{"type": "FeatureCollection", "features": [{"id": "10.1111/j.1365-2486.2009.02121.x", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:18:51Z", "type": "Journal Article", "created": "2009-12-22", "title": "Functional Changes In The Control Of Carbon Fluxes After 3 Years Of Increased Drought In A Mediterranean Evergreen Forest?", "description": "Abstract

Our objective was to test how a long\uffe2\uff80\uff90term increased water limitation affects structural and functional properties of a Mediterranean ecosystem, and how these changes modify the response of the main carbon fluxes to climatic controls. In 2003, a 27% throughfall exclusion experiment was installed in a Quercus ilex L. forest in France. Gross primary production (GPP), ecosystem respiration (RECO) and net ecosystem exchange (NEE) were estimated in a control and a dry treatment. Decreasing throughfall decreased GPP by 14% and had a smaller effect on RECO (\uffe2\uff88\uff9212%), especially soil respiration RS (\uffe2\uff88\uff9211%). Interannual variability of GPP (29%) was higher than for RECO (12%). Error propagation was used to estimates uncertainties in the NEE fluxes, which ranged from 3% to 10% in the control treatment but up to 167% for NEE in the dry treatment because more steps and data types were involved in the scaling. After 3 years of throughfall exclusion, we found no acclimation of RS to climatic drivers. Functional properties of the response of RS to soil water, temperature and rain pulse remained similar in the control and the dry treatments. A diurnal clockwise hysteresis in RS was probably controlled by canopy photosynthesis with a 3\uffe2\uff80\uff83h lag. The proportion of diurnal variation of respiration due to photosynthesis was similar in all treatments (4\uffe2\uff80\uff935%). Because of the characteristic of rain in Mediterranean climates, a continuous decrease of water input in these environments have an effect on topsoil water and consequently on RS only during short periods when rainfall is characterized by infrequent and small events that does not allow the topsoil to reach field capacity and does not allow to dry completely. However, in the longer term, we expect a stronger decrease in RS in the dry treatment driven by the decrease in GPP.

", "keywords": ["0106 biological sciences", "550", "15. Life on land", "gross primary production", "soil respiration", "01 natural sciences", "630", "6. Clean water", "Quercus ilex", "throughfall exclusion", "13. Climate action", "rain pulse", "eddy-covariance", "Q(10)", "error propagation", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.1111/j.1365-2486.2009.02121.x"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Global%20Change%20Biology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/j.1365-2486.2009.02121.x", "name": "item", "description": "10.1111/j.1365-2486.2009.02121.x", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/j.1365-2486.2009.02121.x"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-08-01T00:00:00Z"}}, {"id": "10.1111/sum.12198", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:06Z", "type": "Journal Article", "created": "2015-07-31", "title": "Long-Term Effects Of Tillage, Nutrient Application And Crop Rotation On Soil Organic Matter Quality Assessed By Nmr Spectroscopy", "description": "Abstract

Crop and land management practices affect both the quality and quantity of soil organic matter (SOM) and hence are driving forces for soil organic carbon (SOC) sequestration. The objective of this study was to assess the long\uffe2\uff80\uff90term effects of tillage, fertilizer application and crop rotation onSOCin an agricultural area of southern Norway, where a soil fertility and crop rotation experiment was initiated in 1953 and a second experiment on tillage practices was initiated in 1983. The first experiment comprised 6\uffe2\uff80\uff90yr crop rotations with cereals only and 2\uffe2\uff80\uff90yr cereal and 4\uffe2\uff80\uff90yr grass rotations with recommended (base) and more than the recommended (above base) fertilizer application rates; the second experiment dealt with autumn\uffe2\uff80\uff90ploughed (conventional\uffe2\uff80\uff90till) plots and direct\uffe2\uff80\uff90drilled plots (no\uffe2\uff80\uff90till). Soil samples at 0\uffe2\uff80\uff9310 and 10\uffe2\uff80\uff9330\uffc2\uffa0cm depths were collected in autumn 2009 and analysed for their C and N contents. The quality ofSOMin the top layer was determined by13C solid\uffe2\uff80\uff90stateNMRspectroscopy. TheSOCstock did not differ significantly because of rotation or fertilizer application types, even after 56\uffc2\uffa0yr. However, the no\uffe2\uff80\uff90till system showed a significantly higherSOCstock than the conventional\uffe2\uff80\uff90till system at the 0\uffe2\uff80\uff9310\uffc2\uffa0cm depth after the 26\uffc2\uffa0yr of experiment, but it was not significantly different at the 10\uffe2\uff80\uff9330\uffc2\uffa0cm depth. In terms of quality,SOMwas found to differ by tillage type, rate of fertilizer application and crop rotation. The no\uffe2\uff80\uff90till system showed an abundance of O\uffe2\uff80\uff90alkyl C, while conventional\uffe2\uff80\uff90till system indicated an apparently indirect enrichment in alkyl C, suggesting a more advanced stage ofSOMdecomposition. The long\uffe2\uff80\uff90term quantitative and qualitative effects onSOMsuggest that adopting a no\uffe2\uff80\uff90tillage system and including grass in crop rotation and farmyard manure in fertilizer application may contribute to preserve soil fertility and mitigate climate change.

", "keywords": ["Fertilizer application", "2. Zero hunger", "Crop rotation", " fertilizer application", " soil organic carbon (SOC)", " soil organic matter (SOM)", " tillage", " NMR spectroscopy.", "NMR spectroscopy", "Crop rotation", "Soil organic matter (SOM)", "13. Climate action", "Soil organic carbon (SOC)", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "Tillage"]}, "links": [{"href": "https://doi.org/10.1111/sum.12198"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Use%20and%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1111/sum.12198", "name": "item", "description": "10.1111/sum.12198", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1111/sum.12198"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2015-07-31T00:00:00Z"}}, {"id": "10.1128/aem.02264-23", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:10Z", "type": "Journal Article", "created": "2024-02-19", "title": "Novel endolithic bacteria of phylum Chloroflexota reveal a myriad of potential survival strategies in the Antarctic desert", "description": "ABSTRACT

The ice-free McMurdo Dry Valleys of Antarctica are dominated by nutrient-poor mineral soil and rocky outcrops. The principal habitat for microorganisms is within rocks (endolithic). In this environment, microorganisms are provided with protection against sub-zero temperatures, rapid thermal fluctuations, extreme dryness, and ultraviolet and solar radiation. Endolithic communities include lichen, algae, fungi, and a diverse array of bacteria. Chloroflexota is among the most abundant bacterial phyla present in these communities. Among the Chloroflexota are four novel classes of bacteria, here named Candidatus Spiritibacteria class. nov. (=UBA5177), Candidatus Martimicrobia class. nov. (=UBA4733), Candidatus Tarhunnaeia class. nov. (=UBA6077), and Candidatus Uliximicrobia class. nov. (=UBA2235). We retrieved 17 high-quality metagenome-assembled genomes (MAGs) that represent these four classes. Based on genome predictions, all these bacteria are inferred to be aerobic heterotrophs that encode enzymes for the catabolism of diverse sugars. These and other organic substrates are likely derived from lichen, algae, and fungi, as metabolites (including photosynthate), cell wall components, and extracellular matrix components. The majority of MAGs encode the capacity for trace gas oxidation using high-affinity uptake hydrogenases, which could provide energy and metabolic water required for survival and persistence. Furthermore, some MAGs encode the capacity to couple the energy generated from H 2 and CO oxidation to support carbon fixation (atmospheric chemosynthesis). All encode mechanisms for the detoxification and efflux of heavy metals. Certain MAGs encode features that indicate possible interactions with other organisms, such as Tc-type toxin complexes, hemolysins, and macroglobulins.

IMPORTANCE

The ice-free McMurdo Dry Valleys of Antarctica are the coldest and most hyperarid desert on Earth. It is, therefore, the closest analog to the surface of the planet Mars. Bacteria and other microorganisms survive by inhabiting airspaces within rocks (endolithic). We identify four novel classes of phylum Chloroflexota , and, based on interrogation of 17 metagenome-assembled genomes, we predict specific metabolic and physiological adaptations that facilitate the survival of these bacteria in this harsh environment\uffe2\uff80\uff94including oxidation of trace gases and the utilization of nutrients (including sugars) derived from lichen, algae, and fungi. We propose that such adaptations allow these endolithic bacteria to eke out an existence in this cold and extremely dry habitat.

", "keywords": ["570", "Bacteria", "Fungi", "Antarctic Regions", "Chloroflexi", "15. Life on land", "Survival strategies", "Cold Temperature", "Extremophiles", "13. Climate action", "Antarctica", "Endolithic communities", "Metagenomics", "14. Life underwater", "Sugars", "Settore BIO/19 - MICROBIOLOGIA GENERALE"]}, "links": [{"href": "https://doi.org/10.1128/aem.02264-23"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Applied%20and%20Environmental%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1128/aem.02264-23", "name": "item", "description": "10.1128/aem.02264-23", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1128/aem.02264-23"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-02-19T00:00:00Z"}}, {"id": "10.1128/cmr.00196-24", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:10Z", "type": "Journal Article", "created": "2025-07-08", "title": "Schistosomiasis: cercarial finding and recognizing of human hosts as a prerequisite of invasion", "description": "SUMMARY

Schistosomiasis occurs in 80 primarily tropical and subtropical countries. It is transmitted to humans and animals by Schistosoma cercariae during freshwater contact. Parasite stages adapt and switch between molluscs, water, and mammals, where worms sustain parasitism. We reviewed research on larvae encountering humans published in PubMed, Embase, and Web of Science until May 2024. Larvae perform intermittent active/tail-first and passive/body-first swimming with arc-like re-encountering upon host approaches. Skin contacts occur spontaneously or through stimulants. Schistosoma mansoni , expressing chemokinesis, lingers in upper-middle warm clear water. Schistosoma haematobium , showing negative photo-orientation, remains in upper-lower, cooler, clear-muddy freshwater. Schistosoma japonicum stays stimuli-wise non-responsive in shallow muddy habitats. Attachment triggers of S. mansoni and S. haematobium are amino acids and temperature, respectively. S. japonicum adheres at random. Temperature gradient, ceramides, and acylglycerols stimulate the epidermal remaining of S. mansoni ; solid hydrophobic surfaces trigger S. haematobium and S. japonicum . Temperatures of \uffe2\uff89\uffa536\uffc2\uffb0C, \uffe2\uff89\uffa540\uffc2\uffb0C, and 37\uffc2\uffb0C guide S. mansoni , S. haematobium , and S. japonicum creeping for entering. Permeation aligns with schistosomula transformation by glycocalyx removal, heptalaminate membrane conversion, and tail stripping off and advances mechanically and enzymatically through acetabular glands. Skin and bloodstream navigation follows increasing L-arginine and D-glucose and parasite adjustment ventral-wards. Head gland enzymes facilitate epidermal-dermal transitioning for cutaneous exiting and vasculature accessing. Skin responds with anti-parasitic, anti-inflammatory edematous infiltrations. Schistosoma reacts by evasion through hormones, neurotransmitters, enzymes, and specialized proteins, among others. The findings, building largely on in vitro experiments, aim to facilitate the development of field-suitable prevention and control measures in support of the World Health Organization 2021\uffe2\uff80\uff932030 Roadmap on Neglected Tropical Diseases. We used a 72-year chronosequence to study the loss and recovery of ecosystem C pools following stand-replacing wildfire in Michigan, USA, jack pine (Pinus banksiana Lamb.) forests. We quantified the amount of C stored in aboveground plant biomass, standing dead timber, downed dead wood, surface organic soil, and mineral soil in 11 jack pine stands that had burned between 1 and 72 years previously. Total ecosystem C ranged from a low of 59 Mg C\uffc2\uffb7ha–1 in the 4-year-old stand to 110 Mg C\uffc2\uffb7ha–1 in the 72-year-old stand. Changes in total ecosystem C across the chronosequence conformed to theoretical predictions, in which C stocks declined initially as decomposition of dead wood and forest-floor C exceeded production by regenerating vegetation, and then increased asymptotically with the development of a new stand of jack pine. This pattern was well described by the following 'gamma' function: total ecosystem C (Mg\uffc2\uffb7ha–1) = 112.2 – 39.6 \uffc3\uff97 age0.351 \uffc3\uff97 exp(–0.053 \uffc3\uff97 age01.039); mean-corrected R2 = 0.976. Using the first derivative of this parameterized gamma function, we estimated that jack pine stands function as a weak source of C to the atmosphere for only ca. 6 years following wildfire, and reach a maximum net ecosystem productivity of 1.6 Mg C\uffc2\uffb7ha–1\uffc2\uffb7year–1 by year 16. We attribute the rapid transition from carbon source to carbon sink in these ecosystems to two factors: (i) stand-replacing wildfires in these xeric forests leave behind little respirable substrate in surface organic horizons, and (ii) jack pine is able to rapidly reestablish following wildfires via serotinous cones. Jack pine stands remained net sinks for C across the chronosequence; however, net ecosystem productivity had declined to 0.12 C ha–1\uffc2\uffb7year–1 by year 72. Carbon sequestration by mature jack pine ecosystems was driven primarily by continued growth of overstory jack pine, not by accumulation of detrital C.

