{"type": "FeatureCollection", "features": [{"id": "10.1016/j.jhydrol.2021.126551", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:16:36Z", "type": "Journal Article", "created": "2021-06-08", "title": "Smartphone-based tension disc infiltrometer for soil hydraulic characterisation", "description": "31 Pags.- 18 Figs.- 1 Tabl.  The definitive version is available at: https://www.sciencedirect.com/science/journal/00221694 The tension disc infiltrometer has become a widespread method to measure soil hydraulic properties under unsaturated conditions. Although several automated devices have been developed, most designs include an elongated water reservoir and a pressure transducer with electronic components to register the water level, increasing its cost and limiting its application. The objective of this work is to present a new tension disc infiltrometer with a compact design of 10 cm diameter and height, where the water level is monitored by a smartphone camera. The infiltration curve is determined from the automated analysis of the images recorded by the smartphone without additional electronic components. The device was first validated in the laboratory by comparing visual measurements (V), the camera imagery (Ca) and a pressure transducer (PT). Next, it was tested on field infiltration experiments. Robust fits (R2 = 0.99) were found between the water level measured with Ca in the laboratory and those obtained with V and PT procedures. The Ca method is accurate, robust and independent of the relative camera position. Good fits were also observed between Ca water level and those obtained with PT in the field experiments. Similar hydraulic conductivity and sorptivity values were obtained with both sensors using the numerical solution of the Haverkamp (NSH) equation. The compact infiltrometer, in conjunction with the smartphone camera, is an accurate, accessible, portable and easy-to-use field-based device for soil hydraulic characterisation. This research was supported by the MINECO project ASBIO (PGC2018-094332-B-100) and the European Union\u2019s Horizon 2020 research and innovation program under grant agreement No [H2020-MSCA-RISE-777803]. Peer reviewed", "keywords": ["Automated single-ring infiltrometer", "Compact design", "0207 environmental engineering", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "02 engineering and technology", "Soil hydraulic properties", "Infiltration rate measurements", "NSH", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.1016/j.jhydrol.2021.126551"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Hydrology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.jhydrol.2021.126551", "name": "item", "description": "10.1016/j.jhydrol.2021.126551", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.jhydrol.2021.126551"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-09-01T00:00:00Z"}}, {"id": "10.1016/j.polymertesting.2025.108824", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:16:41Z", "type": "Journal Article", "created": "2025-04-26", "title": "A cost-effective protocol for detecting fluorescent microplastics in arable soils to study redistribution processes", "description": "Understanding microplastics' (MPs) transport from soils to aquatic ecosystems is challenging due to labor-intensive detection methods, especially in large-scale plot experiments analyzing surface runoff and soil erosion. To address this, we used fluorescent MPs as tracers and developed a cost-effective protocol to detect them in dry soils and eroded sediments. We analyzed spherical polyethylene (PE: 125\u2013150\u00a0\u03bcm; 425\u2013500\u00a0\u03bcm) and irregular polylactic acid (PLA: 125\u2013150\u00a0\u03bcm; 250\u2013300\u00a0\u03bcm). Sample assays were prepared primarily based on dry and wet sieving. Subsequent darkroom photography under 365\u00a0nm illumination, and thresholding and segmentation-based image analysis were done. The developed protocol demonstrates high reliability, precision, and F-scores of 88.7\u00a0%\u00a0\u00b1\u00a02.9\u00a0%, 85.2\u00a0%\u00a0\u00b1\u00a03.1\u00a0%, and 86.9\u00a0%\u00a0\u00b1\u00a02.8\u00a0%. PE exhibited slightly higher recovery rates (85\u00a0%\u00a0\u00b1\u00a05\u00a0%) than PLA (79\u00a0%\u00a0\u00b1\u00a08\u00a0%). Particle size influenced recovery, with larger MPs achieving significantly higher recovery. Smaller particles showed slightly lower recovery under dry soil conditions, but their recovery improved under sediment conditions facilitated by wet sieving and ultrasonication. All fluorescent MPs retained >95\u00a0% detectability after three months of storage, highlighting marker temporal stability. Compared to existing methods, this protocol eliminates complex digestion steps, reduces costs, and ensures minimal contamination, providing a robust framework for MP transport studies. It offers potential for enhancement through advanced imaging and machine learning, enabling more efficient and accessible detection in environmental research.", "keywords": ["Soil", "Microplastic transport", "Identification", "TP1080-1185", "Sediment monitoring", "Polymers and polymer manufacture", "Surface runoff", "Fluorescence"]}, "links": [{"href": "https://doi.org/10.1016/j.polymertesting.2025.108824"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Polymer%20Testing", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.polymertesting.2025.108824", "name": "item", "description": "10.1016/j.polymertesting.2025.108824", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.polymertesting.2025.108824"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-06-01T00:00:00Z"}}, {"id": "10.1016/j.scitotenv.2004.01.026", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:16:44Z", "type": "Journal Article", "created": "2004-05-30", "title": "Relative Influence Of Wildfire On Soil Properties And Erosion Processes In Different Mediterranean Environments In Ne Spain", "description": "Abandonment of terraced soils and increased brushland cover has increased wildfire occurrence to almost an annual rate in the Cap de Creus Peninsula, NE Pyrenees Range, Province of Girona, Spain. A wildfire occurred in August 2000 and affected an area of 6760 ha of shrubs and cork trees, whereas still cultivated plots were only slightly affected. Five stations of erosion measurements, corresponding to five different environments (from present cultivation to late abandonment) were destroyed by the passage of fire, and were promptly replaced to allow to monitoring post-fire effects on soil erosion. Selected soil properties were determined monthly before the fire and during 6 months after the fire at a monthly rate. Runoff and sediment yield together with dissolved organic carbon (DOC) in runoff water and organic carbon losses in eroded sediments (EOC) were evaluated throughout 2000. The last stage of abandonment, stands of cork trees, had the highest soil stability. Nevertheless, evidence of unfavourable soil conditions was detected at the shrub stage, when Cistus monspeliensis cover was the dominant opportunistic plant. This stage was considered to be a critical threshold leading either to degradation or regeneration processes according to fire frequency. A drastic change in soil properties, erosion and nutrient depletion occurred after the fire in all the environments. Statistics enabled to state that environments differed significantly in main soil properties. By statistically comparing the measured variables between the environments before and after the fire, DOC was found to be the soil parameter showing the highest significance between environments. Absolute values of erosion were low with respect to other Mediterranean environments although the shallow nature of these soils might deserve special attention because of a comparatively higher risk of degradation.", "keywords": ["Analysis of Variance", "Rain", "Electric Conductivity", "04 agricultural and veterinary sciences", "Hydrogen-Ion Concentration", "15. Life on land", "Carbon", "Fires", "Soil", "Spain", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "Environmental Pollution", "Ecosystem", "Environmental Monitoring"]}, "links": [{"href": "https://doi.org/10.1016/j.scitotenv.2004.01.026"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.scitotenv.2004.01.026", "name": "item", "description": "10.1016/j.scitotenv.2004.01.026", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.scitotenv.2004.01.026"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-07-26T00:00:00Z"}}, {"id": "10.1071/sr13043", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:18:00Z", "type": "Journal Article", "created": "2013-12-20", "title": "Impact Of Carbon Farming Practices On Soil Carbon In Northern New South Wales", "description": "<p>This study sought to quantify the influence of \uffe2\uff80\uff98carbon farming\uffe2\uff80\uff99 practices on soil carbon stocks, in comparison with conventional grazing and cropping, in northern New South Wales. The study had two components: assessment of impacts of organic amendments on soil carbon and biological indicators in croplands on Vertosols of the Liverpool Plains; and assessment of the impact of grazing management on soil carbon in Chromosols of the Northern Tablelands. The organic amendment sites identified for the survey had been treated with manures, composts, or microbial treatments, while the conventional management sites had received only chemical fertilisers. The rotational grazing sites had been managed so that grazing was restricted to short periods of several days, followed by long rest periods (generally several months) governed by pasture growth. These were compared with sites that were grazed continuously. No differences in total soil carbon stock, or soil carbon fractions, were observed between sites treated with organic amendments and those treated with chemical fertiliser. There was some evidence of increased soil carbon stock under rotational compared with continuous grazing, but the difference was not statistically significant. Similarly, double-stranded DNA (dsDNA) stocks were not significantly different in either of the management contrasts, but tended to show higher values in organic treatments and rotational grazing. The enzymatic activities of \uffce\uffb2-glucosidase and leucine-aminopeptidase were significantly higher in rotational than continuous grazing but statistically similar for the cropping site treatments. Relative abundance and community structure, measured on a subset of the cropping sites, showed a higher bacteria\uffe2\uff80\uff89:\uffe2\uff80\uff89fungi ratio and provided evidence that microbial process rates were significantly higher in chemically fertilised sites than organic amendment sites, suggesting enhanced mineralisation of organic matter under conventional management. The higher enzyme activity and indication of greater efficiency of microbial populations on carbon farming sites suggests a greater potential to build soil carbon under these practices. Further research is required to investigate whether the indicative trends observed reflect real effects of management.</p>", "keywords": ["2. Zero hunger", "Land Capability and Soil Degradation", "550", "XXXXXX - Unknown", "0401 agriculture", " forestry", " and fisheries", "Carbon Sequestration Science", "04 agricultural and veterinary sciences", "15. Life on land", "Land capability and soil productivity"]}, "links": [{"href": "https://doi.org/10.1071/sr13043"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1071/sr13043", "name": "item", "description": "10.1071/sr13043", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1071/sr13043"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-01-01T00:00:00Z"}}, {"id": "10.1098/rstb.2011.0313", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:18:26Z", "type": "Journal Article", "created": "2012-03-26", "title": "The Role Of N2o Derived From Crop-Based Biofuels, And From Agriculture In General, In Earth'S Climate", "description": "<p>             In earlier work, we compared the amount of newly fixed nitrogen (N, as synthetic fertilizer and biologically fixed N) entering agricultural systems globally to the total emission of nitrous oxide (N             2             O). We obtained an N             2             O emission factor (EF) of 3\uffe2\uff80\uff935%, and applied it to biofuel production. For \uffe2\uff80\uff98first-generation\uffe2\uff80\uff99 biofuels, e.g. biodiesel from rapeseed and bioethanol from corn (maize), that require N fertilizer, N             2             O from biofuel production could cause (depending on N uptake efficiency) as much or more global warming as that avoided by replacement of fossil fuel by the biofuel. Our subsequent calculations in a follow-up paper, using published life cycle analysis (LCA) models, led to broadly similar conclusions. The N             2             O EF applies to agricultural crops in general, not just to biofuel crops, and has made possible a top-down estimate of global emissions from agriculture. Independent modelling by another group using bottom-up IPCC inventory methodology has shown good agreement at the global scale with our top-down estimate. Work by Davidson showed that the rate of accumulation of N             2             O in the atmosphere in the late nineteenth and twentieth centuries was greater than that predicted from agricultural inputs limited to fertilizer N and biologically fixed N (Davidson, E. A. 2009             Nat. Geosci             .             2             , 659\uffe2\uff80\uff93662.). However, by also including soil organic N mineralized following land-use change and NO                            x                          deposited from the atmosphere in our estimates of the reactive N entering the agricultural cycle, we have now obtained a good fit between the observed atmospheric N             2             O concentrations from 1860 to 2000 and those calculated on the basis of a 4 per cent EF for the reactive N.           </p>", "keywords": ["2. Zero hunger", "Air Pollutants", "330", "Climate", "Nitrous Oxide", "Agriculture", "15. Life on land", "Nitrification", "01 natural sciences", "7. Clean energy", "630", "Soil", "13. Climate action", "Biofuels", "Denitrification", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1098/rstb.2011.0313"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Philosophical%20Transactions%20of%20the%20Royal%20Society%20B%3A%20Biological%20Sciences", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1098/rstb.2011.0313", "name": "item", "description": "10.1098/rstb.2011.0313", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1098/rstb.2011.0313"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-05-05T00:00:00Z"}}, {"id": "10.1111/gcb.12819", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:18:40Z", "type": "Journal Article", "created": "2014-12-05", "title": "Soil Warming And Co2 Enrichment Induce Biomass Shifts In Alpine Tree Line Vegetation", "description": "Abstract<p>Responses of alpine tree line ecosystems to increasing atmospheric CO2 concentrations and global warming are poorly understood. We used an experiment at the Swiss tree line to investigate changes in vegetation biomass after 9\uffc2\uffa0years of free air CO2 enrichment (+200\uffc2\uffa0ppm; 2001\uffe2\uff80\uff932009) and 6\uffc2\uffa0years of soil warming (+4\uffc2\uffa0\uffc2\uffb0C; 2007\uffe2\uff80\uff932012). The study contained two key tree line species, Larix decidua and Pinus uncinata, both approximately 40\uffc2\uffa0years old, growing in heath vegetation dominated by dwarf shrubs. In 2012, we harvested and measured biomass of all trees (including root systems), above\uffe2\uff80\uff90ground understorey vegetation and fine roots. Overall, soil warming had clearer effects on plant biomass than CO2 enrichment, and there were no interactive effects between treatments. Total plant biomass increased in warmed plots containing Pinus but not in those with Larix. This response was driven by changes in tree mass (+50%), which contributed an average of 84% (5.7\uffc2\uffa0kg\uffc2\uffa0m\uffe2\uff88\uff922) of total plant mass. Pinus coarse root mass was especially enhanced by warming (+100%), yielding an increased root mass fraction. Elevated CO2 led to an increased relative growth rate of Larix stem basal area but no change in the final biomass of either tree species. Total understorey above\uffe2\uff80\uff90ground mass was not altered by soil warming or elevated CO2. However, Vaccinium myrtillus mass increased with both treatments, graminoid mass declined with warming, and forb and nonvascular plant (moss and lichen) mass decreased with both treatments. Fine roots showed a substantial reduction under soil warming (\uffe2\uff88\uff9240% for all roots &lt;2\uffc2\uffa0mm in diameter at 0\uffe2\uff80\uff9320\uffc2\uffa0cm soil depth) but no change with CO2 enrichment. Our findings suggest that enhanced overall productivity and shifts in biomass allocation will occur at the tree line, particularly with global warming. However, individual species and functional groups will respond differently to these environmental changes, with consequences for ecosystem structure and functioning.</p>", "keywords": ["0106 biological sciences", "2. Zero hunger", "Models", " Statistical", "Temperature", "Larix", "Carbon Dioxide", "15. Life on land", "Pinus", "Global Warming", "01 natural sciences", "Soil", "Species Specificity", "13. Climate action", "Biomass", "Tundra", "Switzerland"]}, "links": [{"href": "https://doi.org/10.1111/gcb.12819"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/gcb.12819", "name": "item", "description": "10.1111/gcb.12819", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/gcb.12819"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-01-30T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2009.02121.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:18:51Z", "type": "Journal Article", "created": "2009-12-22", "title": "Functional Changes In The Control Of Carbon Fluxes After 3 Years Of Increased Drought In A Mediterranean Evergreen Forest?", "description": "Abstract<p>Our objective was to test how a long\uffe2\uff80\uff90term increased water limitation affects structural and functional properties of a Mediterranean ecosystem, and how these changes modify the response of the main carbon fluxes to climatic controls. In 2003, a 27% throughfall exclusion experiment was installed in a Quercus ilex L. forest in France. Gross primary production (GPP), ecosystem respiration (RECO) and net ecosystem exchange (NEE) were estimated in a control and a dry treatment. Decreasing throughfall decreased GPP by 14% and had a smaller effect on RECO (\uffe2\uff88\uff9212%), especially soil respiration RS (\uffe2\uff88\uff9211%). Interannual variability of GPP (29%) was higher than for RECO (12%). Error propagation was used to estimates uncertainties in the NEE fluxes, which ranged from 3% to 10% in the control treatment but up to 167% for NEE in the dry treatment because more steps and data types were involved in the scaling. After 3 years of throughfall exclusion, we found no acclimation of RS to climatic drivers. Functional properties of the response of RS to soil water, temperature and rain pulse remained similar in the control and the dry treatments. A diurnal clockwise hysteresis in RS was probably controlled by canopy photosynthesis with a 3\uffe2\uff80\uff83h lag. The proportion of diurnal variation of respiration due to photosynthesis was similar in all treatments (4\uffe2\uff80\uff935%). Because of the characteristic of rain in Mediterranean climates, a continuous decrease of water input in these environments have an effect on topsoil water and consequently on RS only during short periods when rainfall is characterized by infrequent and small events that does not allow the topsoil to reach field capacity and does not allow to dry completely. However, in the longer term, we expect a stronger decrease in RS in the dry treatment driven by the decrease in GPP.