{"type": "FeatureCollection", "features": [{"id": "10.1016/j.agee.2011.08.020", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:15:16Z", "type": "Journal Article", "created": "2011-10-08", "title": "Controls over soil microbial biomass responses to carbon amendments in agricultural systems: A meta-analysis", "description": "Soil microbial biomass (MB) facilitates key ecosystem functions such as soil aggregation and nutrient cycling and makes a substantial contribution to soil organic matter. While agricultural conversion drastically reduces MB, the use of organic amendments is an effective way to rebuild depleted MB. Yet, little is known about broad-scale, global controls over MB responses to organic inputs. We used a meta-analysis to identify the degree to which soil properties, agricultural management, and geographic location regulate MB response (carbon, Cmic; nitrogen, Nmic; and C:N ratio, C:Nmic) to animal manure-based inputs relative to inorganic fertilizers. We show that organic amendments increased Cmic by 36% and Nmic by 27% across all observations. The chemistry of amendments and their application rates were the strongest regulators of Cmic but edaphic properties were also important. C:Nmic averaged 8.6 and was not influenced by organic amendments under any conditions, providing evidence that the physiological requirements of microbes, rather than management or environmental factors, constrain their elemental stoichiometry. Our study indicates that even small quantities of organic amendments can be used to rapidly restore MB across a range of cropping systems but specific responses depend upon the type and rate of inputs as well soil characteristics.", "keywords": ["2. Zero hunger", "Nitrogen", "Microbial biomass", "Agriculture", "Compost", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "Carbon", "Manure", "13. Climate action", "Fertilization", "Soils", "0401 agriculture", " forestry", " and fisheries"], "contacts": [{"organization": "Kallenbach, Cynthia M., Grandy, A. Stuart,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2011.08.020"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2011.08.020", "name": "item", "description": "10.1016/j.agee.2011.08.020", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2011.08.020"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-11-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2014.07.027", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:16:44Z", "type": "Journal Article", "created": "2014-08-24", "title": "Crop Rotation Complexity Regulates The Decomposition Of High And Low Quality Residues", "description": "While many ecosystem processes depend on biodiversity, the relationships between agricultural plant diversity and soil carbon (C) and nitrogen (N) dynamics remains controversial. Our objective was to examine how temporal plant diversity (i.e. crop rotation) influences residue decomposition, a key ecosystem function that regulates nutrient cycling, greenhouse gas emissions, and soil organic matter formation. We incubated soils from five long-term crop rotations, located at W.K. Kellogg Biological Station LTER in southwestern Michigan, USA, with and without four chemically diverse crop residues. Increasing crop biodiversity increased soil potentially mineralizable C by 125%, increased hydrolytic enzyme activity by 46%, but decreased oxidative enzyme activity by 20% in soils before residue was added. After residue additions, soils from more diverse cropping systems decomposed all residues more rapidly (0.2e8.3% greater mass loss) compared to monoculture corn. The fast-cycling, \u2018Active C\u2019 pool and microbial biomass N increased with higher cropping diversity, but the differences among rotations in Active C pools was higher for the most recalcitrant residues. Further, the ratio of the cellulose degrading enzyme ( b-glucosidase) to the lignin degrading enzyme (phenol oxidase) was highest in the two most diverse crop rotations regardless of residue additions, providing additional evidence of enhanced microbial activity and substrate acquisition in more diverse rotations. Our study shows that crop diversity over time influences the processing of newly-added residues, microbial dynamics, and nutrient cycling. Diversifying crop rotations has the potential to enhance soil ecosystem functions and is critical to maintaining soil services in agricultural systems.", "keywords": ["2. Zero hunger", "Nitrogen mineralization", "Litter quality", "Carbon mineralization", "Microbial biomass", "04 agricultural and veterinary sciences", "Extracellular enzymes", "Biogeochemistry", "15. Life on land", "01 natural sciences", "13. Climate action", "Plant biodiversity", "0401 agriculture", " forestry", " and fisheries", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2014.07.027"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2014.07.027", "name": "item", "description": "10.1016/j.soilbio.2014.07.027", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2014.07.027"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-11-01T00:00:00Z"}}, {"id": "20.500.14243/521778", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:24:52Z", "type": "Journal Article", "created": "2020-12-23", "title": "CASCADE \u2013 The Circum-Arctic Sediment CArbon DatabasE", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Abstract. Biogeochemical cycling in the extensive shelf seas and in the interior basins of the semi-enclosed Arctic Ocean are strongly influenced by land-ocean transport of carbon and other elements. The Arctic carbon cycle system is also inherently connected with the climate, and thus vulnerable to environmental and climate changes. Sediments of the Arctic Ocean are an active and integral part in Arctic biogeochemical cycling, and provide the opportunity to study present and historical input and fate of organic matter (e.g., through permafrost thawing). To compare differences between the Arctic regions and to study Arctic biogeochemical budgets, comprehensive sedimentary records are required. To this end, the Circum-Arctic Sediment CArbon DatabasE (CASCADE) was established to curate data primarily on concentrations of organic carbon (OC) and OC isotopes (\u03b413C, \u039414C), yet also on total N (TN) as well as of terrigenous biomarkers and other sediment geochemical and physical properties drawn both from the published literature and from earlier unpublished records through an extensive international community collaboration. This paper describes the establishment, structure and current status of CASCADE. This first public version includes OC concentrations in surface sediments at 4244 oceanographic stations including 2317 with TN concentrations, 1555 with \u03b413C-OC values, 268 with \u039414C-OC values and 653 records with quantified terrigenous biomarkers (high molecular weight n-alkanes, n-alkanoic acids and lignin phenols) distributed over the shelves and the central basins of the Arctic Ocean. CASCADE also includes data from 326 sediment cores, retrieved by shallow box- or multi-coring and deep gravity/piston coring, as well as sea-bottom drilling. The comprehensive dataset reveals several large-scale features, including clear differences in both OC content and isotope-based diagnostics of OC sources between the shelf sea recipients. This indicates, for instance, the release of strongly pre-aged terrigenous OC to the East Siberian Arctic shelf and younger terrigenous OC to the Kara Sea and thus provides clues about land-ocean transport of material released by thawing permafrost. CASCADE enables synoptic analysis of OC in Arctic Ocean sediments and facilitates a wide array of future empirical and modelling studies of the Arctic carbon cycle. CASCADE is openly and freely available online (https://doi.org/10.17043/cascade; Martens et al., 2020b), is provided in various machine-readable data formats (data tables, GIS shapefile, GIS raster), and also provides ways for contributing data for future CASCADE versions. CASCADE will be continuously updated with newly published and contributed data over the foreseeable future as part of the database management of the Bolin Centre for Climate Research at Stockholm University.</p></article>", "keywords": ["QE1-996.5", "Climate Research", "Klimaendringer / Climate change", "VDP::Matematikk og naturvitenskap: 400::Geofag: 450::Oseanografi: 452", "Milj\u00f8vitenskap / Environmental sciences", "Geology", "01 natural sciences", "Climate Science", "Klimatforskning", "Environmental sciences", "13. Climate action", "Biogeochemistry / Biogeochemistry", "GE1-350", "SDG 14 - Life Below Water", "14. Life underwater", "VDP::Mathematics and natural scienses: 400::Geosciences: 450::Oceanography: 452", "Klimatvetenskap", "permafrost", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://essd.copernicus.org/articles/13/2561/2021/essd-13-2561-2021.pdf"}, {"href": "https://doi.org/20.500.14243/521778"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Earth%20System%20Science%20Data", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "20.500.14243/521778", "name": "item", "description": "20.500.14243/521778", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/20.500.14243/521778"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-12-23T00:00:00Z"}}, {"id": "10.1016/j.foreco.2004.03.018", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-04-16T16:15:58Z", "type": "Journal Article", "created": "2004-05-29", "title": "Chronic Nitrogen Enrichment Affects The Structure And Function Of The Soil Microbial Community In Temperate Hardwood And Pine Forests", "description": "We examined how chronic nitrogen (N) enrichment of pine and hardwood forest stands has affected the relative abundance, functional capacity, and activity of soil bacteria and fungi. During Fall 2002 we collected one soil core (5.6 cm diameter; organic horizon plus 10 cm of mineral soil) from each of four 5 m \ufffd 5 m subplots within the control, low N (5 g N m \ufffd 2 per year), and high N (15 g N m \ufffd 2 per year) plots in both the hardwood and pine stands at the Chronic Nitrogen Amendment Study at Harvard Forest. The samples were analyzed for total and active bacterial and fungal biomass, microbial catabolic response profiles, the activities of cellulolytic and ligninolytic enzymes, and total, labile and microbially derived organic carbon (C). Live, fine roots were also collected from the control and low N pine plots and analyzed for ectomycorrhizal fungal community composition and diversity. Active fungal biomass was 27\u201061% and 42\u201069% lower in the fertilized compared to control plots in the hardwood and pine stands, respectively. Active bacterial biomass was not greatly affected by N additions, resulting in significantly lower fungal:bacterial biomass ratios in the N-treated plots. This shift in microbial community composition was accompanied by a significant reduction in the activity of phenol oxidase, a lignin-degrading enzyme produced by white-rot fungi. In the pine stand, ectomycorrhizal fungal community diversity was lower in the low N-treated plot than in the control plot. Differences in ectomycorrhizal community structure were also detected between control and fertilized pine plots, including a reduction in those species with the highest relative frequencies in the control community. Finally, N enrichment altered the pattern of microbial substrate use, with the relative response to the addition of carboxylic acids and carbohydrates being significantly lower in the Ntreated plots, even after the data were normalized to account for differences in microbial biomass. These patterns are consistent with lower decomposition rates and altered N cycling observed previously at this site. # 2004 Elsevier B.V. All rights reserved.", "keywords": ["2. Zero hunger", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land"]}, "links": [{"href": "https://doi.org/10.1016/j.foreco.2004.03.018"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Forest%20Ecology%20and%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.foreco.2004.03.018", "name": "item", "description": "10.1016/j.foreco.2004.03.018", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.foreco.2004.03.018"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-07-01T00:00:00Z"}}, {"id": "02543d0a-f43a-4ab7-886a-c748d714a9e6-bundesamt-fur-umwelt-bafu", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:13:53Z", "type": "Dataset", "title": "Geochemical soil atlas of Switzerland: Thallium", "description": "Interpolierte Element-Konzentrationen (mg/kg Feinerde) in den Oberb\u00f6den (0\u201320 cm) der Schweiz. F\u00fcr die Ordinary Kriging Interpolationen (1 km x 1 km) wurden Messdaten von insgesamt 1'201 Standorten des Biodiversit\u00e4tsmonitorings Schweiz, der Nationalen Bodenbeobachtung und des europ\u00e4ischen geochemischen Bodenatlas ber\u00fccksichtigt. Die Element-Konzentrationen wurden in K\u00f6nigswasser Aufschl\u00fcssen (HNO\u2083:HCl:H\u2082O) von getrockneten (40\u00b0C), gesiebten (< 2 mm) und anschliessend gemahlenen Bodenproben mittels induktiv gekoppelter Plasma Massenspektrometrie analysiert. Standorte mit bekannter anthropogener \u00dcberpr\u00e4gung der Element-Konzentrationen (Punktquellen) wurden vorg\u00e4ngig ausgeschlossen. Bei den Ergebnissen des geochemischen Bodenatlas handelt es sich um eine Momentaufnahme der Element-Konzentrationen in den Oberb\u00f6den der Schweiz (Probenahmezeitraum 2011\u20132015). Die interpolierten Karten dienen der verbesserten Visualisierung von Regionen mit erh\u00f6hten resp. tiefen Konzentrationen. Es k\u00f6nnen daraus jedoch keine parzellenscharfen Informationen oder definitive R\u00fcckschl\u00fcsse auf die Geologie, die Bioverf\u00fcgbarkeit, die prozentualen Verteilung der geogenen und anthropogenen Quellen sowie die Belastung des Bodens abgeleitet werden. Zitat Publikation: J. E. Reusser, M. B. Siegenthaler, L. H. E. Winkel, D. W\u00e4chter, R. Kretzschmar, R. G. Meuli: Geochemischer Bodenatlas der Schweiz. Agroscope; Z\u00fcrich, 2023.", "formats": [{"name": "HTML"}], "keywords": ["atlante", "atlas", "bgdi-bundesgeodaten-infrastruktur", "biogeochemie", "biogeochemistry", "biogeochimica", "biogeochimie", "boden", "bodeneigenschaften", "bodenkartierung", "bund", "cartographie-des-sols", "ch", "confederation", "confederazione", "fsdi-federal-spatial-data-infrastructure", "heavy-metal", "ifdg-infrastruttura-federale-dei-dati-geografici", "ifdg-linfrastructure-federale-de-donnees-geographiques", "interpolation", "interpolazione", "mappatura-del-suolo", "metal-lourd", "metal-toxique", "metalli-tossici", "metallo-pesante", "proprieta-del-suolo", "proprietes-du-sol", "schwermetall", "soil", "soil-mapping", "soil-properties", "sol", "suolo", "toxic-metal", "toxische-metalle"], "contacts": [{"organization": "boden@bafu.admin.ch", "roles": ["creator"]}, {"organization": "https://opendata.swiss/organization/bundesamt-fur-umwelt-bafu", "roles": ["publisher"]}]}, "links": [{"href": "https://data.geo.admin.ch/browser/index.html#/collections/ch.bafu.geochemischer-bodenatlas_schweiz_thallium/items/geochemischer-bodenatlas_schweiz_thallium"}, {"href": "https://map.geo.admin.ch/?layers=ch.bafu.geochemischer-bodenatlas_schweiz_thallium"}, {"href": "https://wms.geo.admin.ch/?SERVICE=WMS&VERSION=1.3.0&REQUEST=GetCapabilities&lang=de"}, {"href": "https://wmts.geo.admin.ch/EPSG/3857/1.0.0/WMTSCapabilities.xml?lang=de"}, {"href": "https://www.agroscope.admin.ch/agroscope/de/home/themen/umwelt-ressourcen/boden-gewaesser-naehrstoffe/nabo/ergaenzende-untersuchungen/geochemischer-bodenatlas.html"}, {"href": "http://data.europa.eu/88u/dataset/02543d0a-f43a-4ab7-886a-c748d714a9e6-bundesamt-fur-umwelt-bafu"}, {"rel": "self", "type": "application/geo+json", "title": "02543d0a-f43a-4ab7-886a-c748d714a9e6-bundesamt-fur-umwelt-bafu", "name": "item", "description": "02543d0a-f43a-4ab7-886a-c748d714a9e6-bundesamt-fur-umwelt-bafu", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/02543d0a-f43a-4ab7-886a-c748d714a9e6-bundesamt-fur-umwelt-bafu"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"null": "date"}}, {"id": "02de5058-3b3b-421f-a1fc-31e3885fadad-bundesamt-fur-umwelt-bafu", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:13:54Z", "type": "Dataset", "title": "Geochemical soil atlas of Switzerland: Uranium", "description": "Interpolated uranium concentrations (mg/kg fine earth) in the upper soils (0-20 cm) of Switzerland. For the Ordinary Kriging Interpolations (1 km x 1 km), measurement data from a total of 1,201 sites of the Swiss Biodiversity Monitoring System, the National Soil Observation System and the European Soil Geochemical Atlas were taken into account. Element concentrations were analyzed in aqua regia outcrop (HNO3:HCl:H2O) from dried (40\u00b0C), sieved (< 2 mm) and subsequently ground soil samples using inductively coupled plasma mass spectrometry. Sites with known anthropogenic over-embossing of element concentrations (point sources) were excluded in advance. The results of the soil geochemical atlas are a snapshot of the element concentrations in the topsoils of Switzerland (sampling period 2011-2015). The interpolated maps serve to improve the visualization of regions with elevated or low concentrations. However, no parcel-sharp information or definitive conclusions on the geology, bioavailability, the percentage distribution of geogenous and anthropogenic sources as well as the load on the soil can be derived from this. Quotation of Publication: J. E. Reusser, M. B. Siegenthaler, L. H. E. Winkel, D. W\u00e4chter, R. Kretzschmar, R. G. Meuli: Geochemical soil atlas of Switzerland. Agroscope, Zurich, 