", "keywords": ["0106 biological sciences", "13. Climate action", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"]}, "links": [{"href": "https://doi.org/10.1139/x04-063"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Canadian%20Journal%20of%20Forest%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1139/x04-063", "name": "item", "description": "10.1139/x04-063", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1139/x04-063"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2004-09-01T00:00:00Z"}}, {"id": "10.1139/x93-128", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:15Z", "type": "Journal Article", "created": "2007-07-20", "title": "Effects Of Selected Forest Management-Practices On Environmental Parameters Related To Successional Development On The Tanana River Floodplain, Interior Alaska", "description": "

Two mature floodplain white spruce (Piceaglauca (Moench) Voss) ecosystems (stage VIII) located on islands in the Tanana River, approximately 20\uffe2\uff80\uff82km southwest of Fairbanks, Alaska, were clear-cut during the winter of 1985\uffe2\uff80\uff931986 to quantify the effects of clear-cutting on selected environmental characteristics. Clearings in earlier successional stages (poplar\uffe2\uff80\uff93alder (Populus\uffe2\uff80\uff93Alnus), stage V; and open willow (Salix), stage III) were used to contrast the environmental parameters with the earlier stages found in the primary successional sequence. After clear-cutting, total radiation at the soil surface increased to early successional stage III levels. Potential evaporation from the soil surface increased 5-fold as a result of clearing in the stage VIII sites and was substantially greater than that found in the stage III sites by other researchers. Clearing had relatively little effect on air temperature. The concentration of P and K was significantly lower in the forest floor of both clearcuts, and the concentration of C was significantly higher at VIII-A-T (stage VIII\uffe2\uff80\uff93site A\uffe2\uff80\uff93treated (cleared) plot) when compared with the control stands. There was a decrease in total forest floor biomass at both clear-cut plots. Organic matter, total N, available NH4 and P, and extractable Mg and K all decreased after cutting, whereas pH increased. Decomposition of spruce foliage on the forest floor surface was slower in the clearcuts. Nitrogen immobilization occurred during the first 2 years of decomposition. During the third year it appeared that some mineralization was beginning to occur but the levels were very low, averaging only 3\uffe2\uff80\uff82mg N per bag in the clear-cut areas. Plant growth analysis indicated that growth was limited by high mineral soil salt content in the early successional stages (III) and that this limitation was species specific. Balsam poplar (Populusbalsamifera L.) appears to be more tolerant of the high cation content of the stage III sites compared with trembling aspen (Populustremuloides Michx.). By the time successional development has progressed to stage V, the soil has been sufficiently augmented by the inclusion of organic matter from the developing vegetation and the fixation of N by alder to result in higher seedling growth rates in the cleared areas.

", "keywords": ["0106 biological sciences", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "John Yarie", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1139/x93-128"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Canadian%20Journal%20of%20Forest%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1139/x93-128", "name": "item", "description": "10.1139/x93-128", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1139/x93-128"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1993-05-01T00:00:00Z"}}, {"id": "10.11591/.v3i4.4696", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:17Z", "type": "Journal Article", "created": "2019-11-04", "title": "Factors associated with Institutional delivery in Boricha district of Sidama zone, southern Ethiopia", "description": "

<p style='color: #000000; font-family: Verdana, Arial, Helvetica, sans-serif; font-size: 10px; font-style: normal; font-variant-ligatures: normal; font-variant-caps: normal; font-weight: 400; letter-spacing: normal; orphans: 2; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration-style: initial; text-decoration-color: initial;'>Every year, 40 million women give birth at home without the help of a<br />skilled birth attendant. In 2011, 287,000 women died during pregnancy or childbirth. Almost all these deaths occur in developing countries where mothers and children lack access to basic health care. Reports showed the low utilization of health facility for delivery service in Ethiopia. This study aimed to determine the utilization and factors influencing institutional delivery. Community based cross sectional study was conducted from January to February 2013/14 in Boricha District of Southern Ethiopia among mothers who gave birth in the last 1 year. Multistage sampling techniques were used to collect data from 546 mothers. Taking in to account place of birth for the last child, only 4.9% women gave birth in a health facility. Women\u2019s education level (AOR=4.4 (95% CI=1.36-14.33)), timing of firstANC visit (AOR= .03 (95% CI=0.004 - 0.205)), women\u2019s advice to deliver in a health facility during ANC (AOR = 31.15 (95% CI=2.02-479.52)), women\u2019s knowledge of birth related complications (AOR= 12.4 (95% CI=2.67-57.16)) and decision making power (AOR=0.2 (95% CI=0.060.82)) showed significant association with institutionional delivery. Institutional delivery in the study area was found to be very low. Raising\u00a0awareness on institutional delivery to maximize delivery service utilization and strengthening provision of education and counseling to deliver in health facility during antenatal care visits at individual and community level should be given due emphasis.</p>

", "keywords": ["2. Zero hunger", "03 medical and health sciences", "0302 clinical medicine", "1. No poverty", "3. Good health"]}, "links": [{"href": "https://doi.org/10.11591/.v3i4.4696"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/International%20Journal%20of%20Public%20Health%20Science%20%28IJPHS%29", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.11591/.v3i4.4696", "name": "item", "description": "10.11591/.v3i4.4696", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.11591/.v3i4.4696"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2014-12-01T00:00:00Z"}}, {"id": "10.1175/bams-d-20-0086.1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:18Z", "type": "Journal Article", "created": "2020-08-20", "title": "Tundra greenness", "description": "Physical and Space Geodesy", "keywords": ["[SDU.STU.CL] Sciences of the Universe [physics]/Earth Sciences/Climatology", "[SDU.STU.ME] Sciences of the Universe [physics]/Earth Sciences/Meteorology", "[SDU.STU.HY] Sciences of the Universe [physics]/Earth Sciences/Hydrology", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://journals.ametsoc.org/downloadpdf/journals/bams/101/8/bamsD200086.xml"}, {"href": "https://doi.org/10.1175/bams-d-20-0086.1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Bulletin%20of%20the%20American%20Meteorological%20Society", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1175/bams-d-20-0086.1", "name": "item", "description": "10.1175/bams-d-20-0086.1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1175/bams-d-20-0086.1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-08-01T00:00:00Z"}}, {"id": "10138/578894", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:24Z", "type": "Journal Article", "created": "2024-05-31", "title": "Comparison between lower-cost and conventional eddy covariance setups for CO2 and evapotranspiration measurements above monocropping and agroforestry systems", "description": "Open AccessPeer reviewed", "keywords": ["Physical sciences", "Evapotranspiration", "Lower-cost eddy covariance", "Carbon dioxide flux", "Agroforestry", "Gas analyzer"]}, "links": [{"href": "https://doi.org/10138/578894"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Forest%20Meteorology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10138/578894", "name": "item", "description": "10138/578894", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10138/578894"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-07-01T00:00:00Z"}}, {"id": "10.15154/10ce-r351", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:33Z", "type": "Dataset", "created": "2023-10-03", "title": "Engineering of organoid-based brain circuits", "description": "The human induced pluripotent stem cell hiPSC technology promises major advances in disease modeling and personalized medicine. Using hiPSCs, organoid systems have been generated in recent years that resemble the identity of several brain regions, including cortex, basal ganglia, cerebellum and spinal cord. Major shortfalls of these models are the lack of a reproducible topography of the cell types and tissue architecture that are generated, and the failure to recapitulate the full range of cellular and molecular diversity that characterizes in vivo systems. Thus, our goal is to generate a more accurate and reproducible model for formation of human brain regions and their interactions in vitro. During early development, gradients of diffusible morphogens program cellular identity along the major dimensions of the vertebrate body, the antero-posterior A-P and dorso-ventral D-V axes, conveying positional information by inducing specific genetic programs. Recreating these morphogen gradients in vitro promises to increase the diversity of the organoids cellular repertoire and its reproducibility. We focus on two signaling cues, WNT and Sonic Hedgehog SHH, which, respectively, caudalize and ventralize the early neural tube in mammals. Nave neural organoids tend to generate dorsal forebrain if not exposed to any patterning signals, and indeed cerebral cortical CTX fate is the default identity for the nervous tissue. In Aim1, we will use specially designed mesofluidic chambers to create stable concentration gradients of the posteriorizing morphogen WNT to generate organoid identities along the A-P axis cortex-diencephalon-mesencephalon-brainstem from 10 biologically different hiPSC lines. In parallel, we will test that hiPSC exposed to a concentration gradient of SHH will generate organoids identities along the D-V axis hypothalamus- caudal- lateral-medial ganglionic eminences-cortex. Regional and cellular fates will be assessed by immunocytochemistry ICC, single cell RNASeq and DBiT-seq, a novel spatial in situ transcriptomics approach. We will then test whether morphogen-induced initial specification achieved through the methodology proposed here will result in accurate and reproducible connections by developing multi-organoid aggregates i.e., assembloids. In Aim 2, we will assemble region-specific organoids to form components of the cortico-basal ganglia-thalamo-cortical circuit. By labeling neurons with specific reporters, we will examine their projections to the adjacent regions and will test the functional activity and synaptic development of those projections using optogenetics. Generation of a series of differentially induced regions in close spatial proximity is important to allow subsequent migration and appropriate wiring of the CNS. Our approach promises to deliver a new system for modeling neuronal fate and circuitry development in humans and testing its functionality on the cellular, molecular and genomic level.", "contacts": [{"organization": "Vaccarino, Flora", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.15154/10ce-r351"}, {"rel": "self", "type": "application/geo+json", "title": "10.15154/10ce-r351", "name": "item", "description": "10.15154/10ce-r351", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.15154/10ce-r351"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-01-01T00:00:00Z"}}, {"id": "10.15454/SVDTOU", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:37Z", "type": "Dataset", "title": "Statistiques spatio-temporelles sur les propri\u00e9t\u00e9s agronomiques des sols agricoles en France issues de la Base de Donn\u00e9es d'Analyses de Terre (BDAT)", "description": "In France, farmers commission about 250,000 soil-testing analyses per year to assist them managing soil fertility. The number and diversity of origin of the samples make these analyses an interesting and original information source regarding cultivated topsoil variability. Moreover, these analyses relate to several parameters strongly influenced by human activity (macronutrient contents, pH...), for which existing cartographic information is not very relevant. Compiling the results of these analyses into a database makes it possible to re-use these data within both a national and temporal framework. A database compilation relating to data collected over the period 1990-2014 has been recently achieved. So far, commercial soil-testing laboratories approved by the Ministry of Agriculture have provided analytical results from more than 3,600,000 samples. After the initial quality control stage, analytical results from more than 1,900,000 samples were available in the database. The anonymity of the landholders seeking soil analyses is perfectly preserved, as the only identifying information stored is the location of the nearest administrative city to the sample site. We present in this dataset a set of statistical parameters of the spatial distributions for several agronomic soil properties. These statistical parameters are calculated for 4 different nested spatial entities (administrative areas: e.g. regions, departments, counties and agricultural areas) and for 5 time periods (1990-1994, 1995-1999, 2000-2004, 2005-2009, 2010-2014). Two kinds of agronomic soil properties are available: the first one correspond to the quantitative variables like the organic carbon content, and the second one corresponds to the qualitative variables like the texture class. For each spatial unit and temporal period, we calculated the following statistics sets: the first set is calculated for the quantitative variables and corresponds to the number of samples, the mean, the standard deviation and, the 2-,4-,10-quantiles; the second set is calculated for the qualitative variables and corresponds to the number of samples, the value of the dominant class, the number of samples of the dominant class, the second dominant class, the number of samples of the second dominant class.", "keywords": ["2. Zero hunger", "Earth and Environmental Science", "Soils and soil sciences", "Earth and Environmental Sciences", "Soil Sciences", "soil texture", "15. Life on land", "soil analysis", "Environmental Research", "Natural Sciences", "Geosciences"], "contacts": [{"organization": "Saby, Nicolas P.A., Lemercier, Blandine, Arrouays, Dominique, Walter, Christian, Gouny, Laetitia, Swidersky, Chlo\u00e9, Toutain, Beno\u00eet, Bispo, Antonio,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.15454/SVDTOU"}, {"rel": "self", "type": "application/geo+json", "title": "10.15454/SVDTOU", "name": "item", "description": "10.15454/SVDTOU", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.15454/SVDTOU"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-01-01T00:00:00Z"}}, {"id": "10.1590/s0100-06832009000100016", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:43Z", "type": "Journal Article", "created": "2009-03-11", "title": "Atributos F\u00edsicos, Qu\u00edmicos E Biol\u00f3gicos De Solo De Cerrado Sob Diferentes Sistemas De Uso E Manejo", "description": "

\uffc3\uff80 medida que o conhecimento do sistema plantio direto se amplia, verifica-se que o uso de indicadores qu\uffc3\uffadmicos isolados n\uffc3\uffa3o permite melhor caracteriza\uffc3\uffa7\uffc3\uffa3o dos solos, sendo necess\uffc3\uffa1rio utilizar um conjunto de indicadores da qualidade do solo com a entrada de outros atributos, entre eles os f\uffc3\uffadsicos e os biol\uffc3\uffb3gicos. Objetivou-se avaliar os efeitos de sistemas de manejo e uso do solo nos atributos f\uffc3\uffadsicos, qu\uffc3\uffadmicos e biol\uffc3\uffb3gicos de um Latossolo Vermelho distr\uffc3\uffb3fico e um Neossolo Quartzar\uffc3\uffaanico \uffc3\uffb3rtico sob Cerrado, no entorno do Parque Nacional das Emas. Os aspectos avaliados no Latossolo foram: Cerrado nativo, pastagem, milheto em preparo convencional, nabo forrageiro em plantio direto e sorgo em plantio direto. No Neossolo: Cerrado nativo, pastagem nativa, integra\uffc3\uffa7\uffc3\uffa3o agricultura-pecu\uffc3\uffa1ria, pastagem cultivada, plantio direto com soja no ver\uffc3\uffa3o e plantio direto com milho no ver\uffc3\uffa3o. As amostras de solo foram coletadas na profundidade de 0 a 10 cm. O delineamento experimental foi o inteiramente casualizado, com cinco parcelas de 150 m\uffc2\uffb2, sendo coletadas 10 subamostras aleat\uffc3\uffb3rias. As an\uffc3\uffa1lises qu\uffc3\uffadmicas, f\uffc3\uffadsicas e biol\uffc3\uffb3gicas foram realizadas no Laborat\uffc3\uffb3rio de Solos da UFG/CJ. Os manejos promoveram altera\uffc3\uffa7\uffc3\uffb5es na densidade do solo, volume total de poros, macroporos e resist\uffc3\uffaancia do solo \uffc3\uffa0 penetra\uffc3\uffa7\uffc3\uffa3o no Neossolo e no Latossolo, excetuando-se neste o volume total de poros. Houve pequena varia\uffc3\uffa7\uffc3\uffa3o nos atributos qu\uffc3\uffadmicos nos dois solos, com o Cerrado apresentando maior acidez potencial e menor teor de c\uffc3\uffa1tions troc\uffc3\uffa1veis e P. Os atributos biol\uffc3\uffb3gicos do solo foram alterados pelos sistemas de manejo, sendo mais prejudicados em sistemas com maior revolvimento do solo. A an\uffc3\uffa1lise can\uffc3\uffb4nica dos dados demonstrou que os atributos f\uffc3\uffadsicos foram os de menor import\uffc3\uffa2ncia por apresentar maior coeficiente de pondera\uffc3\uffa7\uffc3\uffa3o nas vari\uffc3\uffa1veis can\uffc3\uffb4nicas. Os atributos do solo, isoladamente, pouco contribu\uffc3\uffadram para a avalia\uffc3\uffa7\uffc3\uffa3o da qualidade do solo: no entanto, quando se usou a an\uffc3\uffa1lise multivariada, subsidiaram a constata\uffc3\uffa7\uffc3\uffa3o dos manejos do solo mais sustent\uffc3\uffa1veis.