</p>", "keywords": ["0106 biological sciences", "550", "15. Life on land", "gross primary production", "soil respiration", "01 natural sciences", "630", "6. Clean water", "Quercus ilex", "throughfall exclusion", "13. Climate action", "rain pulse", "eddy-covariance", "Q(10)", "error propagation", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2009.02121.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2009.02121.x", "name": "item", "description": "10.1111/j.1365-2486.2009.02121.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2009.02121.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-08-01T00:00:00Z"}}, {"id": "10.1111/sum.12198", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:06Z", "type": "Journal Article", "created": "2015-07-31", "title": "Long-Term Effects Of Tillage, Nutrient Application And Crop Rotation On Soil Organic Matter Quality Assessed By Nmr Spectroscopy", "description": "Abstract<p>Crop and land management practices affect both the quality and quantity of soil organic matter (SOM) and hence are driving forces for soil organic carbon (SOC) sequestration. The objective of this study was to assess the long\uffe2\uff80\uff90term effects of tillage, fertilizer application and crop rotation onSOCin an agricultural area of southern Norway, where a soil fertility and crop rotation experiment was initiated in 1953 and a second experiment on tillage practices was initiated in 1983. The first experiment comprised 6\uffe2\uff80\uff90yr crop rotations with cereals only and 2\uffe2\uff80\uff90yr cereal and 4\uffe2\uff80\uff90yr grass rotations with recommended (base) and more than the recommended (above base) fertilizer application rates; the second experiment dealt with autumn\uffe2\uff80\uff90ploughed (conventional\uffe2\uff80\uff90till) plots and direct\uffe2\uff80\uff90drilled plots (no\uffe2\uff80\uff90till). Soil samples at 0\uffe2\uff80\uff9310 and 10\uffe2\uff80\uff9330\uffc2\uffa0cm depths were collected in autumn 2009 and analysed for their C and N contents. The quality ofSOMin the top layer was determined by13C solid\uffe2\uff80\uff90stateNMRspectroscopy. TheSOCstock did not differ significantly because of rotation or fertilizer application types, even after 56\uffc2\uffa0yr. However, the no\uffe2\uff80\uff90till system showed a significantly higherSOCstock than the conventional\uffe2\uff80\uff90till system at the 0\uffe2\uff80\uff9310\uffc2\uffa0cm depth after the 26\uffc2\uffa0yr of experiment, but it was not significantly different at the 10\uffe2\uff80\uff9330\uffc2\uffa0cm depth. In terms of quality,SOMwas found to differ by tillage type, rate of fertilizer application and crop rotation. The no\uffe2\uff80\uff90till system showed an abundance of O\uffe2\uff80\uff90alkyl C, while conventional\uffe2\uff80\uff90till system indicated an apparently indirect enrichment in alkyl C, suggesting a more advanced stage ofSOMdecomposition. The long\uffe2\uff80\uff90term quantitative and qualitative effects onSOMsuggest that adopting a no\uffe2\uff80\uff90tillage system and including grass in crop rotation and farmyard manure in fertilizer application may contribute to preserve soil fertility and mitigate climate change.</p>", "keywords": ["Fertilizer application", "2. Zero hunger", "Crop rotation", " fertilizer application", " soil organic carbon (SOC)", " soil organic matter (SOM)", " tillage", " NMR spectroscopy.", "NMR spectroscopy", "Crop rotation", "Soil organic matter (SOM)", "13. Climate action", "Soil organic carbon (SOC)", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Tillage"]}, "links": [{"href": "https://doi.org/10.1111/sum.12198"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Use%20and%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/sum.12198", "name": "item", "description": "10.1111/sum.12198", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/sum.12198"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-07-31T00:00:00Z"}}, {"id": "10.15454/SVDTOU", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:37Z", "type": "Dataset", "title": "Statistiques spatio-temporelles sur les propri\u00e9t\u00e9s agronomiques des sols agricoles en France issues de la Base de Donn\u00e9es d'Analyses de Terre (BDAT)", "description": "In France, farmers commission about 250,000 soil-testing analyses per year to assist them managing soil fertility. The number and diversity of origin of the samples make these analyses an interesting and original information source regarding cultivated topsoil variability. Moreover, these analyses relate to several parameters strongly influenced by human activity (macronutrient contents, pH...), for which existing cartographic information is not very relevant. Compiling the results of these analyses into a database makes it possible to re-use these data within both a national and temporal framework. A database compilation relating to data collected over the period 1990-2014 has been recently achieved. So far, commercial soil-testing laboratories approved by the Ministry of Agriculture have provided analytical results from more than 3,600,000 samples. After the initial quality control stage, analytical results from more than 1,900,000 samples were available in the database. The anonymity of the landholders seeking soil analyses is perfectly preserved, as the only identifying information stored is the location of the nearest administrative city to the sample site. We present in this dataset a set of statistical parameters of the spatial distributions for several agronomic soil properties. These statistical parameters are calculated for 4 different nested spatial entities (administrative areas: e.g. regions, departments, counties and agricultural areas) and for 5 time periods (1990-1994, 1995-1999, 2000-2004, 2005-2009, 2010-2014). Two kinds of agronomic soil properties are available: the first one correspond to the quantitative variables like the organic carbon content, and the second one corresponds to the qualitative variables like the texture class. For each spatial unit and temporal period, we calculated the following statistics sets: the first set is calculated for the quantitative variables and corresponds to the number of samples, the mean, the standard deviation and, the 2-,4-,10-quantiles; the second set is calculated for the qualitative variables and corresponds to the number of samples, the value of the dominant class, the number of samples of the dominant class, the second dominant class, the number of samples of the second dominant class.", "keywords": ["2. Zero hunger", "Earth and Environmental Science", "Soils and soil sciences", "Earth and Environmental Sciences", "Soil Sciences", "soil texture", "15. Life on land", "soil analysis", "Environmental Research", "Natural Sciences", "Geosciences"], "contacts": [{"organization": "Saby, Nicolas P.A., Lemercier, Blandine, Arrouays, Dominique, Walter, Christian, Gouny, Laetitia, Swidersky, Chlo\u00e9, Toutain, Beno\u00eet, Bispo, Antonio,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.15454/SVDTOU"}, {"rel": "self", "type": "application/geo+json", "title": "10.15454/SVDTOU", "name": "item", "description": "10.15454/SVDTOU", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.15454/SVDTOU"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-01-01T00:00:00Z"}}, {"id": "10.1590/s0100-06832009000100016", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:43Z", "type": "Journal Article", "created": "2009-03-11", "title": "Atributos F\u00edsicos, Qu\u00edmicos E Biol\u00f3gicos De Solo De Cerrado Sob Diferentes Sistemas De Uso E Manejo", "description": "<p>\uffc3\uff80 medida que o conhecimento do sistema plantio direto se amplia, verifica-se que o uso de indicadores qu\uffc3\uffadmicos isolados n\uffc3\uffa3o permite melhor caracteriza\uffc3\uffa7\uffc3\uffa3o dos solos, sendo necess\uffc3\uffa1rio utilizar um conjunto de indicadores da qualidade do solo com a entrada de outros atributos, entre eles os f\uffc3\uffadsicos e os biol\uffc3\uffb3gicos. Objetivou-se avaliar os efeitos de sistemas de manejo e uso do solo nos atributos f\uffc3\uffadsicos, qu\uffc3\uffadmicos e biol\uffc3\uffb3gicos de um Latossolo Vermelho distr\uffc3\uffb3fico e um Neossolo Quartzar\uffc3\uffaanico \uffc3\uffb3rtico sob Cerrado, no entorno do Parque Nacional das Emas. Os aspectos avaliados no Latossolo foram: Cerrado nativo, pastagem, milheto em preparo convencional, nabo forrageiro em plantio direto e sorgo em plantio direto. No Neossolo: Cerrado nativo, pastagem nativa, integra\uffc3\uffa7\uffc3\uffa3o agricultura-pecu\uffc3\uffa1ria, pastagem cultivada, plantio direto com soja no ver\uffc3\uffa3o e plantio direto com milho no ver\uffc3\uffa3o. As amostras de solo foram coletadas na profundidade de 0 a 10 cm. O delineamento experimental foi o inteiramente casualizado, com cinco parcelas de 150 m\uffc2\uffb2, sendo coletadas 10 subamostras aleat\uffc3\uffb3rias. As an\uffc3\uffa1lises qu\uffc3\uffadmicas, f\uffc3\uffadsicas e biol\uffc3\uffb3gicas foram realizadas no Laborat\uffc3\uffb3rio de Solos da UFG/CJ. Os manejos promoveram altera\uffc3\uffa7\uffc3\uffb5es na densidade do solo, volume total de poros, macroporos e resist\uffc3\uffaancia do solo \uffc3\uffa0 penetra\uffc3\uffa7\uffc3\uffa3o no Neossolo e no Latossolo, excetuando-se neste o volume total de poros. Houve pequena varia\uffc3\uffa7\uffc3\uffa3o nos atributos qu\uffc3\uffadmicos nos dois solos, com o Cerrado apresentando maior acidez potencial e menor teor de c\uffc3\uffa1tions troc\uffc3\uffa1veis e P. Os atributos biol\uffc3\uffb3gicos do solo foram alterados pelos sistemas de manejo, sendo mais prejudicados em sistemas com maior revolvimento do solo. A an\uffc3\uffa1lise can\uffc3\uffb4nica dos dados demonstrou que os atributos f\uffc3\uffadsicos foram os de menor import\uffc3\uffa2ncia por apresentar maior coeficiente de pondera\uffc3\uffa7\uffc3\uffa3o nas vari\uffc3\uffa1veis can\uffc3\uffb4nicas. Os atributos do solo, isoladamente, pouco contribu\uffc3\uffadram para a avalia\uffc3\uffa7\uffc3\uffa3o da qualidade do solo: no entanto, quando se usou a an\uffc3\uffa1lise multivariada, subsidiaram a constata\uffc3\uffa7\uffc3\uffa3o dos manejos do solo mais sustent\uffc3\uffa1veis.</p>", "keywords": ["C fra\u00e7\u00e3o leve", "multivariate analysis", "an\u00e1lise multivariada", "plantio direto", "light carbon fraction", "0401 agriculture", " forestry", " and fisheries", "soil quality", "04 agricultural and veterinary sciences"]}, "links": [{"href": "https://doi.org/10.1590/s0100-06832009000100016"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Revista%20Brasileira%20de%20Ci%C3%AAncia%20do%20Solo", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1590/s0100-06832009000100016", "name": "item", "description": "10.1590/s0100-06832009000100016", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1590/s0100-06832009000100016"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-02-01T00:00:00Z"}}, {"id": "10.2139/ssrn.4556085", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:25Z", "type": "Journal Article", "created": "2023-08-29", "title": "A Laser Diffractometry Technique for Determining the Soil Water Stable Aggregates Index", "description": "Open AccessPeer reviewed", "keywords": ["Water stable aggregates index", "Laser diffractometry", "Wet sieving", "Soil aggregates"]}, "links": [{"href": "https://doi.org/10.2139/ssrn.4556085"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2139/ssrn.4556085", "name": "item", "description": "10.2139/ssrn.4556085", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2139/ssrn.4556085"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-01T00:00:00Z"}}, {"id": "10.22541/essoar.171865325.50703739/v1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:28Z", "type": "Journal Article", "created": "2024-06-17", "title": "Physics-Informed Neural Networks for Estimating a Continuous Form of the Soil Water Retention Curve from Basic Soil Properties", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p id='p1'>The soil water retention curve (SWRC) is essential for describing water and energy exchange processes at the interface between the solid earth and the atmosphere. Despite its importance, measuring the SWRC using standard laboratory methods is challenging and time-consuming. This paper presents a novel physics-informed neural network (PINN) approach for developing pedotransfer functions (PTFs) to predict continuous SWRCs based on soil texture, organic carbon content, and dry bulk density. In contrast to conventional parametric PTFs developed for specific SWRC models, the PINN learns a non-specific form of the SWRC by effectively integrating both measurements and physical constraints into the training process. This approach allows the estimated SWRC to maintain its physical integrity from saturation to oven-dry conditions, even in scenarios with sparse data. The new approach is particularly effective for tackling the challenges encountered in developing PTFs on large SWRC datasets, which often have an imbalance towards the wet-end and include numerous samples with limited and unevenly distributed measurements. We compared the performance of the PINN with that of a conventional physics-agnostic neural network using a dataset of 4200 soil samples. While both networks performed similarly at the wet-end where data are abundant, the PINN excelled at the dry-end where data are sparse and unevenly distributed, achieving a normalized RMSE of 0.172 compared to 0.522 for the conventional neural network. The SWRC derived from the PINN is differentiable with respect to the matric potential and can be seamlessly integrated into the governing equations of water flow in the unsaturated zone.</p></article>", "keywords": ["Environmental sciences", "physics-constrained machine learning", "physics\u2010constrained machine learning", "soil hydraulic properties", "GE1-350", "15. Life on land", "continuous pedotransfer functions"]}, "links": [{"href": "https://doi.org/10.22541/essoar.171865325.50703739/v1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Water%20Resources%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.22541/essoar.171865325.50703739/v1", "name": "item", "description": "10.22541/essoar.171865325.50703739/v1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.22541/essoar.171865325.50703739/v1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-06-17T00:00:00Z"}}, {"id": "10.23986/afsci.148486", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:33Z", "type": "Journal Article", "created": "2025-05-26", "title": "Defining critical SOC/clay thresholds for soil health in boreal croplands using satellite-based NDVI proxies for productivity and resilience", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>The European Union\u2019s soil strategy underscores the necessity for establishing feasible criteria to assess the soil health condition. In this study, we developed a method to define a critical threshold value for SOC/clay ratio on the basis of crop productivity and resilience. The study integrated data from national soil monitoring (NSM) of Finnish cropland soils (n=505) with satellite-based normalized difference vegetation index (NDVI) obtained from the EcoDataCube (EDC) portal. The study area was confined to the boreal environmental zone to ensure consistent pedo-climatic conditions. The results show that the interannual variation in crop productivity increases rapidly below SOC/clay ratio of 0.09 (95% confidence intervals ranging from 0.07 to 0.16), whereas the corresponding threshold for mean productivity was 0.13 (0.09\u20130.16). The observed threshold values were found applicable for both cereals and temporary ley. The SOC/clay ratio of 1:13 (=0.08), regarded as a criterion for healthy soil in the current Soil Monitoring Law proposal, based on studies by Johannes et al. (2017) and Prout et al. (2021), is lower than the mean thresholds estimated in this study but aligns close to the lower bound of the 95% confidence intervals. In this research, Finnish agricultural land served as the case study area, but the method is easily applicable to various pedo-climatic regions and potentially to different land use types.</p></article>", "keywords": ["S", "Soil Monitoring Law", " SOC/clay ratio", " cropland", " NDVI", " satellite data", " national soil monitoring", "Agriculture (General)", "Agriculture", "S1-972"], "contacts": [{"organization": "Heikkinen, Jaakko, Keskinen, Riikka, Ylivainio, Kari,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.23986/afsci.148486"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Food%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.23986/afsci.148486", "name": "item", "description": "10.23986/afsci.148486", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.23986/afsci.148486"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-26T00:00:00Z"}}, {"id": "10261/359343", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:31Z", "type": "Dataset", "title": "Plant affinity to extreme soils and foliar sulphur mediate species-specific responses to sheep grazing in gypsum systems [Dataset V2]", "description": "Open AccessPeer reviewed", "keywords": ["Semiarid systems", "Gypsophiles", "Elemental composition", "Gypsum soils", "Herbivory", "Functional traits"], "contacts": [{"organization": "Cera, Andreu, Montserrat-Mart\u00ed, Gabriel, Luzuriaga, Arantzazu L., Pueyo, Yolanda, Palacio, Sara,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10261/359343"}, {"rel": "self", "type": "application/geo+json", "title": "10261/359343", "name": "item", "description": "10261/359343", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10261/359343"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-01T00:00:00Z"}}, {"id": "10.3389/fmicb.2016.01446", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:44Z", "type": "Journal Article", "created": "2016-09-14", "description": "Soil management is fundamental to all agricultural systems and fertilization practices have contributed substantially to the impressive increases in food production. Despite the pivotal role of soil microorganisms in agro-ecosystems, we still have a limited understanding of the complex response of the soil microbiota to organic and mineral fertilization in the very long-term. Here, we report the effects of different fertilization regimes (mineral, organic and combined mineral and organic fertilization), carried out for more than a century, on the structure and activity of the soil microbiome. Organic matter content, nutrient concentrations, and microbial biomass carbon were significantly increased by mineral, and even more strongly by organic fertilization. Pyrosequencing revealed significant differences between the structures of bacterial and fungal soil communities associated to each fertilization regime. Organic fertilization increased bacterial diversity, and stimulated microbial groups (Firmicutes, Proteobacteria, and Zygomycota) that are known to prefer nutrient-rich environments, and that are involved in the degradation of complex organic compounds. In contrast, soils not receiving manure harbored distinct microbial communities enriched in oligotrophic organisms adapted to nutrient-limited environments, as Acidobacteria. The fertilization regime also affected the relative abundances of plant beneficial and detrimental microbial taxa, which may influence productivity and stability of the agroecosystem. As expected, the activity of microbial exoenzymes involved in carbon, nitrogen, and phosphorous mineralization were enhanced by both types of fertilization. However, in contrast to comparable studies, the highest chitinase and phosphatase activities were observed in the solely mineral fertilized soil. Interestingly, these two enzymes showed also a particular high biomass-specific activities and a strong negative relation with soil pH. As many soil parameters are known to change slowly, the particularity of unchanged fertilization treatments since 1902 allows a profound assessment of linkages between management and abiotic as well as biotic soil parameters. Our study revealed that pH and TOC were the majors, while nitrogen and phosphorous pools were minors, drivers for structure and activity of the soil microbial community. Due to the long-term treatments studied, our findings likely represent permanent and stable, rather than transient, responses of soil microbial communities to fertilization.", "keywords": ["Soil nutrients", "0301 basic medicine", "2. Zero hunger", "0303 health sciences", "long-term fertilization", "microbial biomass", "15. Life on land", "microbial activity", "Microbiology", "QR1-502", "03 medical and health sciences", "13. Climate action", "soil microbial communities", "soil nutrients", "454 pyrosequencing"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2016.01446"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2016.01446", "name": "item", "description": "10.3389/fmicb.2016.01446", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2016.01446"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-14T00:00:00Z"}}, {"id": "10.5061/dryad.pb271", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:32Z", "type": "Dataset", "title": "Data from: Interactions among roots, mycorrhizae and free-living microbial communities differentially impact soil carbon processes", "description": "unspecifiedPlant roots, their associated microbial community and free-living soil  microbes interact to regulate the movement of carbon from the soil to the  atmosphere, one of the most important and least understood fluxes of  terrestrial carbon. Our inadequate understanding of how plant\u2013microbial  interactions alter soil carbon decomposition may lead to poor model  predictions of terrestrial carbon feedbacks to the atmosphere. Roots,  mycorrhizal fungi and free-living soil microbes can alter soil carbon  decomposition through exudation of carbon into soil. Exudates of simple  carbon compounds can increase microbial activity because microbes are  typically carbon limited. When both roots and mycorrhizal fungi are  present in the soil, they may additively increase carbon decomposition.  