2023.", "formats": [{"name": "HTML"}], "keywords": ["atlante", "atlas", "bgdi-bundesgeodaten-infrastruktur", "biogeochemie", "biogeochemistry", "biogeochimica", "biogeochimie", "boden", "bodeneigenschaften", "bodenkartierung", "bund", "carico-da-metalli-pesanti", "cartographie-des-sols", "ch", "charge-en-metaux-lourds", "confederation", "confederazione", "fsdi-federal-spatial-data-infrastructure", "heavy-metal-load", "ifdg-infrastruttura-federale-dei-dati-geografici", "ifdg-linfrastructure-federale-de-donnees-geographiques", "interpolation", "interpolazione", "mappatura-del-suolo", "metal-toxique", "metalli-tossici", "proprieta-del-suolo", "proprietes-du-sol", "schwermetallbelastung", "soil", "soil-mapping", "soil-properties", "sol", "suolo", "toxic-metal", "toxische-metalle"], "contacts": [{"organization": "boden@bafu.admin.ch", "roles": ["creator"]}, {"organization": "https://opendata.swiss/organization/bundesamt-fur-umwelt-bafu", "roles": ["publisher"]}]}, "links": [{"href": "https://data.geo.admin.ch/browser/index.html#/collections/ch.bafu.geochemischer-bodenatlas_schweiz_uran/items/geochemischer-bodenatlas_schweiz_uran"}, {"href": "https://map.geo.admin.ch/?layers=ch.bafu.geochemischer-bodenatlas_schweiz_uran"}, {"href": "https://wms.geo.admin.ch/?SERVICE=WMS&VERSION=1.3.0&REQUEST=GetCapabilities&lang=de"}, {"href": "https://wmts.geo.admin.ch/EPSG/3857/1.0.0/WMTSCapabilities.xml?lang=de"}, {"href": "https://www.agroscope.admin.ch/agroscope/de/home/themen/umwelt-ressourcen/boden-gewaesser-naehrstoffe/nabo/ergaenzende-untersuchungen/geochemischer-bodenatlas.html"}, {"href": "http://data.europa.eu/88u/dataset/02de5058-3b3b-421f-a1fc-31e3885fadad-bundesamt-fur-umwelt-bafu"}, {"rel": "self", "type": "application/geo+json", "title": "02de5058-3b3b-421f-a1fc-31e3885fadad-bundesamt-fur-umwelt-bafu", "name": "item", "description": "02de5058-3b3b-421f-a1fc-31e3885fadad-bundesamt-fur-umwelt-bafu", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/02de5058-3b3b-421f-a1fc-31e3885fadad-bundesamt-fur-umwelt-bafu"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"null": "date"}}, {"id": "10.1002/ecs2.4754", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:14:04Z", "type": "Journal Article", "created": "2024-01-15", "title": "Invasions eliminate the legacy effects of substrate history on microbial nitrogen cycling", "description": "Abstract<p>Changes in substrate quality driven by climate, land use, or other forms of global change may represent a strong selective force on microbial communities. Invasion of new taxa into a community through dispersal, evolution, or recolonization could impact the outcome of this environmental selection. Here, we simulated substrate change with a trait\uffe2\uff80\uff90based model of microbial litter decomposition (DEMENTpy) to assess the legacy effects of past substrate quality and the impact of selection by a new substrate on community decomposition activity. Simulations were run with different levels of invasion, including invasion from communities long\uffe2\uff80\uff90adapted to the new substrate. Legacy effects were evident with substrate change for native communities differing in composition. Protein was the only substrate that exerted a strong enough selective force to affect community composition. Legacy effects disappeared when invaders came from substrates similar to the new substrate. Together, our simulations demonstrate that substrate quality changes associated with global change can lead to legacy effects on substrate degradation. In decomposing plant litter, such legacy effects can occur if substrate inputs shift to higher protein content and if invasion is low.</p", "keywords": ["0301 basic medicine", "0303 health sciences", "Ecology", "Life on Land", "Biological Sciences", "15. Life on land", "invasion", "Ecological applications", "soil ecology", "[SDV] Life Sciences [q-bio]", "03 medical and health sciences", "nitrogen cycling", "biogeochemistry", "biogeochemistry environmental microbiology global change invasion legacy effect nitrogen cycling soil ecology", "13. Climate action", "Ecological Applications", "environmental microbiology", "legacy effect", "Zoology", "global change"]}, "links": [{"href": "https://esajournals.onlinelibrary.wiley.com/doi/pdf/10.1002/ecs2.4754"}, {"href": "https://doi.org/10.1002/ecs2.4754"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecosphere", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ecs2.4754", "name": "item", "description": "10.1002/ecs2.4754", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ecs2.4754"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2022.116217", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:16:11Z", "type": "Journal Article", "created": "2022-10-23", "title": "Iron speciation changes and mobilization of colloids during redox cycling in Fe-rich, Icelandic peat soils", "description": "Open AccessISSN:0016-7061", "keywords": ["13. Climate action", "Wetlands", "Iceland", "0401 agriculture", " forestry", " and fisheries", "Colloids", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "Iron biogeochemistry", "Organic carbon", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2022.116217"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2022.116217", "name": "item", "description": "10.1016/j.geoderma.2022.116217", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2022.116217"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-12-01T00:00:00Z"}}, {"id": "10.1007/s10021-006-9010-y", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-04-16T16:14:34Z", "type": "Journal Article", "created": "2007-04-18", "title": "Land-Use Intensity Effects On Soil Organic Carbon Accumulation Rates And Mechanisms", "description": "Restoring soil C pools by reducing land use intensity is a potentially high impact, rapidly deployable strategy for partially offsetting atmospheric CO2 increases. However, rates of C accumulation and underlying mechanisms have rarely been determined for a range of managed and successional ecosystems on the same soil type. We determined soil organic matter (SOM) fractions with the highest potential for sequestering C in ten ecosystems on the same soil series using both density- and incubation-based fractionation methods. Ecosystems included four annual row-crop systems (conventional, low input,  organic and no-till), two perennial cropping systems (alfalfa and poplar), and four native ecosystems (early successional, midsuccessional historically tilled, midsuccessional never-tilled, and late successional forest). Enhanced C storage to 5\u00a0cm relative to conventional agriculture ranged from 8.9\u00a0g\u00a0C\u00a0m\u22122\u00a0y\u22121 in low input row crops to 31.6\u00a0g\u00a0C\u00a0m\u22122\u00a0y\u22121 in the early successional ecosystem. Carbon sequestration across all ecosystems occurred in aggregate-associated pools larger than 53\u00a0\u03bcm. The density-based fractionation scheme identified heavy-fraction C pools (SOM\u00a0>\u00a01.6\u00a0g\u00a0cm\u22123 plus SOM\u00a0 250\u00a0\u03bcm), as having the highest potential C accumulation rates, ranging from 8.79 g\u00a0C\u00a0m\u22122\u00a0y\u22121 in low input row crops to 29.22\u00a0g\u00a0C\u00a0m\u22122\u00a0y\u22121 in the alfalfa ecosystem. Intra-aggregate light fraction pools accumulated C at slower rates, but generally faster than in inter-aggregate LF pools. Incubation-based methods that fractionated soil into active, slow and passive pools showed that C accumulated primarily in slow and resistant pools. However, crushing aggregates in a manner that simulates tillage resulted in a substantial transfer of C from slow pools with field mean residence times of decades to active pools with mean residence times of only weeks. Our results demonstrate that soil C accumulates almost entirely in soil aggregates, mostly in macroaggregates, following reductions in land use intensity. The potentially rapid destruction of macroaggregates following tillage, however, raises concerns about the long-term persistence of these C pools.", "keywords": ["2. Zero hunger", "forest C", "13. Climate action", "organic", "aggregates", "tillage", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "C-sequestration", "agriculture", "succession"]}, "links": [{"href": "https://doi.org/10.1007/s10021-006-9010-y"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecosystems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10021-006-9010-y", "name": "item", "description": "10.1007/s10021-006-9010-y", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10021-006-9010-y"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2007-02-01T00:00:00Z"}}, {"id": "10.1007/s10021-009-9252-6", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:14:34Z", "type": "Journal Article", "created": "2009-05-04", "title": "Sheep Grazing Decreases Organic Carbon And Nitrogen Pools In The Patagonian Steppe: Combination Of Direct And Indirect Effects", "description": "We explored the net effects of grazing on soil C and N pools in a Patagonian shrub\u2013grass steppe (temperate South America). Net effects result from the combination of direct impacts of grazing on biogeochemical characteristics of microsites with indirect effects on relative cover of vegetated and unvegetated microsites. Within five independent areas, we sampled surface soils in sites subjected to three grazing intensities: (1) ungrazed sites inside grazing exclosures, (2) moderately grazed sites adjacent to them, and (3) intensely grazed sites within the same paddock. Grazing significantly reduced soil C and N pools, although this pattern was clearest in intensely grazed sites. This net effect was due to the combination of a direct reduction of soil N content in bare soil patches, and indirect effects mediated by the increase of the cover of bare soil microsites, with lower C and N content than either grass or shrub microsites. This increase in bare soil cover was accompanied by a reduction in cover of preferred grass species and standing dead material. Finally, stable isotope signatures varied significantly among grazed and ungrazed sites, with \u03b415N and \u03b413C significantly depleted in intensely grazed sites, suggesting reduced mineralization with increased grazing intensity. In the Patagonian steppe, grazing appears to exert a negative effect on soil C and N cycles; sound management practices must incorporate the importance of species shifts within life form, and the critical role of standing dead material in maintaining soil C and N stocks and biogeochemical processes.", "keywords": ["0106 biological sciences", "2. Zero hunger", "ARGENTINA", "SEMIARID ECOSYSTEMS", "STABLE ISOTOPES", "DESERTIFICATION", "\u039413C", "SHRUB-GRASS STEPPE", "04 agricultural and veterinary sciences", "15. Life on land", "BIOGEOCHEMISTRY", "&Delta;13C", "01 natural sciences", "LIFE FORMS", "https://purl.org/becyt/ford/4.5", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "https://purl.org/becyt/ford/4", "\u03b415N"]}, "links": [{"href": "https://doi.org/10.1007/s10021-009-9252-6"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecosystems", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10021-009-9252-6", "name": "item", "description": "10.1007/s10021-009-9252-6", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10021-009-9252-6"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-05-05T00:00:00Z"}}, {"id": "10.1007/s10533-018-0448-8", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:14:43Z", "type": "Journal Article", "created": "2018-05-05", "title": "The biogeochemical consequences of litter transformation by insect herbivory in the Subarctic: a microcosm simulation experiment", "description": "Warming may increase the extent and intensity of insect defoliations within Arctic ecosystems. A thorough understanding of the implications of this for litter decomposition is essential to make predictions of soil-atmosphere carbon (C) feedbacks. Soil nitrogen (N) and C cycles naturally are interlinked, but we lack a detailed understanding of how insect herbivores impact these cycles. In a laboratory microcosm study, we investigated the growth responses of heterotrophic soil fungi and bacteria as well as C and N mineralisation to simulated defoliator outbreaks (frass addition), long-term increased insect herbivory (litter addition at higher background N-level) and non-outbreak conditions (litter addition only) in soils from a Subarctic birch forest. Larger amounts of the added organic matter were mineralised in the outbreak simulations compared to a normal year; yet, the fungal and bacterial growth rates and biomass were not significantly different. In the simulation of long-term increased herbivory, less litter C was respired per unit mineralised N (C:N of mineralisation decreased to 20\u2009\u00b1\u20091 from 38\u2009\u00b1\u20093 for pure litter), which suggests a directed microbial mining for N-rich substrates. This was accompanied by higher fungal dominance relative to bacteria and lower total microbial biomass. In conclusion, while a higher fraction of foliar C will be respired by insects and microbes during outbreak years, predicted long-term increases in herbivory linked to climate change may facilitate soil C-accumulation, as less foliar C is respired per unit mineralised N. Further work elucidating animal-plant-soil interactions is needed to improve model predictions of C-sink capacity in high latitude forest ecosystems.", "keywords": ["Ekologi", "0106 biological sciences", "Ecology", "herbivory", "Subarctic birch forest", "nitrogen mineralisation", "04 agricultural and veterinary sciences", "15. Life on land", "soil respiration", "soil microbial ecology", "01 natural sciences", "biogeochemistry", "13. Climate action", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "http://link.springer.com/content/pdf/10.1007/s10533-018-0448-8.pdf"}, {"href": "https://doi.org/10.1007/s10533-018-0448-8"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biogeochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10533-018-0448-8", "name": "item", "description": "10.1007/s10533-018-0448-8", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10533-018-0448-8"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-05-01T00:00:00Z"}}, {"id": "10.1007/s10533-008-9257-9", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:14:42Z", "type": "Journal Article", "created": "2008-11-11", "title": "Nitrogen Deposition Effects On Soil Organic Matter Chemistry Are Linked To Variation In Enzymes, Ecosystems And Size Fractions", "description": "Recent research has dramatically advanced our understanding of soil organic matter chemistry and the role of N in some organic matter transformations, but the effects of N deposition on soil C dynamics remain difficult to anticipate. We examined soil organic matter chemistry and enzyme kinetics in three size fractions (>250 \u03bcm, 63\u2013250 \u03bcm, and  250 \u03bcm fraction of the sugar maple\u2013basswood ecosystem from 0.9 to 3.3 but there were no changes in other size classes or in the black oak\u2013white oak ecosystem. Third, simulated N deposition increased the ratio of lignin derivatives to N-bearing compounds in the 63\u2013250 and >250 \u03bcm fractions in both ecosystems but not in the  63 \u03bcm) where there were multiple correlations between oxidative enzyme activities and concentrations of lignin derivatives and between glycanolytic enzyme activities and concentrations of carbohydrates. Within silt-clay fractions (<63 \u03bcm), these enzyme-substrate correlations were attenuated by interactions with particle surfaces. Our results demonstrate that variation in enzyme activity resulting from atmospheric N deposition is directly linked to changes in soil organic matter chemistry, particularly those that occur within coarse soil size fractions.", "keywords": ["Carbon structure", "Soil organic matter", "13. Climate action", "Pyrolysis gas chromatography/mass spectrometry", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "Nitrogen deposition", "Enzymes"]}, "links": [{"href": "https://doi.org/10.1007/s10533-008-9257-9"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biogeochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10533-008-9257-9", "name": "item", "description": "10.1007/s10533-008-9257-9", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10533-008-9257-9"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-10-01T00:00:00Z"}}, {"id": "10.1007/s10533-014-9952-7", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:14:42Z", "type": "Journal Article", "created": "2014-01-19", "title": "Increased Inorganic Nitrogen Leaching From A Mountain Grassland Ecosystem Following Grazing Removal: A Hangover Of Past Intensive Land-Use?", "description": "Heathlands and grasslands occur in montane regions, naturally or due to anthropogenic land-use. These are typically nutrient-poor but exposure to elevated nitrogen deposition and intensive livestock grazing causes large-scale ecological change. We studied the long-term implications of grazing removal on soil and drainage water biogeochemistry and the implications for nitrogen cycling in 50-year replicated grazing exclosures on a montane grassland exposed to high rates of ambient nitrogen deposition. Evidence of \u2018ecosystem recovery\u2019 represented by successional change from graminoid to shrub-dominance after cessation of grazing was not reflected in the soil biogeochemistry. Cessation of grazing had a negative impact, with increased soil extractable and soil solution nitrate concentrations; an apparent shift towards a more nitrogen-rich, bacterially dominated microbial community; and the acidification of soils and leachate. The increase in nitrate leaching appears to have been counterbalanced by a decrease in dissolved organic nitrogen leaching, approximately maintaining the overall nitrogen balance of the system, whilst apparently altering ecosystem functioning. High rates of organic matter cycling and inorganic nitrogen uptake in grazed grassland may have sustained ecosystem N limitation under elevated nitrogen deposition. Grazing removal caused long-term over-supply of nitrogen from mineralisation of enriched organic matter, exacerbated by continued high nitrogen deposition, exceeding the uptake demand of heath vegetation and resulting in nitrification and nitrate leaching. This disequilibrium between vegetation and soil following grazing removal has implications for restoration after periods of intensive grazing. Grazing may not simply leave a legacy of nutrient enrichment but its cessation may trigger nitrogen saturation and soil and freshwater eutrophication and acidification which counteract the immediate benefits of natural vegetation recovery. Long term, nitrogen saturation of abandoned grasslands is likely to reduce ecosystem resilience to invasion by nitrophilous species, pathogen attack and vulnerability to environmental pressures such as climate change. We conclude that partial and/or phased reduction in grazing levels