{"type": "FeatureCollection", "features": [{"id": "10.1111/j.1757-1707.2012.01174.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:21Z", "type": "Journal Article", "created": "2012-05-15", "title": "Modelling The Carbon And Nitrogen Balances Of Direct Land Use Changes From Energy Crops In Denmark: A Consequential Life Cycle Inventory", "description": "Abstract<p>This paper addresses the conversion of Danish agricultural land from food/feed crops to energy crops. To this end, a life cycle inventory, which relates the input and output flows from and to the environment of 528 different crop systems, is built and described. This includes seven crops (annuals and perennials), two soil types (sandy loam and sand), two climate types (wet and dry), three initial soil carbon level (high, average, low), two time horizons for soil carbon changes (20 and 100\uffc2\uffa0years), two residues management practices (removal and incorporation into soil) as well as three soil carbon turnover rate reductions in response to the absence of tillage for some perennial crops (0%, 25%, 50%). For all crop systems, nutrient balances, balances between above\uffe2\uff80\uff90 and below\uffe2\uff80\uff90ground residues, soil carbon changes, biogenic carbon dioxide flows, emissions of nitrogen compounds and losses of macro\uffe2\uff80\uff90 and micronutrients are presented. The inventory results highlight Miscanthus as a promising energy crop, indicating it presents the lowest emissions of nitrogen compounds, the highest amount of carbon dioxide sequestrated from the atmosphere, a relatively high carbon turnover efficiency and allows to increase soil organic carbon. Results also show that the magnitude of these benefits depends on the harvest season, soil types and climatic conditions. Inventory results further highlight winter wheat as the only annual crop where straw removal for bioenergy may be sustainable, being the only annual crop not involving losses of soil organic carbon as a result of harvesting the straw. This, however, is conditional to manure application, and is only true on sandy soils.</p>", "keywords": ["2. Zero hunger", "direct land use changes", "carbon", "straw", "0211 other engineering and technologies", "02 engineering and technology", "bioenergy", "15. Life on land", "7. Clean energy", "life cycle inventory", "nitrogen", "12. Responsible consumption", "13. Climate action", "0202 electrical engineering", " electronic engineering", " information engineering"]}, "links": [{"href": "https://doi.org/10.1111/j.1757-1707.2012.01174.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1757-1707.2012.01174.x", "name": "item", "description": "10.1111/j.1757-1707.2012.01174.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1757-1707.2012.01174.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-05-15T00:00:00Z"}}, {"id": "2117/407828", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:27:55Z", "type": "Journal Article", "created": "2024-05-07", "title": "Observationally constrained regional variations of shortwave absorption by iron oxides emphasize the cooling effect of dust", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>Abstract. The composition of soil dust aerosols derives from the mineral abundances in the parent soils that vary across dust source regions. Nonetheless, Earth system models (ESMs) have traditionally represented mineral dust as a globally homogeneous species. The growing interest in modeling dust mineralogy, facilitated by the recognized sensitivity of the dust climate impacts to composition, has motivated state-of-the-art ESMs to incorporate the mineral speciation of dust along with its effect upon the dust direct radiative effect (DRE). In this work, we enable the NASA Goddard Institute for Space Studies ModelE2.1 to calculate the shortwave (SW) DRE accounting for the regionally varying soil mineralogy. Mineral\u2013radiation interaction at solar wavelengths is calculated according to two alternative coupling schemes: (1)\u00a0external mixing of three mineral components that are optically distinguished, one of which contains embedded iron oxides; (2)\u00a0a single internal mixture of all dust minerals with a dynamic fraction of iron oxides that varies regionally and temporally. We link dust absorption to the fractional mass of iron oxides based on recent chamber measurements using natural dust aerosol samples. We show that coupled mineralogy overall enhances the scattering by dust, and thus the global cooling, compared to our control run with globally uniform composition. According to the external mixing scheme, the SW DRE at the top of atmosphere (TOA) changes from \u22120.25 to -0.30Wm-2, corresponding to a change in the net DRE, including the longwave effect, from \u22120.08 to -0.12Wm-2. The cooling increase is accentuated when the internal mixing scheme is configured: the SW DRE at the TOA becomes -0.34Wm-2 with a net DRE of -0.15Wm-2. The varying composition modifies the regional distribution of single scattering albedo (SSA), whose variations in specific regions can be remarkable (above 0.03) and significantly modify the regional SW DRE. Evaluation against the AErosol RObotic NETwork (AERONET) shows that explicit representation of soil mineralogy and its regional variations reduces the low bias of model dust SSA while improving the range of variability across stations and calendar months. Despite these improvements, the moderate spatiotemporal correlation with AERONET reveals remaining modeling challenges and the need for more accurate measurements of mineral fractions in soils.</p></article>", "keywords": ["[SDE] Environmental Sciences", "Mineral dusts", "Radiation", "Physics", "QC1-999", "Cicle hidrol\u00f2gic", "15. Life on land", "Aerosols atmosf\u00e8rics", "01 natural sciences", "Radiaci\u00f3", "Chemistry", "13. Climate action", "\u00c0rees tem\u00e0tiques de la UPC::Enginyeria civil::Geologia::Mineralogia", "Pols minerals", "QD1-999", "Atmospheric aerosol", "\u00c0rees tem\u00e0tiques de la UPC::Desenvolupament hum\u00e0 i sostenible::Degradaci\u00f3 ambiental", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://acp.copernicus.org/articles/24/5337/2024/acp-24-5337-2024.pdf"}, {"href": "https://doi.org/2117/407828"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Atmospheric%20Chemistry%20and%20Physics", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "2117/407828", "name": "item", "description": "2117/407828", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/2117/407828"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-06-05T00:00:00Z"}}, {"id": "10.1111/j.1757-1707.2010.01033.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:20Z", "type": "Journal Article", "created": "2010-02-03", "title": "The Potential Of Miscanthus To Sequester Carbon In Soils: Comparing Field Measurements In Carlow, Ireland To Model Predictions", "description": "Abstract<p>Growing bioenergy crops such as Miscanthus has the potential to mitigate atmospheric carbon dioxide emissions by the replacement of fossil fuels and by storing carbon (C) in the soil due to land use change. Here we compare direct measurements of soil organic C fractions made in Carlow (Ireland) to model predictions made by RothC and a cohort model. Our results show that when Miscanthus is grown on land previously under arable agriculture, the soil organic C will increase to a level above that of native pasture, as Miscanthus organic material is shown to have a slow decomposition rate. In addition we demonstrate that for measured organic C, fractions of different lability are similar to the C pools used in RothC. Using the model predictions from RothC and Miscanthus yields from MISCANFOR, we predict that in Ireland, changing the land use from arable to Miscanthus plantations has the potential to store between 2 and 3\uffe2\uff80\uff83Mg\uffe2\uff80\uff83C\uffe2\uff80\uff83ha\uffe2\uff88\uff921\uffe2\uff80\uff83y\uffe2\uff88\uff921 depending on the crop yield and the initial soil organic C level.</p>", "keywords": ["2. Zero hunger", "550", "Miscanthus", "04 agricultural and veterinary sciences", "15. Life on land", "Soil carbon", "7. Clean energy", "01 natural sciences", "Energy crops", "Modelling", "13. Climate action", "Greenhouse gas emissions", "Climate change", "0401 agriculture", " forestry", " and fisheries", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/j.1757-1707.2010.01033.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1757-1707.2010.01033.x", "name": "item", "description": "10.1111/j.1757-1707.2010.01033.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1757-1707.2010.01033.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-12-01T00:00:00Z"}}, {"id": "10.1111/j.1751-8369.2010.00154.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:20Z", "type": "Journal Article", "created": "2010-03-26", "title": "Cold-Season Soil Respiration In Response To Grazing And Warming In High-Arctic Svalbard", "description": "Open AccessThis study was funded by: the University Centre in Svalbard, Longyearbyen, Norway; Oticon Fonden; Loef\ufb02er; Stennsbys Travel Fond; and the Danish Natural Science Research Council.", "keywords": ["Spitsbergen", "SOC turnover", "13. Climate action", "Tundra vegetation", "0401 agriculture", " forestry", " and fisheries", "Soil respiration", "04 agricultural and veterinary sciences", "Warming", "15. Life on land", "Goose grazing"]}, "links": [{"href": "https://doi.org/10.1111/j.1751-8369.2010.00154.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Polar%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1751-8369.2010.00154.x", "name": "item", "description": "10.1111/j.1751-8369.2010.00154.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1751-8369.2010.00154.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-01-01T00:00:00Z"}}, {"id": "10.1111/j.1752-4598.2012.00202.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:20Z", "type": "Journal Article", "created": "2012-04-04", "title": "Grazing Management In Saltmarsh Ecosystems Drives Invertebrate Diversity, Abundance And Functional Group Structure", "description": "<p>Abstract.\uffe2\uff80\uff82 1.\uffe2\uff80\uff82Saltmarsh conservation management often involves livestock grazing to maximise plant diversity and provide suitable breeding habitat for over\uffe2\uff80\uff90wintering coastal birds. The effect of grazing on invertebrates is rarely quantified, but results from limited studies of terrestrial and coastal grasslands demonstrate greater abundance and species richness in un\uffe2\uff80\uff90grazed grassland.</p><p>2.\uffe2\uff80\uff82The impact of short sward (&lt;8\uffe2\uff80\uff83cm) cattle grazing on the ground dwelling invertebrate community was assessed on an English inter\uffe2\uff80\uff90tidal upper salt marsh using pitfall traps. Abundance, species richness, functional group structure, abundance of coastal specialists, environmental factors that influence invertebrate habitat choice and food web composition were compared for grazed and un\uffe2\uff80\uff90grazed marsh.</p><p>3.\uffe2\uff80\uff82In total, 90\uffe2\uff80\uff83000 invertebrates were sampled. Predatory, zoophagus and detritivorous Coleoptera were significantly more abundant on the un\uffe2\uff80\uff90grazed marsh. In contrast, predatory Hemiptera and Araneae were significantly more abundant on the grazed marsh. Sheet weaver spiders were significantly more abundant on the grazed marsh, foliage running hunters and space web builders more abundant on the un\uffe2\uff80\uff90grazed marsh. Most inter\uffe2\uff80\uff90tidal coastal specialist species exhibited clear habitat preference for the grazed marsh. Total species richness was not significantly different between grazing treatments.</p><p>4.\uffe2\uff80\uff82Linear direct gradient analysis showed that two environmental variables influenced by grazing intensity, soil temperature and vegetation height, significantly explained the composition of invertebrate functional groups. Larger bodied invertebrates dominated the un\uffe2\uff80\uff90grazed food web.</p><p>5.\uffe2\uff80\uff82We conclude that both short sward cattle grazed and un\uffe2\uff80\uff90grazed saltmarsh habitat should be maintained to maximise invertebrate abundance and diversity and provide suitable habitat for coastal specialists.</p>", "keywords": ["0106 biological sciences", "food web", "grasslands", "prey capture method", "15. Life on land", "01 natural sciences", "Coleoptera", "Hemiptera", "spiders", "Araneae", "14. Life underwater", "insects", "body size", "biodiversity"]}, "links": [{"href": "https://doi.org/10.1111/j.1752-4598.2012.00202.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Insect%20Conservation%20and%20Diversity", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1752-4598.2012.00202.x", "name": "item", "description": "10.1111/j.1752-4598.2012.00202.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1752-4598.2012.00202.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-04-04T00:00:00Z"}}, {"id": "10.1111/j.1757-1707.2011.01103.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:21Z", "type": "Journal Article", "created": "2011-04-07", "title": "The Production-Ecological Sustainability Of Cassava, Sugarcane And Sweet Sorghum Cultivation For Bioethanol In Mozambique", "description": "Abstract<p>We present an approach for providing quantitative insight into the production\uffe2\uff80\uff90ecological sustainability of biofuel feedstock production systems. The approach is based on a simple crop\uffe2\uff80\uff90soil model and was used for assessing feedstock from current and improved production systems of cassava for bioethanol. Assessments were performed for a study area in Mozambique, a country considered promising for biomass production. Our focus is on the potential role of smallholders in the production of feedstock for biofuels. We take cassava as the crop for this purpose and compare it with feedstock production on plantations using sugarcane, sweet sorghum and cassava as benchmarks. Production\uffe2\uff80\uff90ecological sustainability was defined by seven indicators related to resource\uffe2\uff80\uff90use efficiency, soil quality, net energy production and greenhouse gas (GHG) emissions. Results indicate that of the assessed systems, sugarcane performed better than cassava, although it requires substantial water for irrigation. Targeted use of nutrient inputs improved sustainability of smallholder cassava. Cassava production systems on more fertile soils were more sustainable than those on less fertile soils; the latter required more external inputs for achieving the same output, affecting most indicators negatively and reducing the feasibility for smallholders. Cassava and sweet sorghum performed similarly. Cassava production requires much more labour per hectare than production of sugarcane or sweet sorghum. Production of bioethanol feedstock on cultivated lands was more sustainable and had potential for carbon sequestration, avoiding GHG emissions from clearing natural vegetation if new land is opened.</p>", "keywords": ["2. Zero hunger", "0211 other engineering and technologies", "02 engineering and technology", "15. Life on land", "7. Clean energy", "term crop response", "nitrogen", "12. Responsible consumption", "fuel ethanol", "residues", "13. Climate action", "fertilizer phosphorus", "11. Sustainability", "0202 electrical engineering", " electronic engineering", " information engineering", "organic-matter", "soils", "zimbabwe", "management", "energy"]}, "links": [{"href": "https://doi.org/10.1111/j.1757-1707.2011.01103.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1757-1707.2011.01103.x", "name": "item", "description": "10.1111/j.1757-1707.2011.01103.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1757-1707.2011.01103.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-04-06T00:00:00Z"}}, {"id": "10.1111/j.1757-1707.2011.01113.