However, when mycorrhizas are isolated from roots, they may limit soil  carbon decomposition by competing with free-living decomposers for  resources. We manipulated the access of roots and mycorrhizal fungi to  soil in situ in a temperate mixed deciduous forest. We added 13C-labelled  substrate to trace metabolized carbon in respiration and measured  carbon-degrading microbial extracellular enzyme activity and soil carbon  pools. We used our data in a mechanistic soil carbon decomposition model  to simulate and compare the effects of root and mycorrhizal fungal  presence on soil carbon dynamics over longer time periods. Contrary to  what we predicted, root and mycorrhizal biomass did not interact to  additively increase microbial activity and soil carbon degradation. The  metabolism of 13C-labelled starch was highest when root biomass was high  and mycorrhizal biomass was low. These results suggest that mycorrhizas  may negatively interact with the free-living microbial community to  influence soil carbon dynamics, a hypothesis supported by our enzyme  results. Our steady-state model simulations suggested that root presence  increased mineral-associated and particulate organic carbon pools, while  mycorrhizal fungal presence had a greater influence on particulate than  mineral-associated organic carbon pools. Synthesis. Our results suggest  that the activity of enzymes involved in organic matter decomposition was  contingent upon root\u2013mycorrhizal\u2013microbial interactions. Using our  experimental data in a decomposition simulation model, we show that  root\u2013mycorrhizal\u2013microbial interactions may have longer-term legacy  effects on soil carbon sequestration. Overall, our study suggests that  roots stimulate microbial activity in the short term, but contribute to  soil carbon storage over longer periods of time.", "keywords": ["2. Zero hunger", "roots", "13. Climate action", "simulation model", "carbon dynamics", "Rhizosphere", "stable isotope", "plant-soil (belowground) interactions", "15. Life on land", "extra-cellular enzyme activity", "mycorrhizae"], "contacts": [{"organization": "Moore, Jessica A. M., Jiang, Jiang, Patterson, Courtney M., Wang, Gangsheng, Mayes, Melanie A., Classen, Aim\u00e9e T.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.pb271"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.pb271", "name": "item", "description": "10.5061/dryad.pb271", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.pb271"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-14T00:00:00Z"}}, {"id": "10.5281/zenodo.10179987", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:55Z", "type": "Dataset", "title": "Organic soil surveys across Flanders", "description": "This dataset contains geospatial data of organic soils in wetlands and valleys across the Flemish region (Belgium). It is a compilation of several surveys, mainly commissioned by Agentschap voor Natuur en Bos (ANB), Vlaamse Milieumaatschappij (VMM) and Natuurpunt to map the presence of shallow organic soil layers for conservation purposes. Organic layer depth was mapped by pushing a (pvc) rod into the organic ground until it hits a resistance or mineral layer, then recording the depth and the geographical position with a handheld gps.\u00a0This method allows a quick and cost-effective survey of large shallow carbon stocks. At several locations additional auger boring sample data and electrical conductivity-probe sample data was included in the dataset.Since the majority of the samples were not analysed on carbon content, soils were defined as 'organic soils'.Dataset maintained by the Research Institute for Nature and Forest/INBO For any inquiries, please contact Tom.dedobbelaer@inbo.be or Cecile.herr@inbo.be. The .csv will be updated as required to correct issues or to add data from additional surveys. Please check for updated versions periodically. Data description  location: inventory location name year: year of survey Sample_ID: Point-ID given during survey, not unique Unique_ID: Unique point-ID created for this dataset EPSG_31370_X: X-coordinaat in EPSG 31370 (Lambert72), rounded to the closest meter EPSG_31370_Y: Y-coordinaat in EPSG 31370 (Lambert72), rounded to the closest meter stratigraphy: stratigraphy of the organic layer (near surface, substrate) organic_layer_notation: indicates if depth is a value or within a range organic_layer_depth: depth of the organic layer, measured from surface level (in cm) sign: certain surveys mention a sign indicating if the actual depth is equal to or bigger then the given depth (e.g. when the measuring rod is too short or damaged during a survey) method: method used to define organic layer depth source: indicates the source of the data, it can be original field data or derived data from a map. comment_soil: field comment given during survey (in Dutch) contractor: contractor of the survey awarding authority: commissioner of the survey", "keywords": ["carbon stock", "Flanders", "peatland", "15. Life on land", "6. Clean water", "organic soil", "wetlands"], "contacts": [{"organization": "De Dobbelaer, Tom, Herr, C\u00e9cile, De Becker, Piet, Van Ballaer, Siege,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.10179987"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.10179987", "name": "item", "description": "10.5281/zenodo.10179987", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.10179987"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-21T00:00:00Z"}}, {"id": "10.5281/zenodo.10959077", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:22:08Z", "type": "Dataset", "created": "2023-10-30", "title": "Knowledge gaps on trade-offs of soil carbon sequestration related to soil management strategies", "description": "The database contains 87 unique literature items (29 reviews, 42 meta-analyses, 16 original papers) describing the effect of a soil management strategy (tillage management, cropping systems, water management, cover crops, crop residues, livestock manure, slurry, compost, biochar, liming) on the trade-offs between soil carbon sequestration or SOC change and N2O emission, CH4 emission and nitrogen leaching. Since some literature items describe effects of several SMS categories, the database_summary tab comprises a total of 112 unique inputs. For each input it is indicated in the Database_summary tab if it was used as input for the 'Soil management effect assessment' in Maenhout et al. (2024) [Maenhout, P., Di Bene, C., Cayuela, M. L., Diaz-Pines, E., Govednik, A., Keuper, F., Mavsar, S., Mihelic, R., O'Toole, A., Schwarzmann, A., Suhadolc, M., Syp, A., & Valkama, E. (2024). Trade-offs and synergies of soil carbon sequestration: Addressing knowledge gaps related to soil management strategies. European Journal of Soil Science, 75(3), e13515. https://doi.org/10.1111/ejss.13515] and/or to define knowledge gaps ('Knowledge gap in tab'-column). Knowledge gaps and research recommendations are gouped per soil management strategy in different tabs in this database. Per soil management strategy, knowledge gaps are clustered per theme in groups. These themes include: the specific soil management strategy, pedoclimatic conditions, establishment of experiments, other soil management strategies, meta-analysis, modelling and other", "keywords": ["Water management", "EJP SOIL", "Climate change mitigation", "Nitrogen leaching", "CH4", "Conservation agriculture", "Cropping systems", "SOMMIT", "N2O", "Organic matter inputs", "Tillage"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.10959077"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.10959077", "name": "item", "description": "10.5281/zenodo.10959077", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.10959077"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-05-13T00:00:00Z"}}, {"id": "10.5281/zenodo.13952097", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:22:22Z", "type": "Dataset", "created": "2024-01-01", "title": "SERENA EJPSoil Soil erosion control in Tuscany (Italy)", "description": "Open AccessThe internal EJP SOIL project SERENA contributed to the evaluation of soil multifunctionality aiming at providing assessment tools for land planning and soil policies at different scales. By co-working with relevant stakeholders, the project provided co-developed indicators and associated cookbooks to assess and map them, to report both on soil degradation, soil-based ecosystem services and their bundles, under actual conditions and for climate and land-use changes, at the regional, national, and European scales.  One of the\u00a0objective of SERENA project was to develop methods to calculate and map soil-based ecosystem services and soil threats. The present data was prepared according to the methodology of the SERENA Soil erosion and soil erosion control cookbook.\u00a0 Soil loss was used as an indicator for soil erosion (ST). The map of soil mass not eroded was based on the RUSLE model. Soil erosion control was calculated as the difference between potential and actual soil erosion (SES, ecosystem service of soil erosion protection, i.e. soil eroded mass retained by vegetation, Mg/ha/y). For Italy, the cookbook was applied in the Tuscany region. \u00a0     To create the soil loss map we used:\u00a0       for R-factor, not freely available database of meteorological parameters spatialized at 250 m (minimum and maximum daily air temperature; cumulate daily precipitation) over Tuscany region (period 1990\u20132022, Lamma Consortium)\u00a0 and a local linear equation between R and mean annual precipitation (P);   for C -factor, Regional Land use map 1:10.000 (2018, freely available at:\u00a0https://www502.regione.toscana.it/geoscopio/usocoperturasuolo.html) and ESDAC method (https://doi.org/10.1016/j.landusepol.2015.05.021) ; \u00a0  for K-factor, sand, silt, clay, and O.C. (%) maps (built from 4.000 soil profiles, following FAO\u2019s methodology in GSP-GSOC map, Lamma Consortium), and Torri et al. (1997) function;   for LS-factor, DEM 10 m of Tuscany, (freely available at\u00a0https://www502.regione.toscana.it/geoscopio/cartoteca.html99) and Desmet & Govers (1996) SAGA tool (applied at 10 m and upscaled);   for P-factor, not freely available database 1:10.00 of terraced areas (Lamma Consortium, 2020) (for terraced areas a multiplication factor of\u00a0 0.5\u00a0 was considered, based on expert evaluation)   for P-factor, not freely available database 1:10.00 of terraced areas (Lamma Consortium, 2020) (for terraced areas a multiplication factor\u00a0of\u00a0 0.5\u00a0 was considered, based on expert evaluation)\u00a0      Maps was delivered in the GeoTIFF format in the resolution of 100m. \u00a0     Delivered data will be validated by stakeholders from Italy (scientist) in October, 2024.", "keywords": ["Italy", "Tuscany", "SERENA project", "Soil-based ecosystem service", "RUSLE", "soil erosion control", "Grant n. 862695", "EJP-Soil"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.13952097"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.13952097", "name": "item", "description": "10.5281/zenodo.13952097", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.13952097"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-10-18T00:00:00Z"}}, {"id": "10.5281/zenodo.14044657", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:22:27Z", "type": "Dataset", "title": "SERENA EJPSOIL BE Flanders soil sealing cookbook", "description": "Open AccessThe internal EJP SOIL project SERENA contributed to the evaluation of soil multifunctionality aiming at providing assessment tools for land planning and soil policies at different scales. By co-working with relevant stakeholders, the project provided co-developed indicators and associated cookbooks to assess and map them, to report both on soil degradation, soil-based ecosystem services and their bundles, under actual conditions and for climate and land-use changes, at the regional, national and European scales.The data was prepared according to the Level 2 methodology of the SERENA soil sealing cookbook. For Belgium, the application was carried out at the regional scale for the Flanders region. \u00a0The automatically generated yearly soil sealing maps (1 m resolution GeoTIFF rasters)\u00a0combine \u201cknown\u201d sealing from administrative databases (buildings and transport infrastructure) with modelled sealing based on artificial intelligence. Administrative databases do not (adequately) cover parking lots, private driveways and garden terraces, which are a substantial part of the sealed area in Flanders. Hence, a machine learning model was built for deriving this remaining sealing from aerial imagery. For this purpose, an assessor manually labeled the sealed parts on a subset of the images. Based on this training set, a convolutional neural network model was used to produce a sealing probability map, which was converted to a binary modelled sealing map. Finally, a continuity correction was applied to ensure a temporally consistent result across the yearly maps. \u00a0The objective of the SERENA project was to develop methods to calculate and map soil-based ecosystem services and soil threats. The selected indicator was the degree of soil sealing. By evaluating this degree at two moments in time, the change in soil sealing can be determined. \u00a0\u00a0The following data were used:\u00a0         Large-scale Reference Database (Grootschalig Referentiebestand or Basiskaart), the digital topographic reference map for Flanders (vector)\u00a0           Medium-scale annual winter aerial images of Flanders (15 or 25 cm raster resolution)    This dataset is originally hosted at Geopunt (www.geopunt.be). For the most up-to-date version of the dataset, please access the data from the Geopunt repository.", "keywords": ["soil sealing", "remote sensing", "BELGIUM (FLANDERS)", "aerial images", "SERENA", "EJP-Soil", "photointerpretation"], "contacts": [{"organization": "Cockx, Kasper, Oorts, Katrien,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.14044657"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.14044657", "name": "item", "description": "10.5281/zenodo.14044657", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.14044657"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-10-30T00:00:00Z"}}, {"id": "10.5281/zenodo.14285685", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:22:34Z", "type": "Dataset", "title": "Soil Health Index and Soil Function maps for Latin America and the Caribbean", "description": "Description:This repository contains 90-meter resolution raster maps generated as part of the study titled \u201cSoil Health in Latin America and the Caribbean\u201d. These datasets provide geospatial information on soil health and its five primary functions across the Latin America and Caribbean (LAC) region. The data aim to support research, policy-making, and land management practices by offering insights into soil health conditions and functionality at a continental scale.  Data Included:      Soil Health Index (SHI):\u00a0      LAC_SHI: Comprehensive index integrating physical, chemical, and biological soil attributes to assess soil health across LAC (Size 3.19 Gb).       Soil Functions (f):      LAC_fi: Storage and regulation of nutrient fluxes and availability (Size 2.12 Gb).     LAC_fii: Regulation of water fluxes, storage, and availability (Size 2.59 Gb).     LAC_fiii: Soil organic carbon sequestration and biodiversity support (Size 1.94 Gb).     LAC_fiv: Physical support for plant growth (Size 2.48 Gb).     LAC_fv: Resistance to erosion and degradation (Size 2.42 Gb).      Format:      Raster maps in GeoTIFF format (*.tif).     Spatial resolution: 90 meters.     Coordinate reference system: EPSG:4326 (WGS 84).     Scale factor: 0.01    Use and applications:      Environmental research and modeling.     Policy development for soil conservation and sustainable land management.     Educational purposes in soil science and geospatial studies.    Visualization and other sources:Additionally, the Soil Health Index (SHI) and soil functions (SF) maps can be visualized via the Earth Engine application at https://geocis.users.earthengine.app/view/lac-soil-health and downloaded from https://geocis.users.earthengine.app/view/lac-soil-health-download. For more information, access it on the GeoCiS website, available at https://esalqgeocis.wixsite.com/english/thematic-products.  Acknowledgments:We thank the S\u00e3o Paulo Research Foundation (FAPESP, process 2014/22262-0; 2021/05129-8), the Center for Carbon Research in Tropical Agriculture (CCARBON/USP, process 2021/10573-4) and the Geotechnologies in Soil Science research group (GeoCiS, https://esalqgeocis.wixsite.com/english) for supporting this work.", "keywords": ["Soil sciences", "Machine learning", "Geotechnology", "Remote sensing", "Soil quality", "Environmental Policy"], "contacts": [{"organization": "Poppiel, Ra\u00fal Roberto, Cherubin, Maur\u00edcio Roberto, Novais, Jean Jesus Macedo, Dematte, Jose A. M.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.14285685"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.14285685", "name": "item", "description": "10.5281/zenodo.14285685", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.14285685"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-12-22T00:00:00Z"}}, {"id": "10.5281/zenodo.14812135", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:22:40Z", "type": "Other", "title": "Deliverable D2.3 - Supplementary material : 3D simulations of PFAS transport in the soil-groundwater continuum", "description": "This model is part of the toolbox built within the framework of the PROMISCES project (Deliverable D2.3).    A model train combining 1D-Hydrus, MODFLOW and MTD3MS software has been developed/updated to simulate water flow and PFAS transport in the soil groundwater continuum. The model train allowed to couple one or several vertical 1D models (1D-Hydrus) to simulate water flow and reactive solute transport in unsaturated zone with a 3D groundwater flow and transport models (MODFLOW and MT3DMS). The basic framework for numerical coupling is the information exchange between software.\u00a0     The model train is started by first running a stand-alone executable coupling 1D-Hydrus and MODFLOW (HYDMOD_OWHM.exe). It calculates water flow in the unsaturated and saturated zones. 