may permit the more synchronised recovery of soils and vegetation, thereby avoiding imbalances between nitrogen supply and nitrogen demand and detrimental ecological effects.", "keywords": ["2. Zero hunger", "soil biogeochemistry", "13. Climate action", "nitrogen saturation", "ecosystem resilience", "land use", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "environmental pollution", "extensive sheep production", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1007/s10533-014-9952-7"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Biogeochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1007/s10533-014-9952-7", "name": "item", "description": "10.1007/s10533-014-9952-7", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1007/s10533-014-9952-7"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-01-20T00:00:00Z"}}, {"id": "10.1016/j.funeco.2016.05.011", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:16:05Z", "type": "Journal Article", "created": "2016-06-26", "title": "Chronic Nitrogen Additions Fundamentally Restructure The Soil Fungal Community In A Temperate Forest", "description": "Abstract   Fungi dominate the microbial biomass of temperate forest soils and are a key driver of ecosystem nutrient cycling. Chronic nitrogen (N) amendments frequently cause the accumulation of soil organic matter within soils, suggesting that elevated N disrupts decomposition by altering fungal communities. To link previously observed increases in soil organic matter with potential changes in the fungal community, we assessed the effects of soil N amendment on fungal community structure at a long-term N addition experiment at Harvard Forest (Petersham, MA, USA). A decline in the relative abundance of ectomycorrhizal fungi following long-term N addition was offset by an increase in the relative abundance of saprotrophs. Species richness and diversity of ectomycorrhizal fungi declined, while ascomycetes and saprotrophs responded positively to N enrichment. However, nitrophilic species included ectomycorrhizal as well as saprotrophic fungi, especially the ectomycorrhizal Russula vinacea, whose relative abundance increased from 10 to 37% of the entire community across N treatments. Two decades of soil N enrichment appears to have fundamentally altered the soil fungal community of this temperate forest.", "keywords": ["Basidiomycetes", "0106 biological sciences", "2. Zero hunger", "Diversity", "Community", "Soil fungi", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "Nitrogen deposition", "01 natural sciences", "Ascomycetes", "0401 agriculture", " forestry", " and fisheries", "DNA barcoding"]}, "links": [{"href": "https://doi.org/10.1016/j.funeco.2016.05.011"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Fungal%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.funeco.2016.05.011", "name": "item", "description": "10.1016/j.funeco.2016.05.011", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.funeco.2016.05.011"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-10-01T00:00:00Z"}}, {"id": "10.1016/j.isci.2024.109042", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:16:14Z", "type": "Journal Article", "created": "2024-01-26", "title": "Global N2O emissions from our planet: Which fluxes are affected by man, and can we reduce these?", "description": "In some places, N2O emissions have doubled during the last 2-3 decades. Therefore, it is crucial to identify N2O emission hotspots from terrestrial and aquatic systems. Large variation in N2O emissions occur in managed as well as in natural areas. Natural unmanaged tropical and subtropical wet forests are important N2O sources globally. Emission hotspots, often coupled to human activities, vary across climate zones, whereas N2O emissions are most often a few kg N ha-1 year-1 from arable soils, drained organic soils in the boreal and temperate zones often release 20-30\u00a0kg N ha-1 year-1. Similar high N2O emissions occur from some tropical crops like tea, palm oil and bamboo. This strong link between increased N2O emissions and human activities highlight the potential to mitigate large emissions. In contrast, water where oxic and anoxic conditions meet are N2O emission hotspots as well, but not possible to reduce.", "keywords": ["13. Climate action", "Science", "Q", "11. Sustainability", "Environmental geochemistry", "Review", "Biogeochemistry", "15. Life on land", "Microbiology", "7. Clean energy", "6. Clean water"], "contacts": [{"organization": "Christensen, S\u00f8ren, Rousk, Kathrin,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.isci.2024.109042"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/iScience", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.isci.2024.109042", "name": "item", "description": "10.1016/j.isci.2024.109042", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.isci.2024.109042"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-02-01T00:00:00Z"}}, {"id": "10.1016/j.jhydrol.2021.126014", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:16:21Z", "type": "Journal Article", "created": "2021-01-28", "title": "Future changes in the Dominant Source Layer of riparian lateral water fluxes in a subhumid Mediterranean catchment", "description": "The \u2018Dominant Source Layer\u2019 (DSL) is defined as the riparian zone (RZ) depth stratum that contributes the most to water and solute fluxes to streams. The concept can be used to explain timing and amount of matter transferred from RZs to streams in forest headwaters. Here, we investigated the potential impact of future climate changes on the long-term position of the DSL in a subhumid Mediterranean headwater catchment. We used the rainfall-runoff model PERSiST to simulate reference (1981\u20132000) and future (2081\u20132100) stream runoff. The latter were simulated using synthetic temperature, precipitation, and inter-event length scenarios in order to simulate possible effects of changes in temperature, rainfall amount, and rainfall event frequency and intensity. Simulated stream runoff was then used to estimate RZ groundwater tables and the proportion of lateral water flux at every depth in the riparian profile; and hence the DSL. Our simulations indicated that future changes in temperature and precipitation will have a similar impact on the long-term DSL position. Nearly all scenarios projected that, together with reductions in stream runoff and water exports, the DSL will move down in the future, by as much as ca. 30 cm. Shallow organic-rich layers in the RZ will only be hydrologically activated during sporadic, large rainfall episodes predicted for the most extreme inter-event length scenarios. Consequently, terrestrial organic matter inputs to streams will decrease, likely reducing catchment organic matter exports and stream dissolved organic carbon concentrations. This study highlights the importance of identifying vertical, hydrologically active layers in the RZ for a better understanding of the potential impact of future climate on lateral water transfer and their relationship with surface water quality and carbon cycling.", "keywords": ["Terrestrial\u2013aquatic interface", "550", "Geography & travel", "Physics", "Catchment biogeochemistry", "0207 environmental engineering", "Oceanography", " Hydrology", " Water Resources", "02 engineering and technology", "910", "15. Life on land", "Oceanography", "ddc:910", "Hydrological connectivity", "Environmental change", "01 natural sciences", "6. Clean water", "13. Climate action", "Environmental changes", "Water Resources", "Hydrological modelling", "info:eu-repo/classification/ddc/910", "Hydrology", "Mediterranean climate", "Biology", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://pub.epsilon.slu.se/24383/1/ledesma_j_l_j_et_al_210603.pdf"}, {"href": "https://doi.org/10.1016/j.jhydrol.2021.126014"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Hydrology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jhydrol.2021.126014", "name": "item", "description": "10.1016/j.jhydrol.2021.126014", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jhydrol.2021.126014"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2008.11.046", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:16:29Z", "type": "Journal Article", "created": "2008-12-20", "title": "How Nitrogen And Sulphur Addition, And A Single Drought Event Affect Root Phosphatase Activity In Phalaris Arundinacea", "description": "Conservation and restoration of fens and fen meadows often aim to reduce soil nutrients, mainly nitrogen (N) and phosphorus (P). The biogeochemistry of P has received much attention as P-enrichment is expected to negatively impact on species diversity in wetlands. It is known that N, sulphur (S) and hydrological conditions affect the biogeochemistry of P, yet their interactive effects on P-dynamics are largely unknown. Additionally, in Europe, climate change has been predicted to lead to increases in summer drought. We performed a greenhouse experiment to elucidate the interactive effects of N, S and a single drought event on the P-availability for Phalaris arundinacea. Additionally, the response of plant phosphatase activity to these factors was measured over the two year experimental period. In contrast to results from earlier experiments, our treatments hardly affected soil P-availability. This may be explained by the higher pH in our soils, hampering the formation of Fe-P or Fe-Al complexes. Addition of S, however, decreased the plants N:P ratio, indicating an effect of S on the N:P stoichiometry and an effect on the plant's P-demand. Phosphatase activity increased significantly after addition of S, but was not affected by the addition of N or a single drought event. Root phosphatase activity was also positively related to plant tissue N and P concentrations, plant N and P uptake, and plant aboveground biomass, suggesting that the phosphatase enzyme influences P-biogeochemistry. Our results demonstrated that it is difficult to predict the effects of wetland restoration, since the involved mechanisms are not fully understood. Short-term and long-term effects on root phosphatase activity may differ considerably. Additionally, the addition of S can lead to unexpected effects on the biogeochemistry of P. Our results showed that natural resource managers should be careful when restoring degraded fens or preventing desiccation of fen ecosystems.", "keywords": ["summer", "0106 biological sciences", "plant tissue", "550", "Sulphate induced enzyme activity", "phosphorus limitation", "plant", "sulfate", "drought", "deposition", "Plant Roots", "01 natural sciences", "nitrogen", "iron", "biogeochemistry", "Root-surface phosphatase", "SDG 13 - Climate Action", "Phalaris", "species richness", "phosphorus", "N:P stoichiometry", "manager", "Plant Proteins", "2. Zero hunger", "pH", "grasslands", "Phosphorus", "dynamics", "04 agricultural and veterinary sciences", "wetland", "6. Clean water", "enzyme activity", "stoichiometry", "Europe", "eutrophication", "climate change", "Nitrogen", "growth", "fresh-water wetlands", "phosphatase", "soil", "desiccation", "Stress", " Physiological", "N:P ratios", "greenhouse", "N:P rations", "Fertilizers", "580", "Phosphorus uptake", "ecosystem", "biomass", "species diversity", "carbon", "nutrient", "15. Life on land", "Phosphoric Monoester Hydrolases", "enzyme", "fertilization", "13. Climate action", "Wetlands", "sulfur", "0401 agriculture", " forestry", " and fisheries", "Sulfur"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2008.11.046"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2008.11.046", "name": "item", "description": "10.1016/j.scitotenv.2008.11.046", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2008.11.046"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-03-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2012.12.017", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:16:42Z", "type": "Journal Article", "created": "2013-01-22", "title": "Bacterial Growth And Growth-Limiting Nutrients Following Chronic Nitrogen Additions To A Hardwood Forest Soil", "description": "Increasing nitrogen(N) deposition due to anthropogenic activities has become a significant global change threat to N-poor terrestrial ecosystems. We compared bacterial growth and nutrients limiting bacterial growth in one of the longest running experiments on increasing N-deposition to a temperate forest, the Chronic Nitrogen Amendment Study at Harvard Forest, USA. Soil samples were collected in fall 2009 from the organic and mineral horizons of plots treated annually since 1988 with 0 (unfertilized), 50(low N) or 150 (high N) kg N ha(-1) as NH4NO3. In the organic horizon, bacterial growth (leucine incorporation) decreased by 5 times in the high N plots compared to the unfertilized treatment, while no decrease was observed in the mineral horizon. Bacterial growth in all soils was primarily limited by lack of carbon (C), although adding only C (as glucose) resulted in only a minor increase in bacterial growth in the unfertilized soil compared to adding C in combination with N. The bacterial growth induced by adding only C increased with higher level of N fertilization, up to 7-8 times the level without any C addition in the high N treatment, suggesting increased availability of N for the bacteria with increasing N addition. (C) 2013 Elsevier Ltd. All rights reserved. (Less)", "keywords": ["N availability", "2. Zero hunger", "0106 biological sciences", "Bacterial growth", "Leucine incorporation", "Limiting factors", "0401 agriculture", " forestry", " and fisheries", "N-deposition", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "01 natural sciences"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2012.12.017"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2012.12.017", "name": "item", "description": "10.1016/j.soilbio.2012.12.017", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2012.12.017"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-04-01T00:00:00Z"}}, {"id": "10.1016/j.soilbio.2016.08.024", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:16:45Z", "type": "Journal Article", "created": "2016-08-28", "title": "Soil Microbial Community Resistance To Drought And Links To C Stabilization In An Australian Grassland", "description": "Abstract   Drought is predicted to increase in many areas of the world, which can greatly influence soil microbial community structure and C stabilization. Increasing soil carbon (C) stabilization is an important strategy to mitigate climate change effects, but the underlying processes promoting C stabilization are still unclear. Microbes are an important contributor of C stabilization through the adsorption of microbial-derived compounds on organo-mineral complexes. Management practices, such as addition of organic amendments might increase soil C stock and mitigate drought impacts, especially in agro-ecosystems where large losses of C have been reported.  Here, we conducted a drought experiment where we tested whether the addition of organic amendments mitigates drought effects on soil C stabilization and its links to microbial community changes. In a semi-natural grassland system of eastern Australia, we combined a management treatment (compost vs. inorganic fertilizer addition) and a drought treatment using rainout shelters (half vs. ambient precipitation). We measured soil moisture, soil nitrogen and phosphorus, particulate organic C (Pom-C) and organo-mineral C (Min-C). Microbial community composition and biomass were assessed with PLFA analyses. A structural equation modeling (SEM) approach was used to examine the controls of soil moisture, Pom-C and nutrients on soil microbial biomass and community structure and changes in Min-C.  Overall, the drought treatment did not affect microbial community structure and Min-C, while fertilizer only marginally increased Min-C, highlighting the resistance to these treatments in this grassland soil. In the surface soil (0\u20135\u00a0cm) Min-C was strongly associated with fungi that may have been stimulated by root exudates, and by gram-negative bacteria in the deep soil (5\u201315\u00a0cm) that were more affected by Pom-C and soil moisture. .  We conclude that the grassland microbial community and its effect on Min-C at our field-site were non-responsive to our drought treatment, but sensitive to variability in soil moisture and microbial community structure. Our findings also show that surface compost application can moderately increase soil C stabilization under drought, representing a useful tool for improving soil C stability.", "keywords": ["2. Zero hunger", "550", "grassland ecology", "droughts", "carbon", "grasslands", "Australia", "04 agricultural and veterinary sciences", "Soil biogeochemistry; Ecology", "15. Life on land", "soil microbiology", "6. Clean water", "13. Climate action", "XXXXXX - Unknown", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "https://doi.org/10.1016/j.soilbio.2016.08.024"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.soilbio.2016.08.024", "name": "item", "description": "10.1016/j.soilbio.2016.08.024", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.soilbio.2016.08.024"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-12-01T00:00:00Z"}}, {"id": "10.1016/j.still.2013.02.008", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:16:55Z", "type": "Journal Article", "created": "2013-03-19", "title": "Cover Crops And No-Till Effects On Physical Fractions Of Soil Organic Matter", "description": "Brazilian Agricultural Research Corporation (EMBRAPA) Rice and Beans Research Center, Santo Antonio de Goias, GO", "keywords": ["land use change", "Soil management", "Aggregates", "Millet", "fallow", "grass", "Cultivation", "Soil pollution", "soil depth", "Crops", "cover crop", "Plants (botany)", "soil organic matter", "Organic compounds", "soil quality", "zero tillage", "Agricultural machinery", "soil aggregate", "Panicum maximum", "2. Zero hunger", "soil surface", "rice", "Brachiaria brizantha", "Biological materials", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "sustainability", "Agronomy", "Brachiaria ruziziensis", "13. Climate action", "Soils", "conservation tillage", "0401 agriculture", " forestry", " and fisheries", "total organic carbon", "plowing"]}, "links": [{"href": "https://doi.org/10.1016/j.still.2013.02.008"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20and%20Tillage%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.still.2013.02.008", "name": "item", "description": "10.1016/j.still.2013.02.008", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.still.2013.02.008"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-06-01T00:00:00Z"}}, {"id": "10.5281/zenodo.15328215", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:22:29Z", "type": "Dataset", "title": "1000 Soils Pilot Dataset, version 8, May 2025", "description": "This record hosts data generated by the 1000 Soils Pilot. Data will be updated as more become available. Please see the most recent data upload for current data.  