", "keywords": ["C fra\u00e7\u00e3o leve", "multivariate analysis", "an\u00e1lise multivariada", "plantio direto", "light carbon fraction", "0401 agriculture", " forestry", " and fisheries", "soil quality", "04 agricultural and veterinary sciences"]}, "links": [{"href": "https://doi.org/10.1590/s0100-06832009000100016"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Revista%20Brasileira%20de%20Ci%C3%AAncia%20do%20Solo", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1590/s0100-06832009000100016", "name": "item", "description": "10.1590/s0100-06832009000100016", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1590/s0100-06832009000100016"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-02-01T00:00:00Z"}}, {"id": "10261/329904", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-01T16:24:29Z", "type": "Report", "title": "Soil organic matter origin, dynamic and fate : A state-of-the-art research addressing Mediterranean agroecosystems main threats", "description": "Open AccessPeer reviewed", "contacts": [{"organization": "M\u00e1rquez San Emeterio, Layla", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10261/329904"}, {"rel": "self", "type": "application/geo+json", "title": "10261/329904", "name": "item", "description": "10261/329904", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10261/329904"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-01T00:00:00Z"}}, {"id": "10.18174/509232", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:53Z", "type": "Report", "created": "2020-03-16", "title": "Novel soil quality indicators for the evaluation of agricultural management practices: a biological perspective", "description": "Developments in soil biology and methods to characterize soil organic carbon have the potential to deliver novel soil quality indicators that can help to identify soil management practices that sustain soil productivity and environmental resilience. This thesis aimed at investigating the suitability of a range of soil biological and biochemical parameters as novel soil quality indicators for agricultural management. The soil parameters, selected through a literature review, comprised different labile organic carbon fractions (hydrophilic dissolved organic carbon (Hy-DOC), dissolved organic carbon (DOC), permanganate oxidizable carbon (POXC), hot water extractable carbon (HWEC) and particulate organic matter carbon (POMC), ordered here from the smallest to the largest proportion of the total organic carbon), soil disease suppressiveness measured with a Pythium-Cress bioassay, nematode communities characterized with amplicon sequencing and qPCR, and microbial community level physiological profiling (CLPP) measured with MicroRespTM. We tested the sensitivity of the novel indicators to tillage and organic matter addition in 10 European long-term field experiments, and assessed their relationship with already existing soil quality indicators linked to soil functioning. Lastly, the results of these experimental chapters are interpreted relative to each other and to the broader body of literature on soil quality assessments. Moreover, pros and cons of the novel indicators are discussed, and possibilities and needs for future research are outlined. Reduced tillage increased carbon availability, disease suppressiveness, nematode richness and diversity, the stability and maturity of the food web, and microbial activity and functional diversity. Organic matter addition had a weaker role in sustaining soil quality, possibly due to the different compositions of the organic matter inputs in the long-term field experiments that were sampled. Random forest analysis showed that POXC was the indicator that discriminates soil management most, and structural equation modelling showed its central role in nutrient cycling, carbon sequestration, biodiversity conservation, erosion control and disease regulation/suppression. The novel indicators proposed here have great potential to improve existing soil quality assessment schemes, but their usefulness is still to be validated and optimized.", "keywords": ["2. Zero hunger", "13. Climate action", "Life Science", "15. Life on land"], "contacts": [{"organization": "Bongiorno, Giulia", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.18174/509232"}, {"rel": "self", "type": "application/geo+json", "title": "10.18174/509232", "name": "item", "description": "10.18174/509232", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.18174/509232"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-16T00:00:00Z"}}, {"id": "10.1894/mh-34.1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:57Z", "type": "Journal Article", "created": "2009-03-03", "title": "Influence Of Rainfall, Type Of Range, And Brush Management On Abundance Of Northern Bobwhites (Colinus Virginianus) In Southern Texas", "description": "Assessing numerical response of northern bobwhites (Colinus virginianus) to habitat improvement in semi-arid rangeland often is confounded by responses of populations to highly variable patterns of rainfall. During 2 years of above-average rainfall, we investigated abundance of northern bobwhites relative to type of range and treatments to reduce brush on seven ranches in southern Texas. We expected response of populations to treatment of land to be more evident when northern bobwhites were released from constraints of low precipitation. However, main factors dominating abundance were rainfall during the previous growing season and type of range. Greatest numbers of calls were in mid- productivity rangeland (potential production of forage 2,000-3,900 kg/ha), especially sandy loam, clay loam, sandy, and gravelly ridge. Treatments to reduce brush increased abundance of northern bobwhites to a limited extent and were most effective when large blocks of land were treated. Techniques that kill brush (root-plowing) were more successful in increasing populations than top- removal methods (roller-chopping). Leaving strips or mottes (large clumps of living brush and trees) in cleared areas did not enhance populations, although we caution that retaining some brush cover may be important to survival of northern bobwhites in drier years and in situations where herbaceous cover is less abundant. RESUMEN\u2014Determinar la respuesta numerica de codornices nortenas (Colinus virginianus )at ecnicas para mejorar el habitat en pastizales semiaridos es confundido por las respuestas poblacionales a patrones altamente variables de precipitacion. Durante dos anos de precipitacion ma alta que la media, investigamos la abundancia de codornices con respecto al tipo de pastizal y tratamientos para reducir arbustos en siete ranchos en el sur de Texas. Esperamos la respuesta de la poblacion al tratamiento de la tierra ser mas evidente cuando las codornices fueron liberadas de los apremios de baja precipitacion. Sin embargo, los factores mas dominantes para determinar la abundancia fueron la precipitacion durante la estacion de crecimiento anterior y el tipo de pastizal. Mas silbidos fueron registrados en los pastizales de productividad mediana (produccion de forraje potencial de 2.000-3.900 kg/ha), especialmente en pastizales con suelos marga-arenosos, marga-arcillosos, arenosos, y pastizales en bordes pedregosos. Tratamientos para reducir arbustos aumentaron la abundancia de codornices a un grado limitado y fueron mas eficaces cuando terrenos grandes fueron tratados. Los tratamientos de remocion de arbustos (remocion de rao \u00b4ces) fueron mas exitosos para incrementar la poblacion que los metodos de remocion superior (la eliminacion de biomasa aerea). Dejando bandas o grandes grupos de arbustos y arboles en areas despejadas no mejorolas poblaciones, aunque consideramos importante indicar que retener alguna cobertura arbustiva podro \u00b4a ser importante para la supervivencia de codornices en anos mas secos y en situaciones donde la cobertura herbacea es menor.", "keywords": ["2. Zero hunger", "0106 biological sciences", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "Susan M. Cooper, James C. Cathey, D. Lang Alford, Shane S. Sieckenius,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.1894/mh-34.1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/The%20Southwestern%20Naturalist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.1894/mh-34.1", "name": "item", "description": "10.1894/mh-34.1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.1894/mh-34.1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2009-03-01T00:00:00Z"}}, {"id": "10.20944/preprints202504.2122.v1", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-01T16:19:59Z", "type": "Report", "created": "2025-04-28", "title": "Citizen Science for Soil Monitoring and Protection", "description": "

Citizen science (CS) is increasingly recognized as a complementary approach for addressing soil health challenges - including erosion, pollution, nutrient imbalances, and biodiversity loss - by harnessing public participation to broaden spatial and temporal data collection. This review synthesizes findings from (i) a systematic analysis of peer-reviewed literature and grey sources, (ii) a database of 96 CS initiatives compiled by the PrepSoil project, and (iii) questionnaire surveys and workshops conducted in five European Living Labs. Our analysis indicates that volunteer-driven monitoring can enhance the volume and granularity of soil data, providing critical insights into parameters such as organic carbon content, nutrient levels, and pollutant concentrations. However, persistent challenges remain, including inconsistencies in data validation, volunteer attrition, and concerns regarding digital literacy and data privacy. Despite these challenges, ongoing efforts to standardize protocols, integrate remote sensing and sensor-based validation methods, and employ feedback mechanisms improve data reliability and participant engagement. We conclude that sustained capacity-building, transparent data governance, and stakeholder collaboration - from local communities to governmental bodies - are essential for fully realizing the potential of citizen science in soil conservation. CS can meaningfully support sustainable land management and evidence-based policymaking by aligning public-generated observations with established scientific frameworks.

", "contacts": [{"organization": "Karel Charv\u00e1t, Jaroslav \u0160mejkal, Petr Hor\u00e1k, Mark\u00e9ta Kollerov\u00e1, \u0160\u00e1rka Hor\u00e1kov\u00e1, Pierre Renault,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.20944/preprints202504.2122.v1"}, {"rel": "self", "type": "application/geo+json", "title": "10.20944/preprints202504.2122.v1", "name": "item", "description": "10.20944/preprints202504.2122.v1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.20944/preprints202504.2122.v1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-04-25T00:00:00Z"}}, {"id": "10.2111/08-106.1", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:19:59Z", "type": "Journal Article", "created": "2010-01-22", "title": "Land Use Influences Carbon Fluxes In Northern Kazakhstan", "description": "A mobile, closed-chamber system (CC) was used to measure carbon and water fluxes on four land-use types common in the Kazakh steppe ecoregion. Land uses represented crop (wheat or barley, WB), abandoned land (AL), crested wheatgrass (CW), and virgin land (VL). Measurements were conducted during the growing season of 2002 in northern Kazakhstan at three locations (blocks) 15\u201320 km apart. The CC allowed the measurement of the carbon flux components of net ecosystem exchange (NEE), ecosystem respiration (RE) and soil respiration (RS), together with evapotranspiration (ET). Nonlinear regression analyse sw ere used to model gross primary production (GPP) and ET as a function of photosynthetically active radiation (Q); RE and RS were modeled based on air (Tair) and soil (Ts) temperature, respectively. GPP, RE, RS, and ET were estimated for the entire year with the use of continuous 20-min means of Q, Tair, and Ts. Annual NEE indicated that AL gained 536 g CO2 ? m 22 , WB lost 2 191 g CO2 ? m 22 , CW was near equilibrium (2 14 g CO2 ? m 22 ), and VL exhibited considerable carbon accumulation (153 g CO2 ? m 22 ). The lower GPP values of the land-use types dominated by native species (CW and VL) compared to WB and AL were compensated by positive NEE values that were maintained during a longer growing season. As expected, VL and CW allocated a larger proportion of their carbon assimilates belowground. Non\u2013growing-season RE accounted for about 19% of annual RE in all land-use types. The results of this landscape-level study suggest that carbon lost by cultivation of VLs is partially being restored when fields are left uncultivated, and that VLs are net sinks of carbon. Estimations of carbon balances have important management implications, such as estimation of ecosystem productivity and carbon credit certification. Resumen", "keywords": ["2. Zero hunger", "abandoned fields", "13. Climate action", "15. Life on land", "01 natural sciences", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://doi.org/10.2111/08-106.1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Rangeland%20Ecology%20%26amp%3B%20Management", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2111/08-106.1", "name": "item", "description": "10.2111/08-106.1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2111/08-106.1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-01-01T00:00:00Z"}}, {"id": "10.21203/rs.3.rs-5128244/v1", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-01T16:20:00Z", "type": "Report", "created": "2024-09-23", "title": "Spatiotemporal prediction of soil organic carbon density for Europe (2000--2022) in 3D+T based on Landsat-based spectral indices time-series", "description": "Abstract

The paper describes a comprehensive framework for soil organic carbon density (SOCD) (kg/m3) modeling and mapping, based on spatiotemporal Random Forest (RF) and Quantile Regression Forests (QRF). 22,428 SOCD measurements and a wide range of covariate layers\u2014particularly the 30m Landsat-based spectral indices were used to fit models and produce 30~m SOCD maps for the entire EU at four-year intervals from 2000 to 2022 and for four soil depth intervals (0--20cm, 20--50cm, 50--100cm, and 100--200cm) each accompanied by per-pixel 95% probability prediction intervals (PI, between P0.025 and P0.975). The results of model evaluation indicate consistent accuracy of the predictions: based on both 5--fold spatial cross-validation with model refitting (MAE = 8.64 kg/m3 , MedAE = 4.31 kg/m3 , MAPE = 0.54 kg/m3 and bias = -2.95 kg/m3 ), and on independent testing (MAE = 7.73 kg/m3 , MedAE = 3.54 kg/m3 , MAPE = 0.45 kg/m3 , and bias = -3.04 kg/m3), with both R2 values exceeding 0.7 and concordance correlation coefficients (CCC) greater than 0.8. Validation of PI estimation confirmed that PIs effectively capture uncertainty intervals, although with reduced accuracy for higher SOCD values. Exploratory analysis using Shapley values identified soil depth as the most important feature, with vegetation (Landsat biophysical indices) and long-term bio-climate features as the two main contributing feature groups. Although the uncertainty of the prediction per pixel is significant, further spatial aggregation has been shown to reduce the uncertainty by about 70%. Suggested uses of the data include: (1) time-series / trend analysis to detect potential land degradation hotspots, (2) optimization of sampling designs based on prediction uncertainty, and (3) prediction of future soil carbon potential by extrapolating models under different land use / climate scenarios. The data and code used are publicly available under an open license from https://doi.org/10.5281/zenodo.13754344 and https://github.com/AI4SoilHealth/SoilHealthDataCube/.