1D-Hydrus model provides water fluxes from the bottom of the unsaturated zone as input values for recharge at the top of the MODFLOW model at appropriate time steps. In turn, water table depth is updated in the 1D-Hydrus model based on the outputs of the simulated hydraulic head using MODFLOW model. The coupling scheme developped by Beegum et al. (2018) has been used. The same input files as those required for MODFLOW and 1D-Hydrus are needed. \u00a0     Then, solute transport is calculated by exchanging information between the 1D-Hydrus-MODFLOW model train and MT3DMS (mt3dms5.3.exe). The 1D-Hydrus-MODFLOW model train simulated water flow and PFAS concentration at the bottom of the unsaturated zone. These outputs are then provided as input soluted fluxes at the top of the the MT3DMS model at each time step. A dedicated tool called Process 1D-Hydrus-MODFLOW to MT3DMS (postproces_hydrus_modflow2mt3dms.exe) has been developed to process time series of water fluxes and PFAS concentrations calculated by the 1D-Hydrus-MODFLOW model train at the bottom of the unsaturated zone to input files for MT3DMS model to simulate PFAS transport in the saturated zone. The source code, written in Fortran, an executable, documentation and an example are available at: https://github.com/JohanValstar/Process-1D-HYDRUS-MODFLOW-to-MT3DMS or https://zenodo.org/records/14929813. \u00a0     The three executables needed to run the model train are provided in the present repository. The associated input files describe a theoretical example simulating long-term non-reactive tracer migration in an unsaturated-saturated continuum considering transient boundary conditions. The features of the model including geometry of the simulated domain, the meshing, the boundary conditions and their change with time, the values of the input parameters describing the hydrodynamic and transport properties in the unsaturated and saturated zones are identical to the ones mentionned in the modelling work explained in the Chapter 3.1. of the Deliverable D2.4 of the PROMISCES project.", "keywords": ["Soil", "PFAS", "Groundwater", "Model"], "contacts": [{"organization": "Devau, Nicolas, Valstar, Johan,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.14812135"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.14812135", "name": "item", "description": "10.5281/zenodo.14812135", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.14812135"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-02-05T00:00:00Z"}}, {"id": "10.5281/zenodo.14845589", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:22:40Z", "type": "Dataset", "title": "Data from: Comparison and evaluation of sampling and eDNA metabarcoding protocols to assess soil biodiversity in Belgian LUCAS Biopoints", "description": "Environmental DNA (eDNA) metabarcoding is emerging as a novel tool for monitoring soil biodiversity. Soil biodiversity, critical for soil health and ecosystem services, is currently under-monitored due to the lack of standardized and efficient methods. We assessed whether refinements to sampling and molecular protocols could improve soil biodiversity detection and monitoring.\u00a0Comparing the 2018 LUCAS soil biodiversity protocols with newly developed national methods, we tested sampling topsoil (0-10 cm) versus deeper layers, larger soil sample sizes for DNA-extraction, taking more subsamples for composite soil samples, and alternative primer sets across 9 Belgian Biopoints included in the LUCAS 2022 survey. The results suggest that significantly more species can be detected in upper soil layers, including the forest floor, while the diversity of taxa and eDNA in the 10\u201330 cm soil layer is insufficient for annelids and arthropods to serve as indicators of ecological change. Additionally, comparison of the universal eukaryotic primers (18S) with primer sets tailored to soil mesofauna and macrofauna, showed that universal 18S primers provide limited resolution for Collembola and Annelida. Overall, the analyses suggest that vertical soil stratification (with two sampling depths) has a greater influence on the captured diversity of soil mesofauna and macrofauna than the number of subsamples, and that the highest diversity is recovered when surface sampling (0\u201310 cm topsoil and forest floor) is combined with a greater number of subsamples and a larger sampled area. With refinement and standardization, eDNA metabarcoding, combined with optimized sampling protocols, could become a powerful and efficient tool for monitoring soil biodiversity in European soils.  Description of the files  This dataset includes interactive Krona taxonomy charts to visually summarize the diversity and relative read abundance of detected taxa across sampling locations and protocols. Each ring in the chart represents a taxonomic level, with the relative width of segments reflecting the proportion of reads assigned to specific taxa at that level. These charts enable exploration of taxonomic composition and allow for comparisons between the different sampled locations, sampling protocols tested, and primer sets tested. All krona charts were made in R using psadd::plot_krona. To correct for uneven sequencing depth per sample, datasets were rarefied using a random subsampling method to 27913, 31655, 1856, 19728, and 19632 reads for Annelida (Olig01), Collembola (Coll01), Fungi (ITS9mun/ITS4ngsUni), protists (18S), and Archaea (SSU1ArF/SSU1000ArR) respectively. Fauna datasets that are subsets of the total data recovered by a primer set designed to target many different phyla (e.g. 18S) were not rarefied prior to generating the krona plots.      ejp_soil_annelida_olig01_27913.html contains the interactive taxonomy charts for Annelida. The data was generated using the group-specific Olig01 primer set and rarefied to 27,913 reads per sample.     ejp_soil_collembola_coll01_31655.html contains the interactive taxonomy charts for Collembola. The data was generated using the group-specific Coll01 primer set and rarefied to 31,655 reads per sample.     ejp_soil_arthropoda_inse01.html contains the interactive taxonomy charts for Arthropoda (Insecta, Arachnida, Chilopoda, Diplura, and Malacostraca). The data was generated using the Inse01 primer set.     ejp_soil_fungi_its9mun_its4ngsuni_1856.html contains the interactive taxonomy charts for Fungi. The data was generated using the ITS9mun and ITS4ngsUni primer set and rarefied to 1,856 reads per sample.     ejp_soil_protists_18s_19728.html contains the interactive taxonomy charts for protists. The data was generated using the eukaryotic 18S primer set and rarefied to 19,728 reads per sample.     ejp_soil_archaea_ssu1arf_ssu1000arr_19632.html contains the interactive taxonomy charts for Archaea. The data was generated using the SSU1ArF and SSU1000ArR primer set and rarefied to 19,632 reads per sample.     ejp_soil_annelida_18s.html contains the interactive taxonomy charts for Annelida. The data was generated using the eukaryotic 18S primer set.     ejp_soil_collembola_18s.html contains the interactive taxonomy charts for Collembola. The data was generated using the eukaryotic 18S primer set.     ejp_soil_arthropoda_18s.html contains the interactive taxonomy charts for Arthropoda. The data was generated using the eukaryotic 18S primer set.     ejp_soil_metadata.csv contains metadata for the samples in this study. It includes information about the sampling locations, the sampling protocols used, the sampling depth (cm), land use type, EUNIS habitat classification, and the LUCAS-ID for each sample.", "keywords": ["soil monitoring", "metabarcoding", "LUCAS", "soil biodiversity", "eDNA"], "contacts": [{"organization": "Lambrechts, Sam, Deflem, Io Sarah, Sensalari, Cecilia, De Backer, Silke, De Beer, Berdien, Neyrinck, Sabrina, De Vos, Bruno,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.14845589"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.14845589", "name": "item", "description": "10.5281/zenodo.14845589", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.14845589"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-02-10T00:00:00Z"}}, {"id": "10.5281/zenodo.14936177", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:22:43Z", "type": "Dataset", "title": "Precision Liming Soil Datasets (LimeSoDa) Zenodo Repository", "description": "Overview  Precision Liming Soil Datasets (LimeSoDa) is a collection of 31 datasets from a field- and farm-scale soil mapping context. These datasets are 'ready-to-use' for modeling purposes, as they include target soil properties and features in a tidy tabular format. Three target soil properties are present in every dataset: (1) soil organic matter (SOM) or soil organic carbon (SOC), (2) pH, and (3) clay content, while the features for modeling are dataset-specific. The primary goal of `LimeSoDa` is to enable more reliable benchmarking of machine learning methods in digital soil mapping and pedometrics. All the associated materials and data from LimeSoDa can be downloaded in this data repository. However, for a more in-depth analysis, we refer to the published paper 'LimeSoDa: A Dataset Collection for Benchmarking of Machine Learning Regressors in Digital Soil Mapping' by Schmidinger et al. (2025). You may also use our R\u00a0and Python package likewise called LimeSoDa.  \u00a0  Citation  Upon usage of datasets from LimeSoDa, please cite our associated paper:  Schmidinger, J., Vogel, S., Barkov, V., Pham, A.-D., Gebbers, R., Tavakoli, H., Correa, J., Tavares, T.R., Filippi, P., Jones, E. J., Lukas, V., Boenecke, E., Ruehlmann, J., Schroeter, I., Kramer, E., Paetzold, S., Kodaira, M., Wadoux, A.M.J.-C., Bragazza, L., Metzger, K., Huang, J., Valente, D.S.M., Safanelli, J.L., Bottega, E.L., Dalmolin, R.S.D., Farkas, C., Steiger, A., Horst, T. Z., Ramirez-Lopez, L., Scholten, T., Stumpf, F., Rosso, P., Costa, M.M., Zandonadi, R.S., Wetterlind, J. & Atzmueller, M. (2025). LimeSoDa: A Dataset Collection for Benchmarking of Machine Learning Regressors in Digital Soil Mapping.", "keywords": ["Environmental sciences", "Soil Organic Carbon", "Pedometrics", "pH", "Soil Organic Matter", "Clay", "Remote sensing", "Digital Soil Mapping"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.14936177"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.14936177", "name": "item", "description": "10.5281/zenodo.14936177", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.14936177"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-01T00:00:00Z"}}, {"id": "10.5281/zenodo.15096788", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:22:46Z", "type": "Dataset", "title": "HWSD2_Climate_and_Socioeconomic_agriculturalsoil_dataset_mainland_portugal", "description": "The study uses the Harmonized World Soil Database (HWSD v2.0) developed by FAO and IIASA for biophysical models and agroecological queries. This database consolidates information from various sources, including the European Soil Database, the 1:1 million soil map of China, and national soil maps from Afghanistan, Ghana, and T\u00fcrkiye. It has a spatial resolution of around 1 km and is revised in 2013 and 2023. HWSD v2.0 includes detailed information on soil mapping units, general soil unit information, and specific physical and chemical soil unit characteristics across seven depth layers.  The database fields cover a wide range of attributes, such as soil texture, bulk density, organic carbon content, pH, and cation exchange capacity. The harmonization process ensures that data from different sources is standardized and integrated, providing a consistent and reliable dataset for various applications. However, the HWSD v2.0 has some limitations, such as combining soil inventories gathered at different times, scales, and precision, which may affect its reliability for national studies. It is recommended to use national-level harmonized soil databases for more accurate results in specific regions.  For Portugal's mainland, the data presented in the HWSD v2.0 dataset is sourced from the European Soil Data Centre (ESDAC), which contains various metrics of chemical and physical soil properties. Out of the 2882 Portuguese parishes, only 22 are left out, representing 0.76% percent of the total number of parishes.  The study uses several datasets to analyze land use and occupation in Portugal. The Land Use and Occupation Map (COS2007v3.0) is a detailed thematic map of land use and occupation for mainland Portugal, developed by the Directorate-General for Territory (DGT). The data is organized hierarchically and includes 83 classes of land use and occupation. The CHELSA database, maintained by the Swiss Federal Institute for Forest, Snow, and Landscape Research (WSL), provides bioclimatic indexes for precipitation and average temperature over various temporal intervals and variables.  The National Institute of Statistics (INE) provides data on agricultural machinery distribution across different geographical locations. The dataset covers the total number of agricultural machines, as well as specific categories such as wheeled and tracked tractors, motor cultivators, power hoes, motor mowers, and combine harvesters. The dataset also examines the distribution of farms with access to irrigation based on geographical location.  The burned land data from 1975 to 2023 provides a comprehensive overview of fire occurrences and their impact over time. This data is crucial for understanding long-term patterns, assessing the effectiveness of fire prevention measures, and informing future land management and policy decisions.  Lastly, the population density dataset from the 2021 Census and the 2011 Census provides a decennial comparison of total population density across different geographical regions. These data are essential for understanding the evolution of land use and occupation in Portugal and their implications for environmental and agricultural consequences.", "keywords": ["Soil", "Total organic carbon", "Land use", "Soil use", "Atmospheric precipitation", "Soil type", "Organic carbon", "Land surface temperature"], "contacts": [{"organization": "Almeida Santos, R. G. F.", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15096788"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15096788", "name": "item", "description": "10.5281/zenodo.15096788", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15096788"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-03-27T00:00:00Z"}}, {"id": "10.5281/zenodo.15328215", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:22:51Z", "type": "Dataset", "title": "1000 Soils Pilot Dataset, version 8, May 2025", "description": "This record hosts data generated by the 1000 Soils Pilot. Data will be updated as more become available. Please see the most recent data upload for current data.  A beta visualization tool is available for some data types at\u00a0https://shinyproxy.emsl.pnnl.gov/app/1000soils. Please submit any suggestions or comments through the 'contact' tab. We are actively working to improve visualizations and value all feedback.  Data completed include:    Geochemistry, texture, respiration, and enzyme activities  FTICR-MS organic matter chemistry  Microbial biomass C and N  TOC/TDN of water-extractable OM  X-ray computed tomography (derived metrics available here, raw data available upon request)  Metagenomes; a variety of data formats are available upon request  Soil hydraulic properties   Data in progress:    LC-MS/MS in development, timeline TBD, inquire for status   1000S_processed_BGC_summary.csv contains all available biogeochemical data; microbial biomass C and N; and TOC/TDN of water-extractable OM; and\u00a0  1000S_Tomography.xslx contains a summary of data generated via X-ray computed tomography.  icr_v2_corems2.csv contains FTICR-MS data processed by CoreMS version 2. These data are merged by formula across instrument runs to enable cross-sample comparisons. Technical replicates are merged by retaining peaks present in 2 out of 3 replicates.  1000Soils_Metadata_Site_Mastersheet_v1.csv contains site information.  Soil Hydraulics_corrected_02042025.xlsx contains soil hydraulics information.  Readme File_v4.xlsx is the readme file.  Please contact the MONet project (monet.emsl@pnnl.gov) or Emily Graham (emily.graham@pnnl.gov) with questions.  The following file and all raw data are\u00a0available upon request:  icr_by_mass_for_single_sample_analysis_only.csv\u00a0contains FTICR-MS data processed by CoreMS and is intended for usage in the calculation of biochemical transformations within samples only. These data are not acceptable for cross-sample comparison of masses because they are from multiple instrument runs.  For more information, please see: https://www.emsl.pnnl.gov/monet and https://sc-data.emsl.pnnl.gov/monet  Acknowledgment:\u00a0  Soil data were provided by the Molecular Observation Network (MONet) at the Environmental Molecular Sciences Laboratory (https://ror.org/04rc0xn13), a DOE Office of Science user facility sponsored by the Biological and Environmental Research program under Contract No. DE-AC05-76RL01830. The work (proposal: 10.46936/10.25585/60008970) conducted by the U.S. Department of Energy, Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science user facility, is supported by the Office of Science of the U.S. Department of Energy operated under Contract No. DE-AC02-05CH11231.\u00a0  The Molecular Observation Network (MONet) database is an open, FAIR, and publicly available compilation of the molecular and microstructural properties of soil. Data in the MONet open science database can be found at\u00a0https://sc-data.emsl.pnnl.gov/.", "keywords": ["2. Zero hunger", "decomposition", "13. Climate action", "FTICR-MS", "biogeochemistry", "carbon", "molecular", "15. Life on land", "6. Clean water", "soil"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15328215"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15328215", "name": "item", "description": "10.5281/zenodo.15328215", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15328215"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-02T00:00:00Z"}}, {"id": "10.5281/zenodo.15772619", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:22:59Z", "type": "Dataset", "title": "Dataset to: Foundation for an Austrian NIR Soil Spectral Library for Soil Health Assessments", "description": "Dataset description  This is the corresponding dataset to the publication 'Foundation for an Austrian NIR Soil Spectral Library for Soil Health Assessments' by Fohrafellner et al. (2025). In this publication, we created the first Near-Infrared (NIR) Austrian Soil Spectral Library (ASSL, 680 \u2013 2500 nm) using 2,129 legacy samples from all environmental zones of Austria. Additionally, we utilized partial least squares regression modeling to evaluate the dataset's current effectiveness for soil health assessments. The dataset contains three tabs, 'Document meta data', 'Legend' and 'Dataset'. Tab 'Document meta data' gives information on the authors, the data collection time frame, terms of use, etc. In 'Legend', each column of the 'Dataset' is described. The 'Dataset' contains information on the legacy soil samples including:\u00a0    meta data (e.g. sample number, sampling year, zip code, environmental zone, land use),   soil properties (soil organic carbon [SOC], SOC to clay ratio, total carbon, labile carbon, CaCO3, total nitrogen, plant available phosphorus, pH measured in CaCl2 and acetate, cation exchange capacity, texture [sand, silt, clay content], and clay content measured by density in suspension), and  measured NIR soil spectra, also for the standards.   Project description  This Austrian Soil Spectral Library was built within the ProbeField project (November 2021 \u2013 January 2025), which was part of the European Joint Program for SOIL \u2018Towards climate-smart sustainable management of agricultural soils\u2019 (EJP SOIL) funded by the European Union Horizon 2020 research and innovation programme (Grant Agreement N\u00b0 862695). The project aimed to create a protocol detailing procedures and methodologies for accurately estimating fertility-related properties in agricultural soils in the field. Additionally, the potential for extending this data to two- and three-dimensional mapping using co-variates was demonstrated. ProbeField further collected field spectra that closely match laboratory spectra, enabling the prediction of soil properties using models calibrated with soil spectral libraries.  