A beta visualization tool is available for some data types at\u00a0https://shinyproxy.emsl.pnnl.gov/app/1000soils. Please submit any suggestions or comments through the 'contact' tab. We are actively working to improve visualizations and value all feedback.  Data completed include:    Geochemistry, texture, respiration, and enzyme activities  FTICR-MS organic matter chemistry  Microbial biomass C and N  TOC/TDN of water-extractable OM  X-ray computed tomography (derived metrics available here, raw data available upon request)  Metagenomes; a variety of data formats are available upon request  Soil hydraulic properties   Data in progress:    LC-MS/MS in development, timeline TBD, inquire for status   1000S_processed_BGC_summary.csv contains all available biogeochemical data; microbial biomass C and N; and TOC/TDN of water-extractable OM; and\u00a0  1000S_Tomography.xslx contains a summary of data generated via X-ray computed tomography.  icr_v2_corems2.csv contains FTICR-MS data processed by CoreMS version 2. These data are merged by formula across instrument runs to enable cross-sample comparisons. Technical replicates are merged by retaining peaks present in 2 out of 3 replicates.  1000Soils_Metadata_Site_Mastersheet_v1.csv contains site information.  Soil Hydraulics_corrected_02042025.xlsx contains soil hydraulics information.  Readme File_v4.xlsx is the readme file.  Please contact the MONet project (monet.emsl@pnnl.gov) or Emily Graham (emily.graham@pnnl.gov) with questions.  The following file and all raw data are\u00a0available upon request:  icr_by_mass_for_single_sample_analysis_only.csv\u00a0contains FTICR-MS data processed by CoreMS and is intended for usage in the calculation of biochemical transformations within samples only. These data are not acceptable for cross-sample comparison of masses because they are from multiple instrument runs.  For more information, please see: https://www.emsl.pnnl.gov/monet and https://sc-data.emsl.pnnl.gov/monet  Acknowledgment:\u00a0  Soil data were provided by the Molecular Observation Network (MONet) at the Environmental Molecular Sciences Laboratory (https://ror.org/04rc0xn13), a DOE Office of Science user facility sponsored by the Biological and Environmental Research program under Contract No. DE-AC05-76RL01830. The work (proposal: 10.46936/10.25585/60008970) conducted by the U.S. Department of Energy, Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science user facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.\u00a0  The Molecular Observation Network (MONet) database is an open, FAIR, and publicly available compilation of the molecular and microstructural properties of soil. Data in the MONet open science database can be found at\u00a0https://sc-data.emsl.pnnl.gov/.", "keywords": ["2. Zero hunger", "decomposition", "13. Climate action", "FTICR-MS", "biogeochemistry", "carbon", "molecular", "15. Life on land", "6. Clean water", "soil"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15328215"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15328215", "name": "item", "description": "10.5281/zenodo.15328215", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15328215"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-02T00:00:00Z"}}, {"id": "10.1021/acs.est.1c04605", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:05Z", "type": "Journal Article", "created": "2021-12-02", "title": "Exploring Spatially Explicit Changes in Carbon Budgets of Global River Basins during the 20th Century", "description": "Rivers play an important role in the global carbon (C) cycle. However, it remains unknown how long-term river C fluxes change because of climate, land-use, and other environmental changes. Here, we investigated the spatiotemporal variations in global freshwater C cycling in the 20th century using the mechanistic IMAGE-Dynamic Global Nutrient Model extended with the Dynamic In-Stream Chemistry Carbon module (DISC-CARBON) that couples river basin hydrology, environmental conditions, and C delivery with C flows from headwaters to mouths. The results show heterogeneous spatial distribution of dissolved inorganic carbon (DIC) concentrations in global inland waters with the lowest concentrations in the tropics and highest concentrations in the Arctic and semiarid and arid regions. Dissolved organic carbon (DOC) concentrations are less than 10 mg C/L in most global inland waters and are generally high in high-latitude basins. Increasing global C inputs, burial, and CO2 emissions reported in the literature are confirmed by DISC-CARBON. Global river C export to oceans has been stable around 0.9 Pg yr-1. The long-term changes and spatial patterns of concentrations and fluxes of different C forms in the global river network unfold the combined influence of the lithology, climate, and hydrology of river basins, terrestrial and biological C sources, in-stream C transformations, and human interferences such as damming.", "keywords": ["global budget", "Arctic Regions", "Fresh Water", "General Chemistry", "15. Life on land", "carbon biogeochemistry", "Dissolved Organic Matter", "01 natural sciences", "river fluxes", "6. Clean water", "process-based hydrology-biogeochemistry model", "Rivers", "13. Climate action", "SDG 13 - Climate Action", "Environmental Chemistry", "Humans", "SDG 14 - Life Below Water", "14. Life underwater", "Hydrology", "spatiotemporal variations", "SDG 15 - Life on Land", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://pubs.acs.org/doi/pdf/10.1021/acs.est.1c04605"}, {"href": "https://doi.org/10.1021/acs.est.1c04605"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Environmental%20Science%20%26amp%3B%20Technology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1021/acs.est.1c04605", "name": "item", "description": "10.1021/acs.est.1c04605", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1021/acs.est.1c04605"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-12-02T00:00:00Z"}}, {"id": "10.1029/2023jg007674", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:19Z", "type": "Journal Article", "created": "2024-06-05", "title": "Feasibility of Formulating Ecosystem Biogeochemical Models From Established Physical Rules", "description": "Abstract<p>To improve the predictive capability of ecosystem biogeochemical models (EBMs), we discuss the feasibility of formulating biogeochemical processes using physical rules that have underpinned the many successes in computational physics and chemistry. We argue that the currently popular empirically based approaches, such as multiplicative empirical response functions and the law of the minimum, will not lead to EBM formulations that can be continuously refined to incorporate improved mechanistic understanding and empirical observations of biogeochemical processes. Instead, we propose that EBM parameterizations, as a lossy data compression problem, can be better formulated using established physical rules widely used in computational physics and chemistry, and different biogeochemical processes can be more robustly integrated within a reactive\uffe2\uff80\uff90transport framework. Through several examples, we demonstrate how mathematical representations derived from physical rules can improve understanding of relevant biogeochemical processes and enable more effective communication between modelers, observationalists, and experimentalists regarding essential questions, such as what measurements are needed to meaningfully inform models and how can models generate new process\uffe2\uff80\uff90level hypotheses to test in empirical studies. Finally, while empirical models with more parameters are often less robust, physical rules\uffe2\uff80\uff90based models can be more robust and show lower predictive equifinality, stemming from their enhanced consistency in representations of processes, interactions and spatial scaling.</p", "keywords": ["0301 basic medicine", "03 medical and health sciences", "Geophysics", "ecosystem biogeochemistry", "empirical response function", "biogeochemical modeling", "Earth Sciences", "soil carbon dynamics", "Oceanography", "Life Below Water", "physical rules", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://escholarship.org/content/qt5m29f2t9/qt5m29f2t9.pdf"}, {"href": "https://doi.org/10.1029/2023jg007674"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Geophysical%20Research%3A%20Biogeosciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1029/2023jg007674", "name": "item", "description": "10.1029/2023jg007674", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1029/2023jg007674"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-10-02T00:00:00Z"}}, {"id": "10.1038/nature24668", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:22Z", "type": "Journal Article", "created": "2017-12-08", "title": "Fire frequency drives decadal changes in soil carbon and nitrogen and ecosystem productivity", "description": "Fire frequency is changing globally and is projected to affect the global carbon cycle and climate. However, uncertainty about how ecosystems respond to decadal changes in fire frequency makes it difficult to predict the effects of altered fire regimes on the carbon cycle; for instance, we do not fully understand the long-term effects of fire on soil carbon and nutrient storage, or whether fire-driven nutrient losses limit plant productivity. Here we analyse data from 48 sites in savanna grasslands, broadleaf forests and needleleaf forests spanning up to 65 years, during which time the frequency of fires was altered at each site. We find that frequently burned plots experienced a decline in surface soil carbon and nitrogen that was non-saturating through time, having 36 per cent (\u00b113 per cent) less carbon and 38 per cent (\u00b116 per cent) less nitrogen after 64 years than plots that were protected from fire. Fire-driven carbon and nitrogen losses were substantial in savanna grasslands and broadleaf forests, but not in temperate and boreal needleleaf forests. We also observe comparable soil carbon and nitrogen losses in an independent field dataset and in dynamic model simulations of global vegetation. The model study predicts that the long-term losses of soil nitrogen that result from more frequent burning may in turn decrease the carbon that is sequestered by net primary productivity by about 20 per cent of the total carbon that is emitted from burning biomass over the same period. Furthermore, we estimate that the effects of changes in fire frequency on ecosystem carbon storage may be 30 per cent too low if they do not include multidecadal changes in soil carbon, especially in drier savanna grasslands. Future changes in fire frequency may shift ecosystem carbon storage by changing soil carbon pools and nitrogen limitations on plant growth, altering the carbon sink capacity of frequently burning savanna grasslands and broadleaf forests.", "keywords": ["2. Zero hunger", "Carbon Sequestration", "Time Factors", "Nitrogen", "carbon", "Geographic Mapping", "Phosphorus", "15. Life on land", "Grassland", "01 natural sciences", "nitrogen", "Carbon", "Wildfires", "Soil", "Spatio-Temporal Analysis", "13. Climate action", "XXXXXX - Unknown", "Potassium", "carbon cycle (biogeochemistry)", "Calcium", "ecosystems", "soils", "fire", "Ecosystem", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1038/nature24668"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/nature24668", "name": "item", "description": "10.1038/nature24668", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/nature24668"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-12-11T00:00:00Z"}}, {"id": "10.1038/ncomms13653", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:22Z", "type": "Journal Article", "created": "2016-11-29", "title": "Massive remobilization of permafrost carbon during post-glacial warming", "description": "Abstract<p>Recent hypotheses, based on atmospheric records and models, suggest that permafrost carbon (PF-C) accumulated during the last glaciation may have been an important source for the atmospheric CO2 rise during post-glacial warming. However, direct physical indications for such PF-C release have so far been absent. Here we use the Laptev Sea (Arctic Ocean) as an archive to investigate PF-C destabilization during the last glacial\uffe2\uff80\uff93interglacial period. Our results show evidence for massive supply of PF-C from Siberian soils as a result of severe active layer deepening in response to the warming. Thawing of PF-C must also have brought about an enhanced organic matter respiration and, thus, these findings suggest that PF-C may indeed have been an important source of CO2 across the extensive permafrost domain. The results challenge current paradigms on the post-glacial CO2 rise and, at the same time, serve as a harbinger for possible consequences of the present-day warming of PF-C soils.</p", "keywords": ["550", "Science", "Q", "Permafrost", "Carbon cycle (Biogeochemistry)", "Climatic changes", "Biogeochemistry", "15. Life on land", "01 natural sciences", "Article", "13. Climate action", "SDG 13 - Climate Action", "SDG 14 - Life Below Water", "LAPTEV SEA SHELF; PARTICULATE ORGANIC-MATTER; LAST GLACIAL TERMINATION; ADJACENT NEARSHORE ZONE; GREENLAND STADIAL 1; LENA RIVER DELTA; INTERIOR ALASKA; YOUNGER DRYAS; ARCTIC-OCEAN; NE SIBERIA", "Cryosphere", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://www.nature.com/articles/ncomms13653.pdf"}, {"href": "https://doi.org/10.1038/ncomms13653"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Communications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/ncomms13653", "name": "item", "description": "10.1038/ncomms13653", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/ncomms13653"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-11-29T00:00:00Z"}}, {"id": "10.1038/ncomms15347", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:22Z", "type": "Journal Article", "created": "2017-05-17", "title": "Global perturbation of organic carbon cycling by river damming", "description": "Abstract<p>The damming of rivers represents one of the most far-reaching human modifications of the flows of water and associated matter from land to sea. Dam reservoirs are hotspots of sediment accumulation, primary productivity (P) and carbon mineralization (R) along the river continuum. Here we show that for the period 1970\uffe2\uff80\uff932030, global carbon mineralization in reservoirs exceeds carbon fixation (P&lt;R); the global P/R ratio, however, varies significantly, from 0.20 to 0.58 because of the changing age distribution of dams. We further estimate that at the start of the twenty-first century, in-reservoir burial plus mineralization eliminated 4.0\uffc2\uffb10.9\uffe2\uff80\uff89Tmol per year (48\uffc2\uffb111 Tg C per year) or 13% of total organic carbon (OC) carried by rivers to the oceans. Because of the ongoing boom in dam building, in particular in emerging economies, this value could rise to 6.9\uffc2\uffb11.5\uffe2\uff80\uff89Tmol per year (83\uffc2\uffb118 Tg C per year) or 19% by 2030.</p", "keywords": ["Environnement et pollution", "13. Climate action", "Science", "Q", "Earth Sciences", "G\u00e9ochimie", "Biogeochemistry", " carbon cycle", " dams and reservoirs", "01 natural sciences", "Article", "6. Clean water", "Atmospheric Sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://escholarship.org/content/qt341579vd/qt341579vd.pdf"}, {"href": "https://dipot.ulb.ac.be/dspace/bitstream/2013/251365/3/doi_234992.pdf"}, {"href": "https://doi.org/10.1038/ncomms15347"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Communications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/ncomms15347", "name": "item", "description": "10.1038/ncomms15347", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/ncomms15347"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-05-17T00:00:00Z"}}, {"id": "10.1038/s41467-020-18451-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:24Z", "type": "Journal Article", "created": "2020-09-18", "title": "The influence of soil age on ecosystem structure and function across biomes", "description": "Abstract<p>The importance of soil age as an ecosystem driver across biomes remains largely unresolved. By combining a cross-biome global field survey, including data for 32 soil, plant, and microbial properties in 16 soil chronosequences, with a global meta-analysis, we show that soil age is a significant ecosystem driver, but only accounts for a relatively small proportion of the cross-biome variation in multiple ecosystem properties. Parent material, climate, vegetation and topography predict, collectively, 24 times more variation in ecosystem properties than soil age alone. Soil age is an important local-scale ecosystem driver; however, environmental context, rather than soil age, determines the rates and trajectories of ecosystem development in structure and function across biomes. Our work provides insights into the natural history of terrestrial ecosystems. We propose that, regardless of soil age, changes in the environmental context, such as those associated with global climatic and land-use changes, will have important long-term impacts on the structure and function of terrestrial ecosystems across biomes.