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:21Z", "type": "Journal Article", "created": "2011-07-21", "title": "Identifying Grasslands Suitable For Cellulosic Feedstock Crops In The Greater Platte River Basin: Dynamic Modeling Of Ecosystem Performance With 250 M Emodis", "description": "Abstract<p>This study dynamically monitors ecosystem performance (EP) to identify grasslands potentially suitable for cellulosic feedstock crops (e.g., switchgrass) within the Greater Platte River Basin (GPRB). We computed grassland site potential and EP anomalies using 9\uffe2\uff80\uff90year (2000\uffe2\uff80\uff932008) time series of 250\uffc2\uffa0m expedited moderate resolution imaging spectroradiometer Normalized Difference Vegetation Index data, geophysical and biophysical data, weather and climate data, and EP models. We hypothesize that areas with fairly consistent high grassland productivity (i.e., high grassland site potential) in fair to good range condition (i.e., persistent ecosystem overperformance or normal performance, indicating a lack of severe ecological disturbance) are potentially suitable for cellulosic feedstock crop development. Unproductive (i.e., low grassland site potential) or degraded grasslands (i.e., persistent ecosystem underperformance with poor range condition) are not appropriate for cellulosic feedstock development. Grassland pixels with high or moderate ecosystem site potential and with more than 7\uffc2\uffa0years ecosystem normal performance or overperformance during 2000\uffe2\uff80\uff932008 are identified as possible regions for future cellulosic feedstock crop development (ca. 68\uffc2\uffa0000\uffc2\uffa0km2 within the GPRB, mostly in the eastern areas). Long\uffe2\uff80\uff90term climate conditions, elevation, soil organic carbon, and yearly seasonal precipitation and temperature are important performance variables to determine the suitable areas in this study. The final map delineating the suitable areas within the GPRB provides a new monitoring and modeling approach that can contribute to decision support tools to help land managers and decision makers make optimal land use decisions regarding cellulosic feedstock crop development and sustainability.</p>", "keywords": ["2. Zero hunger", "satellite remote sensing", "550", "land management", "04 agricultural and veterinary sciences", "15. Life on land", "ecosystem performance models", "cellulosic feedstock crops", "6. Clean water", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Greater Platte River Basin", "cellulosic biofuel", "weather data", "eMODIS NDVI"]}, "links": [{"href": "https://doi.org/10.1111/j.1757-1707.2011.01113.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1757-1707.2011.01113.x", "name": "item", "description": "10.1111/j.1757-1707.2011.01113.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1757-1707.2011.01113.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-07-21T00:00:00Z"}}, {"id": "10.1111/j.1757-1707.2011.01118.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:21Z", "type": "Journal Article", "created": "2011-09-12", "title": "Energy Balances And Greenhouse Gas Emissions Of Palm Oil Biodiesel In Indonesia", "description": "Abstract<p>This study presents a cradle\uffe2\uff80\uff90to\uffe2\uff80\uff90gate assessment of the energy balances and greenhouse gas (GHG) emissions of Indonesian palm oil biodiesel production, including the stages of land\uffe2\uff80\uff90use change (LUC), agricultural phase, transportation, milling, biodiesel processing, and comparing the results from different farming systems, including company plantations and smallholder plantations (either out growers or independent growers) in different locations in Kalimantan and Sumatra of Indonesia. The findings demonstrate that there are considerable differences between the farming systems and the locations in net energy yields (43.6\uffe2\uff80\uff9349.2\uffc2\uffa0GJ\uffc2\uffa0t\uffe2\uff88\uff921\uffc2\uffa0biodiesel\uffc2\uffa0yr\uffe2\uff88\uff921) as well as GHG emissions (1969.6\uffe2\uff80\uff935626.4\uffc2\uffa0kg\uffc2\uffa0CO2eq\uffc2\uffa0t\uffe2\uff88\uff921 biodiesel\uffc2\uffa0yr\uffe2\uff88\uff921). The output to input ratios are positive in all cases. The largest GHG emissions result from LUC effects, followed by the transesterification, fertilizer production, agricultural production processes, milling, and transportation. Ecosystem carbon payback times range from 11 to 42\uffc2\uffa0years.</p>", "keywords": ["2. Zero hunger", "net energy yield", "palm oil biodiesel", "330", "greenhouse gas emissions", "ecosystem carbon payback time", "0211 other engineering and technologies", "02 engineering and technology", "15. Life on land", "7. Clean energy", "energy balances", "630", "12. Responsible consumption", "land-use change", "13. Climate action", "11. Sustainability", "0202 electrical engineering", " electronic engineering", " information engineering", "farming systems"]}, "links": [{"href": "https://doi.org/10.1111/j.1757-1707.2011.01118.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1757-1707.2011.01118.x", "name": "item", "description": "10.1111/j.1757-1707.2011.01118.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1757-1707.2011.01118.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-09-12T00:00:00Z"}}, {"id": "10.1111/j.1757-1707.2011.01132.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:21Z", "type": "Journal Article", "created": "2011-11-22", "title": "Consequences Of Field N2o Emissions For The Environmental Sustainability Of Plant-Based Biofuels Produced Within An Organic Farming System", "description": "Abstract<p>One way of reducing the emissions of fossil fuel\uffe2\uff80\uff90derived carbon dioxide (CO2) is to replace fossil fuels with biofuels produced from agricultural biomasses or residuals. However, cultivation of soils results in emission of other greenhouse gases (GHGs), especially nitrous oxide (N2O). Previous studies on biofuel production systems showed that emissions of N2O may counterbalance a substantial part of the global warming reduction, which is achieved by fossil fuel displacement. In this study, we related measured field emissions of N2O to the reduction in fossil fuel\uffe2\uff80\uff90derived CO2, which was obtained when agricultural biomasses were used for biofuel production. The analysis included five organically managed feedstocks (viz. dried straw of sole cropped rye, sole cropped vetch and intercropped rye\uffe2\uff80\uff93vetch, as well as fresh grass\uffe2\uff80\uff93clover and whole crop maize) and three scenarios for conversion of biomass into biofuel. The scenarios were (i) bioethanol, (ii) biogas and (iii) coproduction of bioethanol and biogas. In the last scenario, the biomass was first used for bioethanol fermentation and subsequently the effluent from this process was utilized for biogas production. The net GHG reduction was calculated as the avoided fossil fuel\uffe2\uff80\uff90derived CO2, where the N2O emission was subtracted. This value did not account for fossil fuel\uffe2\uff80\uff90derived CO2 emissions from farm machinery and during conversion processes that turn biomass into biofuel. The greatest net GHG reduction, corresponding to 700\uffe2\uff80\uff93800\uffc2\uffa0g\uffc2\uffa0CO2\uffc2\uffa0m\uffe2\uff88\uff922, was obtained by biogas production or coproduction of bioethanol and biogas on either fresh grass\uffe2\uff80\uff93clover or whole crop maize. In contrast, biofuel production based on lignocellulosic crop residues (i.e. rye and vetch straw) provided considerably lower net GHG reductions (\uffe2\uff89\uffa4215\uffc2\uffa0g\uffc2\uffa0CO2\uffc2\uffa0m\uffe2\uff88\uff922), and even negative numbers sometimes. No GHG benefit was achieved by fertilizing the maize crop because the extra crop yield, and thereby increased biofuel production, was offset by enhanced N2O emissions.</p>", "keywords": ["2. Zero hunger", "Pasture and forage crops", "Nutrient turnover", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Cereals", " pulses and oilseeds", "Air and water emissions", "7. Clean energy"]}, "links": [{"href": "https://doi.org/10.1111/j.1757-1707.2011.01132.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1757-1707.2011.01132.x", "name": "item", "description": "10.1111/j.1757-1707.2011.01132.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1757-1707.2011.01132.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2011-11-22T00:00:00Z"}}, {"id": "10.1111/j.1757-1707.2012.01160.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:21Z", "type": "Journal Article", "created": "2012-02-27", "title": "Carbon Sequestration In Soil In A Semi-Natural Miscanthus Sinensis Grassland And Cryptomeria Japonica Forest Plantation In Aso, Kumamoto, Japan", "description": "Abstract<p>Although Miscanthus sinensis grasslands (Misc\uffe2\uff80\uff90GL) and Cryptomeria japonica forest plantations (Cryp\uffe2\uff80\uff90FP) are proposed bioenergy feedstock systems, their relative capacity to sequester C may be an important factor in determining their potential for sustainable bioenergy production. Therefore, our objective was to quantify changes in soil C sequestration 47\uffc2\uffa0years after a Misc\uffe2\uff80\uff90GL was converted to a Cryp\uffe2\uff80\uff90FP. The study was conducted on adjacent Misc\uffe2\uff80\uff90GL and Cryp\uffe2\uff80\uff90FP located on Mt. Aso, Kumamoto, Japan. After Cryp\uffe2\uff80\uff90FP establishment, only the Misc\uffe2\uff80\uff90GL continued to be managed by annual burning every March. Mass C and N, \uffce\uffb413C, and \uffce\uffb415N at 0\uffe2\uff80\uff9330\uffc2\uffa0cm depth were measured in 5\uffc2\uffa0cm increments. Carbon and N concentrations, C:N ratio, \uffce\uffb413C, and \uffce\uffb415N were measured in litter and/or ash, and rhizomes or roots. Although C input in Misc\uffe2\uff80\uff90GL by M. sinensis was approximately 36% of that in Cryp\uffe2\uff80\uff90FP by C. japonica, mean annual soil C sequestration in Misc\uffe2\uff80\uff90GL (503\uffc2\uffa0kg\uffc2\uffa0C\uffc2\uffa0ha\uffe2\uff88\uff921\uffc2\uffa0yr\uffe2\uff88\uff921) was higher than that in Cryp\uffe2\uff80\uff90FP (284\uffc2\uffa0kg\uffc2\uffa0C\uffc2\uffa0ha\uffe2\uff88\uff921\uffc2\uffa0yr\uffe2\uff88\uff921). This was likely the result of larger C input from aboveground litter to soil, C\uffe2\uff80\uff90quality (C:N ratio and lignin concentration in aboveground litter) and possibly more recalcitrant C (charcoal) inputs by annual burning. The difference in soil \uffce\uffb415N between sites indicated that organic C with N had greater cycling between heterotrophic microbes and soil and produces more recalcitrant humus in Misc\uffe2\uff80\uff90GL than in Cryp\uffe2\uff80\uff90FP. Our data indicate that in terms of soil C sequestration, maintenance of Misc\uffe2\uff80\uff90GL may be more advantageous than conversion to Cryp\uffe2\uff80\uff90FP in Aso, Japan.</p>", "keywords": ["470", "2. Zero hunger", "\u03b413C", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "carbon sequestration", "Cryptomeria japonica", "Miscanthus sinensis", "7. Clean energy", "\u03b415N", "soil"]}, "links": [{"href": "https://doi.org/10.1111/j.1757-1707.2012.01160.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1757-1707.2012.01160.x", "name": "item", "description": "10.1111/j.1757-1707.2012.01160.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1757-1707.2012.01160.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-02-27T00:00:00Z"}}, {"id": "10.1111/j.1757-1707.2012.01188.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:21Z", "type": "Journal Article", "created": "2012-07-09", "title": "How Effective Are The Sustainability Criteria Accompanying The European Union 2020 Biofuel Targets?", "description": "Abstract<p>The expansion of biofuel production can lead to an array of negative environmental impacts. Therefore, the European Union (EU) has recently imposed sustainability criteria on biofuel production in the Renewable Energy Directive (RED). In this article, we analyse the effectiveness of the sustainability criteria for climate change mitigation and biodiversity conservation. We first use a global agriculture and forestry model to investigate environmental effects of the EU member states National Renewable Energy Action Plans (NREAPs) without sustainability criteria. We conclude that these targets would drive losses of 2.2\uffc2\uffa0Mha of highly biodiverse areas and generate 95\uffc2\uffa0Mt\uffc2\uffa0CO 2 eq of additional greenhouse gas (GHG) emissions. However, in a second step, we demonstrate that the EU biofuel demand could be satisfied \uffe2\uff80\uff98sustainably\uffe2\uff80\uff99 according to RED despite its negative environmental effects. This is because the majority of global crop production is produced \uffe2\uff80\uff98sustainably\uffe2\uff80\uff99 in the sense of RED and can provide more than 10 times the total European biofuel demand in 2020 if reallocated from sectors without sustainability criteria. This finding points to a potential policy failure of applying sustainability regulation to a single sector in a single region. To be effective this policy needs to be more complete in targeting a wider scope of agricultural commodities and more comprehensive in its membership of countries.</p>", "keywords": ["2. Zero hunger", "research", "330", "emissions", "dynamics", "02 engineering and technology", "15. Life on land", "16. Peace & justice", "7. Clean energy", "01 natural sciences", "12. Responsible consumption", "livestock", "13. Climate action", "11. Sustainability", "land-use", "0202 electrical engineering", " electronic engineering", " information engineering", "deforestation", "ethanol", "0105 earth and related environmental sciences"]}, "links": [{"href": "http://pure.iiasa.ac.at/id/eprint/12217/1/frank.pdf"}, {"href": "https://doi.org/10.1111/j.1757-1707.2012.01188.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/GCB%20Bioenergy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1757-1707.2012.01188.x", "name": "item", "description": "10.1111/j.1757-1707.2012.01188.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1757-1707.2012.01188.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-07-09T00:00:00Z"}}, {"id": "10115/24585", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:26:42Z", "type": "Journal Article", "created": "2023-02-21", "title": "Functional traits explain both seedling and adult plant spatial patterns in gypsum annual species", "description": "Abstract<p>   <p>Ecological processes such as seed dispersal or plant\uffe2\uff80\uff93plant interactions and environmental constraints such as climate or soil heterogeneity are known to influence establishment, and thus the spatial patterns of plant communities and populations. In this study, we hypothesized that key functional traits such as the specific leaf area (SLA), reproductive ratio (reproductive/vegetative biomass), seed mass and maximum plant height would influence the spatial patterns of individual species in annual, gypsophilous plant communities, and that these effects would be modulated by both the soil surface structure (biocrust) and climate (precipitation) conditions.</p>  <p>We mapped the spatial patterns of all plants found in six 1\uffe2\uff80\uff89\uffc3\uff97\uffe2\uff80\uff891\uffc2\uffa0m plots (more than 1000 individuals per plot) in both the seedling (autumn) and adult stages (spring) under two biocrust experimental conditions (intact vs. disturbed biocrust) during two consecutive years which were contrasted in term of precipitation (dry year and wet year). To assess the spatial patterns of seedlings and adults, we fitted four different spatial point pattern models (i.e. Poisson, inhomogeneous Poisson, Poisson cluster and inhomogeneous Poisson cluster processes) to each of the 242 populations of the 26 most abundant species that had more than 15 individuals per plot.</p>  <p>Most seedling populations exhibited clustered spatial patterns that persisted in the adult stage, which suggests that short\uffe2\uff80\uff90distance dispersal is an adaptive trait for soil specialists such as gypsophilous plants. One\uffe2\uff80\uff90third of the populations fitted an inhomogeneous model best but the physical structure of the biocrust was not related to them. More importantly, we found a connection between the functional strategies of species and the spatial distribution of plants. In particular, during the dry year, irrespective of the biocrust conditions, species with a high SLA and high Rep/Veg mainly exhibited clustered spatial patterns, whereas low SLA and low Rep/Veg were associated with random distributions. Species with heavy and light seed masses had random and clustered patterns, respectively. In both the dry and wet years, species with lower maximum heights had clustered patterns, whereas taller species exhibited random patterns. In addition, species with heavier seeds and greater maximum heights had the largest cluster sizes.</p>  <p>Our results confirm that the spatial patterns of seedlings and adult plants are significantly determined by the functional strategy of each species.</p>  </p><p>Read the free Plain Language Summary for this article on the Journal blog.