{"type": "FeatureCollection", "features": [{"id": "10.1002/ajb2.1625", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-19T16:14:12Z", "type": "Journal Article", "created": "2021-03-19", "title": "Phylogeography of a gypsum endemic plant across its entire distribution range in the western Mediterranean", "description": "PREMISE<p>Gypsum soils in the Mediterranean Basin house large numbers of edaphic specialists that are adapted to stressful environments. The evolutionary history and standing genetic variation of these taxa have been influenced by the geological and paleoclimatic complexity of this area and the long\uffe2\uff80\uff90standing effect of human activities. However, little is known about the origin of Mediterranean gypsophiles and the factors affecting their genetic diversity and population structure.</p>METHODS<p>Using phylogenetic and phylogeographic approaches based on microsatellites and sequence data from nuclear and chloroplast regions, we evaluated the divergence time, genetic diversity, and population structure of 27 different populations of the widespread Iberian gypsophile Lepidium subulatum throughout its entire geographic range.</p>RESULTS<p>Lepidium subulatum diverged from its nearest relatives ~3 million years ago, and ITS and psbA/matK trees supported the monophyly of the species. These results suggest that both geological and climatic changes in the region around the Plio\uffe2\uff80\uff90Pleistocene promoted its origin, compared to other evolutionary processes. We found high genetic diversity in both nuclear and chloroplast markers, but a greater population structure in the chloroplast data. These results suggest that while seed dispersal is limited, pollen flow may be favored by the presence of numerous habitat patches that enhance the movement of pollinators.</p>CONCLUSIONS<p>Despite being an edaphic endemic, L. subulatum possesses high genetic diversity probably related to its relatively old age and high population sizes across its range. Our study highlights the value of using different markers to fully understand the phylogeographic history of plant species.</p", "keywords": ["0301 basic medicine", "Phylogeography", "0303 health sciences", "03 medical and health sciences", "Haplotypes", "DNA", " Chloroplast", "Genetic Variation", "cpDNA; genetic diversity; gypsophiles; Lepidium subulatum; nuclear microsatellites; phylogeography; pollen flow; population structure; seed dispersal.", "15. Life on land", "Calcium Sulfate", "Phylogeny"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1002/ajb2.1625"}, {"href": "https://doi.org/10.1002/ajb2.1625"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/American%20Journal%20of%20Botany", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ajb2.1625", "name": "item", "description": "10.1002/ajb2.1625", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ajb2.1625"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-03-01T00:00:00Z"}}, {"id": "10.1016/j.heliyon.2024.e38922", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-19T16:15:46Z", "type": "Journal Article", "created": "2024-10-04", "title": "Development of a graphene field effect transistor-based immersible biosensor for immunodetection of the birch pollen allergen Bet v 1 in air samples", "description": "Pollen traps, the current gold standard to determine pollen load and thereby the allergy season, are not sufficient to determine the allergenic risk. Therefore, the establishment of highly sensitive assays for allergen measurement is of highest interest. Herein, a graphene field-effect transistor (GFET) was constructed on an interdigitated electrodes chip to develop an immersible biosensor, which was used to detect the major birch pollen allergen Bet v 1. Graphene was wet-transferred on interdigitated electrodes that contain a reference electrode used as a liquid gate in the GFET. Using a standard ELISA protocol, two different anti-Bet v 1 antibodies were chosen and immobilized on graphene for the specific capture of the target allergen. The sensitivity of the GFET biosensor was evaluated using a standard Ag/AgCl liquid gate electrode and a reference electrode when the chip was immersed in Bet v 1-containing solutions. The results showed a higher performance and sensitivity for Bet v 1 detection compared to a mediator release method, one of the most sensitive assays for allergen detection. Compared with conventional methods of allergen detection, these immersible biosensors significantly improved the speed and level of detection providing the foundation of a point-of-need platform for in-field application. Furthermore, the proposed technique provides both a new biosensor for allergen detection and a strategy for designing low-cost integrated biosensors.", "keywords": ["Social sciences (General)", "H1-99", "Q1-390", "Science (General)", "Graphene field effect transistor", "Allergen detection", "Birch pollen", "Air sampling", "Biosensor", "Research Article"], "contacts": [{"organization": "Stefan Jari\u0107, Mario Wenger, Ivan Bobrinetskiy, Andr\u00e9 Stapelfeldt, Glorismer Pena-Amelunxen, Branko \u0160ikoparija, Lorenz Aglas,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1016/j.heliyon.2024.e38922"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Heliyon", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.heliyon.2024.e38922", "name": "item", "description": "10.1016/j.heliyon.2024.e38922", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.heliyon.2024.e38922"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-10-01T00:00:00Z"}}, {"id": "10.3390/plants10040783", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-09-19T16:18:49Z", "type": "Journal Article", "created": "2021-04-19", "title": "A