References  Fohrafellner, J., Lippl, M., Bajraktarevic, A., Baumgarten, A., Spiegel, H., K\u00f6rner, R. and Sand\u00e9n, T.: Foundation for an Austrian NIR Soil Spectral Library for Soil Health Assessments, 2025, in review.", "keywords": ["EJP SOIL", "ProbeField", "Spectroscopy", " Near-Infrared", "data"], "contacts": [{"organization": "Fohrafellner, Julia", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15772619"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15772619", "name": "item", "description": "10.5281/zenodo.15772619", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15772619"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-07T00:00:00Z"}}, {"id": "10.5281/zenodo.15797289", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:23:00Z", "type": "Dataset", "title": "Database of soil characteristics under specific pesticide management", "description": "Database of soil characteristics under specific pesticide management  Contributors: Mark\u00e9ta Mayerov\u00e1 and Veronika \u0158ez\u00e1\u010dov\u00e1  Affiliation: Czech Agrifood Research Center, Drnovsk\u00e1 507/73, CZ-160 00 Prague 6, Czech Republic  Database of soil characteristics will contribute to the realization of the project\u00b4s goal to identify appropriate and inappropriate pesticides from the point of the view of their impact on the non-target organisms and soil characteristics.  Field I.  The field experiment was established in 2024 in the experimental area of the Czech Agrifood Research Center in Prague \u2013 Ruzyn\u011b (previously Crop Research Institute). The experiment took place at the site of the experiment that had been running there since 2013 and included 5 different herbicide treatments in 4 replications (Mayerov\u00e1 et al. 2018)  The new trial area was split into 20 randomised plots with 2 different herbicide treatments in 8 replications and control without herbicides in 4 replications. Herbicide treatments differed in the mode of action (Table 1)  Table 1. Summary of the herbicides and active ingredients used in the trial. Classification Group by Herbicide Resistance Action Committee (HRAC).       herbicide     dose    formulation    active ingredient    content of a.i.    HRAC group    target weeds      Agritox 50 SL    1.5 l/ha    EC    MCPA    500 g/l    O    dicot      Glean 75 PX    15 g/ha    WG    chlorsulfuron    750 g/l    B    dicot + annual grasses       \u00a0  The area of each plot was 100 m2 and the 10 by 10 m plots were separated from field boundaries and from each other by 2 m on all sides to eliminate interaction between plots. Herbicides were applied post emergency in spring (April 26, 2024) from the tillering crop stage to the beginning of stem elongation (BBCH 21\u201331) by the Agrio-Napa 12 sprayer. Winter wheat was grown in the experimental field in 2024. At the beginning of March, it was mineral fertilized with LAD (ammonium nitrate with dolomite - NH4NO3\u00a0+\u00a0CaMg (CO3)2; 27 % N) at a dose 100 kg/ha.   Mixed disturbed soil samples for microbiological and physicochemical analyses were taken from the 0-15cm upper soil layer in each replication before herbicide application (April 24, 2024), 14 days after herbicide application (May 9, 2024) and 7 weeks after herbicide application (June 14, 2024). \u00a0A total of 20 soil samples were collected at each sampling. The soil samples were subsequently dried and sieved through a 2 mm sieve, thus simultaneously homogenised. The following soil properties were determined: pH (H2O), electric conductivity, available P and K, concentration NH4 and NO3, soil organic carbon, and total organic nitrogen content. Available P and K were assessed according to the Mehlich III method (Mehlich, 1984) on an Agilant ICP-OES 5110 VDV instrument. NO3 and NH4 were determined using calcium chloride solution as extractant according to ISO 14255:1998 on automated chemistry analyser SKALAR. Soil organic carbon and soil organic matter content were determined by sulfochromic oxidation according to ISO 14235:1998.   Field II  The field experiment was established in 2024 in the experimental area of the Czech Agrifood Research Center in Prague \u2013 Ruzyn\u011b (previously Crop Research Institute). The total area of the experiment is about 11 ha including the protective area around the entire experiment. The experimental area is divided into two halves, 120m wide and 300m long.\u00a0 One half was treated on June 17, 2024, with insecticide Decis forte (active ingredient deltamethrin) at a dose 62.5ml/ha, the other half was without insecticide treatment. Both areas are further divided into other halves. One half was treated on May 15, 2024, with herbicide Agritox (active ingredient MCPA) at a dose 1.5l/ha, the other was treated with hoeing only. We thus obtained 4 strips 60m wide with following treatment combinations: (A) herbicide + insecticide; (B) hoeing + insecticide; (C) hoeing; (D) herbicide. Spring wheat was grown in the experimental field in 2024. It was fertilized with mineral nitrogen at a dose of 150 kg N/ha before sowing and with 39 kg N/ha (DAM 390 - ammonium nitrate with urea) in the tillering phenophase.  In the middle of each strip (i.e. treatment), 8 sampling sites were marked in a row, 20 m apart from each other. Mixed disturbed soil samples for microbiological and physicochemical analyses were taken from the 0-15cm upper soil layer at each sampling site 14 days after herbicide application and 14 days after insecticide application. A total of 32 soil samples were collected at each sampling. Further sample processing was the same as for Field I.  The database will be gradually supplemented in the following years.   Funding: Development for this work is funded primarily by the Technology Agency of the Czech Republic, project SS07020100: \u201cThe impact of plant protection products on non-target biodiversity: soil microorganisms, invertebrates and wild plants\u201d, and the Ministry of Agriculture of the Czech Republic, institutional support MZE-RO0425.  The database was approved on September 2, 2025, by the Ministry of Agriculture of the Czech Republic.  References:  Mayerov\u00e1 M., Mikulka J., Soukup J. (2018): Effects of selective herbicide treatment on weed community in cereal crop rotation. Plant Soil Environ., 64: 413\u2013420. https://doi.org/10.17221/289/2018-PSE  \u00a0Mehlich A. (1984): Mehlich 3 Soil Test Extractant. A Modification of the Mehlich 2 Extractant. Commun. Soil Sci. Plant Anal. 15, 1409-1416. http://dx.doi.org/10.1080/00103628409367568.", "keywords": ["field trial", " herbicides", " insecticides", " soil properties"], "contacts": [{"organization": "Mayerov\u00e1, Mark\u00e9ta, \u0158ez\u00e1\u010dov\u00e1, Veronika,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.15797289"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.15797289", "name": "item", "description": "10.5281/zenodo.15797289", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.15797289"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-03T00:00:00Z"}}, {"id": "10.5281/zenodo.16017208", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:23:01Z", "type": "Dataset", "title": "Cashew orchard soil properties, Dodamarg, Northern Western Ghats, India", "description": "Soil properties of cashew orchards of the Northern Western Ghats, India  This project contains chemical properties of soil collected from cashew orchards of Dodamarg, Northern Western Ghats, for a study investigating the factors influencing the effects of forest cover, flower abundance, temperature and (potentially) soil composition on cashew pollinators.  Taxonomic Coverage:\u00a0Not applicable  Geographic Coverage: Dodamarg, Sindhudurg District, Maharashtra, India  Temporal Coverage: March 2025  \u00a0  Description of field and lab methods  Soil collection: Soil samples were collected from 30 cashew orchards, using soil core sampler. The diameter of the core sampler was measured before soil collection. All soil samples were collected from 10 cm depth after removing all the leaf litter from the ground. From each orchard, 10 soil columns were collected for analysis of chemical properties.  Chemical Properties: We estimated thirteen soil chemical properties for all soil samples collected. The following parameters were analyzed by Zuari Farmhubs Laboratory: pH, electrical conductivity (E.C.) at 25\u00b0C, organic carbon (O.C.), available phosphorus (P\u2082O\u2085), available potassium (K\u2082O), available calcium (Ca), magnesium (Mg), sulfur (S), boron (B), zinc (Zn), iron (Fe), copper (Cu), and manganese (Mn).  More details about the data can be obtained from Aditya Satish (adityasatish@ncf-india.org) and Rohit Naniwadekar (rohit@ncf-india.org) from the Nature Conservation Foundation (www.ncf-india.org).  File Descriptions:  Data file: Dodamarg_2025_Cashew_Soil_Properties.csv  We have also included a ReadMe.txt file that explains the data file, akin to the description in the metadata.  Description of the columns of the data file:    Sl no: Serial number  Site: Site ID  Code: Site code (General location)  Latitude: latitude co-ordinate of the plot (in decimal degrees, \u00b0N)  Longitude: longitude co-ordinate of the plot (in decimal degrees, \u00b0E)  pH: pH of the soil  E.C.: Electrical Conductivity at 25\u00b0C (in dS/m)  O.C.: Organic Carbon (in %)  P\u2082O\u2085: Available P\u2082O\u2085 (in Kg /acre)  K\u2082O: Available Potassium (in Kg /acre)  Ca: Available Calcium (in mg/Kg)  Mg: Available Magnesium (in mg/Kg)  S: Available Sulphur (in mg/Kg)  B: Available Boron (in mg/Kg)  Zn: Available Zinc (in mg/Kg)  Fe: Available Iron (in mg/Kg)  Cu: Available Copper (in mg/Kg)  Mn: Available Manganese (in mg/Kg)   Funding:\u00a0  Godrej Consumer Products Limited  Arvind Datar  Rohini Nilekani Philanthropies", "keywords": ["Soil chemical properties", "Cashew orchards", "Ecology", "FOS: Biological sciences", "Northern Western Ghats"], "contacts": [{"organization": "Sadekar, Vishal, Satish, Aditya, Naniwadekar, Rohit,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.16017208"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.16017208", "name": "item", "description": "10.5281/zenodo.16017208", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.16017208"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-17T00:00:00Z"}}, {"id": "10.5281/zenodo.3591992", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:23:11Z", "type": "Dataset", "title": "Organic matter content (om) soil maps of the Upper Colorado River Basin", "description": "UPDATE: WE FOUND A RENDERING ERROR IN MANY AREAS OF THE 5 CM MAP. WE HAVE RECREATED THE MAP AND INCLUDED IN A NEW VERSION OF THE REPOSITORY. Repository includes maps of organic matter content (% wt) as defined by United States soil survey program. These data are preliminary or provisional and are subject to revision. They are being provided to meet the need for timely best science. The data have not received final approval by the U.S. Geological Survey (USGS) and are provided on the condition that neither the USGS nor the U.S. Government shall be held liable for any damages resulting from the authorized or unauthorized use of the data. This data should be used in combination with a soil depth or depth to restriction layer map (both layers that will be released soon as part of this project) to eliminate areas mapped at deeper depths than the soil actually goes. This is a limitation of this data which will hopefully be updated in future updates. The creation and interpretation of this data is documented in the following article. Please note this article has not been reviewed yet and this citation will be updated as the peer review process proceeds. Nauman, T. W., Duniway, M. C., In Preparation. Predictive reconstruction of soil survey property maps for field scale adaptive land management. Soil Science Society of America Journal. File Name Details: ACCURACY!! Please see manuscript and Github repository (https://github.com/naumi421/SoilReconProps) for full details on accuracy. We do provide cross validation (CV) accuracy plots in this repository for both the overall sample (_CV_plots.tif). These plots compare CV predictions with observed values relative to a 1:1 line. Values plotted near the 1:1 line are more accurate. Note that values are plotted in hex-bin density scatter plots because of the large number of observations (most are &gt;3000). Predictions are also evaluated with the U.S. soil survey laboratory database soil organic carbon (SOC) data. The SOC measurements were coverted to OM matter values using the common 1.724 conversion factor. The converted OM values are compared to predicted OM values using an accuracy plot (OM_SOC_plots.tif). Elements are separated by underscore (_) in the following sequence: property_r_depth_cm_geometry_model_additional_elements.extension Example: om_r_0_cm_2D_QRF_bt.tif Indicates soil organic matter content (om) at 0 cm depth using a 2D model (separate model for each depth) employing a quantile regression forest. This file is the raster prediction map for this model. There may be additional GIS files associated with this file (e.g. pyramids) that have the same file name, but different extensions. The _bt indicates that the map has been back transformed from ln or sqrt transformation used in modeling. The following elements may also exist on the end of filenames indicating other spatial files that characterize a given model's uncertainty (see below). _95PI_h: Indicates the layer is the upper 95% prediction interval value. _95PI_l: Indicates the layer is the lower 95% prediction interval value. _95PI_relwidth: Indicates the layer is the 95% relative prediction interval (RPI). The RPI is a standardization of the prediction interval that indicates that model is constraining uncertainty relative to the original sample. RPI values less than one represent uncertainty is being improved by the model relative to the original sample, and values less than 0.5 indicate low uncertainty in predictions. See paper listed above and also Nauman and Duniway (In revision) for more details on RPI. References Nauman, T. W., and Duniway, M. C., In Revision, Relative prediction intervals reveal larger uncertainty in 3D approaches to predictive digital soil mapping of soil properties with legacy data: Geoderma", "keywords": ["2. Zero hunger", "13. Climate action", "soil organic matter", "digital soil mapping", "15. Life on land", "6. Clean water", "predictive soil mapping", "soil property mapping"], "contacts": [{"organization": "Nauman, Travis", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.3591992"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.3591992", "name": "item", "description": "10.5281/zenodo.3591992", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.3591992"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-01-28T00:00:00Z"}}, {"id": "10.5281/zenodo.5574882", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:23:16Z", "type": "Report", "created": "2020-03-09", "title": "Hyperspectral imaging for high resolution mapping of soil profile organic carbon distribution in an Austrian Alpine landscape", "description": "<p>         &amp;lt;p&amp;gt;Studies on soil organic carbon (SOC) stocks mostly focus on topsoils (&amp;lt; 30 cm). However, 30 to 63% of the SOC are stored in the subsoils (30 to 100 cm), and the factors controlling SOC storage in subsoils may be substantially different than in topsoils. The low mean SOC content in subsoils makes its quantification and characterization challenging. Thus, new approaches are required to depict the SOC stocks distribution in full soil profile. Hyperspectral imaging of soil core samples can provide high spatial resolution of the vertical distribution of SOC in a soil profile. The main objective of the ongoing study, within the Horizon 2020 European Project Circular Agronomics, is to apply laboratory hyperspectral imaging with a variety of machine learning approaches for the mapping of OC distribution in undisturbed soil cores. Soil cores were collected down to a depth of one meter in grasslands of 15 organic farms located in the Lungau Valley, in Austria. Some samples were divided into five depths in the field for classical bulk soil measurements (total carbon and nitrogen, texture, pH, EC and bulk density) on disturbed samples. Undisturbed soil cores were sliced vertically for laboratory hyperspectral imaging in the range of Vis-NIR (400-1000 nm). We were able to reveal the hotspots of OC and map the OC distribution in soil profile by applying a variety of machine learning approaches (i.e. partial least square and random forest regression) as a function of spectral responses. A digital elevation model was further exploited to investigate the effects of topographical factors such as elevation, aspect and slope on SOC profile distribution. Landsat 8 data were also used to depict the spatial variability of land insensitive cover/vegetation in study area.&amp;lt;/p&amp;gt;         </p>", "keywords": ["2. Zero hunger", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Vis-NIR imaging spectroscopy", " Alpine grassland", " Digital elevation model", " Subsoils"], "contacts": [{"organization": "YASER OSTOVARI, K\u00f6ppend\u00f6rfer, Baptist, Guigue, Julien, Van Groenigen, Jan Willem, Creamer, Rachel, Guggenberger, Thomas, Grassauer, Florian, Hobley, Eleanor, Ferron, Laura, Martens, Henk, K\u00f6gel-Knabner, Ingrid, Vidal, Alix,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.5574882"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.5574882", "name": "item", "description": "10.5281/zenodo.5574882", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.5574882"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-23T00:00:00Z"}}, {"id": "10.5281/zenodo.7041393", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:23:24Z", "type": "Other", "title": "QBS-ar and QBS-ar_BF index toolbox for biodiversity assessment of microarthropods community in soil", "description": "This toolbox contains a proposal and detailed instructions for the standardization of the QBS-ar index procedure. The QBS-ar index (Parisi, 2001; Parisi et al., 2005) is an index aimed at assessing soil-dwelling microarthropod communities in relation to their soil adaptation level. The core of QBS-ar index principle is: the higher is soil quality, the higher will be the number of microarthropod groups well adapted to soil habitats living there. Soil quality here stands for good stability, high organic matter content, and good biodiversity level. Worth of notice, QBS-ar is not comprehensive of the whole soil biodiversity or whole soil quality.\u00a0  For each sample to be assessed with the QBS-ar method, three different samplings are performed 5-10 meters apart (Menta et al., 2018), obtaining three subsamples (replicates) that are considered representative of an area homogeneous for slope and vegetation. 1-page guidelines for sampling and extraction were detailed in file\u00a0\u20181.QBS-ar sampling and extraction guidelines.pdf\u2019.