</p", "keywords": ["2. Zero hunger", "0106 biological sciences", "point pattern analysis", "04 agricultural and veterinary sciences", "15. Life on land", "seed mass", "01 natural sciences", "maximum plant height", "biological soil crust", "seed dispersal", "reproductive/vegetative biomass ratio", "gypsophyte", "0401 agriculture", " forestry", " and fisheries", "specific leaf area"]}, "links": [{"href": "https://besjournals.onlinelibrary.wiley.com/doi/pdf/10.1111/1365-2435.14304"}, {"href": "https://doi.org/10115/24585"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Functional%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10115/24585", "name": "item", "description": "10115/24585", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10115/24585"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-04-13T00:00:00Z"}}, {"id": "10.1111/jam.13606", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2017-10-09", "title": "Soil Microbiota Respond To Green Manure In Organic Vineyards", "description": "The aim of this work was to investigate the effects of biodynamic management with and without the addition of green manure, in comparison with organic management, on the microbiota in vineyards soil.High throughput sequencing was used to compare the taxonomic structure of the soil bacterial and fungal communities from vineyards managed with different methods (organic, biodynamic or biodynamic with green manure). Our results showed that microbial communities associated with biodynamic and organic farming systems were very similar, while green manure was the greatest source of soil microbial biodiversity and significantly changed microbial richness and community composition compared with other soils. Green manure also significantly enriched bacterial taxa involved in the soil nitrogen cycle (e.g. Microvirga sp., Pontibacter sp. and Nitrospira sp.).Our results showed that the diversity and composition of the microbial communities associated with biodynamic and organic farming systems were similar, indicating that the use of biodynamic preparations 500 and 501 did not cause any significant detectable changes to the soil microbial community in the short term, while the effects of green manure were significant in soil microbiota.The microbiological richness and structure of soil are used as a sensitive indicator of soil quality. The extension of organic/biodynamic farming, associated with green manure application, could contribute to increase the abundance of functional groups of biological and agronomical relevance and maintaining microbial biodiversity in vineyard soils.", "keywords": ["0301 basic medicine", "2. Zero hunger", "570", "Microbial diversity", "Organic Agriculture", "0303 health sciences", "bacteria; biodynamic vineyard; fungi; green manure; microbial community structure; microbial diversity; organic vineyard; soil microbiology; soil vineyard", "Microbiota", "Green manure", "Microbial community structure", "Biodiversity", "15. Life on land", "630", "Manure", "Soil vineyard", "Soil", "03 medical and health sciences", "Soil microbiology", "13. Climate action", "Settore AGR/16 - MICROBIOLOGIA AGRARIA", "Vitis", "Soil Microbiology"]}, "links": [{"href": "https://iris.unitn.it/bitstream/11572/283669/1/jam.13606.pdf"}, {"href": "https://doi.org/10.1111/jam.13606"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Applied%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/jam.13606", "name": "item", "description": "10.1111/jam.13606", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/jam.13606"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-11-03T00:00:00Z"}}, {"id": "10.1111/maps.12922", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2017-07-27", "title": "Implications for behavior of volatile elements during impacts-Zinc and copper systematics in sediments from the Ries impact structure and central European tektites", "description": "Abstract<p>Moldavites are tektites genetically related to the Ries impact structure, located in Central Europe, but the source materials and the processes related to the chemical fractionation of moldavites are not fully constrained. To further understand moldavite genesis, the Cu and Zn abundances and isotope compositions were measured in a suite of tektites from four different substrewn fields (South Bohemia, Moravia, Cheb Basin, Lusatia) and chemically diverse sediments from the surroundings of the Ries impact structure. Moldavites are slightly depleted in Zn (~10\uffe2\uff80\uff9320%) and distinctly depleted in Cu (&gt;90%) relative to supposed sedimentary precursors. Moreover, the moldavites show a wide range in \uffce\uffb466Zn values between 1.7 and 3.7\uffe2\uff80\uffb0 (relative to JMC 3\uffe2\uff80\uff900749 Lyon) and \uffce\uffb465Cu values between 1.6 and 12.5\uffe2\uff80\uffb0 (relative to NIST SRM 976) and are thus enriched in heavy isotopes relative to their possible parent sedimentary sources (\uffce\uffb466Zn\uffc2\uffa0=\uffc2\uffa0\uffe2\uff88\uff920.07 to +0.64\uffe2\uff80\uffb0; \uffce\uffb465Cu\uffc2\uffa0=\uffc2\uffa0\uffe2\uff88\uff920.4 to +0.7\uffe2\uff80\uffb0). In particular, the Cheb Basin moldavites show some of the highest \uffce\uffb465Cu values (up to 12.5\uffe2\uff80\uffb0) ever observed in natural samples. The relative magnitude of isotope fractionation for Cu and Zn seen here is opposite to oxygen\uffe2\uff80\uff90poor environments such as the Moon where Zn is significantly more isotopically fractionated than Cu. One possibility is that monovalent Cu diffuses faster than divalent Zn in the reduced melt and diffusion will not affect the extent of Zn isotope fractionation. These observations imply that the capability of forming a redox environment may aid in volatilizing some elements, accompanied by isotope fractionation, during the impact process. The greater extent of elemental depletion, coupled with isotope fractionation of more refractory Cu relative to Zn, may also hinge on the presence of carbonyl species of transition metals and electromagnetic charge, which could exist in the impact\uffe2\uff80\uff90induced high\uffe2\uff80\uff90velocity jet of vapor and melts.</p>", "keywords": ["550", "GRANITES", "NDAS", "Ries crater", "01 natural sciences", "Tektites", "ZINC", "[SDU.STU.GC] Sciences of the Universe [physics]/Earth Sciences/Geochemistry", "QE", "14. Life underwater", "STABLE-ISOTOPE GEOCHEMISTRY", "QC", "0105 earth and related environmental sciences", "Copper isotopes", "ORIGIN", "AUSTRALASIAN TEKTITES", "FRACTIONATION", "IRON", "500", "LACHLAN FOLD BELT", "Ries area sediments", "QE Geology", "Impact", "QC Physics", "13. Climate action", "Volatile loss", "ZN", "Isotope fractionation", "Zinc isotopes", "CU"]}, "links": [{"href": "http://onlinelibrary.wiley.com/wol1/doi/10.1111/maps.12922/fullpdf"}, {"href": "https://doi.org/10.1111/maps.12922"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Meteoritics%20%26amp%3B%20Planetary%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/maps.12922", "name": "item", "description": "10.1111/maps.12922", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/maps.12922"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-07-27T00:00:00Z"}}, {"id": "10.1111/mec.13010", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2014-11-20", "title": "Long-Term Balanced Fertilization Increases The Soil Microbial Functional Diversity In A Phosphorus-Limited Paddy Soil", "description": "Abstract<p>The influence of long\uffe2\uff80\uff90term chemical fertilization on soil microbial communities has been one of the frontier topics of agricultural and environmental sciences and is critical for linking soil microbial flora with soil functions. In this study, 16S rRNA gene pyrosequencing and a functional gene array, geochip 4.0, were used to investigate the shifts in microbial composition and functional gene structure in paddy soils with different fertilization treatments over a 22\uffe2\uff80\uff90year period. These included a control without fertilizers; chemical nitrogen fertilizer (N); N and phosphate (NP); N and potassium (NK); and N, P and K (NPK). Based on 16S rRNA gene data, both species evenness and key genera were affected by P fertilization. Functional gene array\uffe2\uff80\uff90based analysis revealed that long\uffe2\uff80\uff90term fertilization significantly changed the overall microbial functional structures. Chemical fertilization significantly increased the diversity and abundance of most genes involved in C, N, P and S cycling, especially for the treatments NK and NPK. Significant correlations were found among functional gene structure and abundance, related soil enzymatic activities and rice yield, suggesting that a fertilizer\uffe2\uff80\uff90induced shift in the microbial community may accelerate the nutrient turnover in soil, which in turn influenced rice growth. The effect of N fertilization on soil microbial functional genes was mitigated by the addition of P fertilizer in this P\uffe2\uff80\uff90limited paddy soil, suggesting that balanced chemical fertilization is beneficial to the soil microbial community and its functions.</p>", "keywords": ["2. Zero hunger", "Bacteria", "Nitrogen", "Oryza", "Phosphorus", "Sequence Analysis", " DNA", "04 agricultural and veterinary sciences", "Nitrogen Cycle", "15. Life on land", "6. Clean water", "Carbon Cycle", "Soil", "13. Climate action", "RNA", " Ribosomal", " 16S", "Potassium", "0401 agriculture", " forestry", " and fisheries", "Biomass", "Fertilizers", "Ecosystem", "Phylogeny", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1111/mec.13010"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Molecular%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/mec.13010", "name": "item", "description": "10.1111/mec.13010", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/mec.13010"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-12-31T00:00:00Z"}}, {"id": "10.1111/maps.13312", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2019-06-10", "title": "Identification of a meteoritic component using chromium isotopic composition of impact rocks from the Lonar impact structure, India", "description": "Abstract<p>The existence of mass\uffe2\uff80\uff90independent chromium isotope variability of nucleosynthetic origin in meteorites and their components provides a means to investigate potential genetic relationship between meteorites and planetary bodies. Moreover, chromium abundances are depleted in most surficial terrestrial rocks relative to chondrites such that Cr isotopes are a powerful tool to detect the contribution of various types of extra\uffe2\uff80\uff90terrestrial material in terrestrial impactites. This approach can thus be used to constrain the nature of the bolide resulting in breccia and melt rocks in terrestrial impact structures. Here, we report the Cr isotope composition of impact rocks from the ~0.57\uffc2\uffa0Ma Lonar crater (India), which is the best\uffe2\uff80\uff90preserved impact structure excavated in basaltic target rocks. Results confirm the\uffc2\uffa0presence of a chondritic component in several bulk rock samples of up to 3%. The impactor that created the Lonar crater had a composition that was most likely similar to that of carbonaceous chondrites, possibly a CM\uffe2\uff80\uff90type chondrite.</p>", "keywords": ["TERRESTRIAL", "TARGET ROCKS", "SYSTEMATICS", "KeyWords Plus:TARGET ROCKS", "01 natural sciences", "PROJECTILES", "[SDU] Sciences of the Universe [physics]", "INSIGHTS", "105105 Geochemistry", "13. Climate action", "CRATER", "GLASSES", "105105 Geochemie", "MELT ROCKS", "PETROGRAPHY", "GEOCHEMISTRY", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/maps.13312"}, {"href": "https://doi.org/10.1111/maps.13312"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Meteoritics%20%26amp%3B%20Planetary%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/maps.13312", "name": "item", "description": "10.1111/maps.13312", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/maps.13312"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-06-09T00:00:00Z"}}, {"id": "10.1111/mec.13620", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2016-03-19", "title": "The Impact Of Tropical Forest Logging And Oil Palm Agriculture On The Soil Microbiome", "description": "Abstract<p>Selective logging and forest conversion to oil palm agriculture are rapidly altering tropical forests. However, functional responses of the soil microbiome to these land\uffe2\uff80\uff90use changes are poorly understood. Using 16S rRNA gene and shotgun metagenomic sequencing, we compared composition and functional attributes of soil biota between unlogged, once\uffe2\uff80\uff90logged and twice\uffe2\uff80\uff90logged rainforest, and areas converted to oil palm plantations in Sabah, Borneo. Although there was no significant effect of logging history, we found a significant difference between the taxonomic and functional composition of both primary and logged forests and oil palm. Oil palm had greater abundances of genes associated with DNA, RNA, protein metabolism and other core metabolic functions, but conversely, lower abundance of genes associated with secondary metabolism and cell\uffe2\uff80\uff93cell interactions, indicating less importance of antagonism or mutualism in the more oligotrophic oil palm environment. Overall, these results show a striking difference in taxonomic composition and functional gene diversity of soil microorganisms between oil palm and forest, but no significant difference between primary forest and forest areas with differing logging history. This reinforces the view that logged forest retains most features and functions of the original soil community. However, networks based on strong correlations between taxonomy and functions showed that network complexity is unexpectedly increased due to both logging and oil palm agriculture, which suggests a pervasive effect of both land\uffe2\uff80\uff90use changes on the interaction of soil microbes.</p>", "keywords": ["0301 basic medicine", "Conservation of Natural Resources", "0303 health sciences", "Bacteria", "Microbiota", "Agriculture", "Forestry", "Biodiversity", "Arecaceae", "Forests", "15. Life on land", "03 medical and health sciences", "Borneo", "international", "RNA", " Ribosomal", " 16S", "Metagenome", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/10.1111/mec.13620"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Molecular%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/mec.13620", "name": "item", "description": "10.1111/mec.13620", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/mec.13620"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-04-20T00:00:00Z"}}, {"id": "10.1111/mec.15270", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2019-10-16", "title": "Reduced tillage, but not organic matter input, increased nematode diversity and food web stability in European long\u2010term field experiments", "description": "Abstract<p>Soil nematode communities and food web indices can inform about the complexity, nutrient flows and decomposition pathways of soil food webs, reflecting soil quality. Relative abundance of nematode feeding and life\uffe2\uff80\uff90history groups are used for calculating food web indices, i.e., maturity index (MI), enrichment index (EI), structure index (SI) and channel index (CI). Molecular methods to study nematode communities potentially offer advantages compared to traditional methods in terms of resolution, throughput, cost and time. In spite of such advantages, molecular data have not often been adopted so far to assess the effects of soil management on nematode communities and to calculate these food web indices. Here, we used high\uffe2\uff80\uff90throughput amplicon sequencing to investigate the effects of tillage (conventional vs. reduced) and organic matter addition (low vs. high) on nematode communities and food web indices in 10 European long\uffe2\uff80\uff90term field experiments and we assessed the relationship between nematode communities and soil parameters. We found that nematode communities were more strongly affected by tillage than by organic matter addition. Compared to conventional tillage, reduced tillage increased nematode diversity (23% higher Shannon diversity index), nematode community stability (12% higher MI), structure (24% higher SI), and the fungal decomposition channel (59% higher CI), and also the number of herbivorous nematodes (70% higher). Total and labile organic carbon, available K and microbial parameters explained nematode community structure. Our findings show that nematode communities are sensitive indicators of soil quality and that molecular profiling of nematode communities has the potential to reveal the effects of soil management on soil quality.