", "contacts": [{"organization": "Tian, Xuemeng, de Bruin, Sytze, Simoes, Rolf, Isik, Mustafa Serkan, Minarik, Robert, Ho, Yu-Feng, \u015eahin, Murat, Herold, Martin, Consoli, Davide, Hengl, Tomislav,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.21203/rs.3.rs-5128244/v1"}, {"rel": "self", "type": "application/geo+json", "title": "10.21203/rs.3.rs-5128244/v1", "name": "item", "description": "10.21203/rs.3.rs-5128244/v1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.21203/rs.3.rs-5128244/v1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-09-24T00:00:00Z"}}, {"id": "10261/351480", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-01T16:24:30Z", "type": "Report", "title": "Urban greenspaces and nearby natural areas support similar levels of soil ecosystem services", "description": "Open AccessPeer reviewed"}, "links": [{"href": "https://doi.org/10261/351480"}, {"rel": "self", "type": "application/geo+json", "title": "10261/351480", "name": "item", "description": "10261/351480", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10261/351480"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-01T00:00:00Z"}}, {"id": "10.2307/1351977", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:28Z", "type": "Journal Article", "created": "2006-04-13", "title": "Are Spartina Marshes A Replaceable Resource - A Functional-Approach To Evaluation Of Marsh Creation Efforts", "description": "Marsh creation has come into increasing use as a measure to mitigate loss of valuable wetlands. However, few programs have addressed the functional ecological equivalence of man-made marshes and their natural counterparts. This study addresses structural and functional interactions in a man-made and two natural marshes. This was done by integrating substrate characteristics and marsh utilization by organisms of two trophic levels. Sediment properties, infaunal community composition, andFundulus heteroclitus marsh utilization were compared for a man-madeSpartina salt marsh (between ages 1 to 3 yr) in Dills Creek, North Carolina, and adjacent natural marshes to the east and west. East natural marsh and planted marsh sediment grain-size distributions were more similar to each other than to the west natural marsh due to shared drainage systems, but sediment organic content of the planted marsh was much lower than in either natural marsh. This difference was reflected in macrofaunal composition. Natural marsh sediments were inhabited primarily by subsurface, deposit-feeding oligochaetes whereas planted marsh sediments were dominated by the tube-building, surface-deposit feeding polychaetesStreblospio benedicti andManayunkia aestuarina. Infaunal differences were mirrored inFundulus diets. Natural marsh diets contained more detritus and insects, because oligochaetes, though abundant, were relatively inaccessible. Polychaetes and algae were major constituents of the planted marshFundulus diet. Though naturalmarsh fish may acquire a potentially less nutritive, detritus-based diet relative to the higher animal protein diet of the planted marsh fish,Fundulus abundances were markedly lower in the planted marsh than in the natural marshes, indicating fewer fish were being supported. LowerSpartina stem densities in the planted marsh may have provided inadequate protection from predation or insufficient spawning sites for the fundulids. After three years, the planted marsh remained functionally distinct from the adjacent natural marshes. Mitigation success at Dills Creek could have been improved by increasing tidal flushing, thereby enhancing, access to marine organisms and by mulching withSpartina wrack to increase sediment organic-matter content and porosity. Results from this study indicate that salt marshes should not be treated as a replaceable resource in the short term. The extreme spatial and temporal variability inherent to salt marshes make it virtually impossible to exactly replace a marsh by planting one on another site.", "keywords": ["0106 biological sciences", "14. Life underwater", "15. Life on land", "01 natural sciences", "6. Clean water"]}, "links": [{"href": "https://doi.org/10.2307/1351977"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Estuaries", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2307/1351977", "name": "item", "description": "10.2307/1351977", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2307/1351977"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1991-03-01T00:00:00Z"}}, {"id": "10261/179481", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:26Z", "type": "Journal Article", "created": "2018-07-19", "title": "Molecular Fingerprinting of14C Dated Soil Organic Matter Fractions from Archaeological Settings in NW Spain", "description": "Abstract

This paper evaluates the complexities of radiocarbon (14C) dates from soil organic matter (SOM) in archaeological scenarios. The aqueous NaOH-insoluble residual SOM from Neolithic to medieval sites in NW Spain produced consistently older calibrated14C ages than NaOH-extractable SOM. Using pyrolysis-gas chromatography-mass spectrometry (Py-GC-MS) and thermally assisted hydrolysis and methylation (THM-GC-MS), we analyzed the molecular composition of these SOM fractions, aiming to understand the differences in14C ages and to gain insight on SOM dynamics in relation to age fractionation. The molecular composition of the NaOH-extractable SOM, which accounts for roughly two-thirds of total SOM, has a larger proportion of microbial detritus than the NaOH-insoluble SOM. This might suggest that the discrepancies between the two fractions is due to microbial rejuvenation in the extractable fraction, leading to14C results that are younger than the activity that is to be dated. However, archaeological evidence presented here unambiguously shows that the14C age of the extractable SOM provides the more accurate age for the targeted activity, and that the insoluble fraction contains inherited old carbon. After statistical data evaluation using Partial Least Squares-Regression (PLS-R), it is concluded that this inherited SOM is a mixture of Black Carbon from wild and/or domestic fires and recalcitrant aliphatic SOM.

The soil water retention curve (SWRC) is essential for describing water and energy exchange processes at the interface between the solid earth and the atmosphere. Despite its importance, measuring the SWRC using standard laboratory methods is challenging and time-consuming. This paper presents a novel physics-informed neural network (PINN) approach for developing pedotransfer functions (PTFs) to predict continuous SWRCs based on soil texture, organic carbon content, and dry bulk density. In contrast to conventional parametric PTFs developed for specific SWRC models, the PINN learns a non-specific form of the SWRC by effectively integrating both measurements and physical constraints into the training process. This approach allows the estimated SWRC to maintain its physical integrity from saturation to oven-dry conditions, even in scenarios with sparse data. The new approach is particularly effective for tackling the challenges encountered in developing PTFs on large SWRC datasets, which often have an imbalance towards the wet-end and include numerous samples with limited and unevenly distributed measurements. We compared the performance of the PINN with that of a conventional physics-agnostic neural network using a dataset of 4200 soil samples. While both networks performed similarly at the wet-end where data are abundant, the PINN excelled at the dry-end where data are sparse and unevenly distributed, achieving a normalized RMSE of 0.172 compared to 0.522 for the conventional neural network. The SWRC derived from the PINN is differentiable with respect to the matric potential and can be seamlessly integrated into the governing equations of water flow in the unsaturated zone.

", "keywords": ["Environmental sciences", "physics-constrained machine learning", "physics\u2010constrained machine learning", "soil hydraulic properties", "GE1-350", "15. Life on land", "continuous pedotransfer functions"]}, "links": [{"href": "https://doi.org/10.22541/essoar.171865325.50703739/v1"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Water%20Resources%20Research", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.22541/essoar.171865325.50703739/v1", "name": "item", "description": "10.22541/essoar.171865325.50703739/v1", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.22541/essoar.171865325.50703739/v1"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-06-17T00:00:00Z"}}, {"id": "10.2307/2265779", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:30Z", "type": "Journal Article", "created": "2006-05-09", "title": "Responses Of A C-4 Grass And Three C-3 Forbs To Variation In Nitrogen And Light In Tallgrass Prairie", "description": "

In tallgrass prairie, high plant species diversity results not from a large number of grass species, but from a large number of forb (nongrass, herbaceous) species. Forbs exhibit morphological, life history, and ecophysiological characteristics that contrast sharply with those of the dominant C4 grasses. Success of the subdominant forbs varies strongly with topographic position and burning regime, and landscape scale patterns of abundance are well documented. But comparatively little is known about the mechanisms determining these patterns in persistent tallgrass prairie forbs. To elucidate these mechanisms, (1) leaf\uffe2\uff80\uff94level physiological characteristics of the dominant C4 grass, Andropogon gerardii, and four co\uffe2\uff80\uff94occurring C3 forbs were measured in response to natural and experimentally manipulated gradients of N availability, and (2) seasonal light environments of forbs in contrasting topographic positions and burning regimes and their morphological and physiological responses in these environments were compared to determine whether resource availability and utilization patterns contributed to patterns of forb distribution and abundance. The effects of burning regime and topographic position on maximum rate of photosynthesis (A) and stomatal conductance to water vapor (g) measured at the leaf level were not consistent with patterns of forb abundance. Nitrogen did not appear to limit forb physiological processes, even though increased N availability resulted in higher tissue N concentrations and greater biomass. There was no consistent increase in (A) or decrease in (g) in response to fertilization. However, (A) at low light levels was as much as 67% higher in fertilized Vernonia baldwinii and A. gerardii compared to unfertilized plants. Greater light availability to forbs in the canopy was associated with lower grass biomass production in uplands compared to lowlands and in unburned compared to burned sites. Forbs did not appear to adjust morphologically (leaf area and plant height) to different light environments at different sites. As a result, as much as 90% of forb leaf area in the burned lowland was displayed in low light, whereas as little as 30% of forb leaf area was in low light in the uplands at midseason. Estimates of potential whole\uffe2\uff80\uff94plant carbon uptake, based on leaf area distribution relative to available light and (A) as a function of light availability, agreed well with patterns of forb abundance and production. Differences in light availability may account for much of the variability in forb abundance related to burning regime and topographic position by limiting carbon gain in forbs more in burned lowlands than in other sites.

", "keywords": ["0106 biological sciences", "2. Zero hunger", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "C. L. Turner, Alan K. Knapp,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.2307/2265779"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Ecology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2307/2265779", "name": "item", "description": "10.2307/2265779", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2307/2265779"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1996-09-01T00:00:00Z"}}, {"id": "10.2307/2425415", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:31Z", "type": "Journal Article", "created": "2006-04-24", "title": "The Effect Of Nitrogen-Fertilization On The Production Of Halophytes In An Inland Salt-Marsh", "description": "The effect of nitrogen fertilization on plant production, soil and plant nitrogen content, and species distribution in an Ohio salt marsh was analyzed. Seasonal measurements indicate that the three dominant species attained maximal production at different times during the growing season. Production of Salicornia europaea increased with nitrogen fertilization and it appears that reduced soil nitrogen concentrations may be responsible for the different growth forms of S. europaea found in this marsh. Shoot nitrogen concentrations of S. europaea were inversely related to the growth response to fertilization. High tissue nitrogen concentrations in Hordeum jubatum and Atriplex triangularis suggest that some factor other than nitrogen is limiting to these species. INTRODUCTION A number of studies concerning production of plants in coastal salt marsh ecosystems suggest that productivity may be limited by availability of nitrogen (Tyler, 1967; Pigott, 1969; Stewart et al., 1972, 1973; Valiela and Teal, 1974; Gallagher, 1975; Patrick and Delaune, 1976; Mendelssohn, 1979b; Haines, 1979). Smart and Barko (1980) showed that although biomass was ultimately determined by the availability of nitrogen, growth rate was affected by the salinity of the sediments. Other effects of nitrogen fertilization on coastal salt marsh vegetation include: increased allocation of resources to sexual reproduction (Jefferies and Perkins, 1977), increased levels of nitrogen in the plant material (Buresh et al., 1980; Pigott, 1969) and a change in the distribution of plants in the salt marsh (Valiela et al., 1975). While these studies suggest that nitrogen may be an important limiting factor in the productivity of coastal marshes, no studies have been done to ascertain if this is true in inland salt marshes. Studies of plant production from inland saline areas (Hadley and Buccos, 1967, Hadley, 1970) have either not examined it in relation to nitrogen limitation, or else have concentrated on the response to nitrogen additions of a single species when grown under greenhouse conditions (Cords, 1960). Lack of tidal action and differences in species composition preclude the assumption that coastal and inland salt marshes respond similarly tonitrogen addition. The Atlantic coastal marshes of the United States are generally characterized by a bay-to-upland sequence of zones consisting of perennial grasses in the low marsh, giving way to annual succulents in the higher portions of the marsh (Niering and Warren, 1980). In an Ohio salt marsh this vegetational pattern was reversed. The annual species Salicornia europaea and Atriplex triangularis form two zones bordering the center of the saline pan with the perennial grass Hordeumjubatum occurring on the outer edge of the marsh, in the area of lower salinity (Ungar et al., 1979). The objectives of this study were to determine seasonal change in plant production, the effect of the nitrate and ammonium forms of nitrogen fertilization on plant production in an inland salt marsh and to determine if nitrogen deficiencies are responsible for the difference in the growth forms of Salicornia. MATERIALS AND METHODS The study area is a saline pan located at the site of the Morton Salt Company, in the city of Rittman, Wayne Co., Ohio (long. 810 47' 30', lat. 400 57' 30':SW?4 Sec 12, T 18N, R 13W). Three vegetation zones characterize the site: a Hordeum jubatum zone, an Atriplex triangularis zone and a zone of Salicornia europaea that was divided into", "keywords": ["0106 biological sciences", "2. Zero hunger", "15. Life on land", "01 natural sciences"], "contacts": [{"organization": "Irwin A. Ungar, David G. Loveland,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.2307/2425415"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/American%20Midland%20Naturalist", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2307/2425415", "name": "item", "description": "10.2307/2425415", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2307/2425415"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "1983-04-01T00:00:00Z"}}, {"id": "10.23986/afsci.148486", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:33Z", "type": "Journal Article", "created": "2025-05-26", "title": "Defining critical SOC/clay thresholds for soil health in boreal croplands using satellite-based NDVI proxies for productivity and resilience", "description": "

The European Union\u2019s soil strategy underscores the necessity for establishing feasible criteria to assess the soil health condition. In this study, we developed a method to define a critical threshold value for SOC/clay ratio on the basis of crop productivity and resilience. The study integrated data from national soil monitoring (NSM) of Finnish cropland soils (n=505) with satellite-based normalized difference vegetation index (NDVI) obtained from the EcoDataCube (EDC) portal. The study area was confined to the boreal environmental zone to ensure consistent pedo-climatic conditions. The results show that the interannual variation in crop productivity increases rapidly below SOC/clay ratio of 0.09 (95% confidence intervals ranging from 0.07 to 0.16), whereas the corresponding threshold for mean productivity was 0.13 (0.09\u20130.16). The observed threshold values were found applicable for both cereals and temporary ley. The SOC/clay ratio of 1:13 (=0.08), regarded as a criterion for healthy soil in the current Soil Monitoring Law proposal, based on studies by Johannes et al. (2017) and Prout et al. (2021), is lower than the mean thresholds estimated in this study but aligns close to the lower bound of the 95% confidence intervals. In this research, Finnish agricultural land served as the case study area, but the method is easily applicable to various pedo-climatic regions and potentially to different land use types.