</p", "keywords": ["570", "Time Factors", "Life on Land", "Science", "Ecosystem ecology", "Climate", "Veterinary and Food Sciences", "01 natural sciences", "Article", "Soil", "XXXXXX - Unknown", "Ecosystem services", "Biomass", "Macroecology", "Ecosystem", "0105 earth and related environmental sciences", "2. Zero hunger", "Agricultural", "Ecology", "Bacteria", "Forestry Sciences", "Microbiota", "Q", "Fungi", "500", "Biodiversity", "04 agricultural and veterinary sciences", "Biological Sciences", "Biogeochemistry", "Plants", "15. Life on land", "Ecosystem Ecology", "Biota", ":Environmental engineering [Engineering]", "3. Good health", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Environmental Sciences"]}, "links": [{"href": "https://eprints.ncl.ac.uk/fulltext.aspx?url=269091/38BD2A74-0D2C-4282-B258-AAF0B27C4B6C.pdf&pub_id=269091"}, {"href": "https://escholarship.org/content/qt9m77r3st/qt9m77r3st.pdf"}, {"href": "https://doi.org/10.1038/s41467-020-18451-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Communications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41467-020-18451-3", "name": "item", "description": "10.1038/s41467-020-18451-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41467-020-18451-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-09-18T00:00:00Z"}}, {"id": "10.1038/s41558-023-01721-5", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:25Z", "type": "Journal Article", "created": "2023-06-29", "title": "Soil organic carbon stocks potentially at risk of decline with organic farming expansion", "description": "The authors simulated the impact of organic farming expansion on soil organic carbon. They found that soil organic carbon stock may be at risk of decline if the complete conversion to organic farming does not involve additional practices such as widespread cover cropping and residue recycling.Organic farming is often considered a strategy that increases croplands' soil organic carbon (SOC) stock. However, organic farms currently occupy only a small fraction of cropland, and it is unclear how the full-scale expansion of organic farming will impact soil carbon inputs and SOC stocks. Here we use a spatially explicit biogeochemical model to show that the complete conversion of global cropland to organic farming without the use of cover crops and plant residue (normative scenario) will result in a 40% reduction of global soil carbon input and 9% decline in SOC stock. An optimal organic scenario that supports widespread cover cropping and enhanced residue recycling will reduce global soil carbon input by 31%, and SOC can be preserved after 20 yr following conversion to organic farming. These results suggest that expanding organic farming might reduce the potential for soil carbon sequestration unless appropriate farming practices are implemented.", "keywords": ["[SDE] Environmental Sciences", "2. Zero hunger", "Horizon 2020", "Supplementary Information", "550", "330", "QH301 Biology", "610", "Environmental Science (miscellaneous)", "15. Life on land", "7. Clean energy", "630", "Environmental impact", "QH301", "biogeochemistry", "13. Climate action", "[SDE]Environmental Sciences", "SDG 13 - Climate Action", "774378", "Social Sciences (miscellaneous)", "agriculture", "European Research Council"]}, "links": [{"href": "https://doi.org/10.1038/s41558-023-01721-5"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Climate%20Change", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41558-023-01721-5", "name": "item", "description": "10.1038/s41558-023-01721-5", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41558-023-01721-5"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-06-29T00:00:00Z"}}, {"id": "10.1038/s41561-019-0318-6", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:26Z", "type": "Journal Article", "created": "2019-03-11", "title": "Drought impacts on terrestrial primary production underestimated by satellite monitoring", "description": "Satellite retrievals of information about the Earth's surface are widely used to monitor global terrestrial photosynthesis and primary production and to examine the ecological impacts of droughts. Methods for estimating photosynthesis from space commonly combine information on vegetation greenness, incoming radiation, temperature and atmospheric demand for water (vapour-pressure deficit), but do not account for the direct effects of low soil moisture. They instead rely on vapour-pressure deficit as a proxy for dryness, despite widespread evidence that soil moisture deficits have a direct impact on vegetation, independent of vapour-pressure deficit. Here, we use a globally distributed measurement network to assess the effect of soil moisture on photosynthesis, and identify a common bias in an ensemble of satellite-based estimates of photosynthesis that is governed by the magnitude of soil moisture effects on photosynthetic light-use efficiency. We develop methods to account for the influence of soil moisture and estimate that soil moisture effects reduce global annual photosynthesis by ~15%, increase interannual variability by more than 100% across 25% of the global vegetated land surface, and amplify the impacts of extreme events on primary production. These results demonstrate the importance of soil moisture effects for monitoring carbon-cycle variability and drought impacts on vegetation productivity from space.", "keywords": ["550", "0207 environmental engineering", "02 engineering and technology", "01 natural sciences", "Physical Geography and Environmental Geoscience", "USE EFFICIENCY", "NET PRIMARY PRODUCTION", "Meteorology & Atmospheric Sciences", "Geosciences", " Multidisciplinary", "WATER-STRESS", "Physical geography and environmental geoscience", "0105 earth and related environmental sciences", "2. Zero hunger", "Multidisciplinary", "Science & Technology", "CLIMATE-CHANGE", "Ecology", "PHOTOSYNTHESIS", "Geology", "GROSS PRIMARY PRODUCTION", "Carbon cycle", "Biogeochemistry", "15. Life on land", "FOREST", "6. Clean water", "ATMOSPHERIC DEMAND", "13. Climate action", "Physical Sciences", "Earth Sciences", "RADIATION", "CARBON UPTAKE", "Geosciences"]}, "links": [{"href": "http://www.nature.com/articles/s41561-019-0318-6.pdf"}, {"href": "https://escholarship.org/content/qt2hr7r7gk/qt2hr7r7gk.pdf"}, {"href": "https://doi.org/10.1038/s41561-019-0318-6"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Geoscience", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41561-019-0318-6", "name": "item", "description": "10.1038/s41561-019-0318-6", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41561-019-0318-6"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-03-11T00:00:00Z"}}, {"id": "10.1038/s41561-024-01505-2", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-16T16:17:27Z", "type": "Journal Article", "created": "2024-09-02", "title": "Spatial variability in Arctic\u2013boreal fire regimes influenced by environmental and human factors", "description": "Abstract<p>Wildfire activity in Arctic and boreal regions is rapidly increasing, with severe consequences for climate and human health. Regional long-term variations in fire frequency and intensity characterize fire regimes. The spatial variability in Arctic\uffe2\uff80\uff93boreal fire regimes and their environmental and anthropogenic drivers, however, remain poorly understood. Here we present a fire tracking system to map the sub-daily evolution of all circumpolar Arctic\uffe2\uff80\uff93boreal fires between 2012 and 2023 using 375\uffe2\uff80\uff89m Visible Infrared Imaging Radiometer Suite active fire detections and the resulting dataset of the ignition time, location, size, duration, spread and intensity of individual fires. We use this dataset to classify the Arctic\uffe2\uff80\uff93boreal biomes into seven distinct \uffe2\uff80\uff98pyroregions\uffe2\uff80\uff99 with unique climatic and geographic environments. We find that these pyroregions exhibit varying responses to environmental drivers, with boreal North America, eastern Siberia and northern tundra regions showing the highest sensitivity to climate and lightning density. In addition, anthropogenic factors play an important role in influencing fire number and size, interacting with other factors. Understanding the spatial variability of fire regimes and its interconnected drivers in the Arctic\uffe2\uff80\uff93boreal domain is important for improving future predictions of fire activity and identifying areas at risk for extreme events.</p", "keywords": ["Environmental impact", "Fire ecology", "Natural hazards", "Boreal ecology", "Biogeochemistry", "Article"]}, "links": [{"href": "https://www.nature.com/articles/s41561-024-01505-2.pdf"}, {"href": "https://escholarship.org/content/qt7370v7qr/qt7370v7qr.pdf"}, {"href": "https://doi.org/10.1038/s41561-024-01505-2"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature%20Geoscience", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41561-024-01505-2", "name": "item", "description": "10.1038/s41561-024-01505-2", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41561-024-01505-2"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-09-01T00:00:00Z"}}, {"id": "10.1038/s41586-023-06042-3", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:27Z", "type": "Journal Article", "created": "2023-05-24", "title": "Microbial carbon use efficiency promotes global soil carbon storage", "description": "Abstract<p>Soils store more carbon than other terrestrial ecosystems1,2. How soil organic carbon (SOC) forms and persists remains uncertain1,3, which makes it challenging to understand how it will respond to climatic change3,4. It has been suggested that soil microorganisms play an important role in SOC formation, preservation and loss5\uffe2\uff80\uff937. Although microorganisms affect the accumulation and loss of soil organic matter through many pathways4,6,8\uffe2\uff80\uff9311, microbial carbon use efficiency (CUE) is an integrative metric that can capture the balance of these processes12,13. Although CUE has the potential to act as a predictor of variation in SOC storage, the role of CUE in SOC persistence remains unresolved7,14,15. Here we examine the relationship between CUE and the preservation of SOC, and interactions with climate, vegetation and edaphic properties, using a combination of global-scale datasets, a microbial-process explicit model, data assimilation, deep learning and meta-analysis. We find that CUE is at least four times as important as other evaluated factors, such as carbon input, decomposition or vertical transport, in determining SOC storage and its spatial variation across the globe. In addition, CUE shows a positive correlation with SOC content. Our findings point to microbial CUE as a major determinant of global SOC storage. Understanding the microbial processes underlying CUE and their environmental dependence may help the prediction of SOC feedback to a changing climate.</p", "keywords": ["Carbon Sequestration", "Supplementary Information", "550", "Naturgeografi", "General Science & Technology", "Climate Change", "Veterinary and Food Sciences", "Soil Science", "Datasets as Topic", "Markvetenskap", "530", "630", "Article", "[SDU] Sciences of the Universe [physics]", "Soil", "Deep Learning", "SDG 13 - Climate Action", "General", "Ecosystem", "Soil Microbiology", "SDG 15 - Life on Land", "2. Zero hunger", "Ekologi", "Agricultural", "Ecology", "Forestry Sciences", "15. Life on land", "Biogeochemistry", "Biological Sciences", "Plants", "Carbon", "Climate Action", "Physical Geography", "13. Climate action", "[SDU]Sciences of the Universe [physics]"]}, "links": [{"href": "https://www.nature.com/articles/s41586-023-06042-3.pdf"}, {"href": "https://escholarship.org/content/qt7gx1r34k/qt7gx1r34k.pdf"}, {"href": "https://scholars.unh.edu/context/faculty_pubs/article/2655/viewcontent/11.pdf"}, {"href": "https://doi.org/10.1038/s41586-023-06042-3"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Nature", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41586-023-06042-3", "name": "item", "description": "10.1038/s41586-023-06042-3", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41586-023-06042-3"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-05-24T00:00:00Z"}}, {"id": "10.1038/s41612-021-00167-w", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:29Z", "type": "Journal Article", "created": "2021-03-03", "title": "Soil moisture signature in global weather balloon soundings", "description": "Abstract<p>The land surface influences the atmospheric boundary layer (ABL) through its impacts on the partitioning of available energy into evaporation and warming. Previous research on understanding this complex link focused mainly on site-scale flux observations, gridded satellite observations, climate modeling, and machine-learning experiments. Observational evidence of land surface conditions, among which soil moisture, impacting ABL properties at intermediate landscape scales is lacking. Here, we use a combination of global weather balloon soundings, satellite-observed soil moisture, and a coupled land-atmosphere model to infer the soil moisture impact on the ABL. The inferred relationship between soil moisture and surface flux partitioning reflects distinctive energy- and water-limited regimes, even at the landscape scale. We find significantly different behavior between those two regimes, associating dry conditions with on average warmer (\uffe2\uff89\uff883\uffe2\uff80\uff89K), higher (\uffe2\uff89\uff88400\uffe2\uff80\uff89m) and drier (\uffe2\uff89\uff881\uffe2\uff80\uff89kPa) afternoon ABLs than wet conditions. This evidence of land\uffe2\uff80\uff93atmosphere coupling from globally distributed atmospheric measurements highlights the need for an accurate representation of land\uffe2\uff80\uff93atmosphere coupling into climate models and their climate change projections.</p>", "keywords": ["Atmospheric Science", "Global and Planetary Change", "Article ; Atmospheric dynamics ; Biogeochemistry ; Hydrology", "0207 environmental engineering", "02 engineering and technology", "15. Life on land", "01 natural sciences", "Environmental sciences", "13. Climate action", "Earth and Environmental Sciences", "Meteorology. Climatology", "Environmental Chemistry", "Life Science", "GE1-350", "QC851-999", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://www.nature.com/articles/s41612-021-00167-w.pdf"}, {"href": "https://doi.org/10.1038/s41612-021-00167-w"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/npj%20Climate%20and%20Atmospheric%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1038/s41612-021-00167-w", "name": "item", "description": "10.1038/s41612-021-00167-w", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1038/s41612-021-00167-w"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-03-03T00:00:00Z"}}, {"id": "10.1051/forest/2009083", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:38Z", "type": "Journal Article", "created": "2009-12-23", "title": "Effects Of Stand Density On Ecosystem Properties Of Subalpine Forests In The Southern Rocky Mountains, Usa", "description": "Open AccessMixed coniferous, subalpine forest communities in the Rocky Mountains are historically dense and have experienced infrequent, high-severity fire. However, many of these high-elevation stands are thinned for a number of perceived benefits.* We explored the effects of forest stand density on ecosystem properties in subalpine forests in Colorado, USA, 17-18 y after forests were managed for timber.* Forest structure significantly altered the composition and chemical signature of plant communities. Previously managed stands contained lower density of overstory trees and higher ground cover compared to paired reference stands. Foliar phenolic concentration of several species was negatively related to basal area of overstory trees. Furthermore, reductions in stand density increased total foliar phenolic:nitrogen ratios in some species, suggesting that gap formation may drive long-term changes in litter quality. Despite significant changes in forest structure, reductions in stand density did not leave a strong legacy in surface soil properties, likely due to the integrity of soil organic matter reserves.* Changes in forest structure associated with past management has left a long-term impact on plant communities but has only subtly altered soil nutrient cycling, possibly due to trade offs between litter decomposability and microclimate associated with reductions in canopy cover.", "keywords": ["cycle de l'azote du sol", "0106 biological sciences", "biog\u00e9ochimie", "biogeochemistry<br>---<br>chimie foliaire", "densit\u00e9 du peuplement", "foliar chemistry", "soil nitrogen cycling", "stand density", "phenolic", "[SDV.SA.SF] Life Sciences [q-bio]/Agricultural sciences/Silviculture", " forestry", "15. Life on land", "01 natural sciences", "compos\u00e9s ph\u00e9noliques"]}, "links": [{"href": "https://doi.org/10.1051/forest/2009083"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Annals%20of%20Forest%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1051/forest/2009083", "name": "item", "description": "10.1051/forest/2009083", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1051/forest/2009083"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-01-01T00:00:00Z"}}, {"id": "10.1073/pnas.2317332121", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:17:46Z", "type": "Journal Article", "created": "2024-04-26", "title": "Negative correlation between soil salinity and soil organic carbon variability", "description": "<p>Soil organic carbon (SOC) is vital for terrestrial ecosystems, affecting biogeochemical processes, and soil health. It is known that soil salinity impacts SOC content, yet the specific direction and magnitude of SOC variability in relation to soil salinity remain poorly understood. Analyzing 43,459 mineral soil samples (SOC &lt; 150 g kg\uffe2\uff88\uff921) collected across different land covers since 1992, we approximate a soil salinity increase from 1 to 5 dS m\uffe2\uff88\uff921in croplands would be associated with a decline in mineral soils SOC from 0.14 g kg\uffe2\uff88\uff921above the mean predicted SOC (SOC\uffc2\uffafc= 18.47 g kg\uffe2\uff88\uff921) to 0.46 g kg\uffe2\uff88\uff921belowSOC\uffc2\uffafc(~\uffe2\uff88\uff92430%), while for noncroplands, such decline is sharper, from 0.96 aboveSOC\uffc2\uffafnc= 35.96 g kg\uffe2\uff88\uff921to 4.99 belowSOC\uffc2\uffafnc(~\uffe2\uff88\uff92620%). Although salinity\uffe2\uff80\uff99s significance in explaining SOC variability is minor (&lt;6%), we estimate a one SD increase in salinity of topsoil samples (0 to 7 cm) correlates with respectiveSOC\uffc2\uffafdeclines of ~4.4% and ~9.26%, relative toSOC\uffc2\uffafcandSOC\uffc2\uffafnc. TheSOC\uffc2\uffafdecline in croplands is greatest in vegetation/cropland mosaics while lands covered with evergreen needle-leaved trees are estimated with the highestSOC\uffc2\uffafdecline in noncroplands. We identify soil nitrogen, land cover, and precipitation Seasonality Index as the most significant parameters in explaining the SOC\uffe2\uff80\uff99s variability. The findings provide insights into SOC dynamics under increased soil salinity, improving understanding of SOC stock responses to land degradation and climate warming.