</p", "keywords": ["Food Chain", "Nematoda", "Environmental aspects", "long-term field experiments", "Nematode communities", "Soil quality", "Long-term field experiments", "Tillage", "Soil", "Animals", "Ecosystem", "Soil Microbiology", "Amplicon sequencing", "organic matter addition", "2. Zero hunger", "nematode communities", "Food web indices", "amplicon sequencing", "Fungi", "04 agricultural and veterinary sciences", "15. Life on land", "Soil tillage", "Europe", "tillage", "Organic matter addition", "0401 agriculture", " forestry", " and fisheries", "food web indices", "ORIGINAL ARTICLES", "Amplicon sequencing; Food web indices; Long-term field experiments; Nematode communities; Organic matter addition; Tillage"]}, "links": [{"href": "https://doi.org/10.1111/mec.15270"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Molecular%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/mec.15270", "name": "item", "description": "10.1111/mec.15270", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/mec.15270"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-10-31T00:00:00Z"}}, {"id": "10.1111/mec.15632", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2020-09-27", "title": "Comparison of markers for the monitoring of freshwater benthic biodiversity through DNA metabarcoding", "description": "Abstract<p>Metabarcoding of bulk or environmental DNA has great potential for biomonitoring of freshwater environments. However, successful application of metabarcoding to biodiversity monitoring requires universal primers with high taxonomic coverage that amplify highly variable, short metabarcodes with high taxonomic resolution. Moreover, reliable and extensive reference databases are essential to match the outcome of metabarcoding analyses with available taxonomy and biomonitoring indices. Benthic invertebrates, particularly insects, are key taxa for freshwater bioassessment. Nevertheless, few studies have so far assessed markers for metabarcoding of freshwater macrobenthos. Here we combined in silico and laboratory analyses to test the performance of different markers amplifying regions in the 18S rDNA (Euka02), 16S rDNA (Inse01) and COI (BF1_BR2\uffe2\uff80\uff90COI) genes, and developed an extensive database of benthic macroinvertebrates of France and Europe, with a particular focus on key insect orders (Ephemeroptera, Plecoptera and Trichoptera). Analyses on 1,514 individuals representing different taxa of benthic macroinvertebrates showed very different amplification success across primer combinations. The Euka02 marker showed the highest universality, while the Inse01 marker showed excellent performance for the amplification of insects. BF1_BR2\uffe2\uff80\uff90COI showed the highest resolution, while the resolution of Euka02 was often limited. By combining our data with GenBank information, we developed a curated database including sequences representing 822 genera. The heterogeneous performance of the different primers highlights the complexity in identifying the best markers, and advocates for the integration of multiple metabarcodes for a more comprehensive and accurate understanding of ecological impacts on freshwater biodiversity.</p>", "keywords": ["0106 biological sciences", "570", "amplification rate; biomonitoring; biotic indices; cytochrome c oxidase I; environmental DNA; freshwater biodiversity; macroinvertebrates; primer bias; taxonomic resolution; universality", "500", "Fresh Water", "Biodiversity", "15. Life on land", "01 natural sciences", "[SDE.BE] Environmental Sciences/Biodiversity and Ecology", "Europe", "Animals", "DNA Barcoding", " Taxonomic", "Humans", "France", "[SDE.BE]Environmental Sciences/Biodiversity and Ecology"]}, "links": [{"href": "https://air.unimi.it/bitstream/2434/791349/3/ficetola%20et%20al%202020%20Mol%20Ecol%20submitted.pdf"}, {"href": "https://air.unimi.it/bitstream/2434/791349/4/mec.15632.pdf"}, {"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/mec.15632"}, {"href": "https://doi.org/10.1111/mec.15632"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Molecular%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/mec.15632", "name": "item", "description": "10.1111/mec.15632", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/mec.15632"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-09-28T00:00:00Z"}}, {"id": "10.1111/nph.15516", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:23Z", "type": "Journal Article", "created": "2018-10-06", "title": "Imaging microstructure of the barley rhizosphere: particle packing and root hair influences", "description": "Summary<p>   <p>Soil adjacent to roots has distinct structural and physical properties from bulk soil, affecting water and solute acquisition by plants. Detailed knowledge on how root activity and traits such as root hairs affect the three\uffe2\uff80\uff90dimensional pore structure at a fine scale is scarce and often contradictory.</p>  <p>Roots of hairless barley (Hordeum vulgare L. cv Optic) mutant (NRH) and its wildtype (WT) parent were grown in tubes of sieved (&lt;250\uffc2\uffa0\uffce\uffbcm) sandy loam soil under two different water regimes. The tubes were scanned by synchrotron\uffe2\uff80\uff90based X\uffe2\uff80\uff90ray computed tomography to visualise pore structure at the soil\uffe2\uff80\uff93root interface. Pore volume fraction and pore size distribution were analysed vs distance within 1\uffc2\uffa0mm of the root surface.</p>  <p>Less dense packing of particles at the root surface was hypothesised to cause the observed increased pore volume fraction immediately next to the epidermis. The pore size distribution was narrower due to a decreased fraction of larger pores. There were no statistically significant differences in pore structure between genotypes or moisture conditions.</p>  <p>A model is proposed that describes the variation in porosity near roots taking into account soil compaction and the surface effect at the root surface.</p>  </p", "keywords": ["name=Physiology", "STABILIZATION", "Physiology", "EP/M020355/1", "Supplementary Data", "QH301 Biology", "Plant Science", "Supplementary data available", "Plant Roots", "630", "noninvasive imaging", "Soil", "646809DIMR", "STRENGTH", "BB/J00868/1", "Hordeum vulgare", "2. Zero hunger", "04 agricultural and veterinary sciences", "Rhizosphere", "COMPRESSION", "soil structure", "Porosity", "European Research Council", "/dk/atira/pure/subjectarea/asjc/1300/1314", "/dk/atira/pure/subjectarea/asjc/1100/1110", "root hairs", "COMPACTION", "QH301", "Imaging", " Three-Dimensional", "synchrotron", "particle packing", "SOIL-STRUCTURE", "BB/L025620/1", "WATER-STRESS", "NE/L00237/1", "580", "ELONGATION", "Civil_env_eng", "Natural Environment Research Council (NERC)", "POROSITY", "Water", "Hordeum", "15. Life on land", "Engineering and Physical Sciences Research Council (EPSRC)", "Mutation", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "PENETRATION", "name=Plant Science", "rhizosphere", "Tomography", " X-Ray Computed", "MAIZE", "BB/P004180/1", "Synchrotrons", "BB/L025825/1"]}, "links": [{"href": "https://repository.uwl.ac.uk/id/eprint/5489/1/AS6808504337817661539338801587_content_1.pdf"}, {"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.15516"}, {"href": "https://doi.org/10.1111/nph.15516"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.15516", "name": "item", "description": "10.1111/nph.15516", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.15516"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-11-20T00:00:00Z"}}, {"id": "10.1111/mice.12902", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2022-08-09", "title": "Optimization and performance of metafoundations for seismic isolation of small modular reactors", "description": "Abstract<p>This paper aims to study the seismic mitigation of a typical nuclear small modular reactor (SMR) where extreme loading conditions are considered by the safe shutdown earthquake. For this purpose, to reproduce the main dynamic properties of the reactor's reinforced concrete system, a detailed structural model was synthetized, also taking into account the presence of the reactor pools. Thus, to protect the reactor from strong earthquakes, finite locally resonant multiple degrees of freedom metafoundations were developed; and resonator parameters were optimized by means of an improved frequency domain multivariate and multiobjective optimization procedure. Also, the stochastic nature of the seismic input was taken into account. It is proposed: (i) a linear metafoundation endowed with multiple cells, linear springs, and linear viscous dampers; and (ii) a foundation equipped with additional nonlinear vertical quasi\uffe2\uff80\uff90zero stiffness (QZS) cells. QZS cells were obtained by horizontally precompressed springs in an unstable state with vertical springs in parallel. With this arrangement, additional flexibility and dissipation against nonsymmetrical modes of the SMR and vertical seismic loadings are proposed. It was shown in both cases, how each metafoundation was successfully optimized via a sensitivity\uffe2\uff80\uff90based parameter grouping strategy and a hybrid grid searching algorithm. Thus, the performance of the optimized metafoundations was assessed by means of frequency and time history analyses; and finally, results were compared with an SMR endowed with both rigid foundation and conventional base\uffe2\uff80\uff90isolation solutions.</p", "keywords": ["nuclear-power-plantseuler", " Buckled beam", " vibration isolator", " multiobjective optimization", " design", "0202 electrical engineering", " electronic engineering", " information engineering", "02 engineering and technology", "7. Clean energy", "0201 civil engineering"], "contacts": [{"organization": "Guner T., Bursi O. S., Erlicher S.,", "roles": ["creator"]}]}, "links": [{"href": "https://iris.unitn.it/bitstream/11572/357601/4/Computer%20aided%20Civil%20Eng%20-%202022%20-%20Guner%20-%20Optimization%20and%20performance%20of%20metafoundations%20for%20seismic%20isolation%20of%20small.pdf"}, {"href": "https://doi.org/10.1111/mice.12902"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Computer-Aided%20Civil%20and%20Infrastructure%20Engineering", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/mice.12902", "name": "item", "description": "10.1111/mice.12902", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/mice.12902"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-08-08T00:00:00Z"}}, {"id": "10.1111/nph.12333", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2013-05-30", "title": "Cumulative Response Of Ecosystem Carbon And Nitrogen Stocks To Chronic Co2exposure In A Subtropical Oak Woodland", "description": "Summary<p>   <p>Rising atmospheric carbon dioxide (CO2) could alter the carbon (C) and nitrogen (N) content of ecosystems, yet the magnitude of these effects are not well known. We examined C and N budgets of a subtropical woodland after 11\uffc2\uffa0yr of exposure to elevated CO2.</p>  <p>We used open\uffe2\uff80\uff90top chambers to manipulate CO2 during regrowth after fire, and measured C, N and tracer 15N in ecosystem components throughout the experiment.</p>  <p>Elevated CO2 increased plant C and tended to increase plant N but did not significantly increase whole\uffe2\uff80\uff90system C or N. Elevated CO2 increased soil microbial activity and labile soil C, but more slowly cycling soil C pools tended to decline. Recovery of a long\uffe2\uff80\uff90term 15N tracer indicated that CO2 exposure increased N losses and altered N distribution, with no effect on N inputs.</p>  <p>Increased plant C accrual was accompanied by higher soil microbial activity and increased C losses from soil, yielding no statistically detectable effect of elevated CO2 on net ecosystem C uptake. These findings challenge the treatment of terrestrial ecosystems responses to elevated CO2 in current biogeochemical models, where the effect of elevated CO2 on ecosystem C balance is described as enhanced photosynthesis and plant growth with decomposition as a first\uffe2\uff80\uff90order response.</p>  </p>", "keywords": ["Soil organic matter", "Long term experiment", "Elevated atmospheric CO2", "Florida scrub oak", "Scrub oak", "Research", "Plant Sciences", "Aboveground biomass", "Plant Biology", "Microbial communities", "04 agricultural and veterinary sciences", "Carbon Cycling", "15. Life on land", "Forest productivity", "Soil carbon", "Rhizosphere processes", "Terrestrial ecosystems", "Dioxide enrichment", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Elevated CO2", "Climate feedbacks", "Global change", "Subtropical woodland", "Nitrogen cycling"]}, "links": [{"href": "https://digitalcommons.odu.edu/context/biology_fac_pubs/article/1264/viewcontent/Day2013CumulativeResponseofEcosystemCarbonandNitrogenOCR.pdf"}, {"href": "https://doi.org/10.1111/nph.12333"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.12333", "name": "item", "description": "10.1111/nph.12333", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.12333"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-05-30T00:00:00Z"}}, {"id": "10.1111/nph.12569", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2013-10-31", "title": "Experimental Drought Reduces The Transfer Of Recently Fixed Plant Carbon To Soil Microbes And Alters The Bacterial Community Composition In A Mountain Meadow", "description": "Summary<p>   <p>Drought affects plants and soil microorganisms, but it is still not clear how it alters the carbon (C) transfer at the plant\uffe2\uff80\uff93microbial interface. Here, we tested direct and indirect effects of drought on soil microbes and microbial turnover of recent plant\uffe2\uff80\uff90derived C in a mountain meadow.</p>  <p>Microbial community composition was assessed using phospholipid fatty acids (PLFAs); the allocation of recent plant\uffe2\uff80\uff90derived C to microbial groups was analysed by pulse\uffe2\uff80\uff90labelling of canopy sections with 13CO2 and the subsequent tracing of the label into microbial PLFAs.</p>  <p>Microbial biomass was significantly higher in plots exposed to a severe experimental drought. In addition, drought induced a shift of the microbial community composition, mainly driven by an increase of Gram\uffe2\uff80\uff90positive bacteria. Drought reduced belowground C allocation, but not the transfer of recently plant\uffe2\uff80\uff90assimilated C to fungi, and in particular reduced tracer uptake by bacteria. This was accompanied by an increase of 13C in the extractable organic C pool during drought, which was even more pronounced after plots were mown.</p>  <p>We conclude that drought weakened the link between plant and bacterial, but not fungal, C turnover, and facilitated the growth of potentially slow\uffe2\uff80\uff90growing, drought\uffe2\uff80\uff90adapted soil microbes, such as Gram\uffe2\uff80\uff90positive bacteria.</p>  </p>", "keywords": ["Time Factors", "Nitrogen", "Mowing", "Mountain grassland", "Carbon Cycle", "Microbial community composition", "Soil", "Biomass", "Ecosystem", "Soil Microbiology", "2. Zero hunger", "106022 Mikrobiologie", "Carbon Isotopes", "Drought", "Research", "Microbiota", "Water", "Carbon allocation", "Microclimate", "04 agricultural and veterinary sciences", "15. Life on land", "Carbon", "6. Clean water", "Droughts", "C pulse-labelling", "13. Climate action", "Austria", "Phospholipid fatty acids", "106022 Microbiology", "0401 agriculture", " forestry", " and fisheries"]}, "links": [{"href": "https://doi.org/10.1111/nph.12569"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.12569", "name": "item", "description": "10.1111/nph.12569", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.12569"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-10-31T00:00:00Z"}}, {"id": "10.1111/nph.14288", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:23Z", "type": "Journal Article", "created": "2016-11-07", "title": "The response of ecosystem water-use efficiency to rising atmospheric CO 2 concentrations: sensitivity and large-scale biogeochemical implications", "description": "Summary<p>   <p>Ecosystem water\uffe2\uff80\uff90use efficiency (WUE) is an important metric linking the global land carbon and water cycles. Eddy covariance\uffe2\uff80\uff90based estimates of WUE in temperate/boreal forests have recently been found to show a strong and unexpected increase over the 1992\uffe2\uff80\uff932010 period, which has been attributed to the effects of rising atmospheric CO2 concentrations on plant physiology.</p>  <p>To test this hypothesis, we forced the observed trend in the process\uffe2\uff80\uff90based land surface model JSBACH by increasing the sensitivity of stomatal conductance (gs) to atmospheric CO2 concentration. We compared the simulated continental discharge, evapotranspiration (ET), and the seasonal CO2 exchange with observations across the extratropical northern hemisphere.</p>  <p>The increased simulated WUE led to substantial changes in surface hydrology at the continental scale, including a significant decrease in ET and a significant increase in continental runoff, both of which are inconsistent with large\uffe2\uff80\uff90scale observations. The simulated seasonal amplitude of atmospheric CO2 decreased over time, in contrast to the observed upward trend across ground\uffe2\uff80\uff90based measurement sites.</p>  <p>Our results provide strong indications that the recent, large\uffe2\uff80\uff90scale WUE trend is considerably smaller than that estimated for these forest ecosystems. They emphasize the decreasing CO2 sensitivity of WUE with increasing scale, which affects the physiological interpretation of changes in ecosystem WUE.