", "keywords": ["S", "Soil Monitoring Law", " SOC/clay ratio", " cropland", " NDVI", " satellite data", " national soil monitoring", "Agriculture (General)", "Agriculture", "S1-972"], "contacts": [{"organization": "Heikkinen, Jaakko, Keskinen, Riikka, Ylivainio, Kari,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.23986/afsci.148486"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Agricultural%20and%20Food%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.23986/afsci.148486", "name": "item", "description": "10.23986/afsci.148486", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.23986/afsci.148486"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-05-26T00:00:00Z"}}, {"id": "10.24193/subbphil.2021.2s.05", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:33Z", "type": "Journal Article", "created": "2021-11-11", "title": "EXP\u00c9RIMENTER LA PENS\u00c9E EN SCH\u00c9MAS-IMAGES. DES ADOLESCENTS S\u2019INTERROGENT \u00ab D\u2019O\u00d9 VIENNENT LES PENS\u00c9ES ? \u00bb", "description": "

Experimenting Thinking in Image Schemas. Teenagers are Wondering \u201cWhere Do Thoughts Come From?\u201d. An intellectual view of philosophy as an activity focusing on understanding abstract concepts and their relationships deprives philosophical exercise of the participation of the body and senses. If we reject the mind-body dualism, as Dewey, Johnson, etc. did, then we are constantly engaged in interactions with the world and others, and can thus consider the act of thinking from our own experiences. Inspired by an experimentalist conception of school and life, as well as the method of inquiry developed by Dewey, the Philosophy for Children program provides an inquiry process that invites participants to conceptualize and reason philosophically in a collaborative manner. Do these practices implement an embodied cognition? To find out, we selected a discussion as a case study and analyzed it based on the observation that the issue to be discussed by the participants - \u201cwhere do thoughts come from?\u201d contains two image schemas: path (come from) and source (where). We have noted a variety and a significant number of expressions (\u201cthey come from within\u201d, \u201cthey come from what happens outside\u201d, etc.) whose analysis enhances a better understanding of how an experience of understanding the origins of our thoughts fits into the discourse and contributes to a collective conceptualization of \u201cthinking\u201d.

", "keywords": ["4. Education", "B1-5802", "image schemas", " perceptual experience", " conceptualisation", " community of philosophical inquiry", " experimentalism.", "Philosophy (General)", "16. Peace & justice", "3. Good health"]}, "links": [{"href": "https://doi.org/10.24193/subbphil.2021.2s.05"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Studia%20Universitatis%20Babe%C8%99-Bolyai%20Philosophia", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.24193/subbphil.2021.2s.05", "name": "item", "description": "10.24193/subbphil.2021.2s.05", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.24193/subbphil.2021.2s.05"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2021-10-30T00:00:00Z"}}, {"id": "10.2489/jswc.72.4.361", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:35Z", "type": "Journal Article", "created": "2017-06-24", "description": "Cover cropping is a widely promoted strategy to enhance soil health in agricultural systems. Despite a substantial body of literature demonstrating links between cover crops and soil biology, an important component of soil health, research evaluating how specific cover crop species influence soil microbial communities remains limited. This study examined the effects of eight fall-sown cover crop species grown singly and in multispecies mixtures on microbial community structure and soil biological activity using phospholipid fatty acid (PLFA) profiles and daily respiration rates, respectively. Fourteen cover crop treatments and a no cover crop control were established in August of 2011 and 2012 on adjacent fields in central Pennsylvania following spring oats (Avena sativa L.). Soil communities were sampled from bulk soil collected to a depth of 20 cm (7.9 in) in fall and spring, approximately two and nine months after cover crop planting and prior to cover crop termination. In both fall and spring, cover crops led to an increase in total PLFA concentration relative to the arable weed community present in control plots (increases of 5.37 nmol g\u22121 and 10.20 nmol g\u22121, respectively). While there was a positive correlation between aboveground plant biomass (whether from arable weeds or cover crops) and total PLFA concentration, we also found that individual cover crop species favored particular microbial functional groups. Arbuscular mycorrhizal (AM) fungi were more abundant beneath oat and cereal rye (Secale cereale L.) cover crops. Non-AM fungi were positively associated with hairy vetch (Vicia villosa L.). These cover crop-microbial group associations were present not only in monocultures, but also multispecies cover crop mixtures. Arable weed communities were associated with higher proportions of actinomycetes and Gram-positive bacteria. Soil biological activity varied by treatment and was positively correlated with both the size and composition (fungal:bacterial ratio) of the microbial community. This research establishes a clear link between cover crops, microbial communities, and soil health. We have shown that while cover crops generally promote microbial biomass and activity, there are species-specific cover crop effects on soil microbial community composition that ultimately influence soil biological activity. This discovery paves the way for intentional management of the soil microbiome to enhance soil health through cover crop selection.", "keywords": ["2. Zero hunger", "0401 agriculture", " forestry", " and fisheries", "04 agricultural and veterinary sciences", "15. Life on land"]}, "links": [{"href": "https://doi.org/10.2489/jswc.72.4.361"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Soil%20and%20Water%20Conservation", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.2489/jswc.72.4.361", "name": "item", "description": "10.2489/jswc.72.4.361", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.2489/jswc.72.4.361"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-07-01T00:00:00Z"}}, {"id": "10261/306235", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:29Z", "type": "Journal Article", "created": "2023-03-31", "title": "Negotiating Gender Roles in Academia: A Courageous Exploration", "description": "Open AccessPeer reviewed", "keywords": ["Women in Limnology", "5. Gender equality", "Gender Roles in Academia", "http://metadata.un.org/sdg/5", "Achieve gender equality and empower all women and girls", "16. Peace & justice"]}, "links": [{"href": "https://doi.org/10261/306235"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Limnology%20and%20Oceanography%20Bulletin", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10261/306235", "name": "item", "description": "10261/306235", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10261/306235"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-03-31T00:00:00Z"}}, {"id": "10261/359343", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:31Z", "type": "Dataset", "title": "Plant affinity to extreme soils and foliar sulphur mediate species-specific responses to sheep grazing in gypsum systems [Dataset V2]", "description": "Open AccessPeer reviewed", "keywords": ["Semiarid systems", "Gypsophiles", "Elemental composition", "Gypsum soils", "Herbivory", "Functional traits"], "contacts": [{"organization": "Cera, Andreu, Montserrat-Mart\u00ed, Gabriel, Luzuriaga, Arantzazu L., Pueyo, Yolanda, Palacio, Sara,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10261/359343"}, {"rel": "self", "type": "application/geo+json", "title": "10261/359343", "name": "item", "description": "10261/359343", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10261/359343"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-01-01T00:00:00Z"}}, {"id": "10261/398717", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:33Z", "type": "Other", "title": "Morphological and molecular characterisation of Ditylenchoides morocciensis sp. nov. (Nematoda: Anguinoidea) from Morocco", "description": "Open AccessPeer reviewed", "keywords": ["Morphology", "Cytochrome oxidase c subunit 1", "D2-D3 of 28S rRNA", "Description", "Olive", "ITS rRNA"], "contacts": [{"organization": "Salazar-Garc\u00eda, Rosana, Palomares Rius, Juan E., Bajoub, A, Ajal, E. A., Cantalapiedra-Navarrete, C., Criado-Navarro, Inmaculada, Li\u00e9banas, Gracia, Castillo, Pablo, Archidona-Yuste, Antonio,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10261/398717"}, {"rel": "self", "type": "application/geo+json", "title": "10261/398717", "name": "item", "description": "10261/398717", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10261/398717"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2025-01-01T00:00:00Z"}}, {"id": "10.33140/jgrm.07.02.03", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:41Z", "type": "Journal Article", "created": "2023-05-31", "title": "Risk-Reducing Salpingectomy And Other Strategies For Prevention Of Ovarian And Tubal Carcinoma", "description": "

Objective: To provide a review of most current evidence and data for risk-reducing strategies used in prevention of ovarian cancer. Methods of study selection: PubMed was used as a search tool for articles with key words focusing on current strategies on prevention of ovarian cancer such as \u201crisk-reducing salpingectomy, \u201crisk-reducing salpingo-oophorectomy, \u201csalpingectomy with delayed oophorectomy\u201d. General consensus and society guidelines from leading organizations such as Society of Gynecologic Oncology, American Cancer Society, and American College of Obstetricians and Gynecologists were reviewed and summarized in this review article with supporting evidence and research studies on most current riskreduction strategies for prevention of ovarian and tubal carcinoma. Result: There is growing evidence that high-grade serous ovarian carcinoma arises in the fallopian tube in the form of serous tubal intraepithelial carcinoma (STIC). Therefore, opportunistic salpingectomy has been increasingly offered at the time of routine benign gynecologic surgery. Risk-reducing bilateral salpingo-oophorectomy has been shown to reduce risk of ovarian cancer up to 90% and offered to women with high hereditary predisposition for ovarian cancer. Riskreducing salpingectomy with delayed oophorectomy (SDO) has been suggested in younger women to balance the effects of infertility and surgically induced menopause resulting from oophorectomy. Conclusion: Combined oral Contraceptive COCs confer long-term protection against ovarian cancer with reported 20% reduction for every 5 years of use, which have been cited as a confounding factor in most of the published studies. Women who used HRT (estrogen alone or combined estrogen and progesterone) carry 20% higher risk of ovarian cancer compared to never-users. The associated increased risk of cervical and breast cancer with COCs/HTR use, have recently let women prefer the RRSO over COCs for prevention of ovarian cancer. Bilateral risk reducing Salpingo-oophorectomy (RRSO) at the age of 40\u201345 in BRCA1 and 45\u201350 in BRCA2 mutation carriers is recommended to be the primary approach for risk reduction of ovarian cancer. There is well-supported evidence of lowering the risk of ovarian cancer in high-risk population by 90%. The American college of obstetrics and gynecology committee opinion, recommended opportunistic salpingectomy for the primary prevention of ovarian cancer in a woman already undergoing pelvic surgery for another indication. Bilateral salpingectomy at the time of cesarean delivery is recommended to replace the tubal ligation as the method of choice for sterilization performed with cesarean delivery. The novel alternative procedure of Risk-reducing Salpingectomy with delayed risk-reducing oophorectomy (RRSO-RRO) have growing attention as a better alternative to improve the menopause-related morbidity and quality of life.

", "keywords": ["3. Good health"]}, "links": [{"href": "https://doi.org/10.33140/jgrm.07.02.03"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Journal%20of%20Gynecology%20%26amp%3B%20Reproductive%20Medicine", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.33140/jgrm.07.02.03", "name": "item", "description": "10.33140/jgrm.07.02.03", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.33140/jgrm.07.02.03"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-04-17T00:00:00Z"}}, {"id": "10.3389/fagro.2022.841086", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:42Z", "type": "Journal Article", "created": "2022-03-07", "title": "Laser Weeding with Small Autonomous Vehicles: Friends or Foes?", "description": "

Weed control is necessary to ensure a high crop yield with good quality. Herbicide application and mechanical weeding are the most common methods worldwide. The use of herbicides has led to the increasing occurrence of herbicide-resistant weeds and unwanted contamination of the environment. Mechanical weed control harms beneficial organisms, increases the degradation of organic matter, may dry out the soil, and stimulate new cohorts of weed seeds to germinate. Therefore, there is a need to develop more sustainable weed control means. We suggest using small autonomous vehicles equipped with lasers as a sustainable alternative method. Laser beams are based on electricity, which can be produced from non-fossil fuels. Deep learning methods can be used to locate and identify weed and crop plants for targeting and delivery of laser energy with robotic actuators. Given the targeted nature of laser beams, the area exposed for weed control can be reduced substantially compared to commonly used weed control methods. Therefore, the risk of affecting non-target organisms is minimized, and the soil will be kept untouched in the field, avoiding triggering weed seeds to germinate. Small autonomous vehicles may have limited weeding capacity, and precautions need to be taken as reflections from the laser beam can be harmful to humans and animals. In this paper, we discuss the pros and cons of replacing or supplementing common used weed control methods with laser weeding. The ability to use laser weeding technology is relatively new and not yet widely practiced or commercially available. Therefore, we do not discuss and compare the costs of the various methods at this early stage of the development of the technology.