\u00a0  The functional characteristics for soil adaptation of microarthropods are the reduction of visual structures as microphthalmia or even anophthalmia, the reduction or loss of pigmentation and dehydration adaptations (thinner cuticle, shorter setas or chaeta loss), appendage reduction (as shorter and/or smaller antennae, legs, furca), miniaturization, streamlined body form. Starting from these principles, soil organisms could be divided into a discrete set of Biological Forms (BFs, eco-morpho-types) according to their morphological adaptation to soil (Menta et al., 2018); in the EXCALIBUR and EJP-Minotaur projects, CREA Research Centre for Agriculture and Environment, in collaboration with the National QBS-ar working group (D\u2019Avino et al., 2021), recognized no less than 54 different BFs, 16 of which were classified as less frequent. Each BF is shortly described and\u00a0 associated with a score, the so-called Eco-Morphological Index (EMI), which ranges from 1 to 20 in proportion to the increasing degree of the soil adaptation of microarthropods. As reported by Parisi et al. (2005), some taxa show only one single EMI value because all species belonging to these taxa report the same adaptation level to the soil. Other groups show a range of EMIs in relation to the different adaptation levels of species to the soil. In general, eu-edaphic forms get EMI = 20, hemi-edaphic get an EMI rating proportionate to their degree of soil adaptation, while epedaphic (epigean) forms get EMI score = 1 (Menta et al., 2018). In QBS-ar whenever two eco-morphological forms are present in the same group, the final score is determined by the higher EMI. In other words, the most highly adapted microarthropods belonging to a group determine the overall EMI score for that group (Parisi et al 2005). This statement is not valid for the QBS-ar_BF proposed here, for which every biological form concurs to the calculation of QBS-ar_BF index, regardless of whether or not it belongs to the same group (i.e. class or order). Moreover, to assess variability between subsamples (replicates) an index based on spectral analysis (D\u2019Avino, 2019) is proposed. The file\u00a0\u20182.Sheet for QBS-ar record and calculation_v2.xlsx\u2019\u00a0provides the selection of 54 most common BFs in European soils and should be used as a template for data registration during the microarthropods identification and count at the stereomicroscope. As outlined in the \u201cREADME\u201d sheet of the excel file, the user should register the abundance of each BF and other sampling-related information, and the template will automatically perform a series of calculations and will format several output sheets. In particular it calculates: mean abundance of microarthropods and relative class of abundance,\u00a0QBS-ar, QBS-ar_BF, variability index community based on spectral analysis.\u00a0  One example of the compilated sheet is reported as file\u00a0\u20182a.Filled_template_example_v2.pdf\u2019. The sampling was carried out during MINOTAUR project, the example was implemented starting from file\u00a0\u20182. Sheet for QBS-ar record and calculation.xlsx\u2019.\u00a0  \u00a0The file '2.1.Sheet for QBS-ar record and calculations_v2.1.xlsx' contains updates to the previous version:      In the \u2018QBS-ar sheet\u2019 the formulas for calculating Density n.m-2, Class n.m-2, Density n.kg-1 and S1 in Pauropoda_20 have been corrected     In the \u2018\u201dExport_Subsamples\u201d sheet, the formula of Pauropoda_20 has been corrected     In the \u2018Export_MINOTAUR\u2019 sheet the formulas for Hymenoptera_AB, Hymenoptera_Number_taxa, Diplopoda_AB and Diplopoda_Number_taxa have been corrected     In the \u2018Codelist\u2019 sheet, Pest_control_method_Insecticide was added between Main_Pest_control_methods    The file '2.Sheet for QBS-ar record and calculation. vers_3.xlsx' is the latest version of the sheet. It contains several updates regarding the metadata that can be entered, updated descriptions of the biological forms and their common name. The order of the biological forms has been changed from the previous version: Hymenoptera-L_10 has been moved between the rare forms and Symphyla_20 has been moved between Chilopoda_20 and Pauropoda_20. One example of the compilated sheet is reported as file\u00a0\u20182a.Filled_template_example_v3.pdf\u2019.  This file also contains a new printable sheet called 'Data_report' that automatically summarizes the values of the QBS indices, diversity indices (Shannon, Evenness, Simpson and Richness) and abundances per square meter of the different biological forms along with the graphs.  The collection, merging and organization of data from the precompiled sheet could be a cumbersome task, especially for surveys with many different samples. The user would need to copy-paste each row in the \u201cExport_Sample\u201d or \u201cExport_Subsample\u201d sheets (from file 2.) to a new file, to perform overall analysis; an error-prone operation. To ease this process, we have compiled a short R script that can be found in this submission as the third file\u00a0\u20183.QBS-ar data merging_v2.R\u2019. By using the script, the user would automatically obtain three files (csv and/or xlsx, that will be stored in a \u201cResults\u201d folder) resulting from the merging of any number of QBS precompiled templates collected in a folder:\u00a0\u00a0  1. The result of the merge of \u201cExport_Sample\u201d sheets\u00a0  2. The result of the merge of \u201cExport_Subsample\u201d sheets\u00a0\u00a0  3. The result of the merge of\u00a0 'Export_MINOTAUR' sheets\u00a0  The latest version of the script is \u201c3.QBS-ar data merging_v3.R\u201d  It is recommended to use this version for the file \u201c2.Sheet for QBS-ar record and calculation. vers_3.xlsx\u201d  \u00a0  Cited reference\u00a0  D\u2019Avino, L., Menta, C., Jacomini, C., Cassi, F., L\u2019Abate, G., La Terza, A., Staffilani, F., Pocaterra, F., Piazzi, M., Parisi, V. (2021). The Italian skill network of Soil Biological Quality assessed by microarthropods\u2019 community, in: FAO. 2021. Keep soil alive, protect soil biodiversity \u2013Global Symposium on Soil Biodiversity 19\u201322 April 2021. Proceedings. Rome. ISBN [978-92-5-135218-2] pages 182-188. Available at\u00a0https://doi.org/10.4060/cb7374en\u00a0(accessed 11/11/2024)\u00a0  D\u2019Avino 2019. Soil mesofauna QBS-ar index in: Malusa et al. Common guidelines for analytical methods.\u00a0\u00a0https://cordis.europa.eu/project/id/817946/results/it\u00a0(Accessed 11/11/2024)\u00a0  Menta, C., Conti, F. D., Pinto, S., Bodini, A. (2018). Soil Biological Quality index (QBS-ar): 15 years of application at global scale. Ecological Indicators, 85, 773-780.\u00a0  Parisi V. (2001). La qualit\u00e0 biologica del suolo. Un metodo basato sui microartropodi [In Italian] Acta Naturalia de L\u2019Ateneo Parmense 37, 97-106.\u00a0  Parisi, V., Menta, C., Gardi, C., Jacomini, C., Mozzanica, E. (2005). Microarthropod communities as a tool to assess soil quality and biodiversity:\u00a0 a new approach in Italy. Agriculture, Ecosystems & Environment, 105 (12), 323-333.", "keywords": ["Data manipulation", "Mesofauna", "QBS data template", "Soil biodiversity", "Soil quality"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.7041393"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.7041393", "name": "item", "description": "10.5281/zenodo.7041393", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.7041393"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-11-11T00:00:00Z"}}, {"id": "10.5281/zenodo.7856487", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:23:30Z", "type": "Dataset", "title": "HiLSS Project", "description": "This\u00a0repository is periodically updated.   Historic Landscape and Soil Sustainability (MSCA-IF-2019 - Individual Fellowships)   The HiLSS Project aims to investigate the relationships between sustainability and landscape heritage with particular reference to soil loss and degradation over the long term. The project will take a multidisciplinary approach that combines archaeology, Historical Landscape Characterisation (HLC), geosciences, and computer-based geospatial analysis (GIS - Geographical Information Systems) and modelling (RUSLE - Revisited Universal Soil Loss Equation). The research objectives of the HiLSS project are to quantify the impact of human activities during the Late Holocene in order to create spatial models which can inform the development of sustainable conservation strategies for rural landscape heritage. This project will focus on two mountainous regions that present historical and cultural similarities but located in different climatic zones of Europe (1- Tuscan-Emilian Apennines, Italy; 2- Northern-mid Galicia, Spain). In previous HLC studies, land-use has been evaluated from the perspective of cultural heritage, whereas RUSLE have used it as a proxy for the land-cover of an area and its effect on soil erosion. The HiLSS project will propose an innovative methodology that combines both the historic/cultural values and the environmental values of land-use to inform development of a model for the sustainable conservation. By considering the different agricultural land-use HLC types in GIS-RUSLE modelling, it will be possible to quantify the effect on soil loss for each HLC type and consequently to devise more environmentally sustainable management for each type. Environmental sustainability and historic landscape conservation are typically treated as two separate fields, but the HiLSS project will develop a transformative model for interdisciplinary research, proposing a new way to embrace both cultural and natural values as components of the same landscape management plans.     HLC_RUSLE.zip    The R script code was developed by dr. F. Brandolini (Newcastle University, UK) to accompany the paper: 'Brandolini, F., Kinnaird, T.C., Srivastava, A., Turner S. -\u00a0Modelling the impact of historic landscape change on soil erosion and degradation. Sci Rep 13, 4949 (2023)'.   List of files included in HLC_RUSLE.zip:      R_script_code named 'HLC_RUSLE'\u00a0in .rmd format   Output folder:        Figures folder: .png products of the R script code    Rasters\u00a0folder: .png products of the R script code    Tables\u00a0folder: .pdf\u00a0products of the R script code       GeoTiff folder (.TIFF file format): Regional RUSLE\u00a0Data   GPKG:\u00a0HLC dataset\u00a0and\u00a0Region Of Interest file in .gpkg format      Spatial statistics to reveal patterns and connections in the historic landscape    The R script code was developed by dr. F. Brandolini (Newcastle University, UK) to accompany the paper: '\u00a0F.\u00a0Brandolini & S.\u00a0Turner\u00a0(2022)\u00a0Revealing patterns and connections in the historic landscape of the northern Apennines (Vetto, Italy),\u00a0Journal of Maps,\u00a0DOI:\u00a010.1080/17445647.2022.2088305.\u00a0'.   It is available at:\u00a0https://doi.org/10.5281/zenodo.5907229     Supplementary material_Land _SI_Historic Landscape Evolution.zip    Supplementary Materials to accompaing\u00a0the paper:\u00a0The evolution of historic agroforestry landscape in the Northern Apennines (Italy) and its consequences for slope geomorphic processes, submitted to\u00a0Land,\u00a0Special Issue\u00a0Historic Landscape Transformation.     Project_Publications.zip    List of .pdf file included in the folder:\u00a0   1) Brandolini F, Domingo-Ribas G, Zerboni A and Turner S. A Google Earth Engine-enabled Python approach for the identification of anthropogenic palaeo-landscape features [version 2; peer review: 2 approved, 1 approved with reservations]. Open Res Europe 2021,\u00a01:22\u00a0(https://doi.org/10.12688/openreseurope.13135.2)   2) Brandolini F., Turner S.\u00a0 2022 - Revealing patterns and connections in the historic landscape of the northern Apennines (Vetto, Italy), \u00a0Journal of Maps,\u00a0 (https://doi.org/10.1080/17445647.2022.2088305)   3) Brandolini, F., Kinnaird, T.C., Srivastava, A., Turner S. 2023 -\u00a0Modelling the impact of historic landscape change on soil erosion and degradation. Sci Rep 13, 4949 (2023), (https://doi.org/10.1038/s41598-023-31334-z)   4)\u00a0Brandolini, F., Compostella, C., Pelfini, M., and Turner, S. 2023 - 'The Evolution of Historic Agroforestry Landscape in the Northern Apennines (Italy) and Its Consequences for Slope Geomorphic Processes' Land 12, no. 5: 1054. (https://doi.org/10.3390/land12051054)", "keywords": ["2. Zero hunger", "13. Climate action", "Landscape Archaeology", "11. Sustainability", "RUSLE", "USPED", "15. Life on land", "Historic Landscape Characterisation", "Soil Sustainability", "Soil Erosion Modelling", "12. Responsible consumption"], "contacts": [{"organization": "Brandolini Filippo", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.7856487"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.7856487", "name": "item", "description": "10.5281/zenodo.7856487", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.7856487"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-10-10T00:00:00Z"}}, {"id": "10.5281/zenodo.8089699", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:23:32Z", "type": "Journal Article", "created": "2019-11-28", "title": "High-resolution and three-dimensional mapping of soil texture of China", "description": "The lack of detailed three-dimensional soil texture information largely restricts many applications in agriculture, hydrology, climate, ecology and environment. This study predicted 90 m resolution spatial variations of sand, silt and clay contents at a national extent across China and at multiple depths 0\u20135, 5\u201315, 15\u201330, 30\u201360, 60\u2013100 and 100\u2013200 cm. We used 4579 soil profiles collected from a national soil series inventory conducted recently and currently available environmental covariates. The covariates characterized environmental factors including climate, parent materials, terrain, vegetation and soil conditions. We constructed random forest models and employed a parallel computing strategy for the predictions of soil texture fractions based on its relationship with the environmental factors. Quantile regression forest was used to estimate the uncertainty of the predictions. Results showed that the predicted maps were much more accurate and detailed than the conventional linkage maps and the SoilGrids250m product, and could well represent spatial variation of soil texture across China. The relative accuracy improvement was around 245\u2013370% relative to the linkage maps and 83\u2013112% relative to the SoilGrids250m product with regard to the R2, and it was around 24\u201326% and 14\u201319% respectively with regard to the RMSE. The wide range between 5% lower and 95% upper prediction limits may suggest that there was a substantial room to improve current predictions. Besides, we found that climate and terrain factors are major controllers for spatial patterns of soil texture in China. The heat and water-driven physical and chemical weathering and wind-driven erosion processes primarily shape the pattern of clay content. The terrain, wind and water-driven deposition, erosion and transportation sorting processes of soil particles primarily shape the pattern of silt. The findings provide clues for modeling future soil evolution and for national soil security management under the background of global and regional environmental changes.", "keywords": ["2. Zero hunger", "Digital soil mapping", "13. Climate action", "Large extent", "Machine learning", "Environmental factors", "Uncertainty", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.5281/zenodo.8089699"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.8089699", "name": "item", "description": "10.5281/zenodo.8089699", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.8089699"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-01T00:00:00Z"}}, {"id": "10.5281/zenodo.8109600", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:23:34Z", "type": "Dataset", "title": "Data on soil compounds, respiration and incorporation of 13C-labeled substrate", "description": "Open AccessSee Readme.pdf", "keywords": ["2. Zero hunger", "microdialysis", "respiration rates", "compound concentration in soil solution", "PLFA and NLFA", "13C isotopic labeling", "15. Life on land", "6. Clean water"], "contacts": [{"organization": "Wiesenbauer, Julia, Kaiser, Christina,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5281/zenodo.8109600"}, {"rel": "self", "type": "application/geo+json", "title": "10.5281/zenodo.8109600", "name": "item", "description": "10.5281/zenodo.8109600", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5281/zenodo.8109600"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-07-18T00:00:00Z"}}, {"id": "10.7910/DVN/GVNJAB", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:17Z", "type": "Dataset", "created": "2019-06-24", "title": "Physical topsoil  properties in Murugusi, Western Kenya", "description": "Open Access&lt;b&gt;General:&lt;/b&gt; Lab determined topsoil bulk density, contents of sand, clay and organic carbon in Murugusi, W. Kenya, together with spatial coordinates of where the soil samples were taken (rounded to the closest center point of a 250 m \u00d7 250 m raster). All lab analyses were carried out at the ILRI/CIAT lab in Nairob, Kenya.  &lt;br&gt;  &lt;b&gt;Soil sampling:&lt;/b&gt; At each sample location, one composite topsoil sample was taken; three cores of 7 cm in diameter taken within an area of one square meter. The soil was taken from 0-0.2 m depth below any organic (O) horizon.   &lt;br&gt;  &lt;b&gt;Determination of soil properties:&lt;/b&gt; The bulk density of the soil was determined by taking two undisturbed soil samples (0-10 cm and 10-20 cm depth) of known volume (100 cm2) and weighting them after air drying. Soil fractions of clay (&lt;0.002 mm) and sand (0.05-2 mm) were determined by the hydrometer method (Estefan et al., 2014), using 10% sodium hexametaphosphate as the dispersing agent. Soil pH was determined potentiometrically on a soil suspension of 1:2 (soil: water). Total carbon was measured after dry combustion using an elemental analyser (Elementar Vario max cube; ISO 10694, first edition 1995-03-01)  &lt;br&gt;  &lt;b&gt;Reference: &lt;/b&gt;Estefan G., Sommer R., Ryan J. (2014) Analytical Methods for Soil-Plant and Water in Dry Areas. A Manual of Relevance to the West Asia and North Africa Region. 3rd Edition, International Center for Agricultural Research in the Dry Areas, Aleppo, 255 pp. Available online at: http://repo.mel.cgiar.org:8080/handle/20.500.11766/7512?show=full. Verified: October 9, 2018.  &lt;br&gt;  &lt;b&gt;Acknowledgements: &lt;/b&gt; We are deeply thankful for the good services provided by John Mukulama (soil sampling), John Yumbya Mutua (soil sampling) and Francis Mungthu Njenga (lab analyses) The project was carried out within the CGIAR Research Program on Water, Land and Ecosystems (WLE).", "keywords": ["Soil organic matter", "Agricultural Sciences", "Soil organic carbon", "sand", "Kenya", "Carbon", "Latin America and the Caribbean", "soil", "Soil", "Soil bulk density", "Sand", "soil organic matter", "Earth and Environmental Sciences", "Soil texture", "Murugusi", "Africa", "Clay", "Texture", "Western Kenya", "Agroecosystems and Sustainable Landscapes - ASL"], "contacts": [{"organization": "Piikki, Kristin, S\u00f6derstr\u00f6m, Mats, Sommer, Rolf, Da Silva, Mayesse,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.7910/DVN/GVNJAB"}, {"rel": "self", "type": "application/geo+json", "title": "10.7910/DVN/GVNJAB", "name": "item", "description": "10.7910/DVN/GVNJAB", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.7910/DVN/GVNJAB"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-01-01T00:00:00Z"}}, {"id": "10.7910/DVN/HXAH87", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:17Z", "type": "Dataset", "title": "Arbuscular and ectomycorrhizal fungi diversity in the Indian subcontinent", "description": "Mycorrhizal fungi (MF) are below-ground organisms playing a key role in terrestrial ecosystems as they regulate nutrient and carbon cycles, and influence soil structure and ecosystem multifunctionality. Arbuscular and ectomycorrhizal fungi are the two mycorrhizal types most relevant to worldwide ecosystems, but areas like the Indian sub-continent remain under-represented in global maps. The dataset presented here reports the available information regarding arbuscular and ectomycorrhizal fungi diversity in cultivated and natural ecosystems of the Indian subcontinent. We have selected studies published in English in ISI Web of Science during the years 2005 - 2020 that provided a taxonomic classification of MF and their associated abundance in terms of percentage of root colonization or number of spores per quantity of soil. From the screening of 74 studies, we have recorded: i. the scientific or common name of the plant or the generic habitat sampled for MF identification; ii the MF genus and species; iii. the location of the study with associated altitude and geographic coordinates; iv. main soil physico-chemical properties (soil pH, texture, organic Carbon, Total Nitrogen, available Phosphorus); climatic variables such as mean annual precipitation and temperature.