</p>  </p>", "keywords": ["580", "0106 biological sciences", "Time Factors", "plant physiology", "Vapor Pressure", "evapotranspiration", "577", "Water", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "01 natural sciences", "water efficiency", "3. Good health", "Plant Leaves", "13. Climate action", "atmospheric carbon dioxide", "XXXXXX - Unknown", "0401 agriculture", " forestry", " and fisheries", "Seasons", "ecosystems", "Ecosystem", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.14288"}, {"href": "https://doi.org/10.1111/nph.14288"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.14288", "name": "item", "description": "10.1111/nph.14288", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.14288"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-11-07T00:00:00Z"}}, {"id": "10.1111/nph.14705", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:23Z", "type": "Journal Article", "created": "2017-07-31", "title": "High-resolution synchrotron imaging shows that root hairs influence rhizosphere soil structure formation", "description": "Summary<p>   <p>In this paper, we provide direct evidence of the importance of root hairs on pore structure development at the root\uffe2\uff80\uff93soil interface during the early stage of crop establishment.</p>  <p>This was achieved by use of high\uffe2\uff80\uff90resolution (c. 5\uffc2\uffa0\uffce\uffbcm) synchrotron radiation computed tomography (SRCT) to visualise both the structure of root hairs and the soil pore structure in plant\uffe2\uff80\uff93soil microcosms. Two contrasting genotypes of barley (Hordeum vulgare), with and without root hairs, were grown for 8\uffc2\uffa0d in microcosms packed with sandy loam soil at 1.2\uffc2\uffa0g\uffc2\uffa0cm\uffe2\uff88\uff923 dry bulk density. Root hairs were visualised within air\uffe2\uff80\uff90filled pore spaces, but not in the fine\uffe2\uff80\uff90textured soil regions.</p>  <p>We found that the genotype with root hairs significantly altered the porosity and connectivity of the detectable pore space (&gt;\uffc2\uffa05\uffc2\uffa0\uffce\uffbcm) in the rhizosphere, as compared with the no\uffe2\uff80\uff90hair mutants. Both genotypes showed decreasing pore space between 0.8 and 0.1\uffc2\uffa0mm from the root surface. Interestingly the root\uffe2\uff80\uff90hair\uffe2\uff80\uff90bearing genotype had a significantly greater soil pore volume\uffe2\uff80\uff90fraction at the root\uffe2\uff80\uff93soil interface.</p>  <p>Effects of pore structure on diffusion and permeability were estimated to be functionally insignificant under saturated conditions when simulated using image\uffe2\uff80\uff90based modelling.</p>  </p>", "keywords": ["construction", "EP/M020355/1", "QH301 Biology", "non-invasive imaging", "Plant Roots", "630", "root hairs", "noninvasive imaging", "QH301", "Soil", "Imaging", " Three-Dimensional", "646809DIMR", "synchrotron", "Computer Simulation", "BB/L025620/1", "BB/J00868/1", "NE/L00237/1", "Hordeum vulgare", "580", "2. Zero hunger", "Civil_env_eng", "Natural Environment Research Council (NERC)", "Research", "Hordeum", "04 agricultural and veterinary sciences", "15. Life on land", "image-based modelling", "Engineering and Physical Sciences Research Council (EPSRC)", "Rhizosphere", "Biotechnology and Biological Sciences Research Council (BBSRC)", "0401 agriculture", " forestry", " and fisheries", "rhizosphere", "soil structure", "synchroton", "Porosity", "BB/P004180/1", "Synchrotrons", "BB/L025825/1", "European Research Council"]}, "links": [{"href": "https://repository.uwl.ac.uk/id/eprint/4981/1/Koebernick_et_al-2017-New_Phytologist.pdf"}, {"href": "https://eprints.soton.ac.uk/412143/1/s1_ln2680534218582232741703867393Hwf_1771574461IdV_16951475526805342FIRST_LOOK_PDF0001.pdf"}, {"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.14705"}, {"href": "https://doi.org/10.1111/nph.14705"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.14705", "name": "item", "description": "10.1111/nph.14705", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.14705"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-07-31T00:00:00Z"}}, {"id": "10.1111/nph.12409", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:22Z", "type": "Journal Article", "created": "2013-07-22", "title": "Fire, Hurricane And Carbon Dioxide: Effects On Net Primary Production Of A Subtropical Woodland", "description": "Summary<p>   <p>Disturbance affects most terrestrial ecosystems and has the potential to shape their responses to chronic environmental change.</p>  <p>Scrub\uffe2\uff80\uff90oak vegetation regenerating from fire disturbance in subtropical Florida was exposed to experimentally elevated carbon dioxide (CO2) concentration (+350\uffc2\uffa0\uffce\uffbcl\uffc2\uffa0l\uffe2\uff88\uff921) using open\uffe2\uff80\uff90top chambers for 11\uffc2\uffa0yr, punctuated by hurricane disturbance in year 8. Here, we report the effects of elevated CO2 on aboveground and belowground net primary productivity (NPP) and nitrogen (N) cycling during this experiment.</p>  <p>The stimulation of NPP and N uptake by elevated CO2 peaked within 2\uffc2\uffa0yr after disturbance by fire and hurricane, when soil nutrient availability was high. The stimulation subsequently declined and disappeared, coincident with low soil nutrient availability and with a CO2\uffe2\uff80\uff90induced reduction in the N concentration of oak stems.</p>  <p>These findings show that strong growth responses to elevated CO2 can be transient, are consistent with a progressively limited response to elevated CO2 interrupted by disturbance, and illustrate the importance of biogeochemical responses to extreme events in modulating ecosystem responses to global environmental change.</p>  </p>", "keywords": ["0106 biological sciences", "NITROGEN-USE EFFICIENCY", "Scrub oak ecosystem", "01 natural sciences", "Trees", "Quercus", "Soil", "nitrogen cycling", "oak woodland", "ECOSYSTEMS", "Global environmental change", "Biomass", "ROOT BIOMASS", "disturbance", "Florida scrub", "elevated CO2", "Elevated atmospheric CO2", "Plant Stems", "Cyclonic Storms", "Aboveground biomass", "FOREST PRODUCTIVITY", "Hurricane", "04 agricultural and veterinary sciences", "Nitrogen Cycle", "Fire", "Soil carbon", "LONG-TERM EXPOSURE", "Net primary productivity", "Long term exposure", "Florida", "Elevated CO2", "fire", "FLORIDA SCRUB", "ABOVEGROUND BIOMASS", "Nitrogen cycling", "TERRESTRIAL", "Oak woodland", "ELEVATED ATMOSPHERIC CO2", "Elevated CO 2", "Nitrogen", "hurricane", "Forest productivity", "Fires", "Terrestrial ecosystems", "SCRUB-OAK ECOSYSTEM", "Net primary productivity (NPP)", "Ecosystem", "Nitrogen use efficiency", "Atmosphere", "net primary productivity (NPP)", "Root biomass", "Plant Sciences", "global environmental change", "Disturbance", "Carbon Dioxide", "15. Life on land", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "SOIL CARBON"]}, "links": [{"href": "https://digitalcommons.odu.edu/context/biology_fac_pubs/article/1266/viewcontent/Day2013FireHurricaneandCarbonDioxideOCR.pdf"}, {"href": "https://doi.org/10.1111/nph.12409"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.12409", "name": "item", "description": "10.1111/nph.12409", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.12409"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-07-22T00:00:00Z"}}, {"id": "10.1111/nph.14083", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:23Z", "type": "Journal Article", "created": "2016-07-11", "title": "Increased Phosphate Uptake But Not Resorption Alleviates Phosphorus Deficiency Induced By Nitrogen Deposition In Temperate Larix Principis-Rupprechtii Plantations", "description": "Summary<p>   <p>The imbalance between nitrogen (N) and phosphorus (P) deposition may shift temperate ecosystems from N\uffe2\uff80\uff90 to P\uffe2\uff80\uff90limitation. However, it is unclear how the imbalanced N\uffc2\uffa0:\uffc2\uffa0P input affects the strategies of plants to acquire P and, therefore, the growth of plants and the competition among species.</p>  <p>We conducted a 4\uffe2\uff80\uff90yr N\uffe2\uff80\uff90addition experiment in young and mature larch (Larix principis\uffe2\uff80\uff90rupprechtii) stands. Plant growth and P acquisition strategies were assessed for larch and understorey vegetation.</p>  <p>N addition stimulated the aboveground productivity of understorey vegetation in the young stand and larch in the mature stand, with other species unaffected. The competitive advantages of understorey vegetation in the young stand and larch in the mature stand were associated with their high stoichiometric homoeostasis. To maintain the N\uffc2\uffa0:\uffc2\uffa0P homoeostasis of these species, an increase in phosphatase activity but not P resorption efficiency increased the supply of P. Additionally, N addition accelerated P mineralization by decreasing the fungal\uffe2\uff80\uff90to\uffe2\uff80\uff90bacterial ratios and improved uptake of soil P by increasing the arbuscular mycorrhizas\uffe2\uff80\uff90to\uffe2\uff80\uff90ectomycorrhizas ratios.</p>  <p>Our results suggest that plants with high stoichiometric homoeostasis could better cope with N deposition\uffe2\uff80\uff90induced P\uffe2\uff80\uff90deficiency. Although P resorption efficiency showed little plasticity in response, plants activated a variety of P\uffe2\uff80\uff90acquisition pathways to alleviate the P\uffe2\uff80\uff90deficiency caused by N deposition.</p>  </p>", "keywords": ["2. Zero hunger", "Analysis of Variance", "Bacteria", "Nitrogen", "Acid Phosphatase", "Fatty Acids", "Fungi", "Larix", "Phosphorus", "04 agricultural and veterinary sciences", "15. Life on land", "Plant Roots", "Phosphates", "Plant Leaves", "Species Specificity", "Mycorrhizae", "Homeostasis", "0401 agriculture", " forestry", " and fisheries", "Biomass", "Phospholipids"]}, "links": [{"href": "https://doi.org/10.1111/nph.14083"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.14083", "name": "item", "description": "10.1111/nph.14083", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.14083"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-07-11T00:00:00Z"}}, {"id": "10.1111/nph.15123", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:23Z", "type": "Journal Article", "created": "2018-03-31", "title": "Quantifying soil moisture impacts on light use efficiency across biomes", "description": "Summary<p>   <p>Terrestrial primary productivity and carbon cycle impacts of droughts are commonly quantified using vapour pressure deficit (VPD) data and remotely sensed greenness, without accounting for soil moisture. However, soil moisture limitation is known to strongly affect plant physiology.</p>  <p>Here, we investigate light use efficiency, the ratio of gross primary productivity (GPP) to absorbed light. We derive its fractional reduction due to soil moisture (fLUE), separated from VPD and greenness changes, using artificial neural networks trained on eddy covariance data, multiple soil moisture datasets and remotely sensed greenness.</p>  <p>This reveals substantial impacts of soil moisture alone that reduce GPP by up to 40% at sites located in sub\uffe2\uff80\uff90humid, semi\uffe2\uff80\uff90arid or arid regions. For sites in relatively moist climates, we find, paradoxically, a muted fLUE response to drying soil, but reduced fLUE under wet conditions.</p>  <p>fLUE identifies substantial drought impacts that are not captured when relying solely on VPD and greenness changes and, when seasonally recurring, are missed by traditional, anomaly\uffe2\uff80\uff90based drought indices. Counter to common assumptions, fLUE reductions are largest in drought\uffe2\uff80\uff90deciduous vegetation, including grasslands. Our results highlight the necessity to account for soil moisture limitation in terrestrial primary productivity data products, especially for drought\uffe2\uff80\uff90related assessments.</p>  </p", "keywords": ["Time Factors", "550", "vapour pressure deficit", "Light", "Vapor Pressure", "Rain", "Eddy covariance", "02 engineering and technology", "01 natural sciences", "630", "Ecological applications", "Soil", "drought impacts", "Vapour pressure deficit", "Photosynthesis", "drought impacts; eddy covariance; gross primary productivity (GPP); light use efficiency; photosynthesis; soil moisture; standardized precipitation index; vapour pressure deficit (VPD)", "Plant biology", "2. Zero hunger", "Light use efficiency", "Ecology", "gross primary productivity (GPP)", "Biological Sciences", "6. Clean water", "Droughts", "Climate change impacts and adaptation", "gross primary productivity", "Neural Networks", "Plant Biology & Botany", "Drought impacts", "vapour pressure deficit (VPD)", "0207 environmental engineering", "Computer", "eddy covariance", "light use efficiency", "Ecosystem", "0105 earth and related environmental sciences", "photosynthesis", "Agricultural and Veterinary Sciences", "Research", "Gross primary productivity ()", "Water", "Humidity", "Plant Transpiration", "06 Biological Sciences", "15. Life on land", "standardized precipitation index", "13. Climate action", "vapour pressure deficit (VPD", "Standardized precipitation index", "07 Agricultural And Veterinary Sciences", "Soil moisture", "Neural Networks", " Computer", "soil moisture", "Climate Change Impacts and Adaptation", "Environmental Sciences"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.15123"}, {"href": "https://escholarship.org/content/qt3sb2745c/qt3sb2745c.pdf"}, {"href": "https://doi.org/10.1111/nph.15123"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.15123", "name": "item", "description": "10.1111/nph.15123", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.15123"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-03-31T00:00:00Z"}}, {"id": "10.1111/nph.15120", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:23Z", "type": "Journal Article", "created": "2018-04-02", "title": "Biocrust\u2010forming mosses mitigate the impact of aridity on soil microbial communities in drylands: observational evidence from three continents", "description": "Summary<p>   <p>Recent research indicates that increased aridity linked to climate change will reduce the diversity of soil microbial communities and shift their community composition in drylands, Earth's largest biome. However, we lack both a theoretical framework and solid empirical evidence of how important biotic components from drylands, such as biocrust\uffe2\uff80\uff90forming mosses, will regulate the responses of microbial communities to expected increases in aridity with climate change.</p>  <p>Here we report results from a cross\uffe2\uff80\uff90continental (North America, Europe and Australia) survey of 39 locations from arid to humid ecosystems, where we evaluated how biocrust\uffe2\uff80\uff90forming mosses regulate the relationship between aridity and the community composition and diversity of soil bacteria and fungi in dryland ecosystems.</p>  <p>Increasing aridity was negatively related to the richness of fungi, and either positively or negatively related to the relative abundance of selected microbial phyla, when biocrust\uffe2\uff80\uff90forming mosses were absent. Conversely, we found an overall lack of relationship between aridity and the relative abundance and richness of microbial communities under biocrust\uffe2\uff80\uff90forming mosses.</p>  <p>Our results suggest that biocrust\uffe2\uff80\uff90forming mosses mitigate the impact of aridity on the community composition of globally distributed microbial taxa, and the diversity of fungi. They emphasize the importance of maintaining biocrusts as a sanctuary for soil microbes in drylands.</p>  </p", "keywords": ["2. Zero hunger", "arid regions", "550", "Bacteria", "Fungi", "Bryophyta", "04 agricultural and veterinary sciences", "15. Life on land", "climatic changes", "mosses", "Soil", "13. Climate action", "XXXXXX - Unknown", "11. Sustainability", "Linear Models", "0401 agriculture", " forestry", " and fisheries", "Desert Climate", "soils", "Drylands", " Bacteria", " Fungi", " Biodiversity", " Microbial composition", " Aridity", "Ecosystem", "Soil Microbiology", "biodiversity"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.15120"}, {"href": "https://doi.org/10.1111/nph.15120"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.15120", "name": "item", "description": "10.1111/nph.15120", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.15120"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-04-02T00:00:00Z"}}, {"id": "10.1111/nph.15429", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-04-03T16:20:23Z", "type": "Journal Article", "created": "2018-09-21", "title": "Adapt your shuttling proteins for virulence: a lesson from the corn smut fungus Ustilago maydis", "description": "<p>This article is a Commentary on Krombach et\uffc2\uffa0al., 220: 553\uffe2\uff80\uff93566.