Novel Protein Hydrolysate-Based Biostimulant Improves Tomato Performances under Drought Stress", "description": "<p>Abiotic stresses adversely affect crop production causing yield reductions in important crops, including tomato (Solanum lycopersicum L.). Among the different abiotic stresses, drought is considered to be the most critical one, since limited water availability negatively impacts plant growth and development, especially in arid and semi-arid areas. The aim of this study was to understand how biostimulants may interact with critical physiological response mechanisms in tomato under limited water availability and to define strategies to improve tomato performances under drought stress. We investigated the physiological responses of the tomato genotype \uffe2\uff80\uff98E42\uffe2\uff80\uff99 grown in open fields under optimal conditions (100% irrigation) and limited water availability (50% irrigation) treated or not with a novel protein hydrolysate-based biostimulant (CycoFlow, Agriges, BN, Italy). Plants treated with the protein hydrolysate showed a better water status and pollen viability, which also resulted in higher yield under drought stress compared to untreated plants. The treatment with the biostimulant had also an effect on antioxidant contents and activity in leaves and fruits depending on the level of irrigation provided. Altogether, these results indicate that the application of protein hydrolysates on tomato improved plant performances under limited water availability and in different experimental fields.</p>", "keywords": ["0301 basic medicine", "2. Zero hunger", "Yield", "Proline", "Fruit set", "Fruit set; Glycine betaine; Pollen viability; Proline; Water shortage; Yield", "Botany", "pollen viability", "15. Life on land", "yield", "Article", "6. Clean water", "Pollen viability", "glycine betaine", "03 medical and health sciences", "Glycine betaine", "water shortage", "QK1-989", "proline", "fruit set", "Water shortage"]}, "links": [{"href": "http://www.mdpi.com/2223-7747/10/4/783/pdf"}, {"href": "https://www.iris.unina.it/bitstream/11588/864925/1/plants_Francesca_21.pdf"}, {"href": "https://www.mdpi.com/2223-7747/10/4/783/pdf"}, {"href": "https://doi.org/10.3390/plants10040783"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plants", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/plants10040783", "name": "item", "description": "10.3390/plants10040783", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/plants10040783"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-16T00:00:00Z"}}, {"id": "10.5281/zenodo.8164437", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-19T16:20:34Z", "type": "Dataset", "title": "Dinoflagellate cyst and pollen counts in combination with environmental parameters from the northern Gulf of Mexico", "description": "unspecifiedCounts from dinoflagellate cysts and pollen from 21 surface sediments collected from the northern Gulf of Mexico. The dataset also includes the environmental parameters used for the redundancy analysis in the article. Supplement to: Yedema et al., (2023); Dinoflagellate cyst and pollen assemblages as tracers for marine productivity and river input in the northern Gulf of Mexico (https://doi.org/10.5194/jm-42-257-2023)", "keywords": ["nutrient concentration", "Gulf of Mexico", "NPP", "net primary production", "15. Life on land", "dinoflagellate cyst", "SSS", "SST", "sea surface temperature", "dinocyst", "pollen", "Mississippi river", "14. Life underwater", "sea surface salinity", "palynology", "Atchafalaya river"], "contacts": [{"organization": "Yedema, Yord W., Donders, Timme, Peterse, Francien, Sangiorgi, Francesca,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.8164437"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.8164437", "name": "item", "description": "10.5281/zenodo.8164437", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.8164437"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-12-04T00:00:00Z"}}, {"id": "3137300487", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-19T16:22:11Z", "type": "Journal Article", "created": "2021-03-19", "title": "Phylogeography of a gypsum endemic plant across its entire distribution range in the western Mediterranean", "description": "PREMISE<p>Gypsum soils in the Mediterranean Basin house large numbers of edaphic specialists that are adapted to stressful environments. The evolutionary history and standing genetic variation of these taxa have been influenced by the geological and paleoclimatic complexity of this area and the long\uffe2\uff80\uff90standing effect of human activities. However, little is known about the origin of Mediterranean gypsophiles and the factors affecting their genetic diversity and population structure.</p>METHODS<p>Using phylogenetic and phylogeographic approaches based on microsatellites and sequence data from nuclear and chloroplast regions, we evaluated the divergence time, genetic diversity, and population structure of 27 different populations of the widespread Iberian gypsophile Lepidium subulatum throughout its entire geographic range.</p>RESULTS<p>Lepidium subulatum diverged from its nearest relatives ~3 million years ago, and ITS and psbA/matK trees supported the monophyly of the species. These results suggest that both geological and climatic changes in the region around the Plio\uffe2\uff80\uff90Pleistocene promoted its origin, compared to other evolutionary processes. We found high genetic diversity in both nuclear and chloroplast markers, but a greater population structure in the chloroplast data. These results suggest that while seed dispersal is limited, pollen flow may be favored by the presence of numerous habitat patches that enhance the movement of pollinators.