", "keywords": ["2. Zero hunger", "S", "alternative weed control", " integrated weed management", " non-chemical weed control", " site-specific weed management", " thermal weed control", " weed killers", "non-chemical weed control", "Plant culture", "Agriculture", "04 agricultural and veterinary sciences", "15. Life on land", "SB1-1110", "thermal weed control", "integrated weed management", "13. Climate action", "site-specific weed management", "0401 agriculture", " forestry", " and fisheries", "weed killers", "alternative weed control"], "contacts": [{"organization": "Andreasen Christian, Scholle Karsten, Saberi Mahin,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.3389/fagro.2022.841086"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fagro.2022.841086", "name": "item", "description": "10.3389/fagro.2022.841086", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fagro.2022.841086"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-03-07T00:00:00Z"}}, {"id": "10.3389/fmicb.2016.01446", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:44Z", "type": "Journal Article", "created": "2016-09-14", "description": "Soil management is fundamental to all agricultural systems and fertilization practices have contributed substantially to the impressive increases in food production. Despite the pivotal role of soil microorganisms in agro-ecosystems, we still have a limited understanding of the complex response of the soil microbiota to organic and mineral fertilization in the very long-term. Here, we report the effects of different fertilization regimes (mineral, organic and combined mineral and organic fertilization), carried out for more than a century, on the structure and activity of the soil microbiome. Organic matter content, nutrient concentrations, and microbial biomass carbon were significantly increased by mineral, and even more strongly by organic fertilization. Pyrosequencing revealed significant differences between the structures of bacterial and fungal soil communities associated to each fertilization regime. Organic fertilization increased bacterial diversity, and stimulated microbial groups (Firmicutes, Proteobacteria, and Zygomycota) that are known to prefer nutrient-rich environments, and that are involved in the degradation of complex organic compounds. In contrast, soils not receiving manure harbored distinct microbial communities enriched in oligotrophic organisms adapted to nutrient-limited environments, as Acidobacteria. The fertilization regime also affected the relative abundances of plant beneficial and detrimental microbial taxa, which may influence productivity and stability of the agroecosystem. As expected, the activity of microbial exoenzymes involved in carbon, nitrogen, and phosphorous mineralization were enhanced by both types of fertilization. However, in contrast to comparable studies, the highest chitinase and phosphatase activities were observed in the solely mineral fertilized soil. Interestingly, these two enzymes showed also a particular high biomass-specific activities and a strong negative relation with soil pH. As many soil parameters are known to change slowly, the particularity of unchanged fertilization treatments since 1902 allows a profound assessment of linkages between management and abiotic as well as biotic soil parameters. Our study revealed that pH and TOC were the majors, while nitrogen and phosphorous pools were minors, drivers for structure and activity of the soil microbial community. Due to the long-term treatments studied, our findings likely represent permanent and stable, rather than transient, responses of soil microbial communities to fertilization.", "keywords": ["Soil nutrients", "0301 basic medicine", "2. Zero hunger", "0303 health sciences", "long-term fertilization", "microbial biomass", "15. Life on land", "microbial activity", "Microbiology", "QR1-502", "03 medical and health sciences", "13. Climate action", "soil microbial communities", "soil nutrients", "454 pyrosequencing"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2016.01446"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2016.01446", "name": "item", "description": "10.3389/fmicb.2016.01446", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2016.01446"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-14T00:00:00Z"}}, {"id": "10.3389/fmicb.2019.02597", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:45Z", "type": "Journal Article", "created": "2019-11-08", "title": "New Insights Into Cinnamoyl Esterase Activity of Oenococcus oeni.", "description": "Some strains of Oenococcus oeni possess cinnamoyl esterase activity that can be relevant in the malolactic stage of wine production liberating hydroxycinnamic acids that are precursors of volatile phenols responsible for sensory faults. The objective of this study was to better understand the basis of the differential activity between strains. After initial screening, five commercial strains of O. oeni were selected, three were found to exhibit cinnamoyl esterase activity (CE+) and two not (CE-). Although the use of functional annotation of genes revealed genotypic variations between the strains, no specific genes common only to the three CE+ strains could explain the different activities. Pasteurized wine was used as a natural source of tartrate esters in growth and metabolism experiments conducted in MRS medium, whilst commercial trans-caftaric acid was used as substrate for enzyme assays. Detoxification did not seem to be the main biological mechanism involved in the activity since unlike its phenolic cleavage products and their immediate metabolites (trans-caffeic acid and 4-ethylcatechol), trans-caftaric acid was not toxic toward O. oeni. In the case of the two CE+ strains OenosTM and CiNeTM, wine-exposed samples showed a more rapid degradation of trans-caftaric acid than the unexposed ones. The CE activity was present in all cell-free extracts of both wine-exposed and unexposed strains, except in the cell-free extracts of the CE- strain CH11TM. This activity may be constitutive rather than induced by exposure to tartrate esters. Trans-caftaric acid was totally cleaved to trans-caffeic acid by cell-free extracts of the three CE+ strains, whilst cell-free extracts of the CE- strain CH16TM showed significantly lower activity, although higher for the strains in experiments with no prior wine exposure. The EstB28 esterase gene, found in the genomes of the 5 strains, did not reveal any difference on the upstream regulation and transport functionality between the strains. This study highlights the complexity of the basis of this activity in wine related O. oeni population. Variable cinnamoyl esterases or/and membrane transport activities in the O. oeni strains analyzed and a possible implication of wine molecules could explain this phenomenon.", "keywords": ["0301 basic medicine", "0303 health sciences", "tartrate esters", "cinnamoyl esterase", "Tartrate esters", "Hydroxycinnamic acids", "Wine", "hydroxycinnamic acids", "[SDV.IDA] Life Sciences [q-bio]/Food engineering", "Microbiology", "QR1-502", "03 medical and health sciences", "Cinnamoyl esterase", "wine", "Oenococcus oeni"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2019.02597"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2019.02597", "name": "item", "description": "10.3389/fmicb.2019.02597", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2019.02597"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-11-08T00:00:00Z"}}, {"id": "10.3389/fpls.2017.01892", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:46Z", "type": "Journal Article", "created": "2017-11-06", "title": "Variability in Susceptibility to Anthracnose in the World Collection of Olive Cultivars of Cordoba (Spain)", "description": "Anthracnose of olive (Olea europaea ssp. europaea L.), caused by Colletotrichum species, is a serious disease causing fruit rot and branch dieback, whose epidemics are highly dependent on cultivar susceptibility and environmental conditions. Over a period of 10 years, there have been three severe epidemics in Andalusia (southern Spain) that allowed us to complete the assessment of the World Olive Germplasm Bank of C\u00f3rdoba, one of the most important cultivar collections worldwide.A total of 308 cultivars from 21 countries were evaluated, mainly Spain (174 cvs.), Syria (29 cvs.), Italy (20 cvs.), Turkey (15 cvs.), and Greece (16 cvs.). Disease assessments were performed using a 0-10 rating scale, specifically developed to estimate the incidence of symptomatic fruit in the tree canopy. Also, the susceptibility of five reference cultivars was confirmed by artificial inoculation. Because of the direct relationship between the maturity of the fruit and their susceptibility to the pathogen, evaluations were performed at the end of fruit ripening, which forced coupling assessments according to the maturity state of the trees. By applying the cluster analysis to the 308 cultivars, these were classified as follows: 66 cvs. highly susceptible (21.4%), 83 cvs. susceptible (26.9%), 66 cvs. moderately susceptible (21.4%), 61 cvs. resistant (19.8%), and 32 cvs. highly resistant (10.4%). Representative cultivars of these five categories are 'Ocal,' 'Lech\u00edn de Sevilla,' 'Arbequina,' 'Picual,' and 'Frantoio,' respectively. With some exceptions, such as cvs. Arbosana, Empeltre and Picual, most of the Spanish cultivars, such as 'Arbequina,' 'Cornicabra,' 'Hojiblanca,' 'Manzanilla de Sevilla,' 'Morisca,' 'Picudo,' 'Farga,' and 'Verdial de Hu\u00e9var' are included in the categories of moderately susceptible, susceptible or highly susceptible. The phenotypic evaluation of anthracnose reaction is a limiting factor for the selection of olive cultivars by farmers, technicians, and breeders.", "keywords": ["0301 basic medicine", "2. Zero hunger", "anthracnose", "0303 health sciences", "Plant culture", "Plant Science", "15. Life on land", "16. Peace & justice", "olive", "diseases", "SB1-1110", "03 medical and health sciences", "fruit rot", "Colletotrichum"], "contacts": [{"organization": "J. R. Viruega, Luis F. Roca, Carlos Xavi\u00e9r, Juan Caballero, Antonio Trapero, Juan Moral, Juan Moral,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.3389/fpls.2017.01892"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Plant%20Science", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fpls.2017.01892", "name": "item", "description": "10.3389/fpls.2017.01892", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fpls.2017.01892"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2017-11-06T00:00:00Z"}}, {"id": "10.3389/fmicb.2022.983823", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:20:46Z", "type": "Journal Article", "created": "2022-11-08", "title": "Long-term effects of early-life rumen microbiota modulation on dairy cow production performance and methane emissions", "description": "

Rumen microbiota modulation during the pre-weaning period has been suggested as means to affect animal performance later in life. In this follow-up study, we examined the post-weaning rumen microbiota development differences in monozygotic twin-heifers that were inoculated (T-group) or not inoculated (C-group) (n\uffe2\uff80\uff89=\uffe2\uff80\uff894 each) with fresh adult rumen liquid during their pre-weaning period. We also assessed the treatment effect on production parameters and methane emissions of cows during their 1st lactation period. The rumen microbiota was determined by the 16S rRNA gene, 18S rRNA gene, and ITS1 amplicon sequencing. Animal weight gain and rumen fermentation parameters were monitored from 2 to 12\uffe2\uff80\uff89months of age. The weight gain was not affected by treatment, but butyrate proportion was higher in T-group in month 3 (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.04). Apart from archaea (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.084), the richness of bacteria (p\uffe2\uff80\uff89&lt;\uffe2\uff80\uff890.0001) and ciliate protozoa increased until month 7 (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.004) and anaerobic fungi until month 11 (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.005). The microbiota structure, measured as Bray\uffe2\uff80\uff93Curtis distances, continued to develop until months 3, 6, 7, and 10, in archaea, ciliate protozoa, bacteria, and anaerobic fungi, respectively (for all: p\uffe2\uff80\uff89=\uffe2\uff80\uff890.001). Treatment or age \uffc3\uff97 treatment interaction had a significant (p\uffe2\uff80\uff89&lt;\uffe2\uff80\uff890.05) effect on 18 bacterial, 2 archaeal, and 6 ciliate protozoan taxonomic groups, with differences occurring mostly before month 4 in bacteria, and month 3 in archaea and ciliate protozoa. Treatment stimulated earlier maturation of prokaryote community in T-group before month 4 and earlier maturation of ciliate protozoa at month 2 (Random Forest: 0.75\uffe2\uff80\uff89month for bacteria and 1.5\uffe2\uff80\uff89month for protozoa). No treatment effect on the maturity of anaerobic fungi was observed. The milk production and quality, feed efficiency, and methane emissions were monitored during cow\uffe2\uff80\uff99s 1st lactation. The T-group had lower variation in energy-corrected milk yield (p\uffe2\uff80\uff89&lt;\uffe2\uff80\uff890.001), tended to differ in pattern of residual energy intake over time (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.069), and had numerically lower somatic cell count throughout their 1st lactation period (p\uffe2\uff80\uff89=\uffe2\uff80\uff890.081), but no differences between the groups in methane emissions (g/d, g/kg DMI, or g/kg milk) were observed. Our results demonstrated that the orally administered microbial inoculant induced transient changes in early rumen microbiome maturation. In addition, the treatment may influence the later production performance, although the mechanisms that mediate these effects need to be further explored.

", "keywords": ["microbiome modulation", "0301 basic medicine", "570", "ta412", "microbiome establishment", "Heifer", "dairy cow", "Rumen function", "Animal science", " dairy science", "Microbiology", "630", "Microbiome modulation", "QR1-502", "rumen function", "Microbiome establishment", "03 medical and health sciences", "Dairy cow", "heifer"]}, "links": [{"href": "https://doi.org/10.3389/fmicb.2022.983823"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Frontiers%20in%20Microbiology", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3389/fmicb.2022.983823", "name": "item", "description": "10.3389/fmicb.2022.983823", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3389/fmicb.2022.983823"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2022-11-08T00:00:00Z"}}, {"id": "10.3390/su12051962", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:07Z", "type": "Journal Article", "created": "2020-03-04", "title": "Transitioning European Protein-Rich Food Consumption and Production towards More Sustainable Patterns\u2014Strategies and Policy Suggestions", "description": "

Global and European diets have shifted towards greater consumption of animal proteins. Recent studies urge reversals of these trends and call for a rapid transition towards adoption of more plant-based diets. This paper explored mechanisms to increase the production and consumption of plant-proteins in Europe by 2030, using participatory backcasting. We identified pathways to the future (strategies), as well as interim milestones, barriers, opportunities and actions, with key European stakeholders in the agri-food chain. Results show that four strategies could be implemented to achieve the desired future: increased research and development, enriched consumer education and awareness, improved and connected supply and value chains and public policy supports. Actions needed to reach milestones were required immediately, reinforcing the need for urgent actions to tackle the protein challenge. This study concretely detailed how idealized dietary futures can be achieved in a real-world context. It can support EU protein transition by informing policy makers and the broader public on potential ways to move towards a more sustainable plant-based future. The outputs of this analysis have the potential to be combined with dietary scenarios to develop more temporally explicit models of future dietary changes and how to reach them.