&lt;br&gt;&lt;br&gt;", "keywords": ["ecosystem management", "Asia", "Agricultural Sciences", "CGIAR Research Program on Water", " Land and Ecosystems", "Multifunctional Landscapes", "gesti\u00f3n de ecosistemas", "soil biology", "MYCORRHIZAE", "CGIAR Research Program", "Earth and Environmental Sciences", "SOIL BIOLOGY", "BIODIVERSITY", "mycorrhizae", "biolog\u00eda del suelo"], "contacts": [{"organization": "Beggi, Francesca, Dasgupta, Debarshi,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.7910/DVN/HXAH87"}, {"rel": "self", "type": "application/geo+json", "title": "10.7910/DVN/HXAH87", "name": "item", "description": "10.7910/DVN/HXAH87", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.7910/DVN/HXAH87"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-01-01T00:00:00Z"}}, {"id": "11369/372709", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:47Z", "type": "Journal Article", "created": "2018-09-07", "title": "Soil resources and element stocks in drylands to face global issues", "description": "Abstract<p>Drylands (hyperarid, arid, semiarid, and dry subhumid ecosystems) cover almost half of Earth\uffe2\uff80\uff99s land surface and are highly vulnerable to environmental pressures. Here we provide an inventory of soil properties including carbon (C), nitrogen (N), and phosphorus (P) stocks within the current boundaries of drylands, aimed at serving as a benchmark in the face of future challenges including increased population, food security, desertification, and climate change. Aridity limits plant production and results in poorly developed soils, with coarse texture, low C:N and C:P, scarce organic matter, and high vulnerability to erosion. Dryland soils store 646 Pg of organic C to 2\uffe2\uff80\uff89m, the equivalent of 32% of the global soil organic C pool. The magnitude of the historic loss of C from dryland soils due to human land use and cover change and their typically low C:N and C:P suggest high potential to build up soil organic matter, but coarse soil textures may limit protection and stabilization processes. Restoring, preserving, and increasing soil organic matter in drylands may help slow down rising levels of atmospheric carbon dioxide by sequestering C, and is strongly needed to enhance food security and reduce the risk of land degradation and desertification.</p", "keywords": ["2. Zero hunger", "0301 basic medicine", "Conservation of Natural Resources", "0303 health sciences", "Multidisciplinary", "Nitrogen", "Climate", "Climate Change", "Phosphorus", "15. Life on land", "Article", "Carbon", "Food Supply", "Soil", "03 medical and health sciences", "element cycles", "13. Climate action", "carbon cycle", "Life Science", "Humans", "Desert Climate", "Ecosystem", "geochemistry"]}, "links": [{"href": "https://iris.univr.it/bitstream/11562/1001390/1/Soil%20resources%20and%20element%20stocks%20in%20drylands%20to%20face%20global%20issues.pdf"}, {"href": "https://www.nature.com/articles/s41598-018-32229-0.pdf"}, {"href": "https://doi.org/11369/372709"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Scientific%20Reports", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11369/372709", "name": "item", "description": "11369/372709", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11369/372709"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2018-09-13T00:00:00Z"}}, {"id": "11379/629705", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:47Z", "type": "Journal Article", "created": "2025-07-19", "title": "Role of Biodegradable and Non-Biodegradable Microplastic in Modulating the toxicological Effects of Organic Pollutants in the Soil Organism Folsomia candida", "description": "Abstract                   <p>                     The ecotoxicological effects of microplastics in soil ecosystems are complex, particularly in areas of intensive agriculture and livestock production, where plant protection products and veterinary drugs commonly coexist with plastic residues. In this study, we investigated the impact, under laboratory conditions, of 3 MP types (non-biodegradable low-density polyethylene (LDPE) and biodegradable polybutylene adipate terephthalate-based (PBAT-based) and a starch-based polymer) on the soil-dwelling species                     Folsomia candida                     (Willem, 1902) in soils contaminated with the anthelmintic albendazole and the fungicide pyraclostrobin. These organic pollutants (OPs) are frequently found in areas of intensive agriculture and livestock production.                     F. candida                     individuals were exposed for 28\uffc2\uffa0days to soils contaminated by the OPs at 0.0001 w/w% (1\uffc2\uffa0mg/kg), with and without MPs at 0.01 and 0.1 w/w% concentrations (100 and 1000\uffc2\uffa0mg/kg respectively), under laboratory conditions (21\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff891 C\uffc2\uffb0, 80%\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff891 RH). Adults\uffe2\uff80\uff99 survival, egg production, and juveniles\uffe2\uff80\uff99 occurrence were recorded as endpoints. Our findings indicate that microplastics alone did not significantly affect the survival and reproductive outcomes of                     F. candida                     . However, in soils contaminated with albendazole and pyraclostrobin, the presence of biodegradable MPs resulted in significant effects compared to the control and the treatment with only microplastics. Specifically, PBAT-based MPs significantly impacted adult survival, juvenile occurrence, and egg counts, while starch-based MPs primarily affected egg counts. On the contrary, co-exposure to OPs and LDPE MPs did not show significant effects. These results suggest that different MPs influence the bioavailability and toxicity of co-occurring fungicides and veterinary drug in soil ecosystems in different ways, with implications for assessing the ecological risks of biodegradable and non-biodegradable plastics in contaminated soils. The potential of MPs to influence the spatial distribution and bioavailability of organic pollutants for soil mesofauna needs further investigation.                   </p", "keywords": ["Soil ecotoxicology", "Pyraclostrobin", "Microplastics (MPs)", "Organic pollutants (OPs)", "Albendazole", "Biodegradable plastics", "Microplastics (MPs)", " Biodegradable plastics", " Organic pollutants (OPs)", " Albendazole", " Pyraclostrobin", " Soil ecotoxicology", " Folsomia candida", "Folsomia candida"]}, "links": [{"href": "https://iris.unibs.it/bitstream/11379/629705/1/s11270-025-08351-x.pdf"}, {"href": "https://doi.org/11379/629705"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Water%2C%20Air%2C%20%26amp%3B%20Soil%20Pollution", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11379/629705", "name": "item", "description": "11379/629705", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11379/629705"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-07-19T00:00:00Z"}}, {"id": "11585/996230", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:52Z", "type": "Journal Article", "created": "2023-10-10", "title": "Beyond PLFA: Concurrent extraction of neutral and glycolipid fatty acids provides new insights into soil microbial communities", "description": "The analysis of phospholipid fatty acids (PLFAs) is one of the most common methods used to quantify the abundance, and analyse the community structure, of soil microbes. The PLFA extraction method can yield two additional lipid fractions\u2014neutral lipids and glycolipids\u2014which potentially hold additional, valuable information on soil microbial communities. Yet its quantitative sensitivity on complete neutral lipid (NLFA) and glycolipid fatty acid (GLFA) profiles has never been validated. In this study we tested (i) if the high-throughput PLFA method can be expanded to concurrently extract complete NLFA and GLFA profiles, as well as sterols, (ii) whether taxonomic specificities of signature fatty acids are retained across the three lipid fractions in pure culture strains, and (iii) whether NLFAs and GLFAs allow soil-specific fingerprinting to the same extent as PLFA analysis. By adjusting the polarity of chloroform with 2% ethanol for solid phase extraction, pure lipid standards were fully fractionated into neutral lipids, glycolipids, and phospholipids. Sterols eluted in the neutral lipid fraction, and a betaine lipid co-eluted with phospholipids. We found consistent taxonomic specificities of fatty acid markers across the three lipid fractions by analysing pure culture extracts representative of soil microbes. Fatty acid profiles from soil extracts, however, showed stronger differences between PLFAs, NLFAs, and GLFAs than between soil types. This indicates that PLFAs and NLFAs signify different community properties (biomass vs. carbon storage, putatively), and that GLFAs are sensitive markers for community traits which behave differently than PLFAs. Although we consistently found high abundances of characteristic sterols in fungal extracts, the PLFA extraction method only yielded miniscule amounts of ergosterol from soil extracts. We argue that concomitant measurement of fatty acid profiles from all three lipid fractions is a low-effort and potentially information-rich addition to the PLFA method, and discuss its applicability for soil microbial community analyses.", "keywords": ["0301 basic medicine", "2. Zero hunger", "106022 Mikrobiologie", "0303 health sciences", "15. Life on land", "Soil lipids", "03 medical and health sciences", "106026 \u00d6kosystemforschung", "NLFA", "Ergosterol", "Ergosterol; GLFA; NLFA; Phospholipid fatty acids; Soil lipids", "Phospholipid fatty acid", "soil lipids", "Phospholipid fatty acids", "106022 Microbiology", "GLFA", "106026 Ecosystem research"]}, "links": [{"href": "https://doi.org/11585/996230"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Biology%20and%20Biochemistry", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "11585/996230", "name": "item", "description": "11585/996230", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/11585/996230"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-12-01T00:00:00Z"}}, {"id": "14280e45-7eee-4f1c-93cd-9f00083ddcc8-envidat", "type": "Feature", "geometry": null, "properties": {"updated": "2020-08-20T13:49:14Z", "type": "Dataset", "language": "en", "title": "Anthropogenic change and soil net N mineralization", "description": "This dataset contains all data on which the following publication below is based.  Paper Citation:  Risch Anita C., Zimmermann, Stefan, Moser, Barbara, Sch\u00fctz, Martin, Hagedorn, Frank, Firn, Jennifer, Fay, Philip A., Adler, Peter B., Biederman, Lori A., Blair, John M., Borer, Elizabeth T., Broadbent, Arthur A.D., Brown, Cynthia S., Cadotte, Marc W., Caldeira, Maria C., Davies, Kendi F., di Virgilio, Augustina, Eisenhauer, Nico, Eskelinen, Anu, Knops, Johannes M.H., MacDougall, Andrew S., McCulley, Rebecca L., Melbourne, Brett A., Moore, Joslin L., Power, Sally A., Prober, Suzanne M., Seabloom, Eric W., Siebert, Julia, Silveira, Maria L. , Speziale, Karina L., Stevens, Carly J., Tognetti, Pedro M., Virtanen, Risto, Yahdjian, Laura, Ochoa-Hueso, Raul (accepted). Global impacts of fertilization and herbivore removal on soil net nitrogen mineralization are modulated by local climate and soil properties. Global Change Biology  Please cite this paper together with the citation for the datafile.  We assessed how the removal of mammalian herbivores (Fence) and fertilization with growth-limiting nutrients (N, P, K, plus nine essential macro- and micronutrients; NPK) individually, and in combination (NPK+Fence), affected potential and realized soil net Nmin across 22 natural and semi-natural grasslands on five continents. Our sites spanned a comprehensive range of climatic and edaphic conditions found across the grassland biome. We focused on grasslands, because they cover 40-50% of the ice-free land surface and provide vital ecosystem functions and services. They are particularly important for forage production and C sequestration. Worldwide, grasslands store approximately 20-30% of the Earth\u2019s terrestrial C, most of it in the soil (Schimel, 1995; White et al., 2000).", "formats": [{"name": "XLS"}], "keywords": ["ammonification", "ch", "climate", "fertilization", "global-change", "grassland", "herbivore", "mineralization", "nitrification", "nitrogen", "nutrient-network", "soil"], "contacts": [{"organization": "Anita C. Risch", "roles": ["creator"]}, {"organization": "https://envidat.ch/#/about", "roles": ["publisher"]}]}, "links": [{"href": "https://www.envidat.ch/#/metadata/anthropogenic-change-and-net-n-mineralization"}, {"href": "https://www.envidat.ch/dataset/anthropogenic-change-and-net-n-mineralization/resource/13089b78-5a54-47a5-abe2-243a1e32772d"}, {"href": "http://data.europa.eu/88u/dataset/14280e45-7eee-4f1c-93cd-9f00083ddcc8-envidat"}, {"rel": "self", "type": "application/geo+json", "title": "14280e45-7eee-4f1c-93cd-9f00083ddcc8-envidat", "name": "item", "description": "14280e45-7eee-4f1c-93cd-9f00083ddcc8-envidat", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/14280e45-7eee-4f1c-93cd-9f00083ddcc8-envidat"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"null": "date"}}, {"id": "-15d66dac-a389-4330-94c5-31b2ef12f9b6-", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:33:40Z", "type": "Dataset", "language": "is", "title": "Jar\u00f0vegur", "description": "\u00cdslenskur jar\u00f0vegur telst til eldfjallajar\u00f0ar (Andosol) a\u00f0 langmestum hluta, en eldfjallaj\u00f6r\u00f0 er jar\u00f0vegur sem myndast \u00e1 eldvirkum sv\u00e6\u00f0um heimsins. Eldfjallaj\u00f6r\u00f0 hefur afar s\u00e9rst\u00e6\u00f0a eiginleika sem greina hana fr\u00e1 \u00f6\u00f0rum jar\u00f0vegsger\u00f0um. \u00datb\u00fain var einf\u00f6ld flokkun fyrir \u00edslenskan jar\u00f0veg, sem m.a. byggist \u00e1 al\u00fej\u00f3\u00f0legum flokkunarkerfum en einnig \u00e1 vinnu Bj\u00f6rns J\u00f3hannessonar og \u00deorsteins Gu\u00f0mundssonar. Flokkunin gerir greinarmun \u00e1 i) jar\u00f0vegi au\u00f0na (glerj\u00f6r\u00f0 sem skiptist \u00ed melaj\u00f6r\u00f0, malarj\u00f6r\u00f0, sandj\u00f6r\u00f0 og vikurj\u00f6r\u00f0; ii) jar\u00f0vegi gr\u00f3ins lands me\u00f0 sortueiginleika (sortuj\u00f6r\u00f0, sem skiptist \u00ed br\u00fanj\u00f6r\u00f0, votj\u00f6r\u00f0 og svartj\u00f6r\u00f0), iii) l\u00edfr\u00e6nni m\u00f3j\u00f6r\u00f0 og a\u00f0 s\u00ed\u00f0ustu iv) \u00f6\u00f0rum jar\u00f0vegi sem er margv\u00edslegur a\u00f0 ger\u00f0. \u00cd s\u00ed\u00f0asta flokknum er bergj\u00f6r\u00f0 \u00fatbreiddust, en auk \u00feess m\u00e1 nefna freraj\u00f6r\u00f0 s\u00edfrerasv\u00e6\u00f0a og kalkj\u00f6r\u00f0. Jar\u00f0vegskorti\u00f0 var unni\u00f0 \u00e1 grundvelli sni\u00f0a og jar\u00f0vegss\u00fdna sem safna\u00f0 hefur veri\u00f0 v\u00ed\u00f0a um landi\u00f0. Korti\u00f0 er \u00e1 vektora formi og \u00ed m\u00e6likvar\u00f0a 1:500 000. \u00dea\u00f0 er m.a. hluti evr\u00f3pska jar\u00f0vegskortsins.  A soil map of Iceland: The Soil map classification separates between; 1) andic soils, which are Brown Andosols, Gleyic Andosols and Histic Andosols; 2) Vitrisols, soils of deserts, which are divided into Cambic Vitrisols, Gravelly Vitrisols, Arenic Vitrisols and Pumice Vitrisols iii) Histosols, and iv) other soil types such as Cryosols and Leptosols. The classification system is in part based on WRB system and Soil Taxonomy and earlier work by Bj\u00f6rn J\u00f3hannesson and \u00deorsteinn Gu\u00f0mundsson (see English Summary and 1. table in http://www.moldin.net/uploads/3/9/3/3/39332633/jardvegskort_2.pdf).  The map is in a coarse scale (1:500 000) and is not intended to use for particular points on the landscape.  It is rather an overview.  It has been incorporated into the EU soil database and the Circumpolar soil map.", "formats": [{"name": "WFS_SRVC"}], "keywords": ["gsl", "inspire", "is", "jarvegsflokkun", "jar\u00f0vegskort", "jar\u00f0vegur", "soil", "soil-map"], "contacts": [{"organization": "Landb\u00fana\u00f0arh\u00e1sk\u00f3li \u00cdslands", "roles": ["creator"]}]}, "links": [{"href": "https://gis.is/geoserver/lbhi/wfs?service=wfs&request=getcapabilities&version=1.1.0"}, {"href": "https://gis.is/geoserver/lbhi/wms?service=wms&request=getcapabilities"}, {"href": "http://data.europa.eu/88u/dataset/-15d66dac-a389-4330-94c5-31b2ef12f9b6-"}, {"rel": "self", "type": "application/geo+json", "title": "-15d66dac-a389-4330-94c5-31b2ef12f9b6-", "name": "item", "description": "-15d66dac-a389-4330-94c5-31b2ef12f9b6-", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/-15d66dac-a389-4330-94c5-31b2ef12f9b6-"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"null": "date"}}, {"id": "1854/LU-8746428", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:25:01Z", "type": "Journal Article", "created": "2022-01-16", "title": "Clustering and Smoothing Pipeline for Management Zone Delineation Using Proximal and Remote Sensing", "description": "<?xml version='1.0' encoding='UTF-8'?><article><p>In precision agriculture (PA) practices, the accurate delineation of management zones (MZs), with each zone having similar characteristics, is essential for map-based variable rate application of farming inputs. However, there is no consensus on an optimal clustering algorithm and the input data format. In this paper, we evaluated the performances of five clustering algorithms including k-means, fuzzy C-means (FCM), hierarchical, mean shift, and density-based spatial clustering of applications with noise (DBSCAN) in different scenarios and assessed the impacts of input data format and feature selection on MZ delineation quality. We used key soil fertility attributes (moisture content (MC), organic carbon (OC), calcium (Ca), cation exchange capacity (CEC), exchangeable potassium (K), magnesium (Mg), sodium (Na), exchangeable phosphorous (P), and pH) collected with an online visible and near-infrared (vis-NIR) spectrometer along with Sentinel2 and yield data of five commercial fields in Belgium. We demonstrated that k-means is the optimal clustering method for MZ delineation, and the input data should be normalized (range normalization). Feature selection was also shown to be positively effective. Furthermore, we proposed an algorithm based on DBSCAN for smoothing the MZs maps to allow smooth actuating during variable rate application by agricultural machinery. Finally, the whole process of MZ delineation was integrated in a clustering and smoothing pipeline (CaSP), which automatically performs the following steps sequentially: (1) range normalization, (2) feature selection based on cross-correlation analysis, (3) k-means clustering, and (4) smoothing. It is recommended to adopt the developed platform for automatic MZ delineation for variable rate applications of farming inputs.