</p>", "keywords": ["Fungal Proteins", "0301 basic medicine", "0303 health sciences", "03 medical and health sciences", "Virulence", "Fungi", "Ustilago", "Carrier Proteins", "Zea mays", "Plant Diseases"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.15429"}, {"href": "https://doi.org/10.1111/nph.15429"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.15429", "name": "item", "description": "10.1111/nph.15429", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.15429"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-09-20T00:00:00Z"}}, {"id": "10.1111/nph.16047", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:23Z", "type": "Journal Article", "created": "2019-07-08", "title": "Winter's bite: beech trees survive complete defoliation due to spring late\u2010frost damage by mobilizing old C reserves", "description": "Summary<p>   <p>Late frost can destroy the photosynthetic apparatus of trees. We hypothesized that this can alter the normal cyclic dynamics of C\uffe2\uff80\uff90reserves in the wood.</p>  <p>We measured soluble sugar concentrations and radiocarbon signatures (\uffce\uff9414C) of soluble nonstructural carbon (NSC) in woody tissues sampled from a Mediterranean beech forest that was completely defoliated by an exceptional late frost in 2016. We used the bomb radiocarbon approach to estimate the time elapsed since fixation of mobilized soluble sugars.</p>  <p>During the leafless period after the frost event, soluble sugar concentrations declined sharply while \uffce\uff9414C of NSC increased. This can be explained by the lack of fresh assimilate supply and a mobilization of C from reserve pools. Soluble NSC became increasingly older during the leafless period, with a maximum average age of 5\uffc2\uffa0yr from samples collected 27\uffc2\uffa0d before canopy recovery. Following leaf re\uffe2\uff80\uff90growth, soluble sugar concentrations increased and \uffce\uff9414C of soluble NSC decreased, indicating the allocation of new assimilates to the stem soluble sugars pool.</p>  <p>These data highlight that beech trees rapidly mobilize reserve C to survive strong source\uffe2\uff80\uff93sink imbalances, for example due to late frost, and show that NSC is a key trait for tree resilience under global change.</p>  </p", "keywords": ["580", "0106 biological sciences", "570", "late-frost leaf damage", "Fagus sylvatica", "bomb-radiocarbon (C-14)", "nonstructural carbon", "bomb-radiocarbon (14C)", "15. Life on land", "01 natural sciences", "Carbon", "Plant Leaves", "Freezing", "Fagus", "extreme weather event", "Carbohydrate Metabolism", "Carbon Radioisotopes", "Seasons", "resilience"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.16047"}, {"href": "https://doi.org/10.1111/nph.16047"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.16047", "name": "item", "description": "10.1111/nph.16047", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.16047"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-08-27T00:00:00Z"}}, {"id": "10.1111/nph.16866", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:23Z", "type": "Journal Article", "created": "2020-08-13", "title": "Integrating the evidence for a terrestrial carbon sink caused by increasing atmospheric CO 2", "description": "Summary<p>Atmospheric carbon dioxide concentration ([CO2]) is increasing, which increases leaf\uffe2\uff80\uff90scale photosynthesis and intrinsic water\uffe2\uff80\uff90use efficiency. These direct responses have the potential to increase plant growth, vegetation biomass, and soil organic matter; transferring carbon from the atmosphere into terrestrial ecosystems (a carbon sink). A substantial global terrestrial carbon sink would slow the rate of [CO2] increase and thus climate change. However, ecosystem CO2 responses are complex or confounded by concurrent changes in multiple agents of global change and evidence for a [CO2]\uffe2\uff80\uff90driven terrestrial carbon sink can appear contradictory. Here we synthesize theory and broad, multidisciplinary evidence for the effects of increasing [CO2] (iCO2) on the global terrestrial carbon sink. Evidence suggests a substantial increase in global photosynthesis since pre\uffe2\uff80\uff90industrial times. Established theory, supported by experiments, indicates that iCO2 is likely responsible for about half of the increase. Global carbon budgeting, atmospheric data, and forest inventories indicate a historical carbon sink, and these apparent iCO2 responses are high in comparison to experiments and predictions from theory. Plant mortality and soil carbon iCO2 responses are highly uncertain. In conclusion, a range of evidence supports a positive terrestrial carbon sink in response to iCO2, albeit with uncertain magnitude and strong suggestion of a role for additional agents of global change.</p>", "keywords": ["0106 biological sciences", "0301 basic medicine", "Carbon Sequestration", "CO fertilization", "550", "global carbon cycle", "Land-atmosphere feedback", "Climate Change", "01 natural sciences", "Carbon Cycle", "Global carbon cycle", "Terrestrial ecosystems", "03 medical and health sciences", "land\u2013atmosphere feedback", "forests and forestry", "atmospheric carbon dioxide", "XXXXXX - Unknown", "free-air CO enrichment (FACE)", "CO-fertilization hypothesis", "CO2-fertilization hypothesis", "CO2 fertilization", "Ecosystem", "0303 health sciences", "photosynthesis", "Beta factor", "Atmosphere", "500", "terrestrial ecosystems", "carbon dioxide", "Free-air CO2 enrichment (FACE)", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "carbon sequestration", "terrestrial ecosystems.", "Carbon dioxide", "13. Climate action", "[SDE]Environmental Sciences", "0401 agriculture", " forestry", " and fisheries", "beta factor", "[SDE.BE]Environmental Sciences/Biodiversity and Ecology", "ecosystems", "free-air CO2 enrichment (FACE)"]}, "links": [{"href": "https://eprints.whiterose.ac.uk/165394/1/Walker_et_al_200713_Draft7_submitted.pdf"}, {"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.16866"}, {"href": "https://doi.org/10.1111/nph.16866"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.16866", "name": "item", "description": "10.1111/nph.16866", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.16866"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-10-21T00:00:00Z"}}, {"id": "10.1111/nph.17065", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2020-11-05", "title": "Soil biodiversity enhances the persistence of legumes under climate change", "description": "Summary<p>   <p>Global environmental change poses threats to plant and soil biodiversity. Yet, whether soil biodiversity loss can further influence plant community\uffe2\uff80\uff99s response to global change is still poorly understood.</p>  <p>We created a gradient of soil biodiversity using the dilution\uffe2\uff80\uff90to\uffe2\uff80\uff90extinction approach, and investigated the effects of soil biodiversity loss on plant communities during and following manipulations simulating global change disturbances in experimental grassland microcosms.</p>  <p>Grass and herb biomass was decreased by drought and promoted by nitrogen deposition, and a fast recovery was observed following disturbances, independently of soil biodiversity loss. Warming promoted herb biomass during and following disturbance only when soil biodiversity was not reduced. However, legumes biomass was suppressed by these disturbances, and there were more detrimental effects with reduced soil biodiversity. Moreover, soil biodiversity loss suppressed the recovery of legumes following these disturbances. Similar patterns were found for the response of plant diversity. The changes in legumes might be partly attributed to the loss of mycorrhizal soil mutualists.</p>  <p>Our study shows that soil biodiversity is crucial for legume persistence and plant diversity maintenance when faced with environmental change, highlighting the importance of soil biodiversity as a potential buffering mechanism for plant diversity and community composition in grasslands.</p>  </p>", "keywords": ["2. Zero hunger", "0301 basic medicine", "570", "0303 health sciences", "warming", "Climate Change", "Fabaceae", "arbuscular mycorrhizal fungi", "Biodiversity", "drought", "plant\u2013soil interactions", "500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; Biologie", "15. Life on land", "Grassland", "nitrogen deposition", "Soil", "03 medical and health sciences", "biodiversity loss", "13. Climate action", "Biomass", "dilution-to-extinction approach", "Soil Microbiology"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.17065"}, {"href": "https://doi.org/10.1111/nph.17065"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.17065", "name": "item", "description": "10.1111/nph.17065", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.17065"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-12-08T00:00:00Z"}}, {"id": "10.1111/nph.17352", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2021-03-19", "title": "Simultaneous tree stem and soil greenhouse gas (CO2, CH4, N2O) flux measurements: a novel design for continuous monitoring towards improving flux estimates and temporal resolution", "description": "Summary<p>   <p>Tree stems and soils can act as sources and sinks for the greenhouse gases (GHG) carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O). Since both uptake and emission capacities can be large, especially in tropical rainforests, accurate assessments of the magnitudes and temporal variations of stem and soil GHG fluxes are required.</p>  <p>We designed a new flexible stem chamber system for continuously measuring GHG fluxes in a French Guianese rainforest. Here, we describe this new system, which is connected to an automated soil GHG flux system, and discuss measurement uncertainty and potential error sources.</p>  <p>In line with findings for soil GHG flux estimates, we demonstrated that lengthening the stem chamber closure time was required for accurate estimates of tree stem CH4 and N2O flux but not tree stem CO2 flux. The instrumented stem was a net source of CO2 and CH4 and a weak sink of N2O.</p>  <p>Our experimental setup operated successfully in situ and provided continuous tree and soil GHG measurements at a high temporal resolution over an 11\uffe2\uff80\uff90month period. This automated system is a major step forward in the measurement of GHG fluxes in stems and the atmosphere concurrently with soil GHG fluxes in tropical forest ecosystems.</p>  </p", "keywords": ["[SDE] Environmental Sciences", "0301 basic medicine", "Nitrous Oxide", "04 agricultural and veterinary sciences", "Carbon Dioxide", "15. Life on land", "01 natural sciences", "Trees", "Greenhouse Gases", "Soil", "03 medical and health sciences", "13. Climate action", "[SDE]Environmental Sciences", "0401 agriculture", " forestry", " and fisheries", "Methane", "Ecosystem", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/nph.17352"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.17352", "name": "item", "description": "10.1111/nph.17352", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.17352"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-19T00:00:00Z"}}, {"id": "10.1111/nph.17714", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2021-09-05", "title": "Mechanisms underpinning non-additivity of global change factor effects in the plant-soil system", "description": "Summary<p>Plant\uffe2\uff80\uff93soil systems are key for understanding the effects of factors of global change. Recent work has highlighted the general importance of considering the simultaneous incidence of some factors or stressors. To help mechanistically dissect the possible interactions of such factors, we here propose three broad groups of mechanisms that may generally lead to nonadditivity of responses within a plant\uffe2\uff80\uff93soil system: direct factor interactions (that is one factor directly changing another), within\uffe2\uff80\uff90plant information processing and crosstalk, and effects of factors on groups of soil biota interacting with plants. Interactions are also possible within and across these groups. Factor interactions are very likely to be present in experiments, especially when dealing with an increasing number of factors. Identifying the nature of such interactions will be essential for understanding and predicting global change impacts on plants and soil.</p>", "keywords": ["0301 basic medicine", "2. Zero hunger", "570", "0303 health sciences", "500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; Biologie", "Plants", "15. Life on land", "Biota", "plant\u2013soil systems", "stressor effects", "soil biota", "Soil", "03 medical and health sciences", "pollution", "Soil Microbiology", "global change"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.17714"}, {"href": "https://doi.org/10.1111/nph.17714"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.17714", "name": "item", "description": "10.1111/nph.17714", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.17714"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-20T00:00:00Z"}}, {"id": "10.1111/nph.17996", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2022-01-28", "title": "Effects of vegetation on soil cyanobacterial communities through time and space", "description": "Summary<p>   <p>Photoautotrophic soil cyanobacteria play essential ecological roles and are known to exhibit large changes in their diversity and abundance throughout early succession. However, much less is known about how and why soil cyanobacterial communities change as soil develops over centuries and millennia, and the effects that vegetation have on such communities.</p>  <p>We combined an extensive field survey, including 16 global soil chronosequences across contrasting ecosystems (from deserts to tropical forests), with molecular analyses to investigate how the diversity and abundance of photosynthetic and nonphotosynthetic soil cyanobacteria are affected by vegetation change during soil development, over time periods from hundreds to thousands of years.</p>  <p>We show that, in most chronosequences, the abundance, species richness and community composition of soil cyanobacteria are relatively stable as soil develops (from centuries to millennia). Regardless of soil age, forest chronosequences were consistently dominated by nonphotosynthetic cyanobacteria (Vampirovibrionia), while grasslands and shrublands were dominated by photosynthetic cyanobacteria. Chronosequences undergoing drastic vegetation shifts (e.g. transitions from grasslands to forests) experienced significant changes in the composition of soil cyanobacterial communities.</p>  <p>Our results advance our understanding of the ecology of cyanobacterial classes, and of the understudied nonphotosynthetic cyanobacteria in particular, and highlight the key role of vegetation as a major driver of their temporal dynamics as soil develops.</p>  </p", "keywords": ["16S amplicon sequencing", "Richness", "2. Zero hunger", "0301 basic medicine", "0303 health sciences", "Illumina sequencing", "Illuminasequencing", "Ecolog\u00eda", "Forests", "15. Life on land", "Cyanobacteria", "Soil chronosequence", "Soil", "03 medical and health sciences", "Non-photosynthetic cyanobacteria", "Abundance", "13. Climate action", "Richnes", "Nonphotosynthetic", "Ecosystem", "Soil Microbiology"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.17996"}, {"href": "https://doi.org/10.1111/nph.17996"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.17996", "name": "item", "description": "10.1111/nph.17996", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.17996"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-02-15T00:00:00Z"}}, {"id": "10.1111/nph.18264", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2022-06-10", "title": "Biotic and abiotic controls of nitrogen fixation in cyanobacteria\u2013moss associations", "description": "Summary<p>Most mosses are colonized by nitrogen (N)\uffe2\uff80\uff90fixing cyanobacteria. This discovery is relatively recent, which can explain the large knowledge gaps the field is now tackling. For instance, while we have a good understanding of the abiotic controls (e.g. nutrient availability, increased temperature), we still do not know much about the biotic controls of N2 fixation in mosses. I propose here that we should endeavour to position moss\uffe2\uff80\uff93cyanobacteria associations along the mutualism\uffe2\uff80\uff93parasitism continuum under varying abiotic conditions (e.g. nutrient availability). This would finally unravel the nature of the relationship between the partners and will be a big leap in our understanding of the evolution of plant\uffe2\uff80\uff93bacteria interactions using moss\uffe2\uff80\uff93cyanobacteria associations as a model system.