", "keywords": ["future", "2. Zero hunger", "Agricultura", "pathways", "food security", "01 natural sciences", "stakeholders", "Econom\u00eda", "12. Responsible consumption", "sustainable agriculture", "meat substitutes", "Medio Ambiente", "plant protein", "13. Climate action", "backcasting", "value chain", "meat substitution", "europe", "diet", "plant proteins", "0105 earth and related environmental sciences"]}, "links": [{"href": "http://www.mdpi.com/2071-1050/12/5/1962/pdf"}, {"href": "https://www.mdpi.com/2071-1050/12/5/1962/pdf"}, {"href": "https://doi.org/10.3390/su12051962"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Sustainability", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.3390/su12051962", "name": "item", "description": "10.3390/su12051962", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.3390/su12051962"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2020-03-04T00:00:00Z"}}, {"id": "10.37501/soilsa/193074", "type": "Feature", "geometry": null, "properties": {"license": "Open Access", "updated": "2026-05-01T16:21:13Z", "type": "Journal Article", "created": "2024-11-13", "title": "Rational management of agricultural soils under climate change", "description": "

Zr\u00f3wnowa\u017cone gospodarowanie glebami u\u017cytkowanymi rolniczo ma kluczowe znaczenie dla poprawy ich zdrowia, zwi\u0119kszenia bezpiecze\u0144stwa \u017cywno\u015bciowego, ilo\u015bci i jako\u015bci w\u00f3d powierzchniowych i gruntowych, gromadzenia w\u0119gla organicznego oraz poprawy stanu r\u00f3\u017cnorodno\u015bci biologicznej. Przyczynia si\u0119 tak\u017ce do \u0142agodzenia zmian klimatu i przystosowania si\u0119 rolnictwa do tych zmian. Celem publikacji jest przedstawienie rozwi\u0105za\u0144 dotycz\u0105cych zr\u00f3wnowa\u017conego u\u017cytkowania gleb rolniczych w warunkach zachodz\u0105cych zmian klimatycznych na przyk\u0142adzie realizacji Europejskiego Wsp\u00f3lnego Programu o Glebie (akronim EJP SOIL). EJP SOIL \u201eTowards climate-smart sustainable development of agricultural soils\u201d, w kt\u00f3rym uczestniczy 26 instytucji naukowo badawczych z 24 kraj\u00f3w Europy, rozpocz\u0105\u0142 swoj\u0105 dzia\u0142alno\u015b\u0107 w 2020 r. Rezultaty podejmowanych prac, w tym ankiety, opracowane bazy danych i analizy statystyczne oraz dialog z urz\u0119dnikami r\u00f3\u017cnego szczebla, przez ostatnie lata umo\u017cliwia\u0142y wsp\u00f3\u0142prac\u0119 ponad 400 naukowc\u00f3w w celu uzupe\u0142nienia wiedzy na temat zr\u00f3wnowa\u017conego zarz\u0105dzania glebami rolniczymi z uwzgl\u0119dnieniem stref glebowo\u2012klimatycznych Europy. Publikacja prezentuje wielow\u0105tkowo\u015b\u0107 programu EJP SOIL oraz powi\u0105zane z nim wewn\u0119trze i zewn\u0119trzne projekty badawcze, przedstawia podejmowan\u0105 problematyk\u0119 naukow\u0105 oraz wskazania dla praktyki rolniczej i kszta\u0142towania przysz\u0142ej polityki europejskiej. Ponadto, okre\u015bla kierunek podejmowanych dzia\u0142a\u0144 prowadzonych w ramach realizacji EJP SOIL, kt\u00f3re zosta\u0142y skierowane do r\u00f3\u017cnych grup interesariuszy w zakresie upowszechniania wiedzy o zdrowiu gleb i \u015bwiadczonych przez nie us\u0142ugach ekosystemowych oraz przybli\u017ca cele i zakres funkcjonowania Krajowego Hubu ds. Gleb, powsta\u0142ego w listopadzie 2023 r. z inicjatywy programu EJP SOIL oraz Misji Komisji Europejskiej \u201eTroska o gleb\u0119 to troska o \u017cycie\u201d.

", "contacts": [{"organization": "Smreczak, Bo\u017cena, Hewelke, Edyta Aleksandra, Kowalik, Monika, Ukalska-Jaruga, Aleksandra, Weber, Jerzy,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.37501/soilsa/193074"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Soil%20Science%20Annual", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.37501/soilsa/193074", "name": "item", "description": "10.37501/soilsa/193074", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.37501/soilsa/193074"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-09-07T00:00:00Z"}}, {"id": "10.4081/ija.2012.e26", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:16Z", "type": "Journal Article", "created": "2012-05-31", "description": "Interest in biochar (BC) has grown dramatically in recent years, due mainly to the fact that its incorporation into soil reportedly enhances carbon sequestration and fertility. Currently, BC types most under investigation are those obtained from organic matter (OM) of plant origin. As great amounts of manure solids are expected to become available in the near future, thanks to the development of technologies for the separation of the solid fraction of animal effluents, processing of manure solids for BC production seems an interesting possibility for the recycling of OM of high nutrient value. The aim of this study was to investigate carbon (C) sequestration and nutrient dynamics in soil amended with BC from dried swine manure solids. The experiment was carried out in laboratory microcosms on a silty clay soil. The effect on nutrient dynamics of interaction between BC and fresh digestate obtained from a biogas plant was also investigated to test the hypothesis that BC can retain nutrients. A comparison was made of the following treatments: soil amended with swine manure solids (LC), soil amended with charred swine manure solids (LT), soil amended with wood chip (CC), soil amended with charred wood chip (CT), soil with no amendment as control (Cs), each one of them with and without incorporation of digestate (D) for a total of 10 treatments. Biochar was obtained by treating OM (wood chip or swine manure) with moisture content of less than 10% at 420\u00b0C in anoxic conditions. The CO2-C release and organic C, available phosphorus (P) (Olsen P, POls) and inorganic (ammonium+nitrate) nitrogen (N) (Nmin) contents at the start and three months after the start of the experiment were measured in the amended and control soils. After three months of incubation at 30\u00b0C, the CO2-C emissions from soil with BC (CT and LT, \u00b1D) were the same as those in the control soil (Cs) and were lower than those in the soils with untreated amendments (CC and LC, \u00b1D). The organic C content decreased in CT and LT to a lesser extent than in CC and LC. In soils with D (+D), the CO2-C emissions were equal to or higher than those in soils without (-D). The Nmin content increased in all treatments; the POls content decreased in the +D treatments. The incorporation of BC into soil, by reducing CO2 emissions, actually contributes to C sequestration without modifying N availability for crops. For a given N content, the BC from swine manure solids supplies much more P than the non-treated OM and, therefore, represents an interesting source of P for crops.", "keywords": ["2. Zero hunger", "S", "emissions", "Plant culture", "Agriculture", "04 agricultural and veterinary sciences", "nitrogen", "6. Clean water", "SB1-1110", "13. Climate action", "manure", "0401 agriculture", " forestry", " and fisheries", "biochar", "phosphorus"]}, "links": [{"href": "https://doi.org/10.4081/ija.2012.e26"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Italian%20Journal%20of%20Agronomy", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.4081/ija.2012.e26", "name": "item", "description": "10.4081/ija.2012.e26", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.4081/ija.2012.e26"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-01-01T00:00:00Z"}}, {"id": "10.5061/dryad.1v87f", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:23Z", "type": "Dataset", "title": "Data from: Post-fire changes in forest carbon storage over a 300-year chronosequence of Pinus contorta-dominated forests", "description": "unspecifiedA warming climate may increase the frequency and severity of stand-replacing wildfires, reducing carbon (C) storage in forest ecosystems. Understanding the variability of post-fire C cycling on heterogeneous landscapes is critical for predicting changes in C storage with more frequent disturbance. We measured C pools and fluxes for 77 lodgepole pine (Pinus contorta Dougl. ex Loud var. latifolia Engelm.) stands in and around Yellowstone National Park (YNP) along a 300-year chronosequence to examine how quickly forest C pools recover after a stand-replacing fire, their variability through time across a complex landscape, and the role of stand structure in this variability. Carbon accumulation after fire was rapid relative to the historical mean fire interval of 150-300 years, recovering nearly 80% of pre-fire C in 50 years and 90% within 100 years. Net ecosystem carbon balance (NECB) declined monotonically from 160 g C m-2 yr-1 at age 12 to 5 g C m 2 yr-1 at age 250, but was never negative after disturbance. Decomposition and accumulation of dead wood contributed little to NECB relative to live biomass in this system. Aboveground net primary productivity was correlated with leaf area for all stands, and the decline in aboveground net primary productivity with forest age was related to a decline in both leaf area and growth efficiency. Forest structure was an important driver of ecosystem C, with ecosystem C, live biomass C, and organic soil C varying with basal area or tree density in addition to forest age. Rather than identifying a single chronosequence, we found high variability in many components of ecosystem C stocks through time; a > 50% random subsample of the sampled stands was necessary to reliably estimate the non-linear equation coefficients for ecosystem C. At the spatial scale of YNP, this variability suggests that landscape C develops via many pathways over decades and centuries, with prior stand structure, regeneration, and within-stand disturbance all important. With fire rotation projected to be < 30 years by mid century in response to a changing climate, forests in YNP will store substantially less C (at least 4.8 kg C/m2 or 30% less).", "keywords": ["Pinus contorta var. latifolia", "13. Climate action", "Yellowstone", "lodgepole pine", "net ecosystem carbon balance", "15. Life on land", "Carbon"]}, "links": [{"href": "https://doi.org/10.5061/dryad.1v87f"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.1v87f", "name": "item", "description": "10.5061/dryad.1v87f", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.1v87f"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2012-12-03T00:00:00Z"}}, {"id": "10433/20153", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:24:36Z", "type": "Report", "title": "Atlas mundial de los principales factores que controlan el carbono del suelo en un contexto de cambio clim\u00e1tico.", "description": "El carbono (C) es un componente esencial de la matriz del suelo que juega una funci\u00f3n vital en m\u00faltiples servicios ecosist\u00e9micos, desde la regulaci\u00f3n clim\u00e1tica hasta proporcionar suelos f\u00e9rtiles que permitan la seguridad alimentaria. Sin embargo, el cambio clim\u00e1tico y la gesti\u00f3n inadecuada del manejo del suelo est\u00e1n provocando p\u00e9rdidas aceleradas del C almacenado en los suelos de los ecosistemas terrestres, con repercusiones importantes en el clima de la Tierra. A pesar de su importancia, en la actualidad tenemos un conocimiento escaso sobre los factores que controlan los distintos componentes que forman el C almacenado en el suelo y que est\u00e1n asociados con su persistencia en un contexto de cambio clim\u00e1tico (protecci\u00f3n mineral, diversidad de la materia org\u00e1nica [SOM], recalcitrancia bioqu\u00edmica y respiraci\u00f3n heter\u00f3trofa de los microbios del suelo). En esta tesis, se investigaron los principales factores que influyen en la acumulaci\u00f3n de C a nivel global, mediante la utilizaci\u00f3n de suelos provenientes de varios muestreos estandarizados en todos los biomas terrestres. En primer lugar, nuestros resultados mostraron una menor diversidad de la SOM como consecuencia de la acumulaci\u00f3n de restos vegetales despu\u00e9s de millones de a\u00f1os de formaci\u00f3n ecosist\u00e9mica. Las correlaciones positivas entre la diversidad de la SOM y contenido de C en el suelo sugieren que el desarrollo de suelos milenarios m\u00e1s simples podr\u00eda estar asociado con las p\u00e9rdidas t\u00edpicamente observadas de las funciones ecosist\u00e9micas (incluida la acumulaci\u00f3n de C en el suelo) durante la retrogresi\u00f3n. En este contexto, el desarrollo de las comunidades vegetales es determinado por las condiciones clim\u00e1ticas. Nuestro segundo cap\u00edtulo revel\u00f3 que, independientemente del contenido de nutrientes en la capa superficial del suelo, el reservorio de la biomasa vegetal es mayor cuando las condiciones de temperatura y precipitaci\u00f3n permiten el crecimiento de las plantas. Por otra parte, frente a los bien establecidos mecanismos de persistencia, el microbioma del suelo emergi\u00f3 como el principal factor que controla las p\u00e9rdidas de C a la atm\u00f3sfera en escenarios de calentamiento. De hecho, nuestro cuarto cap\u00edtulo tambi\u00e9n revel\u00f3 que incrementar el n\u00famero de factores de cambio global est\u00e1 relacionado negativamente con el almacenamiento y los factores de persistencia del C a nivel global. Por \u00faltimo, propusimos que nuevas herramientas basadas en un enfoque microbiano podr\u00edan mejorar la diversidad de la SOM en tierras degradadas, y, por consiguiente, incrementar las reservas mundiales de C en el menor tiempo posible. En conjunto, los resultados presentados en esta tesis aportan informaci\u00f3n valiosa para orientar nuestros esfuerzos hacia medidas de gesti\u00f3n concretas y efectivas destinadas a construir y preservar el C en los ecosistemas terrestres.", "keywords": ["Carbono", "Cambio clim\u00e1tico", "Microbiolog\u00eda"], "contacts": [{"organization": "S\u00e1ez Sandino, Tadeo", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10433/20153"}, {"rel": "self", "type": "application/geo+json", "title": "10433/20153", "name": "item", "description": "10433/20153", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10433/20153"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-01-01T00:00:00Z"}}, {"id": "10.5061/dryad.3sm0340", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:24Z", "type": "Dataset", "title": "Data from: Vegetation type controls root turnover in global grasslands", "description": "unspecifiedRoot turnover in grasslands", "keywords": ["2. Zero hunger", "13. Climate action", "15. Life on land"], "contacts": [{"organization": "Wang, Jinsong, Sun, Jian, Yu, Zhen, Li, Yong, Tian, Dashuan, Wang, Bingxue, Li, Zhaolei, Niu, Shuli,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.3sm0340"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.3sm0340", "name": "item", "description": "10.5061/dryad.3sm0340", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.3sm0340"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2019-08-15T00:00:00Z"}}, {"id": "10.5061/dryad.cz8w9gj78", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:28Z", "type": "Dataset", "title": "Soil microbial relative resource limitation exhibited contrasting seasonal patterns along an elevational gradient in Yulong snow mountain", "description": "unspecified", "keywords": ["2. Zero hunger", "mountain ecosystems", "13. Climate action", "microbial metabolic mechanisms", "microbial relative C limitation", "microbial relative P limitation", "C use efficiency", "FOS: Earth and related environmental sciences", "15. Life on land", "elevations"], "contacts": [{"organization": "Zhang, Dandan, Wu, Baoyun, Li, Jinsheng, Cheng, Xiaoli,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.cz8w9gj78"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.cz8w9gj78", "name": "item", "description": "10.5061/dryad.cz8w9gj78", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.cz8w9gj78"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2023-02-02T00:00:00Z"}}, {"id": "10.5061/dryad.h3r16", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:30Z", "type": "Dataset", "title": "Data from: The impact of environmental heterogeneity and life stage on the hindgut microbiota of Holotrichia parallela larvae (Coleoptera: Scarabaeidae)", "description": "unspecifiedGut microbiota has diverse ecological and evolutionary effects on their hosts. However, the ways in which it responds to environmental heterogeneity and host physiology remain poorly understood. To this end, we surveyed intestinal microbiota of Holotrichia parallela larvae at different instars and from different geographic regions. Bacterial 16S rRNA gene clone libraries were constructed and clones were subsequently screened by DGGE and sequenced. Firmicutes and Proteobacteria were the major phyla, and bacteria belonging to Ruminococcaceae, Lachnospiraceae, Enterobacteriaceae, Desulfovibrionaceae and Rhodocyclaceae families were commonly found in all natural populations. However, bacterial diversity (Chao1 and Shannon indices) and community structure varied across host populations, and the observed variation can be explained by soil pH, organic carbon and total nitrogen, and the climate factors (e.g., mean annual temperature) of the locations where the populations were sampled. Furthermore, increases in the species richness and diversity of gut microbiota were observed during larval growth. Bacteroidetes comprised the dominant group in the first instar; however, Firmicutes composed the majority of the hindgut microbiota during the second and third instars. Our results suggest that the gut\u2019s bacterial community changes in response to environmental heterogeneity and host\u2019s physiology, possibly to meet the host\u2019s ecological needs or physiological demands.", "keywords": ["Holotrichia parallela", "Cenozoic era", "15. Life on land"], "contacts": [{"organization": "Huang, Shengwei, Zhang, Hongyu,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.h3r16"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.h3r16", "name": "item", "description": "10.5061/dryad.h3r16", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.h3r16"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2013-05-20T00:00:00Z"}}, {"id": "10.5061/dryad.pb271", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:32Z", "type": "Dataset", "title": "Data from: Interactions among roots, mycorrhizae and free-living microbial communities differentially impact soil carbon processes", "description": "unspecifiedPlant roots, their associated microbial community and free-living soil microbes interact to regulate the movement of carbon from the soil to the atmosphere, one of the most important and least understood fluxes of terrestrial carbon. Our inadequate understanding of how plant\u2013microbial interactions alter soil carbon decomposition may lead to poor model predictions of terrestrial carbon feedbacks to the atmosphere. Roots, mycorrhizal fungi and free-living soil microbes can alter soil carbon decomposition through exudation of carbon into soil. Exudates of simple carbon compounds can increase microbial activity because microbes are typically carbon limited. When both roots and mycorrhizal fungi are present in the soil, they may additively increase carbon decomposition. However, when mycorrhizas are isolated from roots, they may limit soil carbon decomposition by competing with free-living decomposers for resources. We manipulated the access of roots and mycorrhizal fungi to soil in situ in a temperate mixed deciduous forest. We added 13C-labelled substrate to trace metabolized carbon in respiration and measured carbon-degrading microbial extracellular enzyme activity and soil carbon pools. We used our data in a mechanistic soil carbon decomposition model to simulate and compare the effects of root and mycorrhizal fungal presence on soil carbon dynamics over longer time periods. Contrary to what we predicted, root and mycorrhizal biomass did not interact to additively increase microbial activity and soil carbon degradation. The metabolism of 13C-labelled starch was highest when root biomass was high and mycorrhizal biomass was low. These results suggest that mycorrhizas may negatively interact with the free-living microbial community to influence soil carbon dynamics, a hypothesis supported by our enzyme results. Our steady-state model simulations suggested that root presence increased mineral-associated and particulate organic carbon pools, while mycorrhizal fungal presence had a greater influence on particulate than mineral-associated organic carbon pools. Synthesis. Our results suggest that the activity of enzymes involved in organic matter decomposition was contingent upon root\u2013mycorrhizal\u2013microbial interactions. Using our experimental data in a decomposition simulation model, we show that root\u2013mycorrhizal\u2013microbial interactions may have longer-term legacy effects on soil carbon sequestration. Overall, our study suggests that roots stimulate microbial activity in the short term, but contribute to soil carbon storage over longer periods of time.", "keywords": ["2. Zero hunger", "roots", "13. Climate action", "simulation model", "carbon dynamics", "Rhizosphere", "stable isotope", "plant-soil (belowground) interactions", "15. Life on land", "extra-cellular enzyme activity", "mycorrhizae"], "contacts": [{"organization": "Moore, Jessica A. M., Jiang, Jiang, Patterson, Courtney M., Wang, Gangsheng, Mayes, Melanie A., Classen, Aim\u00e9e T.,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.pb271"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.pb271", "name": "item", "description": "10.5061/dryad.pb271", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.pb271"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2016-09-14T00:00:00Z"}}, {"id": "10.5061/dryad.wh70rxwww", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:34Z", "type": "Dataset", "created": "2024-06-19", "title": "Data from: Competition between mixo- and heterotrophic ciliates under dynamic resource supply", "description": "unspecifiedThe outcome of species competition strongly depends on the traits of the competitors and associated trade-offs, as well as on environmental variability. Here we investigate the relevance of consumer trait variation for species coexistence in a ciliate consumer \u2013 microalgal prey system under fluctuating regimes of resource supply. We focus on consumer competition and feeding traits, and specifically on the consumer\u2019s ability to overcome periods of resource limitation by mixotrophy, i. e. the ability of photosynthetic carbon fixation via algal symbionts in addition to phagotrophy. In a 48-day chemostat experiment, we investigated competitive interactions of different heterotrophic and mixotrophic ciliates of the genera Euplotes and Coleps under different resource regimes, providing prey either continuously or in pulses under constant or fluctuating light, entailing periods of resource depletion in fluctuating environments, but overall providing the same amount of prey and light. Although ultimate competition results remained unaffected, population dynamics of mixotrophic and heterotrophic ciliates were significantly altered by resource supply mode. However, the effects differed among species combinations and changed over time. Whether mixotrophs or heterotrophs dominated in competition strongly depended on the genera of the competing species and thus species-specific differences in the minimum resource requirements that are associated with feeding on shared prey, nutrient uptake, light harvesting and access to additional resources such as bacteria. Potential differences in the curvature of the species\u2019 resource-dependent growth functions may have further mediated the species-specific responses to the different resource supply modes. Overall, our study demonstrates that genus- or species-specific traits other than related to nutritional mode may override the relevance of acquired phototrophy by heterotrophs in competitive interactions, and that the potential advantage of photosynthetic carbon fixation of symbiont-bearing mixotrophs in competition with pure heterotrophs may differ greatly among different mixotrophs, playing out under different environmental conditions and depending on the specific requirements of the species. Complex trophic interactions determine the outcome of competition, which can only be understood by taking on a multidimensional trait perspective.", "keywords": ["Ciliates", "mixotrophy", "FOS: Biological sciences", "coexistence", "resource fluctuations", "microalgae-ciliate symbiosis"], "contacts": [{"organization": "Fl\u00f6der, Sabine, Klauschies, Toni, Klaassen, Moritz, Stoffers, Tjardo, Lambrecht, Max, Moorthi, Stefanie,", "roles": ["creator"]}]}, "links": [{"href": "https://doi.org/10.5061/dryad.wh70rxwww"}, {"rel": "self", "type": "application/geo+json", "title": "10.5061/dryad.wh70rxwww", "name": "item", "description": "10.5061/dryad.wh70rxwww", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5061/dryad.wh70rxwww"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2024-06-23T00:00:00Z"}}, {"id": "10.5194/acp-10-7017-2010", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:36Z", "type": "Journal Article", "created": "2010-04-29", "description": "

