuchungen/geochemischer-bodenatlas.html"}, {"href": "http://data.europa.eu/88u/dataset/dc524564-eb7c-4cee-ae2c-974d8bd7eade-bundesamt-fur-umwelt-bafu"}, {"rel": "self", "type": "application/geo+json", "title": "dc524564-eb7c-4cee-ae2c-974d8bd7eade-bundesamt-fur-umwelt-bafu", "name": "item", "description": "dc524564-eb7c-4cee-ae2c-974d8bd7eade-bundesamt-fur-umwelt-bafu", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/dc524564-eb7c-4cee-ae2c-974d8bd7eade-bundesamt-fur-umwelt-bafu"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"null": "date"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=biochemie&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=biochemie&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=biochemie&", "hreflang": "en-US"}, {"rel": "last", "type": "application/geo+json", "title": "items (last)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=biochemie&offset=15", "hreflang": "en-US"}], "numberMatched": 15, "numberReturned": 15, "distributedFeatures": [], "timeStamp": "2026-09-22T13:58:24.418579Z"}