</p", "keywords": ["570", "soil salinity", "Supplementary Data", "QH301 Biology", "500", "04 agricultural and veterinary sciences", "environmental impact", "01 natural sciences", "soil organic carbon", "QH301", "biogeochemistry", "carbon cycle", "Physical Sciences", "SDG 13 - Climate Action", "0401 agriculture", " forestry", " and fisheries", "General", "SDG 15 - Life on Land", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1073/pnas.2317332121"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Proceedings%20of%20the%20National%20Academy%20of%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1073/pnas.2317332121", "name": "item", "description": "10.1073/pnas.2317332121", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1073/pnas.2317332121"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-04-26T00:00:00Z"}}, {"id": "10.1089/ast.2022.0062", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:18:00Z", "type": "Journal Article", "created": "2023-02-22", "title": "Rock Traits Drive Complex Microbial Communities at the Edge of Life", "description": "Antarctic deserts are among the driest and coldest ecosystems of the planet; there, some microbes survive under these extreme conditions inside porous rocks, forming the so-called endolithic communities. Yet the contribution of distinct rock traits to support complex microbial assemblies remains poorly determined. Here, we combined an extensive Antarctic rock survey with rock microbiome sequencing and ecological networks and found that contrasting combinations of microclimatic and rock traits such as thermal inertia, porosity, iron concentration, and quartz cement can help explain the multiple complex microbial assemblies found in Antarctic rocks. Our work highlights the pivotal role of rocky substrate heterogeneity in sustaining contrasting groups of microorganisms, which is essential to understand life at the edge on Earth and for the search for life on other rocky planets such as Mars.", "keywords": ["570", "Earth", " Planet", "Habitability", "500", "Antarctica; Extremophiles; Biogeochemistry; Habitability; Astrobiology; Terrestrial analog;", "Planets", "Antarctic Regions", "Biogeochemistry", "15. Life on land", "Astrobiology", "Extremophiles", "Terrestrial analog", "13. Climate action", "Exobiology", "Antarctica", "14. Life underwater", "Settore BIO/19 - MICROBIOLOGIA GENERALE", "Ecosystem"]}, "links": [{"href": "https://doi.org/10.1089/ast.2022.0062"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Astrobiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1089/ast.2022.0062", "name": "item", "description": "10.1089/ast.2022.0062", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1089/ast.2022.0062"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-04-01T00:00:00Z"}}, {"id": "10.1111/ele.12453", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-16T16:18:19Z", "type": "Journal Article", "created": "2015-05-25", "title": "Crop Rotational Diversity Enhances Belowground Communities And Functions In An Agroecosystem", "description": "Abstract<p>Biodiversity loss, an important consequence of agricultural intensification, can lead to reductions in agroecosystem functions and services. Increasing crop diversity through rotation may alleviate these negative consequences by restoring positive aboveground\uffe2\uff80\uff93belowground interactions. Positive impacts of aboveground biodiversity on belowground communities and processes have primarily been observed in natural systems. Here, we test for the effects of increased diversity in an agroecosystem, where plant diversity is increased over time through crop rotation. As crop diversity increased from one to five species, distinct soil microbial communities were related to increases in soil aggregation, organic carbon, total nitrogen, microbial activity and decreases in the carbon\uffe2\uff80\uff90to\uffe2\uff80\uff90nitrogen acquiring enzyme activity ratio. This study indicates positive biodiversity\uffe2\uff80\uff93function relationships in agroecosystems, driven by interactions between rotational and microbial diversity. By increasing the quantity, quality and chemical diversity of residues, high diversity rotations can sustain soil biological communities, with positive effects on soil organic matter and soil fertility.</p>", "keywords": ["Crops", " Agricultural", "2. Zero hunger", "Michigan", "Soil", "Nitrogen", "0401 agriculture", " forestry", " and fisheries", "Agriculture", "Biodiversity", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "Carbon", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1111/ele.12453"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/ele.12453", "name": "item", "description": "10.1111/ele.12453", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/ele.12453"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-05-25T00:00:00Z"}}, {"id": "10.1111/gcb.16537", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:18:23Z", "type": "Journal Article", "created": "2022-11-29", "title": "Challenges in upscaling laboratory studies to ecosystems in soil microbiology research", "description": "Abstract<p>Soil microbiology has entered into the big data era, but the challenges in bridging laboratory\uffe2\uff80\uff90, field\uffe2\uff80\uff90, and model\uffe2\uff80\uff90based studies of ecosystem functions still remain. Indeed, the limitation of factors in laboratory experiments disregards interactions of a broad range of in situ environmental drivers leading to frequent contradictions between laboratory\uffe2\uff80\uff90 and field\uffe2\uff80\uff90based studies, which may consequently mislead model development and projections. Upscaling soil microbiology research from laboratory to ecosystems represents one of the grand challenges facing environmental scientists, but with great potential to inform policymakers toward climate\uffe2\uff80\uff90smart and resource\uffe2\uff80\uff90efficient ecosystems. The upscaling is not only a scale problem, but also requires disentangling functional relationships and processes on each level. We point to three potential reasons for the gaps between laboratory\uffe2\uff80\uff90 and field\uffe2\uff80\uff90based studies (i.e., spatiotemporal dynamics, sampling disturbances, and plant\uffe2\uff80\uff93soil\uffe2\uff80\uff93microbial feedbacks), and three key issues of caution when bridging observations and model predictions (i.e., across\uffe2\uff80\uff90scale effect, complex\uffe2\uff80\uff90process coupling, and multi\uffe2\uff80\uff90factor regulation). Field\uffe2\uff80\uff90based studies only cover a limited range of environmental variation that must be supplemented by laboratory and mesocosm manipulative studies when revealing the underlying mechanisms. The knowledge gaps in upscaling soil microbiology from laboratory to ecosystems should motivate interdisciplinary collaboration across experimental, observational, theoretic, and modeling research.</p>", "keywords": ["2. Zero hunger", "0301 basic medicine", "field in situ observation", "0303 health sciences", "soil biogeochemistry", "microbial-based models", "Models", " Theoretical", "Plants", "15. Life on land", "soil microbiology", "Soil", "03 medical and health sciences", "laboratory incubation", "13. Climate action", "Perspective", "global change factors", "Ecosystem", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1111/gcb.16537"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.16537", "name": "item", "description": "10.1111/gcb.16537", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.16537"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-28T00:00:00Z"}}, {"id": "10.1111/gcb.17268", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:18:23Z", "type": "Journal Article", "created": "2024-04-02", "title": "Microbial evolution\u2014An under\u2010appreciated driver of soil carbon cycling", "description": "Abstract<p>Although substantial advances in predicting the ecological impacts of global change have been made, predictions of the evolutionary impacts have lagged behind. In soil ecosystems, microbes act as the primary energetic drivers of carbon cycling; however, microbes are also capable of evolving on timescales comparable to rates of global change. Given the importance of soil ecosystems in global carbon cycling, we assess the potential impact of microbial evolution on carbon\uffe2\uff80\uff90climate feedbacks in this system. We begin by reviewing the current state of knowledge concerning microbial evolution in response to global change and its specific effect on soil carbon dynamics. Through this integration, we synthesize a roadmap detailing how to integrate microbial evolution into ecosystem biogeochemical models. Specifically, we highlight the importance of microscale mechanistic soil carbon models, including choosing an appropriate evolutionary model (e.g., adaptive dynamics, quantitative genetics), validating model predictions with \uffe2\uff80\uff98omics\uffe2\uff80\uff99 and experimental data, scaling microbial adaptations to ecosystem level processes, and validating with ecosystem\uffe2\uff80\uff90scale measurements. The proposed steps will require significant investment of scientific resources and might require 10\uffe2\uff80\uff9320\uffe2\uff80\uff89years to be fully implemented. However, through the application of multi\uffe2\uff80\uff90scale integrated approaches, we will advance the integration of microbial evolution into predictive understanding of ecosystems, providing clarity on its role and impact within the broader context of environmental change.</p", "keywords": ["cycle evolution global change microbe", "570", "550", "Climate", "Evolutionsbiologi", "Soil", "biogeochemistry", "carbon cycle", "evolution", "global change", "Ecosystem", "Soil Microbiology", "Ekologi", "2. Zero hunger", "[SDU.OCEAN]Sciences of the Universe [physics]/Ocean", "Evolutionary Biology", "Ecology", "Atmosphere", "cycle", "[SDU.OCEAN] Sciences of the Universe [physics]/Ocean", " Atmosphere", "Biological Sciences", "15. Life on land", "[SDU.ENVI] Sciences of the Universe [physics]/Continental interfaces", " environment", "Carbon", "6. Clean water", "Environmental sciences", "microbe", "Biological sciences", "Earth sciences", "13. Climate action", "[SDU.ENVI]Sciences of the Universe [physics]/Continental interfaces", "environment", "Environmental Sciences"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/gcb.17268"}, {"href": "https://doi.org/10.1111/gcb.17268"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.17268", "name": "item", "description": "10.1111/gcb.17268", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.17268"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-04-01T00:00:00Z"}}, {"id": "10.1111/gcbb.12255", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:18:25Z", "type": "Journal Article", "created": "2015-02-19", "title": "Bioenergy Harvest, Climate Change, And Forest Carbon In The Oregon Coast Range", "description": "Abstract<p>Forests provide important ecological, economic, and social services, and recent interest has emerged in the potential for using residue from timber harvest as a source of renewable woody bioenergy. The long\uffe2\uff80\uff90term consequences of such intensive harvest are unclear, particularly as forests face novel climatic conditions over the next century. We used a simulation model to project the long\uffe2\uff80\uff90term effects of management and climate change on above\uffe2\uff80\uff90 and belowground forest carbon storage in a watershed in northwestern Oregon. The multi\uffe2\uff80\uff90ownership watershed has a diverse range of current management practices, including little\uffe2\uff80\uff90to\uffe2\uff80\uff90no harvesting on federal lands, short\uffe2\uff80\uff90rotation clear\uffe2\uff80\uff90cutting on industrial land, and a mix of practices on private nonindustrial land. We simulated multiple management scenarios, varying the rate and intensity of harvest, combined with projections of climate change. Our simulations project a wide range of total ecosystem carbon storage with varying harvest rate, ranging from a 45% increase to a 16% decrease in carbon compared to current levels. Increasing the intensity of harvest for bioenergy caused a 2\uffe2\uff80\uff933% decrease in ecosystem carbon relative to conventional harvest practices. Soil carbon was relatively insensitive to harvest rotation and intensity, and accumulated slowly regardless of harvest regime. Climate change reduced carbon accumulation in soil and detrital pools due to increasing heterotrophic respiration, and had small but variable effects on aboveground live carbon and total ecosystem carbon. Overall, we conclude that current levels of ecosystem carbon storage are maintained in part due to substantial portions of the landscape (federal and some private lands) remaining unharvested or lightly managed.\uffc2\uffa0Increasing the intensity of harvest for bioenergy on currently harvested land, however,\uffc2\uffa0led to a relatively small reduction in the ability of forests to store carbon. Climate change is unlikely to substantially alter carbon storage in these forests, absent shifts in disturbance regimes.</p>", "keywords": ["0106 biological sciences", "Carbon dioxide mitigation", "Forest ecology -- Oregon -- Oregon Coast Range", "Forest biomass", "13. Climate action", "Carbon cycle (Biogeochemistry)", "Biomass energy", "Forest Biology", "15. Life on land", "01 natural sciences", "7. Clean energy", "Climatic change", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/gcbb.12255"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcbb.12255", "name": "item", "description": "10.1111/gcbb.12255", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcbb.12255"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-05-25T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2012.02764.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:18:34Z", "type": "Journal Article", "created": "2012-06-17", "title": "Temperature Adaptation Of Bacterial Communities In Experimentally Warmed Forest Soils", "description": "Abstract<p>A detailed understanding of the influence of temperature on soil microbial activity is critical to predict future atmospheric CO2 concentrations and feedbacks to anthropogenic warming. We investigated soils exposed to 3\uffe2\uff80\uff934\uffc2\uffa0years of continuous 5\uffc2\uffa0\uffc2\uffb0C\uffe2\uff80\uff90warming in a field experiment in a temperate forest. We found that an index for the temperature adaptation of the microbial community, Tmin for bacterial growth, increased by 0.19\uffc2\uffa0\uffc2\uffb0C per 1\uffc2\uffa0\uffc2\uffb0C rise in temperature, showing a community shift towards one adapted to higher temperature with a higher temperature sensitivity (Q10(5\uffe2\uff80\uff9315\uffc2\uffa0\uffc2\uffb0C) increased by 0.08 units per 1\uffc2\uffa0\uffc2\uffb0C). Using continuously measured temperature data from the field experiment we modelled in situ bacterial growth. Assuming that warming did not affect resource availability, bacterial growth was modelled to become 60% higher in warmed compared to the control plots, with the effect of temperature adaptation of the community only having a small effect on overall bacterial growth (&lt;5%). However, 3\uffc2\uffa0years of warming decreased bacterial growth, most likely due to substrate depletion because of the initially higher growth in warmed plots. When this was factored in, the result was similar rates of modelled in situ bacterial growth in warmed and control plots after 3\uffc2\uffa0years, despite the temperature difference. We conclude that although temperature adaptation for bacterial growth to higher temperatures was detectable, its influence on annual bacterial growth was minor, and overshadowed by the direct temperature effect on growth rates.</p>", "keywords": ["Q10", "temperature adaptation", "13. Climate action", "leucine incorporation", "soil warming", "0401 agriculture", " forestry", " and fisheries", "bacterial growth", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "minimum temperature"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2012.02764.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2012.02764.x", "name": "item", "description": "10.1111/j.1365-2486.2012.02764.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2012.02764.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-07-11T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2012.02749.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:18:34Z", "type": "Journal Article", "created": "2012-05-24", "title": "Experimental Litterfall Manipulation Drives Large And Rapid Changes In Soil Carbon Cycling In A Wet Tropical Forest", "description": "Abstract<p>Global changes such as variations in plant net primary production are likely to drive shifts in leaf litterfall inputs to forest soils, but the effects of such changes on soil carbon (C) cycling and storage remain largely unknown, especially in C\uffe2\uff80\uff90rich tropical forest ecosystems. We initiated a leaf litterfall manipulation experiment in a tropical rain forest in Costa Rica to test the sensitivity of surface soil C pools and fluxes to different litter inputs. After only 2\uffc2\uffa0years of treatment, doubling litterfall inputs increased surface soil C concentrations by 31%, removing litter from the forest floor drove a 26% reduction over the same time period, and these changes in soil C concentrations were associated with variations in dissolved organic matter fluxes, fine root biomass, microbial biomass, soil moisture, and nutrient fluxes. However, the litter manipulations had only small effects on soil organic C (SOC) chemistry, suggesting that changes in C cycling, nutrient cycling, and microbial processes in response to litter manipulation reflect shifts in the quantity rather than quality of SOC. The manipulation also affected soil CO 2 fluxes; the relative decline in CO 2 production was greater in the litter removal plots (\uffe2\uff88\uff9222%) than the increase in the litter addition plots (+15%). Our analysis showed that variations in CO 2 fluxes were strongly correlated with microbial biomass pools, soil C and nitrogen (N) pools, soil inorganic P fluxes, dissolved organic C fluxes, and fine root biomass. Together, our data suggest that shifts in leaf litter inputs in response to localized human disturbances and global environmental change could have rapid and important consequences for belowground C storage and fluxes in tropical rain forests, and highlight differences between tropical and temperate ecosystems, where belowground C cycling responses to changes in litterfall are generally slower and more subtle.