Abstract. We present and discuss a new dataset of gridded emissions covering the historical period (1850\uffe2\uff80\uff932000) in decadal increments at a horizontal resolution of 0.5\uffc2\uffb0 in latitude and longitude. The primary purpose of this inventory is to provide consistent gridded emissions of reactive gases and aerosols for use in chemistry model simulations needed by climate models for the Climate Model Intercomparison Program #5 (CMIP5) in support of the Intergovernmental Panel on Climate Change (IPCC) Fifth Assessment Report (AR5). Our best estimate for the year 2000 inventory represents a combination of existing regional and global inventories to capture the best information available at this point; 40 regions and 12 sectors are used to combine the various sources. The historical reconstruction of each emitted compound, for each region and sector, is then forced to agree with our 2000 estimate, ensuring continuity between past and 2000 emissions. Simulations from two chemistry-climate models is used to test the ability of the emission dataset described here to capture long-term changes in atmospheric ozone, carbon monoxide and aerosol distributions. The simulated long-term change in the Northern mid-latitudes surface and mid-troposphere ozone is not quite as rapid as observed. However, stations outside this latitude band show much better agreement in both present-day and long-term trend. The model simulations indicate that the concentration of carbon monoxide is underestimated at the Mace Head station; however, the long-term trend over the limited observational period seems to be reasonably well captured. The simulated sulfate and black carbon deposition over Greenland is in very good agreement with the ice-core observations spanning the simulation period. Finally, aerosol optical depth and additional aerosol diagnostics are shown to be in good agreement with previously published estimates and observations.

", "keywords": ["info:eu-repo/classification/ddc/550", "550", "IPCC", "[SDE.MCG]Environmental Sciences/Global Changes", "Physics", "QC1-999", "emissions", "551", "01 natural sciences", "7. Clean energy", "J", "[SDE.MCG] Environmental Sciences/Global Changes", "Chemistry", "13. Climate action", "[SDE.ES] Environmental Sciences/Environment and Society", "CMIP5", "[SDE.ES]Environmental Sciences/Environment and Society", "QD1-999", "AR5", "0105 earth and related environmental sciences"]}, "links": [{"href": "https://pure.iiasa.ac.at/id/eprint/9279/1/acp-10-7017-2010.pdf"}, {"href": "http://pure.iiasa.ac.at/id/eprint/9279/1/acp-10-7017-2010.pdf"}, {"href": "https://doi.org/10.5194/acp-10-7017-2010"}, {"rel": "related", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/Atmospheric%20Chemistry%20and%20Physics", "name": "related record", "description": "related record", "type": "application/json"}, {"rel": "self", "type": "application/geo+json", "title": "10.5194/acp-10-7017-2010", "name": "item", "description": "10.5194/acp-10-7017-2010", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main/items/10.5194/acp-10-7017-2010"}, {"rel": "collection", "type": "application/json", "title": "Collection", "name": "collection", "description": "Collection", "href": "https://repository.soilwise-he.eu/cat/collections/metadata:main"}], "time": {"date": "2010-02-19T00:00:00Z"}}, {"id": "10.5194/bg-15-1933-2018", "type": "Feature", "geometry": null, "properties": {"updated": "2026-05-01T16:21:39Z", "type": "Journal Article", "created": "2017-11-21", "title": "Straw incorporation increases crop yield and soil organic carbon sequestration but varies under different natural conditions and farming practices in China: a system analysis", "description": "

Abstract. Loss of soil organic carbon (SOC) from agricultural soils is a key indicator of soil degradation associated with reductions in net primary productivity in crop production systems worldwide. Simple technical and locally appropriate solutions are required for farmers to increase SOC and to improve cropland management. In the last 30 years, straw incorporation has gradually been implemented across China in the context of agricultural intensification and rural livelihood improvement. A meta-analysis of data published before the end of 2016 was undertaken to investigate the effects of straw incorporation on crop production and SOC sequestration. The results of 68 experimental studies throughout China in different edaphic, climate regions and under different farming regimes were analyzed. Compared with straw removal, straw incorporation significantly sequestered SOC (0\uffe2\uff80\uff9320\uffe2\uff80\uff89cm depth) at the rate of 0.35 (range 0.31\uffe2\uff80\uff930.40)\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921, increased crop grain yield by 13.4\uffe2\uff80\uff89% (range 9.3\uffe2\uff80\uff89%\uffe2\uff80\uff9318.4\uffe2\uff80\uff89%) and had a conversion efficiency of the applied straw-C as 16\uffe2\uff80\uff89%\uffe2\uff80\uff89\uffc2\uffb1\uffe2\uff80\uff892\uffe2\uff80\uff89% across the whole of China. The combined straw incorporation at the rate of 3\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921 with mineral fertilizer of 200\uffe2\uff80\uff93400\uffe2\uff80\uff89kg N\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921 was demonstrated to be the best combination for farmers to use with crop yield increased by 32.7\uffe2\uff80\uff89% (range 17.9\uffe2\uff80\uff89%\uffe2\uff80\uff9356.4\uffe2\uff80\uff89%) and SOC sequestrated by the rate of 0.85 (range 0.54\uffe2\uff80\uff931.15)\uffe2\uff80\uff89Mg C\uffe2\uff80\uff89ha\uffe2\uff88\uff921\uffe2\uff80\uff89yr\uffe2\uff88\uff921. Straw incorporation achieved higher SOC sequestration rate and crop yield increment when applied to clay soils, under high cropping intensities, and in areas like Northeast China where the soil is being degraded. SOC responses were the greatest in the initial starting phase of straw incorporation and then declined and finally were negligible after 28\uffe2\uff80\uff9362 years, however, crop yield responses were initially low and then increased reaching their highest level at 11\uffe2\uff80\uff9315 years after straw incorporation. Overall, our study confirmed that straw incorporation did create a positive feedback loop of SOC enhancement together with increased crop production, and this is of great practical significance to straw management as agricultural intensifies in China and other regions in the world with different climate conditions.

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