</p>", "keywords": ["0301 basic medicine", "nutrient limitation", "0303 health sciences", "Nitrogen", "Bryophyta", "15. Life on land", "Cyanobacteria", "cyanobacteria", "symbiosis", "mosses", "03 medical and health sciences", "climate change", "nitrogen fixation", "Nitrogen Fixation", "DEPOSITION", "Symbiosis"], "contacts": [{"organization": "Rousk, Kathrin", "roles": ["creator"]}]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.18264"}, {"href": "https://doi.org/10.1111/nph.18264"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.18264", "name": "item", "description": "10.1111/nph.18264", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.18264"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-06-10T00:00:00Z"}}, {"id": "10.1111/nph.18387", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2020-04-18", "title": "RootPainter: deep learning segmentation of biological images with corrective annotation", "description": "<p>We present RootPainter, a GUI-based software tool for the rapid training of deep neural networks for use in biological image analysis. RootPainter facilitates both fully-automatic and semi-automatic image segmentation. We investigate the effectiveness of RootPainter using three plant image datasets, evaluating its potential for root length extraction from chicory roots in soil, biopore counting and root nodule counting from scanned roots. We also use RootPainter to compare dense annotations to corrective ones which are added during the training based on the weaknesses of the current model.</p>", "keywords": ["Buildings and machinery", "0301 basic medicine", "phenotyping", "root nodule", "biopore", "interactive machine learning", "Research", "segmentation", "deep learning", "rhizotron", "Breeding and genetics", "Machine Learning", "Soil", "03 medical and health sciences", "Deep Learning", "GUI", "Farm nutrient management", "Image Processing", " Computer-Assisted", "Neural Networks", " Computer"]}, "links": [{"href": "https://www.biorxiv.org/content/10.1101/2020.04.16.044461v1.full.pdf"}, {"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.18387"}, {"href": "https://doi.org/10.1111/nph.18387"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.18387", "name": "item", "description": "10.1111/nph.18387", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.18387"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-04-18T00:00:00Z"}}, {"id": "10.1111/nph.18798", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2023-02-08", "title": "Plant phenology and species\u2010specific traits control plant CH4 emissions in a northern boreal fen", "description": "Summary<p> <p>Aerenchymatic transport is an important mechanism through which plants affect methane (CH4) emissions from peatlands. Controlling environmental factors and the effects of plant phenology remain, however, uncertain.</p> <p>We identified factors controlling seasonal CH4 flux rate and investigated transport efficiency (flux rate per unit of rhizospheric porewater CH4 concentration). We measured CH4 fluxes through individual shoots of Carex rostrata, Menyanthes trifoliata, Betula nana and Salix lapponum throughout growing seasons in 2020 and 2021 and Equisetum fluviatile and Comarum palustre in high summer 2021 along with water\uffe2\uff80\uff90table level, peat temperature and porewater CH4 concentration.</p> <p>CH4 flux rate of C. rostrata was related to plant phenology and peat temperature. Flux rates of M. trifoliata and shrubs B. nana and S. lapponum were insensitive to the investigated environmental variables. In high summer, flux rate and efficiency were highest for C. rostrata (6.86\uffe2\uff80\uff89mg\uffe2\uff80\uff89m\uffe2\uff88\uff922\uffc2\uffa0h\uffe2\uff88\uff921 and 0.36\uffe2\uff80\uff89mg\uffe2\uff80\uff89m\uffe2\uff88\uff922\uffc2\uffa0h\uffe2\uff88\uff921 (\uffce\uffbcmol\uffe2\uff80\uff89l\uffe2\uff88\uff921)\uffe2\uff88\uff921, respectively). Menyanthes trifoliata showed a high flux rate, but limited efficiency. Low flux rates and efficiency were detected for the remaining species.</p> <p>Knowledge of the species\uffe2\uff80\uff90specific CH4 flux rate and their different responses to plant phenology and environmental factors can significantly improve the estimation of ecosystem\uffe2\uff80\uff90scale CH4 dynamics in boreal peatlands.</p> </p", "keywords": ["550", "Herbs", "Peatlands", "plant-enclosure", "metaani", "kosteikot", "Soil", "11. Sustainability", "peatlands", "Ecosystem", "580", "2. Zero hunger", "plant methane (CH4) transport", "porewater CH4 concentration", "Temperature", "temperature", "herbs", "Carbon Dioxide", "15. Life on land", "11831 Plant biology", "shrubs", "13. Climate action", "kosteikkokasvit", "Wetlands", "ta1181", "Plant-enclosure", "Shrubs", "Seasons", "Methane"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.18798"}, {"href": "https://doi.org/10.1111/nph.18798"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.18798", "name": "item", "description": "10.1111/nph.18798", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.18798"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-03-07T00:00:00Z"}}, {"id": "10.3389/fenvs.2021.709391", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:22:16Z", "type": "Journal Article", "created": "2021-08-10", "title": "Nitrogen Deposition Effects on Soil Properties, Microbial Abundance, and Litter Decomposition Across Three Shrublands Ecosystems From the Mediterranean Basin", "description": "<p>Atmospheric nitrogen (N) inputs in the Mediterranean Basin are projected to increase due to fossil fuel combustion, fertilizer use, and the exacerbation of agricultural production processes. Although increasing N deposition is recognized as a major threat to ecosystem functioning, little is known about how local environmental conditions modulate ecosystem function response to N addition, particularly in the context of Mediterranean-Basin ecosystems. Here, we assess how N addition affects important ecosystem properties associated with litter decomposition, soil physical-chemical properties, soil extracellular enzymatic activity and microbial abundance across three long-term N addition experimental sites in the Mediterranean Basin. Sites were located in El Regajal (Madrid, Spain), Capo Caccia (Alghero, Italy), and Arr\uffc3\uffa1bida (Lisbon, Portugal) and are all representative of Mediterranean shrublands. No common pattern for litter decomposition process or other studied variables emerged among the control plots of the studied sites. Nitrogen supply only affected soil pH, a major driver of decomposition, in two out of three experimental sites. Moreover, when we explored the role of N addition and soil pH in controlling litter decay, we found that the effects of these factors were site-dependent. Our results point out to local ecosystem features modulating N addition effects in controlling litter decomposition rates in Mediterranean ecosystems, suggesting that the responses of soil functioning to N deposition are site-dependent. These findings provide further knowledge to understand contrasting ecosystem responses to N additions based on a single field experiments.</p>", "keywords": ["Ecolog\u00eda (Biolog\u00eda)", "Coordinated research networks", "anthropogenic disturbance", "Soil organic matter decomposition", "Tea bag index", "air pollution", "tea bag index", "Air pollution", "Edafolog\u00eda (Biolog\u00eda)", "air pollution; anthropogenic disturbance; coordinated research networks; mediterranean semiarid ecosystems; soil extracellular enzymatic activity; soil organic matter decomposition; spatial and temporal heterogeneity; tea bag index", "spatial and temporal heterogeneity", "Mediterranean semiarid ecosystems", "XXXXXX - Unknown", "Soil extracellular enzymatic activity", "GE1-350", "574.4(4-13)", "2. Zero hunger", "coordinated research networks", "Edafolog\u00eda", "04 agricultural and veterinary sciences", "Ecolog\u00eda", "631.4(4-13)", "15. Life on land", "mediterranean semiarid ecosystems", "6. Clean water", "Spatial and temporal heterogeneity", "Environmental sciences", "2401.06 Ecolog\u00eda animal", "13. Climate action", "Anthropogenic disturbance", "0401 agriculture", " forestry", " and fisheries", "soil organic matter decomposition", "soil extracellular enzymatic activity"]}, "links": [{"href": "https://iris.uniss.it/bitstream/11388/274359/2/fenvs-09-709391.pdf"}, {"href": "https://doi.org/10.3389/fenvs.2021.709391"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Environmental%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fenvs.2021.709391", "name": "item", "description": "10.3389/fenvs.2021.709391", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fenvs.2021.709391"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-08-10T00:00:00Z"}}, {"id": "10.1111/nph.18120", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2022-03-28", "title": "Solar radiation drives methane emissions from the shoots of Scots pine", "description": "Summary<p>   <p>Plants are recognized as sources of aerobically produced methane (CH4), but the seasonality, environmental drivers and significance of CH4 emissions from the canopies of evergreen boreal trees remain poorly understood.</p>  <p>We measured the CH4 fluxes from the shoots of Pinus sylvestris (Scots pine) and Picea abies (Norway spruce) saplings in a static, non\uffe2\uff80\uff90steady\uffe2\uff80\uff90state chamber setup to investigate if the shoots of boreal conifers are a source of CH4 during spring.</p>  <p>We found that the shoots of Scots pine emitted CH4 and these emissions correlated with the photosynthetically active radiation. For Norway spruce, the evidence for CH4 emissions from the shoots was inconclusive.</p>  <p>Our study shows that the canopies of evergreen boreal trees are a potential source of CH4 in the spring and that these emissions are driven by a temperature\uffe2\uff80\uff90by\uffe2\uff80\uff90light interaction effect of solar radiation either directly or indirectly through its effects on tree physiological processes.</p>  </p", "keywords": ["0301 basic medicine", "Research", "Pinus sylvestris", "15. Life on land", "11831 Plant biology", "Plant-mediated emissions", "Pinus", "methane (CH4)", "01 natural sciences", "Trees", "03 medical and health sciences", "Boreal forests", "13. Climate action", "Evergreen trees", "Aerobic methane production", "Picea", "Methane", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.18120"}, {"href": "https://doi.org/10.1111/nph.18120"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.18120", "name": "item", "description": "10.1111/nph.18120", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.18120"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-04-12T00:00:00Z"}}, {"id": "10.1111/nph.18309", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2022-06-15", "title": "Recent and ancient evolutionary events shaped plant elemental composition of edaphic endemics: a phylogeny\u2010wide analysis of Iberian gypsum plants", "description": "Summary<p><p>The analysis of plant elemental composition and the underlying factors affecting its variation are a current hot topic in ecology. Ecological adaptation to atypical soils may shift plant elemental composition. However, no previous studies have evaluated its relevance against other factors such as phylogeny, climate or individual soil conditions.</p><p>We evaluated the effect of the phylogeny, environment (climate, soil), and affinity to gypsum soils on the elemental composition of 83 taxa typical of Iberian gypsum ecosystems. We used a new statistical procedure (multiple phylogenetic variance decomposition, MPVD) to decompose total explained variance by different factors across all nodes in the phylogenetic tree of target species (covering 120\uffe2\uff80\uff89million\uffe2\uff80\uff89years of Angiosperm evolution).</p><p>Our results highlight the relevance of phylogeny on the elemental composition of plants both at early (with the development of key preadaptive traits) and recent divergence times (diversification of the Iberian gypsum flora concurrent with Iberian gypsum deposit accumulation). Despite the predominant phylogenetic effect, plant adaptation to gypsum soils had a strong impact on the elemental composition of plants, particularly on sulphur concentrations, while climate and soil effects were smaller.</p><p>Accordingly, we detected a convergent evolution of gypsum specialists from different lineages on increased sulphur and magnesium foliar concentrations.</p></p", "keywords": ["2. Zero hunger", "0106 biological sciences", "0301 basic medicine", "Research", "Variance partitioning", "Plants", "15. Life on land", "Multiple phylogenetic variance decomposition (MPVD)", "Calcium Sulfate", "01 natural sciences", "Stoichiometry", "Ionome", "Soil", "03 medical and health sciences", "Biogeochemical niche", "13. Climate action", "Ionome multiple phylogenetic variance decomposition (MPVD)", "Edaphic endemics", "Phylogenetic effects", "Gypsophile", "Ecosystem", "Phylogeny", "Sulfur"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.18309"}, {"href": "https://doi.org/10.1111/nph.18309"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.18309", "name": "item", "description": "10.1111/nph.18309", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.18309"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-07-13T00:00:00Z"}}, {"id": "10.1111/nph.18631", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2022-11-22", "title": "A research agenda for nonvascular photoautotrophs under climate change", "description": "Summary<p>Nonvascular photoautotrophs (NVP), including bryophytes, lichens, terrestrial algae, and cyanobacteria, are increasingly recognized as being essential to ecosystem functioning in many regions of the world. Current research suggests that climate change may pose a substantial threat to NVP, but the extent to which this will affect the associated ecosystem functions and services is highly uncertain. Here, we propose a research agenda to address this urgent question, focusing on physiological and ecological processes that link NVP to ecosystem functions while also taking into account the substantial taxonomic diversity across multiple ecosystem types. Accordingly, we developed a new categorization scheme, based on microclimatic gradients, which simplifies the high physiological and morphological diversity of NVP and world\uffe2\uff80\uff90wide distribution with respect to several broad habitat types. We found that habitat\uffe2\uff80\uff90specific ecosystem functions of NVP will likely be substantially affected by climate change, and more quantitative process understanding is required on: (1) potential for acclimation; (2) response to elevated CO2; (3)\uffc2\uffa0role of the microbiome; and (4) feedback to (micro)climate. We suggest an integrative approach of innovative, multimethod laboratory and field experiments and ecophysiological modelling, for which sustained scientific collaboration on NVP research will be essential.</p", "keywords": ["epiphytes", "nonvascular vegetation", "0106 biological sciences", "model\u2013data integration", "Lichens", "Climate Change", "biocrusts", "Bryophyta", "Plants", "15. Life on land", "01 natural sciences", "climate change", "lichens and bryophytes", "13. Climate action", "biocrusts; climate change; ecosystem services; epiphytes; functional traits; lichens and bryophytes; model-data integration; nonvascular vegetation", "functional traits", "ecosystem services", "biocrusts; climate change; ecosystem services; epiphytes; functional traits; lichens and bryophytes; model-data integration; nonvascular vegetation.", "Ecosystem", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://iris.unige.it/bitstream/11567/1100674/2/New%20Phytologist%20-%202023%20-%20Porada%20-%20A%20research%20agenda%20for%20nonvascular%20photoautotrophs%20under%20climate%20change.pdf"}, {"href": "https://cris.unibo.it/bitstream/11585/917373/2/New%20Phytologist%20-%202022%20-%20Porada%20-%20A%20research%20agenda%20for%20nonvascular%20photoautotrophs%20under%20climate%20change.pdf"}, {"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.18631"}, {"href": "https://doi.org/10.1111/nph.18631"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.18631", "name": "item", "description": "10.1111/nph.18631", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.18631"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-12-13T00:00:00Z"}}, {"id": "10.1111/nph.19450", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2023-11-30", "title": "A step forward in fungal biomass estimation \u2013 a new protocol for more precise measurements of soil ergosterol with liquid chromatography\u2010mass spectrometry and comparison of extraction methods", "description": "Significant differences between ergosterol protocols and their yield call for harmonization of methodologies. We propose an extraction protocol with KOH in methanol with cyclohexane for liquid\u2013liquid extraction. The novel LC\u2013MS method proved to be superior to the HPLC-UV method for soil samples because of the higher quality of the peaks and the possibility of following peak purity. Moreover, the LC\u2013MS method has 10 times lower detection limit than that of HPLC-UV.", "keywords": ["Soil", "selected ion recording", "Liquid Chromatography-Mass Spectrometry", "Ergosterol", "mineral soil", "ta1182", "Fungi", "ergosterol fragmentation", "Biomass", "540", "forest soil", "peatlands", "Soil Microbiology"]}, "links": [{"href": "https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/nph.19450"}, {"href": "https://doi.org/10.1111/nph.19450"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.19450", "name": "item", "description": "10.1111/nph.19450", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.19450"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-11-29T00:00:00Z"}}, {"id": "10.1111/nph.19112", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2023-06-29", "title": "Gold\u2010FISH enables targeted NanoSIMS analysis of plant\u2010associated bacteria", "description": "Summary<p> <p>Bacteria colonize plant roots and engage in reciprocal interactions with their hosts. However, the contribution of individual taxa or groups of bacteria to plant nutrition and fitness is not well characterized due to a lack of in\uffc2\uffa0situ evidence of bacterial activity.