</p>", "keywords": ["2. Zero hunger", "soil biogeochemistry", "microbial biomass", "soil nitrogen", "carbon dioxide", "04 agricultural and veterinary sciences", "dissolved organic matter", "Biogeochemistry", "15. Life on land", "soil carbon chemistry", "root biomass", "13. Climate action", "soil phosphorus", "0401 agriculture", " forestry", " and fisheries", "net primary productivity"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2012.02749.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2012.02749.x", "name": "item", "description": "10.1111/j.1365-2486.2012.02749.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2012.02749.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-06-25T00:00:00Z"}}, {"id": "10.1111/j.1461-0248.2008.01251.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:18:36Z", "type": "Journal Article", "created": "2008-10-02", "title": "Thermal Adaptation Of Soil Microbial Respiration To Elevated Temperature", "description": "Abstract<p>In the short\uffe2\uff80\uff90term heterotrophic soil respiration is strongly and positively related to temperature. In the long\uffe2\uff80\uff90term, its response to temperature is uncertain. One reason for this is because in field experiments increases in respiration due to warming are relatively short\uffe2\uff80\uff90lived. The explanations proposed for this ephemeral response include depletion of fast\uffe2\uff80\uff90cycling, soil carbon pools and thermal adaptation of microbial respiration. Using a &gt;\uffe2\uff80\uff8315\uffe2\uff80\uff83year soil warming experiment in a mid\uffe2\uff80\uff90latitude forest, we show that the apparent \uffe2\uff80\uff98acclimation\uffe2\uff80\uff99 of soil respiration at the ecosystem scale results from combined effects of reductions in soil carbon pools and microbial biomass, and thermal adaptation of microbial respiration. Mass\uffe2\uff80\uff90specific respiration rates were lower when seasonal temperatures were higher, suggesting that rate reductions under experimental warming likely occurred through temperature\uffe2\uff80\uff90induced changes in the microbial community. Our results imply that stimulatory effects of global temperature rise on soil respiration rates may be lower than currently predicted.</p>", "keywords": ["0106 biological sciences", "Hot Temperature", "Physiological", "adaptation", "carbon cycling", "soil respiration", "01 natural sciences", "climate warming", "thermal biology", "Soil", "Biomass", "Adaptation", "Soil Microbiology", "Evolutionary Biology", "Ecology", "temperature", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "Adaptation", " Physiological", "Climate Action", "climate change", "13. Climate action", "Ecological Applications", "Regression Analysis", "0401 agriculture", " forestry", " and fisheries", "CO2", "Seasons", "microbial community", "Acclimation"]}, "links": [{"href": "https://escholarship.org/content/qt1kz5j4pn/qt1kz5j4pn.pdf"}, {"href": "https://doi.org/10.1111/j.1461-0248.2008.01251.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology%20Letters", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1461-0248.2008.01251.x", "name": "item", "description": "10.1111/j.1461-0248.2008.01251.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1461-0248.2008.01251.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2008-11-05T00:00:00Z"}}, {"id": "10.1128/mbio.00455-24", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:18:50Z", "type": "Journal Article", "created": "2024-03-25", "title": "Priorities, opportunities, and challenges for integrating microorganisms into Earth system models for climate change prediction", "description": "ABSTRACT                                     <p>Climate change jeopardizes human health, global biodiversity, and sustainability of the biosphere. To make reliable predictions about climate change, scientists use Earth system models (ESMs) that integrate physical, chemical, and biological processes occurring on land, the oceans, and the atmosphere. Although critical for catalyzing coupled biogeochemical processes, microorganisms have traditionally been left out of ESMs. Here, we generate a \uffe2\uff80\uff9ctop 10\uffe2\uff80\uff9d list of priorities, opportunities, and challenges for the explicit integration of microorganisms into ESMs. We discuss the need for coarse-graining microbial information into functionally relevant categories, as well as the capacity for microorganisms to rapidly evolve in response to climate-change drivers. Microbiologists are uniquely positioned to collect novel and valuable information necessary for next-generation ESMs, but this requires data harmonization and transdisciplinary collaboration to effectively guide adaptation strategies and mitigation policy.</p>", "keywords": ["Naturgeografi", "Earth", " Planet", "Climate Change", "Microbiology", "traits", "biogeochemistry", "Humans", "Ecosystem", "Biomedical and Clinical Sciences", "Bacteria", "biogeochemistry; modeling; traits; climate change", "modeling", "Opinion/Hypothesis", "Biodiversity", "Biological Sciences", "Medical microbiology", "Models", " Theoretical", "15. Life on land", "QR1-502", "6. Clean water", "Climate Science", "3. Good health", "Climate Action", "climate change", "Physical Geography", "Medical Microbiology", "13. Climate action", "Biochemistry and cell biology", "Biochemistry and Cell Biology", "Generic health relevance", "Klimatvetenskap"]}, "links": [{"href": "https://journals.asm.org/doi/pdf/10.1128/mbio.00455-24"}, {"href": "https://doi.org/10.1128/mbio.00455-24"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/mBio", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1128/mbio.00455-24", "name": "item", "description": "10.1128/mbio.00455-24", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1128/mbio.00455-24"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-05-08T00:00:00Z"}}, {"id": "10.1371/journal.pone.0092985", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:19:10Z", "type": "Journal Article", "created": "2014-03-25", "title": "Comparison Of Seasonal Soil Microbial Process In Snow-Covered Temperate Ecosystems Of Northern China", "description": "Open AccessMore than half of the earth's terrestrial surface currently experiences seasonal snow cover and soil frost. Winter compositional and functional investigations in soil microbial community are frequently conducted in alpine tundra and boreal forest ecosystems. However, little information on winter microbial biogeochemistry is known from seasonally snow-covered temperate ecosystems. As decomposer microbes may differ in their ability/strategy to efficiently use soil organic carbon (SOC) within different phases of the year, understanding seasonal microbial process will increase our knowledge of biogeochemical cycling from the aspect of decomposition rates and corresponding nutrient dynamics. In this study, we measured soil microbial biomass, community composition and potential SOC mineralization rates in winter and summer, from six temperate ecosystems in northern China. Our results showed a clear pattern of increased microbial biomass C to nitrogen (N) ratio in most winter soils. Concurrently, a shift in soil microbial community composition occurred with higher fungal to bacterial biomass ratio and gram negative (G-) to gram positive (G+) bacterial biomass ratio in winter than in summer. Furthermore, potential SOC mineralization rate was higher in winter than in summer. Our study demonstrated a distinct transition of microbial community structure and function from winter to summer in temperate snow-covered ecosystems. Microbial N immobilization in winter may not be the major contributor for plant growth in the following spring.", "keywords": ["Biomass (ecology)", "Atmospheric Science", "Microbial population biology", "Decomposer", "Nutrient cycle", "Physical Phenomena", "Agricultural and Biological Sciences", "Soil", "Terrestrial ecosystem", "Snow", "Soil water", "Biomass", "Phospholipids", "Soil Microbiology", "Minerals", "Glucan 1", "4-beta-Glucosidase", "Ecology", "Geography", "Mineralization (soil science)", "Q", "R", "Life Sciences", "04 agricultural and veterinary sciences", "Biogeochemistry", "16. Peace & justice", "Earth and Planetary Sciences", "Physical Sciences", "Medicine", "Seasons", "Ecosystem Functioning", "Research Article", "China", "Nitrogen", "Science", "Soil Science", "Biogeochemical cycle", "Environmental science", "Meteorology", "Genetics", "Arctic Permafrost Dynamics and Climate Change", "Tundra", "Biology", "Ecosystem", "Soil science", "Bacteria", "Fungi", "Microbial Diversity in Antarctic Ecosystems", "15. Life on land", "Carbon", "Temperate climate", "13. Climate action", "FOS: Biological sciences", "Environmental Science", "0401 agriculture", " forestry", " and fisheries", "Soil Carbon Dynamics and Nutrient Cycling in Ecosystems"], "contacts": [{"organization": "Xinyue Zhang, Wei Wang, Weile Chen, Naili Zhang, Hui Zeng,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1371/journal.pone.0092985"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/PLoS%20ONE", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1371/journal.pone.0092985", "name": "item", "description": "10.1371/journal.pone.0092985", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1371/journal.pone.0092985"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-03-25T00:00:00Z"}}, {"id": "10.1890/09-1365.1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:19:38Z", "type": "Journal Article", "created": "2010-06-22", "title": "Tropical Forest Soil Microbial Communities Couple Iron And Carbon Biogeochemistry", "description": "<p>We report that iron\uffe2\uff80\uff90reducing bacteria are primary mediators of anaerobic carbon oxidation in upland tropical soils spanning a rainfall gradient (3500\uffe2\uff80\uff935000 mm/yr) in northeast Puerto Rico. The abundant rainfall and high net primary productivity of these tropical forests provide optimal soil habitat for iron\uffe2\uff80\uff90reducing and iron\uffe2\uff80\uff90oxidizing bacteria. Spatially and temporally dynamic redox conditions make iron\uffe2\uff80\uff90transforming microbial communities central to the belowground carbon cycle in these wet tropical forests. The exceedingly high abundance of iron\uffe2\uff80\uff90reducing bacteria (up to 1.2 \uffc3\uff97 109 cells per gram soil) indicated that they possess extensive metabolic capacity to catalyze the reduction of iron minerals. In soils from the higher rainfall sites, measured rates of ferric iron reduction could account for up to 44% of organic carbon oxidation. Iron reducers appeared to compete with methanogens when labile carbon availability was limited. We found large numbers of bacteria that oxidize reduced iron at sites with high rates of iron reduction and large numbers of iron reducers. The coexistence of large populations of iron\uffe2\uff80\uff90reducing and iron\uffe2\uff80\uff90oxidizing bacteria is evidence for rapid iron cycling between its reduced and oxidized states and suggests that mutualistic interactions among these bacteria ultimately fuel organic carbon oxidation and inhibit CH4 production in these upland tropical forests.</p>", "keywords": ["2. Zero hunger", "570", "Tropical Climate", "Bacteria", "Iron", "Puerto Rico", "Communities", "58", "04 agricultural and veterinary sciences", "Forests", "Biogeochemistry", "15. Life on land", "Methyl Methanesulfonate", "54", "Carbon", "Carbon Cycle", "Trees", "Soil", "13. Climate action", "Oxidation", "Soils", "0401 agriculture", " forestry", " and fisheries", "Soil Microbiology", "Reduction"]}, "links": [{"href": "https://doi.org/10.1890/09-1365.1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1890/09-1365.1", "name": "item", "description": "10.1890/09-1365.1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1890/09-1365.1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-01-18T00:00:00Z"}}, {"id": "10.1890/13-0616.1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:19:38Z", "type": "Journal Article", "created": "2013-09-11", "title": "Does agricultural crop diversity enhance soil microbial biomass and organic matter dynamics? A meta-analysis", "description": "<p>Our increasing dependence on a small number of agricultural crops, such as corn, is leading to reductions in agricultural biodiversity. Reductions in the number of crops in rotation or the replacement of rotations by monocultures are responsible for this loss of biodiversity. The belowground implications of simplifying agricultural plant communities remain unresolved; however, agroecosystem sustainability will be severely compromised if reductions in biodiversity reduce soil C and N concentrations, alter microbial communities, and degrade soil ecosystem functions as reported in natural communities. We conducted a meta\uffe2\uff80\uff90analysis of 122 studies to examine crop rotation effects on total soil C and N concentrations, and the faster cycling microbial biomass C and N pools that play key roles in soil nutrient cycling and physical processes such as aggregate formation. We specifically examined how rotation crop type and management practices influence C and N dynamics in different climates and soil types. We found that adding one or more crops in rotation to a monoculture increased total soil C by 3.6% and total N by 5.3%, but when rotations included a cover crop (i.e., crops that are not harvested but produced to enrich the soil and capture inorganic N), total C increased by 8.5% and total N 12.8%. Rotations substantially increased the soil microbial biomass C (20.7%) and N (26.1%) pools, and these overwhelming effects on microbial biomass were not moderated by crop type or management practices. Crop rotations, especially those that include cover crops, sustain soil quality and productivity by enhancing soil C, N, and microbial biomass, making them a cornerstone for sustainable agroecosystems.</p>", "keywords": ["Crops", " Agricultural", "2. Zero hunger", "microbial biomass", "soil nitrogen", "sustainable agroecosystems", "Agriculture", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "12. Responsible consumption", "meta-analysis", "Soil", "crop rotation", "monoculture", "13. Climate action", "gricultural biodiversity", "0401 agriculture", " forestry", " and fisheries", "Biomass", "soil carbon", "Soil Microbiology"], "contacts": [{"organization": "McDaniel, Marshall D., Tiemann, Lisa K., Grandy, A. Stuart,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1890/13-0616.1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecological%20Applications", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1890/13-0616.1", "name": "item", "description": "10.1890/13-0616.1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1890/13-0616.1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-04-01T00:00:00Z"}}, {"id": "10.21203/rs.3.rs-5626097/v1", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-16T16:19:42Z", "type": "Journal Article", "created": "2025-03-19", "title": "Long-term Stability of Soil Spectral Libraries with Chemical and Spectral Insights", "description": "<title>Abstract</title>         <p>Soil spectral libraries (SSLs) are physical soil samples that are stored under different conditions by many users for decades. Yet the long-term stability of soil properties under these stored conditions remains largely unexplored. This study investigates the chemical and spectral stability of the Israeli legacy SSL, established in 1987, stored under uncontrolled indoor conditions for thirty-four to thirty-seven years. Ninety-one Mediterranean soils from this collection were reanalyzed for soil organic matter (SOM), calcium carbonate (CaCO\u2083), using identical protocols and spectroscopic methods in 1987 and 2024 (chemical) and 2004 and 2024 (spectral).  Results demonstrate minimal changes in SOM and CaCO\u2083, supported by strong linear correlations between historical and contemporary datasets (R<sup>2</sup> of 0.925 and 0.962 for SOM and CaCO3 respectively).  Spectroscopic analysis showed superior precision and reliability compared to wet chemistry. Additionally, spectral stability over time was confirmed using the modified average spectral difference stability (mASDS) metric, Principal Component Analysis (PCA) and partial least squares regression (PLSR(, underscoring the robustness of spectroscopic approaches. Spectral modeling of the chemical data from both years revealed outliers which we assume emerged from analytical accuracy differences and not from spectroscopy errors. This study highlights that Mediterranean soils stored under simple un-controlled conditions maintain their physical and chemical integrity, enabling reliable longitudinal studies. These findings advocate for broader SSL archiving efforts to support soil health monitoring, climate change studies, and sustainable land management practices by utilizing old collections of stored soils that can be measured spectrally to enrich SSLs worldwide. Future research should focus on other climatic regions and soil types to generalize these findings and address possible microbial activity impacts during storage. This work underscores SSLs as critical resources for soil science, offering insights into temporal soil dynamics and facilitating global soil monitoring efforts.