</p>CONCLUSIONS<p>Despite being an edaphic endemic, L. subulatum possesses high genetic diversity probably related to its relatively old age and high population sizes across its range. Our study highlights the value of using different markers to fully understand the phylogeographic history of plant species.</p", "keywords": ["0301 basic medicine", "Phylogeography", "0303 health sciences", "03 medical and health sciences", "Haplotypes", "DNA", " Chloroplast", "Genetic Variation", "cpDNA; genetic diversity; gypsophiles; Lepidium subulatum; nuclear microsatellites; phylogeography; pollen flow; population structure; seed dispersal.", "15. Life on land", "Calcium Sulfate", "Phylogeny"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1002/ajb2.1625"}, {"href": "https://doi.org/3137300487"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/American%20Journal%20of%20Botany", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "3137300487", "name": "item", "description": "3137300487", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/3137300487"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-03-01T00:00:00Z"}}, {"id": "33740271", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-19T16:22:19Z", "type": "Journal Article", "created": "2021-03-19", "title": "Phylogeography of a gypsum endemic plant across its entire distribution range in the western Mediterranean", "description": "PREMISE<p>Gypsum soils in the Mediterranean Basin house large numbers of edaphic specialists that are adapted to stressful environments. The evolutionary history and standing genetic variation of these taxa have been influenced by the geological and paleoclimatic complexity of this area and the long\uffe2\uff80\uff90standing effect of human activities. However, little is known about the origin of Mediterranean gypsophiles and the factors affecting their genetic diversity and population structure.</p>METHODS<p>Using phylogenetic and phylogeographic approaches based on microsatellites and sequence data from nuclear and chloroplast regions, we evaluated the divergence time, genetic diversity, and population structure of 27 different populations of the widespread Iberian gypsophile Lepidium subulatum throughout its entire geographic range.</p>RESULTS<p>Lepidium subulatum diverged from its nearest relatives ~3 million years ago, and ITS and psbA/matK trees supported the monophyly of the species. These results suggest that both geological and climatic changes in the region around the Plio\uffe2\uff80\uff90Pleistocene promoted its origin, compared to other evolutionary processes. We found high genetic diversity in both nuclear and chloroplast markers, but a greater population structure in the chloroplast data. These results suggest that while seed dispersal is limited, pollen flow may be favored by the presence of numerous habitat patches that enhance the movement of pollinators.</p>CONCLUSIONS<p>Despite being an edaphic endemic, L. subulatum possesses high genetic diversity probably related to its relatively old age and high population sizes across its range. Our study highlights the value of using different markers to fully understand the phylogeographic history of plant species.</p", "keywords": ["0301 basic medicine", "Phylogeography", "0303 health sciences", "03 medical and health sciences", "Haplotypes", "DNA", " Chloroplast", "Genetic Variation", "cpDNA; genetic diversity; gypsophiles; Lepidium subulatum; nuclear microsatellites; phylogeography; pollen flow; population structure; seed dispersal.", "15. Life on land", "Calcium Sulfate", "Phylogeny"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1002/ajb2.1625"}, {"href": "https://doi.org/33740271"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/American%20Journal%20of%20Botany", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "33740271", "name": "item", "description": "33740271", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/33740271"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-03-01T00:00:00Z"}}, {"id": "PMC11530824", "type": "Feature", "geometry": null, "properties": {"updated": "2026-09-19T16:23:34Z", "type": "Journal Article", "created": "2024-10-04", "title": "Development of a graphene field effect transistor-based immersible biosensor for immunodetection of the birch pollen allergen Bet v 1 in air samples", "description": "Pollen traps, the current gold standard to determine pollen load and thereby the allergy season, are not sufficient to determine the allergenic risk. Therefore, the establishment of highly sensitive assays for allergen measurement is of highest interest. Herein, a graphene field-effect transistor (GFET) was constructed on an interdigitated electrodes chip to develop an immersible biosensor, which was used to detect the major birch pollen allergen Bet v 1. Graphene was wet-transferred on interdigitated electrodes that contain a reference electrode used as a liquid gate in the GFET. Using a standard ELISA protocol, two different anti-Bet v 1 antibodies were chosen and immobilized on graphene for the specific capture of the target allergen. The sensitivity of the GFET biosensor was evaluated using a standard Ag/AgCl liquid gate electrode and a reference electrode when the chip was immersed in Bet v 1-containing solutions. The results showed a higher performance and sensitivity for Bet v 1 detection compared to a mediator release method, one of the most sensitive assays for allergen detection. Compared with conventional methods of allergen detection, these immersible biosensors significantly improved the speed and level of detection providing the foundation of a point-of-need platform for in-field application. 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