</p></article>", "keywords": ["Agriculture and Food Sciences", "2. Zero hunger", "Spatial Analysis", "precision agriculture", "ACCURACY", "Chemical technology", "management zone delineation", "TP1-1185", "04 agricultural and veterinary sciences", "15. Life on land", "Article", "VARIABILITY", "Soil", "YIELD", "FUSION", "feature selection", "ATTRIBUTES", "clustering; feature selection; management zone delineation; precision agriculture", "Remote Sensing Technology", "Cluster Analysis", "0401 agriculture", " forestry", " and fisheries", "FIELD", "SOIL-PHOSPHORUS", "Algorithms", "clustering"]}, "links": [{"href": "http://www.mdpi.com/1424-8220/22/2/645/pdf"}, {"href": "https://www.mdpi.com/1424-8220/22/2/645/pdf"}, {"href": "https://doi.org/1854/LU-8746428"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Sensors", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1854/LU-8746428", "name": "item", "description": "1854/LU-8746428", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1854/LU-8746428"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-14T00:00:00Z"}}, {"id": "1871.1/c35ee736-19df-4416-b656-7db73f2fbc01", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:25:02Z", "type": "Journal Article", "created": "2025-04-02", "title": "Effects of biodegradable microplastics on soil microbial communities and activities: Insight from an ecological mesocosm experiment", "description": "Microplastics (MP) are being released into the environment at an increasing rate, causing extensive pollution in soils and affecting biota and processes. Although the use of biodegradable plastic has increased, its effects on the soil microbial community are not yet well understood. A controlled mesocosm experiment was conducted to investigate the response of soil microbial communities to increasing amounts of starch-polybutylene adipate terephthalate MPs (PBAT-BD-MPs) added to the soil. The experiment included microbes, earthworms, springtails, and plants. The PBAT-BD-MPs were added to the soil column at doses ranging from 0 to 0.8\u00a0% w/w of soil dry mass, and the columns were incubated for 11\u00a0weeks under controlled climatic conditions. Bacterial and fungal amplicon sequencing was used to investigate the dose-dependent response of the soil microbial communities' alpha and beta diversity. The alpha diversity indices of the bacterial and fungal communities increased with increasing PBAT-BD-MP concentration. Bacterial richness was highest at the highest MP concentration (0.8\u00a0%). A similar trend was observed in the fungal community, with a significant increase in fungal richness as PBAT-BD-MP concentration increased. The alpha diversity of both bacterial and fungal communities significantly increased in MP treatments compared to the control treatment. At the highest MP concentration (0.8\u00a0%), the abundance of the bacterial phylum Planctomycetes showed a significant increase, while Firmicutes showed a significant decrease. The abundance of the fungal phyla Ascomycota and Mortierellomycota also significantly increased at the highest PBAT-BD-MP concentration compared to the control group. Alongside changes in the soil microbial community, we observed a rise in soil respiration as the concentration of PBAT-BD-MPs increased. Our three-month mesocosm study demonstrates that the introduction of biodegradable microplastics into the natural standard soil environment in realistic concentrations (0-0.025-0.05-0.2-0.8\u00a0%) and particle size distribution alters the soil bacterial and fungal community.", "keywords": ["Polybutylene adipate terephthalate PBAT", "Biodegradation", " Environmental", "CLIMECS", "Bacteria", "Microplastics", "Microbiota", "Fungi", "Soil Pollutants", "Animals", "Soil respiration", "Biodegradable Plastics", "Oligochaeta", "Soil Microbiology"]}, "links": [{"href": "https://doi.org/1871.1/c35ee736-19df-4416-b656-7db73f2fbc01"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Science%20of%20The%20Total%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "1871.1/c35ee736-19df-4416-b656-7db73f2fbc01", "name": "item", "description": "1871.1/c35ee736-19df-4416-b656-7db73f2fbc01", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/1871.1/c35ee736-19df-4416-b656-7db73f2fbc01"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-01T00:00:00Z"}}, {"id": "10.5061/dryad.f542t16", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:29Z", "type": "Dataset", "title": "Data from: Grazing and resource availability control soil nematode body size and abundance-mass relationship in semi-arid grassland", "description": "unspecified1. Body size is a central functional trait in ecological communities.  Despite recognition of the importance of above-belowground interactions,  effects of aboveground herbivores on size and abundance-size relationships  in soil fauna are almost uncharted. Depending on climate and soil  properties, herbivores may increase basal resources of soil food webs, or  reduce pore space, mechanisms expected to have contrasting effects on soil  animal body size. 2. We investigated how body size and shape of soil  nematodes responded to mammalian grazers in three semi-arid grassland  sites, along a gradient of soil texture and organic matter (OM) in a  long-term herbivore removal study. We analysed nematode mass, length,  diameter, body size distribution, and biomass distribution. We formulated  two mechanistic hypotheses to assess whether resource availability or pore  space was the dominant abiotic control and modulated the effects of  grazing. 3. In ungrazed soils, average and maximum nematode size, as well  as abundance and biomass of large nematodes, were greater in the high-OM  than in the low-OM soil, and intermediate in the medium-OM soil. Grazing  promoted larger sizes in the low-OM soil, where it had been shown to  increase organic matter and microbial biomass, and led to more homogeneous  average size and body size distribution across sites. The results support  the hypothesis that nematode size was controlled by basal resource  availability rather than by pore space. However, body shape might have  been constrained by small pores in the fine-texture, high-OM soil, where  nematodes were more elongated. 4. Grazing may facilitate larger sizes in  soil nematode communities by boosting basal resources where these are  limiting, with important implications for estimations of nematode biomass  and contribution to carbon and nutrient cycling. These findings contribute  to the insofar-limited mechanistic understanding of how herbivores can  shape functional traits of soil fauna, and demonstrate that animals at one  trophic level may control patterns in body size and abundance-size  relationships in other trophic levels without a direct predator-prey or  competitive linkage between them.", "keywords": ["2. Zero hunger", "Individual size distribution", "Soil texture", "Aboveground-belowground interactions", "15. Life on land", "Mammalian herbivores", "organic matter", "Soil fauna"], "contacts": [{"organization": "Andriuzzi, Walter S., Wall, Diana H.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.f542t16"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.f542t16", "name": "item", "description": "10.5061/dryad.f542t16", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.f542t16"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-05-17T00:00:00Z"}}, {"id": "10.1002/ldr.2158", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:14:19Z", "type": "Journal Article", "created": "2012-04-03", "title": "Changes in soil organic carbon under eucalyptus plantations in brazil: a comparative analysis", "description": "ABSTRACT<p>Proper assessment of environmental quality or degradation requires knowledge of how terrestrial C pools respond to land use change. Forest plantations offer a considerable potential to sequester C in aboveground biomass. However, their impact on initial levels of soil organic carbon (SOC) varies from strong losses to gains, possibly affecting C balances in afforestation or reforestation initiatives. We compiled paired\uffe2\uff80\uff90plot studies on how SOC stocks under native vegetation change after planting fast\uffe2\uff80\uff90growth Eucalyptus species in Brazil, where these plantations are becoming increasingly important. SOC changes for the 0\uffe2\uff80\uff9320 and 0\uffe2\uff80\uff9340\uffe2\uff80\uff89cm depths varied between \uffe2\uff88\uff9225 and 42\uffe2\uff80\uff89Mg\uffe2\uff80\uff89ha\uffe2\uff88\uff921, following a normal distribution centered near zero. After replacing native vegetation by Eucalyptus plantations, mean SOC changes were \uffe2\uff88\uff921\uffc2\uffb75 and 0\uffc2\uffb73\uffe2\uff80\uff89Mg\uffe2\uff80\uff89ha\uffe2\uff88\uff921 for the 0\uffe2\uff80\uff9320 and 0\uffe2\uff80\uff9340\uffe2\uff80\uff89cm depths, respectively. These are very low figures in comparison to C stocks usually sequestered in aboveground biomass and were statistically nonsignificant as demonstrated by a t\uffe2\uff80\uff90test at p\uffe2\uff80\uff89&lt;\uffe2\uff80\uff890\uffc2\uffb705. Similar low, nonsignificant SOC changes were estimated after data were stratified into first or second rotation cycles, soil texture and biome (savanna, rainforest or grassland). Although strong SOC losses or gains effectively occurred in some cases, their underpinning causes could not be generally identified in the present work and must be ascribed in a case basis, considering the full set of environmental and management conditions. We conclude that Eucalyptus spp. plantations in average have no net effect on SOC stocks in Brazil. Copyright \uffc2\uffa9 2012 John Wiley &amp; Sons, Ltd.</p>", "keywords": ["Soil organic matter", "Carbon stocks", "Tropical soils", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Fast-growth tree plantations", "Land use change"]}, "links": [{"href": "https://doi.org/10.1002/ldr.2158"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Land%20Degradation%20%26amp%3B%20Development", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1002/ldr.2158", "name": "item", "description": "10.1002/ldr.2158", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1002/ldr.2158"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-04-03T00:00:00Z"}}, {"id": "10.1016/j.agee.2024.109035", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:15:34Z", "type": "Journal Article", "created": "2024-05-04", "title": "Soil and climatic characteristics and farming system shape fungal communities in European wheat fields", "description": "Fungi play a pivotal role as highly effective decomposers of plant residues and essential mycorrhizal symbionts,\u00a0augmenting water and nutrient uptake in plants and contributing to diverse functions within agroecosystems.\u00a0This study examined soil fungi in 188 wheat fields across nine European pedoclimatic zones under both conventional\u00a0and organic farming systems, utilizing ITS1 amplicon sequencing. The investigation aimed to quantify\u00a0changes induced by the farming system in soil fungi and their correlation with soil features and climatic factors\u00a0across these pedoclimatic zones, spanning from northern to southern Europe. The pedoclimatic zone emerged as\u00a0a key determinant in shaping the overall composition of the fungal community. Zones characterized by moist and\u00a0cool climates, along with low levels of available phosphorus and carbonate, exhibited higher fungal richness.\u00a0However, variations in fungal diversity and relative abundances were observed within zones due to farming\u00a0system-induced changes. Soil pH and bulk density were identified as major factors, for example, they correlate\u00a0with an increase in potential pathogenic taxa (Mycosphaerella, Nectriaceae, Alternaria) in two Mediterranean\u00a0zones and with an increase of potential plant growth promoting taxa (Saitozyma, Solicoccozyma) in the Boreal\u00a0zone. Organic farming, in general, promoted elevated fungal richness. The Lusitanian and Nemoral zones under\u00a0organic farming exhibited the highest fungal richness and diversity. In terms of organic farming, both symbiotrophs\u00a0and potential pathogens increased in the Lusitanian zone, while pathotrophs were more prevalent in the\u00a0Central Atlantic and South Mediterranean zones under organic farming. These findings propose potential indicators\u00a0for organic farming, including fungal endophytes in zones characterized by a moist and cool climate, low\u00a0available phosphorus content, and low soil pH. Organic farming may favor mycorrhizae and potential pathogens\u00a0in zones with drier and warmer climates, along with higher soil pH, calcium carbonate content, and bulk density.\u00a0This study provides novel insights and underscores the significance of regional climatic and edaphic conditions in\u00a0shaping the soil fungal community in different farming systems within European wheat fields.  This work was funded by the European Commission Horizon 2020 project SoildiverAgro [grant agreement 817819].", "keywords": ["2. Zero hunger", "570", "Organic farming", "15. Life on land", "630", "conventional farming", "wheat field", "Conventional farming", "organic farming", "Agricultural soils", "farming system", "fungi", "Fungal diversity"]}, "links": [{"href": "https://doi.org/10.1016/j.agee.2024.109035"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agriculture%2C%20Ecosystems%20%26amp%3B%20Environment", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.agee.2024.109035", "name": "item", "description": "10.1016/j.agee.2024.109035", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.agee.2024.109035"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-01T00:00:00Z"}}, {"id": "10.1016/j.apsoil.2014.12.005", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:15:43Z", "type": "Journal Article", "created": "2015-01-16", "title": "Short-Term Mesofauna Responses To Soil Additions Of Corn Stover Biochar And The Role Of Microbial Biomass", "description": "Biochar additions have been suggested to influence soil microbial communities that, through a cascade effect, may also impact soil fauna. In turn, any direct biochar effects on fauna can influence microbial communities through grazing, physical fragmentation of organic debris (and biochar) and modifying soil structure. If biochar creates a favorable environment for soil microorganisms, it is also plausible for fauna to be attracted to such microbially enriched habitats. However, how soil fauna respond to biochar addition to soil and what are the main factors that drive their behavior has rarely been experimentally addressed. Therefore, the behavior of two mesofauna species was assessed as a result of corn stover biochar (slow pyrolysis at 600 \u00b0C) additions to a loamy temperate soil, after preincubation for 2, 17, 31 and 61 d, and related to variations in microbial biomass and activity. Microbial biomass increased by 5-56% and activity by 6-156% with increasing biochar rates for the different preincubation times. Over the incubation time, microbial biomass did not change or increased at most 15% with the different biochar rates, while in turn microbial activity decreased steadily (around 70-80% at day 61). Enchytraeids generally did not show avoidance or preference to biochar when provided with an alternative unamended soil, while collembolans often showed avoidance responses. However, collembolan avoidance to biochar decreased or disappeared in biochar mixtures with higher microbial biomass and water extractable NH4-N content, agreeing with the plausible role of microorganisms to potentially attract soil fauna after biochar applications. Avoidance response was mainly explained by environmental preferences of the test species and not by any toxic effect of the biochar in this study. However, avoidance after the application of biochar may still need to be considered due to the potential negative impacts of individuals' migration on soil ecosystem functioning.", "keywords": ["2. Zero hunger", "Biochar", "Behavior", "Avoidance", "Microbial biomass", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Ammonium", "Soil fauna"]}, "links": [{"href": "https://doi.org/10.1016/j.apsoil.2014.12.005"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20Soil%20Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.apsoil.2014.12.005", "name": "item", "description": "10.1016/j.apsoil.2014.12.005", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.apsoil.2014.12.005"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-05-01T00:00:00Z"}}, {"id": "10.1016/j.geoderma.2012.01.032", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:16:24Z", "type": "Journal Article", "created": "2012-03-06", "title": "Characterization Of Wildfire Effects On Soil Organic Matter Using Analytical Pyrolysis", "description": "Open AccessPeer reviewed", "keywords": ["Soil organic matter", "Central Portugal", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "Wildfire", "15. Life on land", "Py-GC/MS", "Eucalypt", "Pine", "Wildfires"]}, "links": [{"href": "https://doi.org/10.1016/j.geoderma.2012.01.032"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Geoderma", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1016/j.geoderma.2012.01.032", "name": "item", "description": "10.1016/j.geoderma.2012.01.032", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1016/j.geoderma.2012.01.032"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-12-01T00:00:00Z"}}, {"id": "10.1111/j.1365-2486.2009.02044.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:18:51Z", "type": "Journal Article", "created": "2009-08-03", "title": "Fate Of Soil-Applied Black Carbon: Downward Migration, Leaching And Soil Respiration", "description": "Abstract<p>Black carbon (BC) is an important pool of the global C cycle, because it cycles much more slowly than others and may even be managed for C sequestration. Using stable isotope techniques, we investigated the fate of BC applied to a savanna Oxisol in Colombia at rates of 0, 11.6, 23.2 and 116.1\uffe2\uff80\uff83t\uffe2\uff80\uff83BC\uffe2\uff80\uff83ha\uffe2\uff88\uff921, as well as its effect on non\uffe2\uff80\uff90BC soil organic C. During the rainy seasons of 2005 and 2006, soil respiration was measured using soda lime traps, particulate and dissolved organic C (POC and DOC) moving by saturated flow was sampled continuously at 0.15 and 0.3\uffe2\uff80\uff83m, and soil was sampled to 2.0\uffe2\uff80\uff83m. Black C was found below the application depth of 0\uffe2\uff80\uff930.1\uffe2\uff80\uff83m in the 0.15\uffe2\uff80\uff930.3\uffe2\uff80\uff83m depth interval, with migration rates of 52.4\uffc2\uffb114.5, 51.8\uffc2\uffb118.5 and 378.7\uffc2\uffb1196.9\uffe2\uff80\uff83kg\uffe2\uff80\uff83C\uffe2\uff80\uff83ha\uffe2\uff88\uff921\uffe2\uff80\uff83yr\uffe2\uff88\uff921 (\uffc2\uffb1SE) where 11.6, 23.2 and 116.1\uffe2\uff80\uff83t\uffe2\uff80\uff83BC\uffe2\uff80\uff83ha\uffe2\uff88\uff921, respectively, had been applied. Over 2 years after application, 2.2% of BC applied at 23.2\uffe2\uff80\uff83t\uffe2\uff80\uff83BC\uffe2\uff80\uff83ha\uffe2\uff88\uff921 was lost by respiration, and an even smaller fraction of 1% was mobilized by percolating water. Carbon from BC moved to a greater extent as DOC than POC. The largest flux of BC from the field (20\uffe2\uff80\uff9353% of applied BC) was not accounted for by our measurements and is assumed to have occurred by surface runoff during intense rain events. Black C caused a 189% increase in aboveground biomass production measured 5 months after application (2.4\uffe2\uff80\uff934.5\uffe2\uff80\uff83t additional dry biomass\uffe2\uff80\uff83ha\uffe2\uff88\uff921 where BC was applied), and this resulted in greater amounts of non\uffe2\uff80\uff90BC being respired, leached and found in soil for the duration of the experiment. These increases can be quantitatively explained by estimates of greater belowground net primary productivity with BC addition.</p>", "keywords": ["2. Zero hunger", "leaching", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "ecology", "15. Life on land", "soil respiration", "respiraci\u00f3n del suelo", "01 natural sciences", "lixiviacion", "6. Clean water", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2009.02044.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2009.02044.x", "name": "item", "description": "10.1111/j.1365-2486.2009.02044.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2009.02044.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-02-22T00:00:00Z"}}], "links": [{"rel": "self", "type": "application/geo+json", "title": "This document as GeoJSON", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=soil&f=json", "hreflang": "en-US"}, {"rel": "alternate", "type": "text/html", "title": "This document as HTML", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=soil&f=html", "hreflang": "en-US"}, {"rel": "collection", "type": "application/json", "title": "Collection URL", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main", "hreflang": "en-US"}, {"type": "application/geo+json", "rel": "first", "title": "items (first)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=soil&", "hreflang": "en-US"}, {"rel": "next", "type": "application/geo+json", "title": "items (next)", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items?keywords=soil&offset=50", "hreflang": "en-US"}], "numberMatched": 10412, "numberReturned": 50, "distributedFeatures": [], "timeStamp": "2026-05-02T08:27:40.602038Z"}