</p>", "keywords": ["Environmental sciences", "Science", "Q", "R", "Medicine", "Biogeochemistry", "Article"]}, "links": [{"href": "https://doi.org/10.21203/rs.3.rs-5626097/v1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Scientific%20Reports", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.21203/rs.3.rs-5626097/v1", "name": "item", "description": "10.21203/rs.3.rs-5626097/v1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.21203/rs.3.rs-5626097/v1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-03-17T00:00:00Z"}}, {"id": "10.2134/jeq2005.0166", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:19:49Z", "type": "Journal Article", "created": "2006-07-07", "description": "ABSTRACT<p>No\uffe2\uff80\uff90till cropping can increase soil C stocks and aggregation but patterns of long\uffe2\uff80\uff90term changes in N2O emissions, soil N availability, and crop yields still need to be resolved. We measured soil C accumulation, aggregation, soil water, N2O emissions, soil inorganic N, and crop yields in till and no\uffe2\uff80\uff90till corn\uffe2\uff80\uff93soybean\uffe2\uff80\uff93wheat rotations between 1989 and 2002 in southwestern Michigan and investigated whether tillage effects varied over time or by crop. Mean annual NO3\uffe2\uff88\uff92concentrations in no\uffe2\uff80\uff90till were significantly less than in conventional till in three of six corn years and during one year of wheat production. Yields were similar in each system for all 14 years but three, during which yields were higher in no\uffe2\uff80\uff90till, indicating that lower soil NO3\uffe2\uff88\uff92concentrations did not result in lower yields. Carbon accumulated in no\uffe2\uff80\uff90till soils at a rate of 26 g C m\uffe2\uff88\uff922yr\uffe2\uff88\uff921over 12 years at the 0\uffe2\uff80\uff90 to 5\uffe2\uff80\uff90cm soil depth. Average nitrous oxide emissions were similar in till (3.27 \uffc2\uffb1 0.52 g N ha d\uffe2\uff88\uff921) and no\uffe2\uff80\uff90till (3.63 \uffc2\uffb1 0.53 g N ha d\uffe2\uff88\uff921) systems and were sufficient to offset 56 to 61% of the reduction in CO2equivalents associated with no\uffe2\uff80\uff90till C sequestration. After controlling for rotation and environmental effects by normalizing treatment differences between till and no\uffe2\uff80\uff90till systems we found no significant trends in soil N, N2O emissions, or yields through time. In our sandy loam soils, no\uffe2\uff80\uff90till cropping enhances C storage, aggregation, and associated environmental processes with no significant ecological or yield tradeoffs.</p>", "keywords": ["Crops", " Agricultural", "2. Zero hunger", "Michigan", "Time Factors", "Nitrogen", "Nitrous Oxide", "04 agricultural and veterinary sciences", "Biogeochemistry", "Carbon Dioxide", "15. Life on land", "Carbon", "6. Clean water", "Soil", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Ecosystem", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.2134/jeq2005.0166"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Environmental%20Quality", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2134/jeq2005.0166", "name": "item", "description": "10.2134/jeq2005.0166", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2134/jeq2005.0166"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2006-07-01T00:00:00Z"}}, {"id": "10.3929/ethz-b-000648810", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-16T16:20:51Z", "type": "Journal Article", "title": "Transformation of jarosite and iron oxyhydroxides in acid sulfate paddy soils", "description": "Open AccessMinerals containing Fe are ubiquitous in soils. By providing an abundance of sites for the sorption and incorporation of major and trace elements, Fe minerals can govern the fate and behaviour of numerous pollutants and nutrients in soils. Furthermore, the reactivity of Fe in redox-dynamic soils produces a web of Fe mineral transformation processes with broad consequences for element cycling. The importance of Fe cycling is no exception in acid sulfate soils, although the high sulfur and low pH conditions produce unique Fe mineral transformation processes and compositions. In acid sulfate soils, jarosite, an Fe-K hydroxysulfate mineral, and ferrihydrite, a common short-range-ordered Fe oxyhydroxide mineral, play a central role in the pedological development of active and post-active acid sulfate soils. Soil pH and the dynamics of metals, such as aluminium, are key to understanding the toxicity of acid sulfate soils and can be directly influenced by jarosite and ferrihydrite transformation processes.   Although the transformation of Fe minerals is a key component of biogeochemical processes in redox-active soils, the variables that control the rates and pathways of Fe mineral transformations in soil remain uncertain. The uncertainty arises from the difficulty of tracing molecular processes within a matrix of diverse soil components. Iron minerals are regularly characterised in soils, but the processes that explain the Fe mineral composition of soils cannot be easily resolved. An alternative approach is to perform simplified experiments, such as mixed mineral suspension experiments, under controlled laboratory conditions, to test the effect of individual variables. These systems often use synthetic minerals, although relatively pure jarosite may also be isolated from soils and tested in mixed suspension experiments. While useful to derive mechanistic understanding, the measured outcomes of mixed suspension experiments may not represent the rates and products of transformations that occur in soils.  Therefore, the objective of this thesis was to gain new understanding of the stability and transformation of jarosite and ferrihydrite in acid sulfate soils by developing novel experimental techniques to follow the transformation of synthetic jarosite and ferrihydrite directly in soils. The central theme of the thesis is the comparison of jarosite and aluminium-substituted jarosite transformation in experimental media of increasing complexity. The experiments are performed under conditions that are relevant to rice paddy soils because of the importance of rice in global food production, and the unique management of rice paddies whereby regular flooding during the growing season produces distinct redox cycles. In Thailand, large areas of the Chao Phraya River delta are cultivated as rice paddies despite being acid sulfate soils, providing a suitable site to observe the effects of regular redox cycling on the biogeochemistry of Fe minerals in acid sulfate soils.  The thesis begins with characterisation of synthetic and natural jarosite mineral composition and reactivity. Spectroscopic techniques (Raman spectroscopy, M\u00f6ssbauer spectroscopy and Energy-dispersive X-ray spectrometry) and X-ray diffraction (XRD) were used to assess the element substitution of mineral samples from two jarosite-alunite synthetic solid solution series. The same characterisation techniques were then applied to a sample of jarosite from an acid sulfate soil in Thailand has a natural Al-for-Fe substitution. The mineral characterisation was followed by a transformation experiment in a mixed-suspension system, similar to experimental designs that have been previously used to study mineral transformation processes. The experiment followed the transformation of the natural jarosite sample from an acid sulfate soil in Thailand and three jarosite samples with variable amounts of Al substitution. The reaction solution mimicked the pH (circumneutral) and Fe(II) content (up to 1:1 ratio of Fe(II) in solution to Fe(III) in solids) of flooded acid sulfate soils. Furthermore, using a 57Fe tracer, the simultaneous transformation processes that explained the distribution of mineral products could be resolved from one another. The transformation experiment revealed the relative reactivity of the minerals in the presence of Fe(II), and created a baseline that could be used to compare traditional mixed-suspension experiments with transformations in complex media such as soil.   To advance mineral transformation experiments towards studies in which transformation processes may be followed within a soil matrix, several novel techniques were developed. In a first step, ferrihydrite was incubated for up to twelve weeks in microcosms, each containing 300 g of 5 mM CaCl2 solution and 250 g of one of five paddy soils. The ferrihydrite was buried in the soil within a mesh bag (polyethel terephthalate, 51 \u03bcm pores, 30 mm x 12 mm x 3 mm) that allowed free contact between the synthetic minerals and the pore water, but separated the minerals from direct contact with the soil matrix. The mineral products of the transformation were identified and quantified by Rietveld fitting of XRD patterns. Further, the spatial arrangements of the ferrihydrite and transformation products were measured after two weeks by Raman spectroscopy, which could be used to assess the effects of pore water chemistry and diffusion processes on mineral transformation in the mesh bags. The second step involved measuring jarosite and Al-substituted jarosite transformation in flooded topsoil and subsoils from a rice paddy located on the Bangkok Plain in Central Thailand using an adaptation of the mesh bag method. To test the effect of pore water on the transformation of jarosite in soil, mesh bags were filled with synthetic jarosite and aluminium-jarosite and incubated in topsoils and subsoils, both in laboratory mesocosms and directly in the field. Then, the effect of the soil matrix was tested by completing a parallel experiment using mesh bags containing soil that was pre-enriched with synthetic 57Fe-labelled jarosite and aluminium-substituted jarosite. To facilitate the deployment and collection of small mesh bags in large soil volumes, the mesh bags were inserted into soils using custom-designed 3D-printed sample holders. At three timepoints within twelve weeks, one set of mesh bags were removed from the soil. Transformation products were identified and quantified in the pure jarosite and aluminium-jarosite mesh bags using Rietveld fitting of XRD patterns, while the fate of the 57Fe in enriched soil mesh bags was traced using 57Fe M\u00f6ssbauer spectroscopy.   Performing experiments in increasingly complex media provides an insight into the effect of experimental design on the observation of Fe mineral transformations and provides new information regarding the transformation rates and pathways of jarosite and ferrihydrite within full complexity of soil media. Indeed, this thesis demonstrates that the complex chemistry, biological activity, and physical arrangement of components in the soil have strong effects on the rate and products of jarosite and ferrihydrite transformation processes. The transformation of jarosite and Al-substituted jarosite in mixed-suspension experiments presented in this thesis, in agreement with previous mixed-suspension experiments on both jarosite and ferrihydrite, occurred within a matter of hours. By contrast, the rate of ferrihydrite, jarosite and Al-jarosite transformation in soil pore and in direct contact with the soil matrix occurred over the course of several weeks or months. In the ferrihydrite mesh bags, slow ferrihydrite transformation kinetics on the outer rim of the mesh bag, and deep in the core of the mesh bag, indicated that the sorption of chemical components of soil pore water and diffusion limitations of Fe(II) in pore water could be reasons for the slower rates of transformation in soil. In addition, both Al-for-Fe substitution and Fe(II) concentration in solution were important factors that altered the rate of mineral transformation.  The different incubation conditions for jarosite and Al-jarosite also altered the products of the transformation. Whereas the hydrolysis of jarosite in the absence of Fe(II) resulted primarily in the formation of ferrihydrite, jarosite transformation in the presence of Fe(II) led to ferrihydrite, goethite and lepidocrocite formation. The Fe oxyhydroxide products were consistent with Fe(II)-catalysed transformation, and Fe(II)-catalysed recrystallisation of jarosite may have occurred concurrently. Aluminium-for-iron substitution hindered the formation of lepidocrocite formation in favour of ferrihydrite and goethite. Similar product phases occurred when jarosite and Al-jarosite were reacted with pore water from acid sulfate soils, indicating that similar transformation pathways may define the mineral products of jarosite transformations when the jarosite occurs as accumulations of pure mineral in soil. However, non- or poorly crystalline phases predominated in the transformation products when jarosite or Al-jarosite were incubated in direct contact with the soil matrix, indicating that the transformation of jarosite under these circumstances was governed by different pathways and processes.  The new insights into the transformation of ferrihydrite, jarosite and Al-jarosite in acid sulfate soils demonstrate that phases previously considered meta-stable may participate in the biogeochemistry of soil over period of several months. In the context of rice cultivation, the transformation processes may affect the biogeochemistry of the soils throughout the growing season. The formation of poorly crystalline minerals following the transformation in flooded soils may have positive consequences on the sequestration of other trace and major elements that were associated with the ferrihydrite, jarosite or Al-jarosite prior to the transformation. However, the stabilisation of reduced Fe in the soil matrix may have the opposite effect, promoting the mobility of other ions in solution. The methods used to incubate jarosite and ferrihydrite in soils are easily adaptable to new experimental questions involving the behaviour of Fe-bearing minerals in soil. Therefore, the findings open up a new class of experiments within environmental mineralogy and biogeochemistry, that can help to uncover the processes that occur in the environment and explain the natural variation in the composition of Fe phases in soil.", "keywords": ["jarosite", "iron biogeochemistry", "soil chemistry", "acid sulfate soil", "laboratory study", "ferrihydrite", "soil", "soil incubation", "redox chemistry", "goethite", "iron minerals", "2. Zero hunger", "soil biogeochemistry", "info:eu-repo/classification/ddc/550", "M\u00f6ssbauer spectroscopy", "rice paddy soil", "15. Life on land", "6. Clean water", "Earth sciences", "lepidocrocite", "field study", "13. Climate action", "Raman spectroscopy", "iron oxyhydroxide", "mineral transformation", "iron minerals; mineral transformation; soil; soil chemistry; soil mineralogy; soil biogeochemistry; redox chemistry; iron biogeochemistry; acid sulfate soil; rice paddy soil; jarosite; ferrihydrite; goethite; lepidocrocite; iron oxyhydroxide; M\u00f6ssbauer spectroscopy; Raman spectroscopy; field study; laboratory study; soil incubation", "soil mineralogy"], "contacts": [{"organization": "Grigg, Andrew R.C.", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.3929/ethz-b-000648810"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Thesis/Dissertation", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3929/ethz-b-000648810", "name": "item", "description": "10.3929/ethz-b-000648810", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3929/ethz-b-000648810"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-01T00:00:00Z"}}, {"id": "10.2136/sssaj2002.1311", "type": "Feature", "geometry": null, "properties": {"license": "Closed Access", "updated": "2026-04-16T16:19:56Z", "type": "Journal Article", "created": "2010-07-27", "description": "<p>Soil structural degradation is common in intensively cultivated ecosystems due to the depletion of soil organic matter (SOM). We investigated the mechanisms by which different frequencies of organic amendment application and rotation crops restore C, N, and aggregation in gravelly loam soils used for potato production. A single amendment application [FIRST; 22 Mg ha\uffe2\uff88\uff921 compost and 45 Mg ha\uffe2\uff88\uff921 beef cattle (Bos taurus L.) manure] did not affect total C in 1996 and increased it by 28% in 1997 relative to unamended plots (NONE); light fraction (LF) C accounted for 56% of this increase. Plots in which amendment was suspended for 1 yr (SASP) following 4 or 5 yr of annual application had more total C in 1996 (28%) and 1997 (46%) relative to NONE. A green manure crop consisting of oat (Avena sativa \uffe2\uff80\uff98Porter\uffe2\uff80\uff99), pea (Pisum sativum \uffe2\uff80\uff98Trapper\uffe2\uff80\uff99), and hairy vetch (Vicia villosa Roth) grown in 2\uffe2\uff80\uff90yr rotation with potatoes (Solanum tuberosum L.) increased soil C in 1997 (25.9 vs. 23.9 g kg\uffe2\uff88\uff921), LF properties in 1996 and 1997, and water soluble carbohydrates (WSC) on several sample dates relative to an oat rotation crop. Large aggregate (2\uffe2\uff80\uff936.5 mm) stability in 1996 and 1997 and medium aggregate (1\uffe2\uff80\uff932 mm) stability in 1997 were increased by FIRST relative to NONE. Total soil C was more strongly related to medium (r = 0.65 in 1997) and large (r = 0.51 in 1997) aggregate stability than LF or water soluble carbohydrate fractions. Compost and manure influences occurred rapidly and were persistent, demonstrating that annual applications are not necessary to reverse soil degradation.</p>", "keywords": ["2. Zero hunger", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "Biogeochemistry", "15. Life on land", "6. Clean water"], "contacts": [{"organization": "Grandy, A. Stuart, Porter, Gregory A., Erich, M. Susan,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.2136/sssaj2002.1311"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Science%20Society%20of%20America%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2136/sssaj2002.1311", "name": "item", "description": "10.2136/sssaj2002.1311", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2136/sssaj2002.1311"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2002-07-01T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=biogeochemistry&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=biogeochemistry&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=biogeochemistry&", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=biogeochemistry&offset=50", "hreflang": "en-US"}], "numberMatched": 122, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-04-17T05:27:12.718858Z"}