</p> <p>To address this knowledge gap, we developed an analytical approach that combines the identification and localization of individual bacteria on root surfaces via gold\uffe2\uff80\uff90based in\uffc2\uffa0situ hybridization with correlative NanoSIMS imaging of incorporated stable isotopes, indicative of metabolic activity.</p> <p>We incubated Kosakonia strain DS\uffe2\uff80\uff901\uffe2\uff80\uff90associated, gnotobiotically grown rice plants with 15N\uffe2\uff80\uff93N2 gas to detect in\uffc2\uffa0situ N2 fixation activity. Bacterial cells along the rhizoplane showed\uffc2\uffa0heterogeneous patterns of 15N enrichment, ranging from the natural isotope abundance levels up to 12.07 at% 15N (average and median of 3.36 and 2.85 at% 15N, respectively, n\uffe2\uff80\uff89=\uffe2\uff80\uff89697 cells).</p> <p>The presented correlative optical and chemical imaging analysis is applicable to a broad range of studies investigating plant\uffe2\uff80\uff93microbe interactions. For example, it enables verification of the in\uffc2\uffa0situ metabolic activity of host\uffe2\uff80\uff90associated commercialized strains or plant growth\uffe2\uff80\uff90promoting bacteria, thereby disentangling their role in plant nutrition. Such data facilitate the design of plant\uffe2\uff80\uff93microbe combinations for improvement of crop management.</p> </p", "keywords": ["2. Zero hunger", "106022 Mikrobiologie", "rhizosphere bacteria", "Bacteria", "plant growth-promoting bacteria", "plant\u2013microbe interaction", "Research", "Oryza", "biological nitrogen fixation", "Plants", "microbial activity", "in\u00a0situ hybridization", "Plant Roots", "106026 \u00d6kosystemforschung", "Rhizosphere", "106022 Microbiology", "NanoSIMS", "in situ hybridization", "106026 Ecosystem research", "In situ hybridization", "In Situ Hybridization", "Soil Microbiology", "plant-microbe interaction"]}, "links": [{"href": "https://doi.org/10.1111/nph.19112"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.19112", "name": "item", "description": "10.1111/nph.19112", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.19112"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-06-28T00:00:00Z"}}, {"id": "10.1111/nph.20145", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2024-10-01", "title": "What determines transfer of carbon from plants to mycorrhizal fungi?", "description": "Summary<p>Biological Market Models are common evolutionary frameworks to understand the maintenance of mutualism in mycorrhizas. \uffe2\uff80\uff98Surplus C\uffe2\uff80\uff99 hypotheses provide an alternative framework where stoichiometry and source\uffe2\uff80\uff93sink dynamics govern mycorrhizal function. A critical difference between these frameworks is whether carbon transfer from plants is regulated by nutrient transfer from fungi or through source\uffe2\uff80\uff93sink dynamics. In this review, we: provide a historical perspective; summarize studies that asked whether plants transfer more carbon to fungi that transfer more nutrients; conduct a meta\uffe2\uff80\uff90analysis to assess whether mycorrhizal plant growth suppressions are related to carbon transfer; and review literature on cellular mechanisms for carbon transfer. In sum, current knowledge does not indicate that carbon transfer from plants is directly regulated by nutrient delivery from fungi. Further, mycorrhizal plant growth responses were linked to nutrient uptake rather than carbon transfer. These findings are more consistent with \uffe2\uff80\uff98Surplus C\uffe2\uff80\uff99 hypotheses than Biological Market Models. However, we also identify research gaps, and future research may uncover a mechanism directly linking carbon and nutrient transfer. Until then, we urge caution when applying economic terminology to describe mycorrhizas. We present a synthesis of ideas, consider knowledge gaps, and suggest experiments to advance the field.</p", "keywords": ["106022 Mikrobiologie", "sanctions and rewards", "membrane transport", "comparative advantage", "Biological Transport", "mycorrhizas", "transporters", "Plants", "symbiosis", "Carbon", "106026 \u00d6kosystemforschung", "Mycorrhizae", "functional equilibrium", "106022 Microbiology", "106026 Ecosystem research", "Symbiosis", "shading"], "contacts": [{"organization": "Rebecca A. Bunn, Ana Corr\u00eaa, Jaya Joshi, Christina Kaiser, Ylva Lekberg, Cindy E. Prescott, Anna Sala, Justine Karst,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1111/nph.20145"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.20145", "name": "item", "description": "10.1111/nph.20145", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.20145"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-10-01T00:00:00Z"}}, {"id": "10.1111/nph.20401", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2025-01-17", "title": "Insights into the subdaily variations in methane, nitrous oxide and carbon dioxide fluxes from upland tropical tree stems", "description": "Summary<p> <p>Recent studies have shown that stem fluxes, although highly variable among trees, can alter the strength of the methane (CH4) sink or nitrous oxide (N2O) source in some forests, but the patterns and magnitudes of these fluxes remain unclear. This study investigated the drivers of subdaily and seasonal variations in stem and soil CH4, N2O and carbon dioxide (CO2) fluxes.</p> <p>CH4, N2O and CO2 fluxes were measured continuously for 19\uffe2\uff80\uff89months in individual stems of two tree species, Eperua falcata (Aubl.) and Lecythis poiteaui (O. Berg), and surrounding soils using an automated chamber system in an upland tropical forest. Subdaily variations in these fluxes were related to environmental and stem physiological (sap flow and stem diameter variations) measurements under contrasting soil water conditions.</p> <p>The results showed that physiological and climatic drivers only partially explained the subdaily flux variations. Stem CH4 and CO2 emissions and N2O uptake varied with soil water content, time of day and between individuals. Stem fluxes decoupled from soil fluxes.</p> <p>Our study contributes to understanding the regulation of stem greenhouse gas fluxes. It suggests that additional variables (e.g. internal gas concentrations, wood\uffe2\uff80\uff90colonising microorganisms, wood density and anatomy) may account for the remaining unexplained variability in stem fluxes, highlighting the need for further studies.</p> </p", "keywords": ["rain-forest", "tree stem", "Nitrous Oxide", "spatial variation", "soil", "Trees", "Soil", "climate", "Biology", "Tropical Climate", "nitrous oxide", "subdaily variations", "Plant Stems", "methane", "exchange", "emissions", "temperature", "carbon dioxide", "Water", "Carbon Dioxide", "co2 efflux rates", "flux", "upland tropical forest", "soil co2", "living trees", "Seasons", "Methane", "respiration"], "contacts": [{"organization": "La\u00ebtitia M. Br\u00e9chet, Roberto L. Salom\u03ccn, Katerina Machacova, Cl\u00e9ment Stahl, Beno\u00eet Burban, Jean\u2010Yves Goret, Kathy Steppe, Damien Bonal, Ivan A. Janssens,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1111/nph.20401"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/New%20Phytologist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nph.20401", "name": "item", "description": "10.1111/nph.20401", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nph.20401"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-17T00:00:00Z"}}, {"id": "10.1111/nyas.14357", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:24Z", "type": "Journal Article", "created": "2020-05-08", "title": "Atmospheric heat and moisture transport to energy\u2010 and water\u2010limited ecosystems", "description": "Abstract<p>The land biosphere is a crucial component of the Earth system that interacts with the atmosphere in a complex manner through manifold feedback processes. These relationships are bidirectional, as climate affects our terrestrial ecosystems, which, in turn, influence climate. Great progress has been made in understanding the local interactions between the terrestrial biosphere and climate, but influences from remote regions through energy and water influxes to downwind ecosystems remain less explored. Using a Lagrangian trajectory model driven by atmospheric reanalysis data, we show how heat and moisture advection affect gross carbon production at interannual scales and in different ecoregions across the globe. For water\uffe2\uff80\uff90limited regions, results show a detrimental effect on ecosystem productivity during periods of enhanced heat and reduced moisture advection. These periods are typically associated with winds that disproportionately come from continental source regions, as well as positive sensible heat flux and negative latent heat flux anomalies in those upwind locations. Our results underline the vulnerability of ecosystems to the occurrence of upwind climatic extremes and highlight the importance of the latter for the spatiotemporal propagation of ecosystem disturbances.</p>", "keywords": ["Agriculture and Food Sciences", "LAND", "DISPERSION MODEL FLEXPART", "atmospheric advection", "Climate Change", "drought", "01 natural sciences", "CARBON", "ENTRAINMENT", "SURFACE EVAPORATION", "Ecosystem", "0105 earth and related environmental sciences", "CLIMATE-CHANGE", "Atmosphere", "Water", "Original Articles", "Models", " Theoretical", "15. Life on land", "PART I", "13. Climate action", "PRECIPITATION", "EUROPE-WIDE REDUCTION", "land-atmosphere interactions", "Seasons", "ecosystems", "terrestrial carbon cycle", "PRIMARY PRODUCTIVITY"]}, "links": [{"href": "https://doi.org/10.1111/nyas.14357"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Annals%20of%20the%20New%20York%20Academy%20of%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/nyas.14357", "name": "item", "description": "10.1111/nyas.14357", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/nyas.14357"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-05-07T00:00:00Z"}}, {"id": "10.1111/pbi.13678", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:25Z", "type": "Journal Article", "created": "2021-08-04", "title": "Pangenome of white lupin provides insights into the diversity of the species", "description": "Summary<p>White lupin is an old crop with renewed interest due to its seed high protein content and high nutritional value. Despite a long domestication history in the Mediterranean basin, modern breeding efforts have been fairly scarce. Recent sequencing of its genome has provided tools for further description of genetic resources but detailed characterization of genomic diversity is still missing. Here, we report the genome sequencing of 39 accessions that were used to establish a white lupin pangenome. We defined 32\uffe2\uff80\uff89068 core genes that are present in all individuals and 14\uffe2\uff80\uff89822 that are absent in some and may represent a gene pool for breeding for improved productivity, grain quality, and stress adaptation. We used this new pangenome resource to identify candidate genes for alkaloid synthesis, a key grain quality trait. The white lupin pangenome provides a novel genetic resource to better understand how domestication has shaped the genomic variability within this crop. Thus, this pangenome resource is an important step towards the effective and efficient genetic improvement of white lupin to help meet the rapidly growing demand for plant protein sources for human and animal consumption.</p>", "keywords": ["0301 basic medicine", "white lupin", "pangenome", "[SDV.BIO]Life Sciences [q-bio]/Biotechnology", "http://aims.fao.org/aos/agrovoc/c_49985", "630", "diversit\u00e9 g\u00e9n\u00e9tique (comme ressource)", "Domestication", "domestication", "03 medical and health sciences", "ressource g\u00e9n\u00e9tique v\u00e9g\u00e9tale", "[SDV.BV]Life Sciences [q-bio]/Vegetal Biology", "[SDV.BV] Life Sciences [q-bio]/Vegetal Biology", "http://aims.fao.org/aos/agrovoc/c_37418", "http://aims.fao.org/aos/agrovoc/c_37419", "http://aims.fao.org/aos/agrovoc/c_3224", "http://aims.fao.org/aos/agrovoc/c_33952", "Research Articles", "ressource g\u00e9n\u00e9tique animale", "2. Zero hunger", "0303 health sciences", "g\u00e9nome", "phytog\u00e9n\u00e9tique", "http://aims.fao.org/aos/agrovoc/c_27583", "Chromosome Mapping", "600", "s\u00e9quence nucl\u00e9otidique", "15. Life on land", "variation g\u00e9n\u00e9tique", "plant diversity", "[SDV.BIO] Life Sciences [q-bio]/Biotechnology", "Lupinus", "Plant Breeding", "http://aims.fao.org/aos/agrovoc/c_15975", "Genome", " Plant"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/pbi.13678"}, {"href": "https://doi.org/10.1111/pbi.13678"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%20Biotechnology%20Journal", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/pbi.13678", "name": "item", "description": "10.1111/pbi.13678", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/pbi.13678"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-06-22T00:00:00Z"}}, {"id": "10.1111/pce.14124", "type": "Feature", "geometry": null, "properties": {"updated": "2026-04-03T16:20:25Z", "type": "Journal Article", "created": "2021-06-07", "title": "The size and the age of the metabolically active carbon in tree roots", "description": "Abstract<p>Little is known about the sources and age of C respired by tree roots. Previous research in stems identified two functional pools of non\uffe2\uff80\uff90structural carbohydrates (NSC): an \uffe2\uff80\uff9cactive\uffe2\uff80\uff9d pool supplied directly from canopy photo\uffe2\uff80\uff90assimilates supporting metabolism and a \uffe2\uff80\uff9cstored\uffe2\uff80\uff9d pool used when fresh C supplies are limited. We compared the C isotope composition of water\uffe2\uff80\uff90soluble NSC and respired CO2for aspen roots (Populus tremulahybrids) cut off from fresh C supply after stem\uffe2\uff80\uff90girdling or prolonged incubation of excised roots. We used bomb radiocarbon to estimate the time elapsed since C fixation for respired CO2, water\uffe2\uff80\uff90soluble NSC and structural \uffce\uffb1\uffe2\uff80\uff90cellulose. While freshly excised roots (mostly &lt;2.9\uffe2\uff80\uff89mm in diameter) respired CO2fixed &lt;1\uffc2\uffa0year previously, the age increased to 1.6\uffe2\uff80\uff932.9\uffc2\uffa0year within a week after root excision. Freshly excised roots from trees girdled ~3\uffc2\uffa0months ago had respiration rates and NSC stocks similar to un\uffe2\uff80\uff90girdled trees but respired older C (~1.2\uffc2\uffa0year). We estimate that over 3\uffc2\uffa0months NSC in girdled roots must be replaced 5\uffe2\uff80\uff937 times by reserves remobilized from root\uffe2\uff80\uff90external sources. Using a mixing model and observed correlations between \uffce\uff9414C of water\uffe2\uff80\uff90soluble C and \uffce\uffb1\uffe2\uff80\uff90cellulose, we estimate ~30% of C is \uffe2\uff80\uff9cactive\uffe2\uff80\uff9d (~5\uffc2\uffa0mg C g\uffe2\uff88\uff921).</p", "keywords": ["0106 biological sciences", "Carbon Isotopes", "Carbon Dioxide", "Forests", "15. Life on land", "Plant Roots", "01 natural sciences", "Carbon", "Trees", "Populus", "Germany", "Carbohydrate Metabolism", "Carbon Radioisotopes", "Cellulose"]}, "links": [{"href": "https://onlinelibrary.wiley.com/doi/pdf/10.1111/pce.14124"}, {"href": "https://doi.org/10.1111/pce.14124"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Plant%2C%20Cell%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/pce.14124", "name": "item", "description": "10.1111/pce.14124", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/pce.14124"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-04-09T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=se&offset=2300&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=se&offset=2300&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "prev", "title": "items (prev)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=se&offset=2250", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=se&offset=2350", "hreflang": "en-US"}], "numberMatched": 10456, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-04-04T10:20:09.410549Z"}